RED-7679: Removed unnecessary logs and updated tables demo rules
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package drools
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import com.iqser.red.service.redaction.v1.server.redaction.model.Section
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global Section section
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// --------------------------------------- Your rules below this line--------------------------------------------------
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rule "0a: Study Type File Attribute"
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when
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Section(
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!fileAttributeContainsAnyOf("OECD Number","402","403","404","405","425","429","436","438","439","471","487")
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&& (
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text.contains("DATA REQUIREMENT")
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|| text.contains("TEST GUIDELINE")
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|| text.contains("MÉTODO(S) DE REFERÊNCIA(S):")
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)
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&& (
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text.contains("OECD")
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|| text.contains("EPA")
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|| text.contains("OPPTS")
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)
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)
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then
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section.addFileAttribute("OECD Number", "(?<=OECD)(?:[\\w\\s,\\[\\]\\(\\)\\.]{1,10}|(?:.{5,40}(?:Number |Procedure |Guideline )))(4[\\d]{2})", true, 1);
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section.addFileAttribute("OECD Number", "(?<=OECD).{5,40}Method (4[\\d]{2}).{1,65}(\\d{4})\\)", true, 1);
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end
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rule "1: Guidelines"
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when
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Section(
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(
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text.contains("DATA REQUIREMENT")
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|| text.contains("TEST GUIDELINE")
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|| text.contains("MÉTODO(S) DE REFERÊNCIA(S):")
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)
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&& (
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text.contains("OECD")
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|| text.contains("EPA")
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|| text.contains("OPPTS")
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)
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)
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then
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section.redactByRegEx("(?<=OECD)(?:[\\w\\s,\\[\\]\\(\\)\\.]{1,10}|.{5,40}(?:Number |Procedure |Guideline ))(4[\\d]{2})", true, 1, "oecd_guideline_number", 1, "OECD Guideline no. found", "n-a");
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section.redactByRegEx("(?<=OECD)(?:[\\w\\s,\\[\\]\\(\\)\\.]{1,10}|.{5,40}(?:Number |Procedure |Guideline ))(4[\\d]{2}),?\\s\\(?(\\d{4})\\)?", true, 2, "oecd_guideline_year", 1, "OECD Guideline year found", "n-a");
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section.redactByRegEx("(?<=OECD)[\\w\\s,\\[\\]]{1,10}\\((\\d{4})\\)\\s(4[\\d]{2})", true, 1, "oecd_guideline_year", 1, "OECD Guideline year found", "n-a");
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section.redactByRegEx("(?<=OECD).{5,40}Method (4[\\d]{2}).{1,65}(\\d{4})\\)", true, 1, "oecd_guideline_number", 1, "OECD Guideline number found", "n-a");
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section.redactByRegEx("(?<=OECD).{5,40}Method (4[\\d]{2}).{1,65}(\\d{4})\\)", true, 2, "oecd_guideline_year", 1, "OECD Guideline year found", "n-a");
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end
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rule "2: Full Table extraction (Guideline Deviation)"
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when
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Section(
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fileAttributeByLabelEqualsIgnoreCase("OECD Number","425")
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&& headlineContainsWord("Full Table")
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&& hasTableHeader("Sex")
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)
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then
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section.redactSectionTextWithoutHeadLine("guideline_deviation",2,"Full table extraction into guideline deviation","n-a");
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end
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rule "3: Individual row extraction (Clinical Signs)"
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when
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Section(
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fileAttributeByLabelEqualsIgnoreCase("OECD Number","425")
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&& headlineContainsWord("Individual Rows")
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&& hasTableHeader("Animal No.")
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&& (rowEquals("Animal No.","120-2") || rowEquals("Animal No.","120-5"))
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)
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then
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section.redactSectionTextWithoutHeadLine("clinical_signs",3,"Individual row based on animal number","n-a");
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end
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rule "4: Individual column extraction (Strain)"
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when
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Section(
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fileAttributeByLabelEqualsIgnoreCase("OECD Number","425")
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&& headlineContainsWord("Individual Column")
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&& hasTableHeader("Sex")
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)
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then
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section.redactCell("Sex",4,"dosages",false,"Individual column based on column header","n-a");
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end
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rule "5: Dose Mortality"
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when
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Section(
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fileAttributeByLabelEqualsIgnoreCase("OECD Number","425")
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&& headlineContainsWord("Combined Columns")
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&& hasTableHeader("Mortality")
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&& hasTableHeader("Dosage (mg/kg bw)")
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)
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then
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section.redactCell("Mortality",5,"dose_mortality",false,"Dose Mortality found.","n-a");
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section.redactCell("Dosage (mg/kg bw)",5,"dose_mortality_dose",false,"Dose Mortality dose found.","n-a");
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end
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rule "6: targeted cell extraction (Experimental Start date)"
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when
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Section(
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fileAttributeByLabelEqualsIgnoreCase("OECD Number","425")
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&& headlineContainsWord("Value Extraction")
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&& hasTableHeader("Mortality")
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&& (rowEquals("Sex","male") || rowEquals("Sex","Male"))
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&& rowEquals("Mortality","Survived")
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)
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then
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section.redactCell("Treatment start",6,"experimental_start_date",false,"Female deaths date to experimental start date","n-a");
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end
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rule "7: targeted cell extraction (Experimental Stop date)"
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when
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Section(
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isInTable()
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&& (searchText.contains("female") || searchText.contains("Female"))
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&& searchText.contains("Survived")
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)
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then
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section.redactCellBelow(7,"experimental_end_date",true,false,"Female deaths date to experimental start date","n-a", "Sex", "Group 2");
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end
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rule "8: Indicator (Species)"
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when
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Section(
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fileAttributeByLabelEqualsIgnoreCase("OECD Number","425")
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&& headlineContainsWord("Entity-Based")
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&& matchesType("vertebrates")
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)
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then
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section.redactCell("Title",8,"study_design",false,"Vertebrate study found","n-a");
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end
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