Merge in RR/image-prediction from RED-6084-adhoc-scanned-pages-filtering-refactoring to master
Squashed commit of the following:
commit bd6d83e7363b1c1993babcceb434110a6312c645
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Thu Feb 9 16:08:25 2023 +0100
Tweak logging
commit 55bdd48d2a3462a8b4a6b7194c4a46b21d74c455
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Thu Feb 9 15:47:31 2023 +0100
Update dependencies
commit 970275b25708c05e4fbe78b52aa70d791d5ff17a
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Thu Feb 9 15:35:37 2023 +0100
Refactoring
Make alpha channel check monadic to streamline error handling
commit e99e97e23fd8ce16f9a421d3e5442fccacf71ead
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Tue Feb 7 14:32:29 2023 +0100
Refactoring
- Rename
- Refactor image extraction functions
commit 76b1b0ca2401495ec03ba2b6483091b52732eb81
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Tue Feb 7 11:55:30 2023 +0100
Refactoring
commit cb1c461049d7c43ec340302f466447da9f95a499
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Tue Feb 7 11:44:01 2023 +0100
Refactoring
commit 092069221a85ac7ac19bf838dcbc7ab1fde1e12b
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Tue Feb 7 10:18:53 2023 +0100
Add to-do
commit 3cea4dad2d9703b8c79ddeb740b66a3b8255bb2a
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Tue Feb 7 10:11:35 2023 +0100
Refactoring
- Rename
- Add typehints everywhere
commit 865e0819a14c420bc2edff454d41092c11c019a4
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 19:38:57 2023 +0100
Add type explanation
commit 01d3d5d33f1ccb05aea1cec1d1577572b1a4deaa
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 19:37:49 2023 +0100
Formatting
commit dffe1c18fc3a322a6b08890d4438844e8122faaf
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 19:34:13 2023 +0100
[WIP] Either refactoring
Add alternative formulation for monadic chain
commit 066cf17add404a313520cd794c06e3264cf971c9
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 18:40:30 2023 +0100
[WIP] Either refactoring
commit f53f0fea298cdab88deb090af328b34d37e0198e
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 18:18:34 2023 +0100
[WIP] Either refactoring
Propagate error and metadata
commit 274a5f56d4fcb9c67fac5cf43e9412ec1ab5179e
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 17:51:35 2023 +0100
[WIP] Either refactoring
Fix test assertion
commit 3235a857f6e418e50484cbfff152b0f63efb2f53
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 16:57:31 2023 +0100
[WIP] Either-refactoring
Replace Maybe with Either to allow passing on error information or
metadata which otherwise get sucked up by Nothing.
commit 89989543d87490f8b20a0a76055605d34345e8f4
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 16:12:40 2023 +0100
[WIP] Monadic refactoring
Integrate image validation step into monadic chain.
At the moment we lost the error information through this. Refactoring to
Either monad can bring it back.
commit 022bd4856a51aa085df5fe983fd77b99b53d594c
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 15:16:41 2023 +0100
[WIP] Monadic refactoring
commit ca3898cb539607c8c3dd01c57e60211a5fea8a7d
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 15:10:34 2023 +0100
[WIP] Monadic refactoring
commit d8f37bed5cbd6bdd2a0b52bae46fcdbb50f9dff2
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 15:09:51 2023 +0100
[WIP] Monadic refactoring
commit 906fee0e5df051f38076aa1d2725e52a182ade13
Author: Matthias Bisping <matthias.bisping@axbit.com>
Date: Mon Feb 6 15:03:35 2023 +0100
[WIP] Monadic refactoring
... and 35 more commits
Setup
Build base image
docker build -f Dockerfile_base -t image-prediction-base .
docker build -f Dockerfile -t image-prediction .
Usage
Without Docker
py scripts/run_pipeline.py /path/to/a/pdf
With Docker
Shell 1
docker run --rm --net=host image-prediction
Shell 2
python scripts/pyinfra_mock.py /path/to/a/pdf
Tests
Run for example this command to execute all tests and get a coverage report:
coverage run -m pytest test --tb=native -q -s -vvv -x && coverage combine && coverage report -m
After having built the service container as specified above, you can also run tests in a container as follows:
./run_tests.sh
Message Body Formats
Request Format
The request messages need to provide the fields "dossierId" and "fileId". A request should look like this:
{
"dossierId": "<string identifier>",
"fileId": "<string identifier>"
}
Any additional keys are ignored.
Response Format
Response bodies contain information about the identified class of the image, the confidence of the classification, the position and size of the image as well as the results of additional convenience filters which can be configured through environment variables. A response body looks like this:
{
"dossierId": "debug",
"fileId": "13ffa9851740c8d20c4c7d1706d72f2a",
"data": [...]
}
An image metadata record (entry in "data" field of a response body) looks like this:
{
"classification": {
"label": "logo",
"probabilities": {
"logo": 1.0,
"signature": 1.1599173226749333e-17,
"other": 2.994595513398207e-23,
"formula": 4.352109377281029e-31
}
},
"position": {
"x1": 475.95,
"x2": 533.4,
"y1": 796.47,
"y2": 827.62,
"pageNumber": 6
},
"geometry": {
"width": 57.44999999999999,
"height": 31.149999999999977
},
"alpha": false,
"filters": {
"geometry": {
"imageSize": {
"quotient": 0.05975350599135938,
"tooLarge": false,
"tooSmall": false
},
"imageFormat": {
"quotient": 1.8443017656500813,
"tooTall": false,
"tooWide": false
}
},
"probability": {
"unconfident": false
},
"allPassed": true
}
}
Configuration
A configuration file is located under config.yaml. All relevant variables can be configured via
exporting environment variables.
| Environment Variable | Default | Description |
|---|---|---|
| LOGGING_LEVEL_ROOT | "INFO" | Logging level for log file messages |
| VERBOSE | true | Service prints document processing progress to stdout |
| BATCH_SIZE | 16 | Number of images in memory simultaneously per service instance |
| RUN_ID | "fabfb1f192c745369b88cab34471aba7" | The ID of the mlflow run to load the image classifier from |
| MIN_REL_IMAGE_SIZE | 0.05 | Minimally permissible image size to page size ratio |
| MAX_REL_IMAGE_SIZE | 0.75 | Maximally permissible image size to page size ratio |
| MIN_IMAGE_FORMAT | 0.1 | Minimally permissible image width to height ratio |
| MAX_IMAGE_FORMAT | 10 | Maximally permissible image width to height ratio |
See also: https://git.iqser.com/projects/RED/repos/helm/browse/redaction/templates/image-service-v2