RED-456: Changed to new template
This commit is contained in:
deiflaender
parent
e1a5a7a545
commit
7be44a7f21
@ -17,7 +17,7 @@
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<dependency>
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<groupId>com.iqser.red.service</groupId>
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<artifactId>redaction-service-api-v1</artifactId>
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<version>1.3.3</version>
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<version>1.4.7</version>
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</dependency>
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<dependency>
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<!-- This dependency contains annotations that are used in specifying REST endpoints. -->
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@ -19,6 +19,11 @@
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<artifactId>redaction-report-service-api-v1</artifactId>
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<version>${project.version}</version>
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</dependency>
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<dependency>
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<groupId>com.iqser.red.service</groupId>
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<artifactId>configuration-service-api-v1</artifactId>
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<version>1.3.0</version>
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</dependency>
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<dependency>
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<groupId>org.apache.poi</groupId>
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<artifactId>poi</artifactId>
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@ -10,13 +10,14 @@ import org.springframework.context.annotation.Import;
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import org.springframework.scheduling.annotation.EnableAsync;
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import com.iqser.red.commons.spring.DefaultWebMvcConfiguration;
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import com.iqser.red.service.redaction.report.v1.server.client.LegalBasisMappingClient;
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import com.iqser.red.service.redaction.report.v1.server.settings.RedactionReportSettings;
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@EnableAsync
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@EnableConfigurationProperties(RedactionReportSettings.class)
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@SpringBootApplication(exclude = {SecurityAutoConfiguration.class, ManagementWebSecurityAutoConfiguration.class})
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@Import(DefaultWebMvcConfiguration.class)
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@EnableFeignClients // TODO specify basePackageClasses
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@EnableFeignClients(basePackageClasses = {LegalBasisMappingClient.class})
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public class Application {
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/**
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@ -0,0 +1,10 @@
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package com.iqser.red.service.redaction.report.v1.server.client;
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import org.springframework.cloud.openfeign.FeignClient;
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import com.iqser.red.service.configuration.v1.api.resource.LegalBasisMappingResource;
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import com.iqser.red.service.configuration.v1.api.resource.RulesResource;
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@FeignClient(name = "LegalBasisMappingResource", url = "http://" + RulesResource.SERVICE_NAME + ":8080")
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public interface LegalBasisMappingClient extends LegalBasisMappingResource {
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}
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@ -4,30 +4,41 @@ import java.io.ByteArrayInputStream;
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import java.io.ByteArrayOutputStream;
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import java.io.IOException;
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import java.util.List;
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import java.util.Map;
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import java.util.stream.Collectors;
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import javax.annotation.PostConstruct;
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import org.apache.poi.xwpf.usermodel.XWPFDocument;
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import org.apache.poi.xwpf.usermodel.XWPFParagraph;
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import org.apache.poi.xwpf.usermodel.XWPFRun;
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import org.apache.poi.xwpf.usermodel.XWPFTable;
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import org.apache.poi.xwpf.usermodel.XWPFTableCell;
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import org.apache.poi.xwpf.usermodel.XWPFTableRow;
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import org.springframework.stereotype.Service;
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import com.iqser.red.service.configuration.v1.api.model.LegalBasisMapping;
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import com.iqser.red.service.redaction.report.v1.api.model.MultiFileRedactionLog;
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import com.iqser.red.service.redaction.report.v1.server.client.LegalBasisMappingClient;
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import com.iqser.red.service.redaction.report.v1.server.utils.ResourceLoader;
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import com.iqser.red.service.redaction.v1.model.ManualRedactionType;
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import com.iqser.red.service.redaction.v1.model.Rectangle;
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import com.iqser.red.service.redaction.v1.model.Status;
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import lombok.RequiredArgsConstructor;
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@Service
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@RequiredArgsConstructor
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public class ReportGenerationService {
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private final LegalBasisMappingClient legalBasisMappingClient;
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private byte[] template;
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@PostConstruct
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public void init() {
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template = ResourceLoader.load("templates/Appendix A2.docx");
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template = ResourceLoader.load("templates/EFSA Template 1.docx");
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}
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@ -35,7 +46,8 @@ public class ReportGenerationService {
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try (ByteArrayInputStream is = new ByteArrayInputStream(template)) {
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XWPFDocument doc = new XWPFDocument(is);
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addTableRows(doc, multiFileRedactionLog);
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LegalBasisMapping legalBasisMapping = legalBasisMappingClient.getLegalBasisMapping();
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addTableRows(doc, multiFileRedactionLog, legalBasisMapping.getReasonByLegalBasis());
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return toByteArray(doc);
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} catch (IOException e) {
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throw new RuntimeException(e);
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@ -43,17 +55,34 @@ public class ReportGenerationService {
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}
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private void addTableRows(XWPFDocument doc, MultiFileRedactionLog multiFileRedactionLog) {
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private void addTableRows(XWPFDocument doc, MultiFileRedactionLog multiFileRedactionLog,
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Map<String, String> reasonByLegalBasis) {
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XWPFTable table = doc.getTables().get(1);
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XWPFTable table = doc.getTables().get(0);
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multiFileRedactionLog.getRedactionLogs().forEach(fileRedactionLog -> {
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fileRedactionLog.getRedactionLogEntry().forEach(redactionLogEntry -> {
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if (redactionLogEntry.isRedacted()) {
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if (redactionLogEntry.isManual() && !redactionLogEntry.getStatus().equals(Status.APPROVED)) {
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XWPFTableRow singelColumnRow = table.createRow();
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singelColumnRow.getCell(3).getCTTc().newCursor().removeXml();
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singelColumnRow.getCell(2).getCTTc().newCursor().removeXml();
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singelColumnRow.getCell(1).getCTTc().newCursor().removeXml();
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setText(singelColumnRow.getCell(0), fileRedactionLog.getFilename());
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fileRedactionLog.getRedactionLogEntry().forEach(entry -> {
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if (entry.isRedacted()) {
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if (entry.isManual() && entry.getManualRedactionType()
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.equals(ManualRedactionType.ADD) && !entry.getStatus().equals(Status.APPROVED)) {
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return;
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}
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List<Integer> pages = redactionLogEntry.getPositions()
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if (entry.isManual() && entry.getManualRedactionType()
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.equals(ManualRedactionType.REMOVE) && entry.getStatus().equals(Status.APPROVED)) {
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return;
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}
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List<Integer> pages = entry.getPositions()
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.stream()
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.map(Rectangle::getPage)
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.distinct()
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@ -61,10 +90,10 @@ public class ReportGenerationService {
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.collect(Collectors.toList());
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pages.forEach(page -> {
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XWPFTableRow row = table.createRow();
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row.getCell(0).setText(fileRedactionLog.getFilename());
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row.getCell(1).setText(String.valueOf(page));
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row.getCell(2).setText(redactionLogEntry.getSection());
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row.getCell(3).setText(redactionLogEntry.getReason() + "; " + redactionLogEntry.getLegalBasis());
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setText(row.getCell(0), String.valueOf(page));
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setText(row.getCell(1), entry.getSection());
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setText(row.getCell(2), entry.getLegalBasis());
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setText(row.getCell(3), reasonByLegalBasis.get(entry.getLegalBasis()));
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});
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}
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});
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@ -73,6 +102,17 @@ public class ReportGenerationService {
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}
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private void setText(XWPFTableCell cell, String value) {
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cell.setVerticalAlignment(XWPFTableCell.XWPFVertAlign.CENTER);
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cell.removeParagraph(0);
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XWPFParagraph addParagraph = cell.addParagraph();
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XWPFRun run = addParagraph.createRun();
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run.setFontSize(10);
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run.setText(value);
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}
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private byte[] toByteArray(XWPFDocument doc) throws IOException {
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try (ByteArrayOutputStream byteArrayOutputStream = new ByteArrayOutputStream()) {
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Binary file not shown.
Binary file not shown.
@ -1,5 +1,6 @@
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package com.iqser.red.service.redaction.report.v1.server;
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import static org.mockito.Mockito.when;
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import static org.springframework.boot.test.context.SpringBootTest.WebEnvironment.DEFINED_PORT;
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import java.io.FileOutputStream;
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@ -10,12 +11,15 @@ import org.junit.Test;
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import org.junit.runner.RunWith;
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import org.springframework.beans.factory.annotation.Autowired;
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import org.springframework.boot.test.context.SpringBootTest;
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import org.springframework.boot.test.mock.mockito.MockBean;
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import org.springframework.core.io.ClassPathResource;
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import org.springframework.test.context.junit4.SpringRunner;
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import com.fasterxml.jackson.databind.ObjectMapper;
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import com.iqser.red.service.configuration.v1.api.model.LegalBasisMapping;
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import com.iqser.red.service.redaction.report.v1.api.model.MultiFileRedactionLog;
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import com.iqser.red.service.redaction.report.v1.api.model.ReportResult;
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import com.iqser.red.service.redaction.report.v1.server.client.LegalBasisMappingClient;
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import com.iqser.red.service.redaction.report.v1.server.controller.RedactionReportController;
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import com.iqser.red.service.redaction.v1.model.RedactionLog;
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@ -29,11 +33,20 @@ public class RedactionReportIntegrationTest {
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@Autowired
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private RedactionReportController redactionReportController;
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@MockBean
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private LegalBasisMappingClient legalBasisMappingClient;
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@Test
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public void testReportGeneration() throws IOException {
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ClassPathResource redactionLogResource = new ClassPathResource("files/RedactionLogManual.txt");
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ClassPathResource legalBasisMappingResource = new ClassPathResource("files/LegalBasisMapping.json");
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LegalBasisMapping legalBasisMapping = objectMapper.readValue(legalBasisMappingResource.getInputStream(), LegalBasisMapping.class);
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when(legalBasisMappingClient.getLegalBasisMapping()).thenReturn(legalBasisMapping);
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ClassPathResource redactionLogResource = new ClassPathResource("files/RedactedLog.txt");
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RedactionLog redactionLog = objectMapper.readValue(redactionLogResource.getInputStream(), RedactionLog.class);
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@ -0,0 +1 @@
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{"reasonByLegalBasis":{"Reg (EC) No 1107/2009 Art. 63 (2d)":"methods of analysis for impurities in the active substance as manufactured except for methods for impurities that are considered to be toxicologically, ecotoxicologically or environmentally relevant","Reg (EC) No 1107/2009 Art. 63 (2c)":"results of production batches of the active substance including impurities","Reg (EC) No 1107/2009 Art. 63 (2b)":"the specification of impurity of the active substance except for the impurities that are considered to be toxicologically, ecotoxicologically or environmentally relevant","Reg (EC) No 1107/2009 Art. 63 (2a)":"the method of manufacture","Reg (EC) No 1107/2009 Art. 63 (2g)":"names and addresses of persons involved in testing on vertebrate animals","Reg (EC) No 1107/2009 Art. 63 (2f)":"information on the complete composition of a plant protection product","Reg (EC) No 1107/2009 Art. 63 (2e)":"links between a producer or importer and the applicant or the authorisation holder"}}
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File diff suppressed because one or more lines are too long
@ -1 +0,0 @@
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{"redactionLogEntry":[{"id":"3080535605f06a5a397c4a9a5e501e9e","type":"address","value":"Regina Dorn","reason":"Applicant information was found","redacted":true,"section":"1.2.1 Name and address of applicant(s) for approval of the active substance","color":[0.0,1.0,1.0],"positions":[{"topLeft":{"x":147.86,"y":226.28998},"width":32.17697,"height":11.017679,"page":1},{"topLeft":{"x":181.79697,"y":226.28998},"width":23.68721,"height":11.017679,"page":1}],"sectionNumber":3,"manual":false,"hint":false},{"id":"b54d906a78a3988c54c67f188acab849","type":"address","value":"Schwarzwaldallee 215 P.O. Box CH-4002 Basel Switzerland","reason":"Applicant information was found","redacted":true,"section":"1.2.1 Name and address of applicant(s) for approval of the active substance","color":[0.0,1.0,1.0],"positions":[{"topLeft":{"x":147.86,"y":289.52997},"width":81.095245,"height":11.017679,"page":1},{"topLeft":{"x":230.73732,"y":289.52997},"width":17.438568,"height":11.017679,"page":1},{"topLeft":{"x":147.86,"y":276.93},"width":20.562881,"height":11.017679,"page":1},{"topLeft":{"x":170.18288,"y":276.93},"width":19.359528,"height":11.017679,"page":1},{"topLeft":{"x":147.86,"y":264.21002},"width":41.950012,"height":11.017679,"page":1},{"topLeft":{"x":191.57,"y":264.21002},"width":25.519852,"height":11.017679,"page":1},{"topLeft":{"x":147.86,"y":251.60999},"width":53.649796,"height":11.017679,"page":1}],"sectionNumber":3,"manual":false,"hint":false},{"id":"7b4ff6e32a8bdaa7de5dcdeb13ff8edd","type":"address","value":"regina.dorn@syngenta.com","reason":"Applicant information was found","redacted":true,"section":"1.2.1 Name and address of applicant(s) for approval of the active substance","color":[0.0,1.0,1.0],"positions":[{"topLeft":{"x":147.86,"y":188.34003},"width":122.451065,"height":11.017679,"page":1}],"sectionNumber":3,"manual":false,"hint":false},{"id":"c357d6781fb4bb7e7020a67dbc63763c","type":"address","value":"Syngenta Crop Protection AG","reason":"Applicant information was found","redacted":true,"section":"1.2.1 Name and address of applicant(s) for approval of the active substance","color":[0.0,1.0,1.0],"positions":[{"topLeft":{"x":147.86,"y":302.25},"width":41.88115,"height":11.017679,"page":1},{"topLeft":{"x":191.50114,"y":302.25},"width":23.080002,"height":11.017679,"page":1},{"topLeft":{"x":216.34114,"y":302.25},"width":46.23088,"height":11.017679,"page":1},{"topLeft":{"x":264.2106,"y":302.25},"width":16.886566,"height":11.017679,"page":1}],"sectionNumber":3,"manual":false,"hint":false},{"id":"946a2cc404d6568d34b1ca9a4c688ec9","type":"address","value":"+41 (61) 323 6358","reason":"Applicant information was found","redacted":true,"section":"1.2.1 Name and address of applicant(s) for approval of the active substance","color":[0.0,1.0,1.0],"positions":[{"topLeft":{"x":147.86,"y":213.65997},"width":18.266571,"height":11.017679,"page":1},{"topLeft":{"x":167.88657,"y":213.65997},"width":19.315353,"height":11.017679,"page":1},{"topLeft":{"x":188.99504,"y":213.65997},"width":17.438568,"height":11.017679,"page":1},{"topLeft":{"x":208.1936,"y":213.65997},"width":23.080017,"height":11.017679,"page":1}],"sectionNumber":3,"manual":false,"hint":false},{"id":"687171974a4fc3aa0f43ec2118256590","type":"address","value":"+41 (61) 323 6155","reason":"Applicant information was found","redacted":true,"section":"1.2.1 Name and address of applicant(s) for approval of the active substance","color":[0.0,1.0,1.0],"positions":[{"topLeft":{"x":147.86,"y":200.94},"width":18.266571,"height":11.017679,"page":1},{"topLeft":{"x":167.88657,"y":200.94},"width":19.315353,"height":11.017679,"page":1},{"topLeft":{"x":188.99504,"y":200.94},"width":17.438568,"height":11.017679,"page":1},{"topLeft":{"x":208.1936,"y":200.94},"width":23.080017,"height":11.017679,"page":1}],"sectionNumber":3,"manual":false,"hint":false}]}
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@ -1,429 +0,0 @@
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{
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"redactionLogEntry": [
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{
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"id": "e5be0f1d941bbb92a068e198648d06c4",
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"type": "name",
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"value": "Robinson N.",
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"reason": "Not redacted because row is not a vertebrate study",
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"legalBasis": "Reg (EC) No 1107/2009 Art. 63 (2g)",
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"redacted": false,
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"section": "Table in: ",
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"color": [
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0.8,
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0.8,
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0.8
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],
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"positions": [
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{
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"topLeft": {
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"x": 142.04396,
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"y": 241.282
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},
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"width": 7.648056,
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"height": 42.43087,
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"page": 1
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}
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],
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"sectionNumber": 3,
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"manual": false,
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"status": null,
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"hint": false
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},
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{
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"id": "0295bbdff66926ebb57b03641bba7ba8",
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"type": "address",
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"value": "Syngenta Crop Protection AG, Basel, Switzerland",
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"reason": "Not redacted because row is not a vertebrate study",
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"legalBasis": "Reg (EC) No 1107/2009 Art. 63 (2g)",
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"redacted": false,
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"section": "Table in: ",
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"color": [
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0.8,
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0.8,
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0.8
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],
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"positions": [
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{
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"topLeft": {
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"x": 289.44595,
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"y": 327.567
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},
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"width": 7.648041,
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"height": 82.51475,
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"page": 1
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},
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{
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"topLeft": {
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"x": 298.67056,
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"y": 327.567
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},
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"width": 7.648041,
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"height": 75.32377,
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"page": 1
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}
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],
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"sectionNumber": 4,
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"manual": false,
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"status": null,
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"hint": false
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},
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{
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"id": "1bd556e9b3dd82987f9775b19bb26fa4",
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"type": "address",
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"value": "RCC Ltd., Itingen, Switzerland",
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"reason": "Not redacted because row is not a vertebrate study",
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"legalBasis": "Reg (EC) No 1107/2009 Art. 63 (2g)",
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"redacted": false,
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"section": "Table in: ",
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"color": [
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0.8,
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0.8,
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0.8
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],
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"positions": [
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{
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"topLeft": {
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"x": 307.89517,
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"y": 327.567
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},
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"width": 7.648041,
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"height": 61.670967,
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"page": 1
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},
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{
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"topLeft": {
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"x": 316.99985,
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"y": 327.567
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},
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"width": 7.648041,
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"height": 38.104286,
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"page": 1
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}
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],
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"sectionNumber": 4,
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"manual": false,
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"status": null,
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"hint": false
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},
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{
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"id": "e4eb6f849b60753c59897d1da21f3d83",
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"type": "hint_only",
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"value": "N",
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"reason": null,
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"legalBasis": "Reg (EC) No 1107/2009 Art. 63 (2g)",
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"redacted": false,
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"section": "Table in: ",
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"color": [
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0,
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0.9882353,
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0.69411767
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],
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"positions": [
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{
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"topLeft": {
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"x": 145.03896,
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"y": 448.34
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},
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"width": 7.648056,
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"height": 4.000008,
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"page": 1
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}
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],
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"sectionNumber": 3,
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Loading…
x
Reference in New Issue
Block a user