changes in export_example_pages.py as well as removing unused imports in table_parsing.py
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@ -1,16 +1,19 @@
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from functools import partial
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from functools import partial
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from itertools import chain, starmap
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from itertools import chain, starmap
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from operator import attrgetter
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from operator import attrgetter
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from os.path import join
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import cv2
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import cv2
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import numpy as np
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import numpy as np
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from pdf2image import pdf2image
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from pdf2image import pdf2image
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from cv_analysis.utils.display import show_mpl
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from cv_analysis.utils.display import show_mpl
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from cv_analysis.utils.draw import draw_rectangles
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from cv_analysis.utils.draw import draw_rectangles
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from cv_analysis.utils.post_processing import xywh_to_vecs, xywh_to_vec_rect, adjacent1d
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from cv_analysis.utils.post_processing import xywh_to_vecs, xywh_to_vec_rect, adjacent1d
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from cv_analysis.utils.deskew import deskew_histbased
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from cv_analysis.utils.deskew import deskew_histbased, deskew
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from cv_analysis.utils.filters import is_large_enough
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from cv_analysis.utils.filters import is_large_enough
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from cv_analysis.utils.visual_logging import vizlogger
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from cv_analysis.utils.visual_logging import vizlogger
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from cv_analysis.layout_parsing import parse_layout
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from cv_analysis.layout_parsing import parse_layout
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@ -26,12 +29,12 @@ def add_external_contours(image, img):
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def extend_lines():
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def extend_lines():
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#TODO
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# TODO
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pass
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pass
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def make_table_block_mask():
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def make_table_block_mask():
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#TODO
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# TODO
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pass
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pass
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@ -164,8 +167,8 @@ def parse_table(image: np.array, show=False):
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table_layout_boxes = find_table_layout_boxes(image)
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table_layout_boxes = find_table_layout_boxes(image)
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image = isolate_vertical_and_horizontal_components(image)
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image = isolate_vertical_and_horizontal_components(image)
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#image = add_external_contours(image, image)
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# image = add_external_contours(image, image)
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#vizlogger.debug(image, "external_contours_added.png")
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# vizlogger.debug(image, "external_contours_added.png")
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_, _, stats, _ = cv2.connectedComponentsWithStats(~image, connectivity=8, ltype=cv2.CV_32S)
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_, _, stats, _ = cv2.connectedComponentsWithStats(~image, connectivity=8, ltype=cv2.CV_32S)
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@ -198,3 +201,5 @@ def tables_in_image(cropped_image):
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return True, table_rects
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return True, table_rects
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else:
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else:
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return False, None
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return False, None
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@ -1,3 +1,4 @@
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import hashlib
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import os
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import os
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from os import path
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from os import path
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import pandas as pd
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import pandas as pd
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@ -5,7 +6,7 @@ from pdf2image import convert_from_path
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from itertools import chain
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from itertools import chain
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import json
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import json
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from cv_analysis.locations import PDF_FOR_TESTING, TEST_DATA_DIR, PNG_FOR_TESTING, DVC_DATA_DIR, HASHED_PDFS_FOR_TESTING
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from cv_analysis.locations import PDF_FOR_TESTING, TEST_DATA_DIR, PNG_FOR_TESTING, DVC_DATA_DIR, HASHED_PDFS_FOR_TESTING
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from cv_analysis.utils.deduplicate_pdfs import hash_pdf_files
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def read_json(path):
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def read_json(path):
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with open(path, encoding='utf-8') as file:
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with open(path, encoding='utf-8') as file:
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@ -13,23 +14,6 @@ def read_json(path):
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return data
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return data
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# def collect_metadata(example_pages, save=False):
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# metadata = []
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# i = 0
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# for name, document_sections in example_pages.items():
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# for pages in document_sections:
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# span = list(range(pages[0], pages[1] + 1))
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# for page_nr in span:
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# metadata.append(["fig_table" + str(i), name, page_nr])
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# i += 1
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# if save:
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# df = pd.DataFrame(data=metadata, columns=["image_name", "pdf_name", "page"])
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# df.to_csv("/exported_files/test_pages.csv")
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# else:
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# return pd.DataFrame(data=metadata, columns=["image_name", "pdf_name", "page"])
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def collect_metadata(example_pages, save=False):
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def collect_metadata(example_pages, save=False):
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metadata = []
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metadata = []
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make_metadata_entry = make_metadata_entry_maker()
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make_metadata_entry = make_metadata_entry_maker()
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@ -73,8 +57,21 @@ def split_pdf(example_pages):
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image.save(fp=fp, dpi=(300, 300))
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image.save(fp=fp, dpi=(300, 300))
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i += 1
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i += 1
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def rename_files_with_hash(example_pages, hashes):
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def find_hash(file_path):
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BLOCK_SIZE = 65536
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file_hash = hashlib.sha256()
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with open(file_path, 'rb') as f:
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fb = f.read(BLOCK_SIZE)
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while len(fb) > 0:
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file_hash.update(fb)
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fb = f.read(BLOCK_SIZE)
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return file_hash.hexdigest()
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def rename_files_with_hash(example_pages):
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files_to_rename = list(example_pages.keys())
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files_to_rename = list(example_pages.keys())
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folder = HASHED_PDFS_FOR_TESTING
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folder = HASHED_PDFS_FOR_TESTING
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@ -88,9 +85,9 @@ def rename_files_with_hash(example_pages, hashes):
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only_name = path.splitext(file)[0]
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only_name = path.splitext(file)[0]
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# Adding the new name with extension
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# Adding the new name with extension
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new_base = only_name + '_new' + '.txt'
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hash = find_hash(old_name)
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# construct full file path
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# construct full file path
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new_name = path.join(folder, new_base)
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new_name = path.join(folder, hash + ".pdf")
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# Renaming the file
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# Renaming the file
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os.rename(old_name, new_name)
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os.rename(old_name, new_name)
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@ -99,17 +96,12 @@ def rename_files_with_hash(example_pages, hashes):
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res = os.listdir(folder)
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res = os.listdir(folder)
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print(res)
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print(res)
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def hash_pdfs(example_pages):
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pdf_paths = list(path.join(PDF_FOR_TESTING, pdf_name) for pdf_name in example_pages.keys())
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hashes = hash_pdf_files(paths=pdf_paths, verbose=0)
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example_pages = dict(zip(hashes, example_pages.values()))
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return example_pages
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def main():
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def main():
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examples_pages = read_json(path.join(TEST_DATA_DIR, "example_pages.json"))
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examples_pages = read_json(path.join(TEST_DATA_DIR, "example_pages.json"))
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# examples_pages = hash_pdfs(examples_pages)
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rename_files_with_hash(examples_pages)
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collect_metadata(examples_pages, save=True)
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#collect_metadata(examples_pages, save=True)
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split_pdf(examples_pages)
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#split_pdf(examples_pages)
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if __name__ == "__main__":
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if __name__ == "__main__":
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