470 lines
22 KiB
Plaintext
470 lines
22 KiB
Plaintext
package drools
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import static java.lang.String.format;
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import static com.iqser.red.service.redaction.v1.server.utils.RedactionSearchUtility.anyMatch;
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import static com.iqser.red.service.redaction.v1.server.utils.RedactionSearchUtility.exactMatch;
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import java.util.List;
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import java.util.LinkedList;
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import java.util.Set;
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import java.util.stream.Collectors;
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import java.util.Collection;
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import java.util.stream.Stream;
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import java.util.Optional;
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import com.iqser.red.service.redaction.v1.server.model.document.*;
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import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
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import com.iqser.red.service.redaction.v1.server.model.document.entity.*;
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import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
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import com.iqser.red.service.redaction.v1.server.model.document.entity.MatchedRule;
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import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity
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import com.iqser.red.service.redaction.v1.server.model.document.entity.MatchedRule
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.*;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.Section;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.Table;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.Paragraph;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.Image;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.ImageType;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.Page;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.Headline;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.SectionIdentifier;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.Footer;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.Header;
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import com.iqser.red.service.redaction.v1.server.model.document.nodes.NodeType;
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import com.iqser.red.service.redaction.v1.server.model.document.textblock.*;
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import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
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import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlockCollector;
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import com.iqser.red.service.redaction.v1.server.model.document.textblock.AtomicTextBlock;
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import com.iqser.red.service.redaction.v1.server.model.document.textblock.ConcatenatedTextBlock;
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import com.iqser.red.service.redaction.v1.server.model.NerEntities;
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import com.iqser.red.service.redaction.v1.server.model.dictionary.Dictionary;
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import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryModel;
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import com.iqser.red.service.redaction.v1.server.service.document.EntityCreationService;
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import com.iqser.red.service.redaction.v1.server.service.ManualChangesApplicationService;
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import com.iqser.red.service.redaction.v1.server.utils.RedactionSearchUtility;
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import com.iqser.red.service.persistence.service.v1.api.shared.model.FileAttribute;
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import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine;
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import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
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import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
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import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualForceRedaction;
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import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
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import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
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import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
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global Document document
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global EntityCreationService entityCreationService
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global ManualChangesApplicationService manualChangesApplicationService
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global Dictionary dictionary
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//------------------------------------ queries ------------------------------------
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query "getFileAttributes"
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$fileAttribute: FileAttribute()
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end
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//------------------------------------ Table extraction rules ------------------------------------
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// Rule unit: TAB.0
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rule "TAB.0.0: Study Type File Attribute"
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when
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not FileAttribute(label == "OECD Number", valueEqualsAnyOf("402","403","404","405","425","429","436","438","439","471","487"))
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$section: Section(containsAnyString("DATA REQUIREMENT", "TEST GUIDELINE", "MÉTODO(S) DE REFERÊNCIA(S):")
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&& containsAnyString("OECD", "EPA", "OPPTS"))
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then
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RedactionSearchUtility.findTextRangesByRegexIgnoreCase("(?<=OECD)(?:[\\w\\s,\\[\\]\\(\\)\\.]{1,10}|(?:.{5,40}(?:Number |Procedure |Guideline )))(4[\\d]{2})", 1 ,$section.getTextBlock()).stream()
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.map(boundary -> $section.getTextBlock().subSequence(boundary).toString())
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.map(value -> FileAttribute.builder().label("OECD Number").value(value).build())
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.forEach(fileAttribute -> insert(fileAttribute));
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RedactionSearchUtility.findTextRangesByRegexIgnoreCase("(?<=OECD).{5,40}Method (4[\\d]{2}).{1,65}(\\d{4})\\)", 1, $section.getTextBlock()).stream()
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.map(boundary -> $section.getTextBlock().subSequence(boundary).toString())
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.map(value -> FileAttribute.builder().label("OECD Number").value(value).build())
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.forEach(fileAttribute -> insert(fileAttribute));
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end
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rule "TAB.0.1: Guidelines"
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when
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$section: Section(containsAnyString("DATA REQUIREMENT", "TEST GUIDELINE", "MÉTODO(S) DE REFERÊNCIA(S):") && containsAnyString("OECD", "EPA", "OPPTS"))
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then
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entityCreationService.byRegex("(?<=OECD)(?:[\\w\\s,\\[\\]\\(\\)\\.]{1,10}|.{5,40}(?:Number |Procedure |Guideline ))(4[\\d]{2})", "oecd_guideline_number", EntityType.ENTITY, 1, $section)
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.forEach(guideline -> guideline.apply("TAB.0.1", "OECD Guideline no. found"));
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entityCreationService.byRegex("(?<=OECD)(?:[\\w\\s,\\[\\]\\(\\)\\.]{1,10}|.{5,40}(?:Number |Procedure |Guideline ))(4[\\d]{2}),?\\s\\(?(\\d{4})\\)?", "oecd_guideline_year", EntityType.ENTITY, 2, $section)
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.forEach(guideline -> guideline.apply("TAB.0.1", "OECD Guideline year found"));
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entityCreationService.byRegex("(?<=OECD)[\\w\\s,\\[\\]]{1,10}\\((\\d{4})\\)\\s(4[\\d]{2})", "oecd_guideline_year", EntityType.ENTITY, 1, $section)
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.forEach(guideline -> guideline.apply("TAB.0.1", "OECD Guideline year found"));
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entityCreationService.byRegex("(?<=OECD).{5,40}Method (4[\\d]{2}).{1,65}(\\d{4})\\)", "oecd_guideline_number", EntityType.ENTITY, 1, $section)
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.forEach(guideline -> guideline.apply("TAB.0.1", "OECD Guideline number found"));
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entityCreationService.byRegex("(?<=OECD).{5,40}Method (4[\\d]{2}).{1,65}(\\d{4})\\)", "oecd_guideline_year", EntityType.ENTITY, 2, $section)
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.forEach(guideline -> guideline.apply("TAB.0.1", "OECD Guideline year found"));
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end
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// Rule unit: TAB.6
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rule "TAB.6.0: Targeted cell extraction (Experimental Stop date)"
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when
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$section: Section(getHeadline().containsString("Advanced Table Extraction"), containsAllStrings("female", "Female", "Survived", "Group 2"))
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$table: Table(hasHeader("Group 2")) from $section.streamChildren().toList()
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TableCell(containsWordIgnoreCase("Female"), $row: row) from $table.streamTableCellsWithHeader("Group 2").toList()
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TableCell($row == row, containsStringIgnoreCase("Survived")) from $table.streamTableCellsWithHeader("Group 2").toList()
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$femaleSurvived: TableCell($row == row) from $table.streamTableCellsWithHeader("Group 2").toList()
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then
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entityCreationService.bySemanticNode($femaleSurvived, "experiment_female_survived", EntityType.ENTITY)
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.ifPresent(entity -> entity.apply("TAB.6.0", "Female in group to experimental start date"));
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end
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//------------------------------------ Manual changes rules ------------------------------------
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// Rule unit: MAN.0
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rule "MAN.0.0: Apply manual resize redaction"
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salience 128
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when
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$resizeRedaction: ManualResizeRedaction($id: annotationId, $requestDate: requestDate)
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not ManualResizeRedaction(annotationId == $id, requestDate.isBefore($requestDate))
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$entityToBeResized: TextEntity(matchesAnnotationId($id))
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then
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manualChangesApplicationService.resize($entityToBeResized, $resizeRedaction);
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retract($resizeRedaction);
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update($entityToBeResized);
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$entityToBeResized.getIntersectingNodes().forEach(node -> update(node));
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end
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rule "MAN.0.1: Apply manual resize redaction"
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salience 128
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when
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$resizeRedaction: ManualResizeRedaction($id: annotationId, $requestDate: requestDate)
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not ManualResizeRedaction(annotationId == $id, requestDate.isBefore($requestDate))
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$imageToBeResized: Image(id == $id)
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then
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manualChangesApplicationService.resizeImage($imageToBeResized, $resizeRedaction);
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retract($resizeRedaction);
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update($imageToBeResized);
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update($imageToBeResized.getParent());
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end
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// Rule unit: MAN.1
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rule "MAN.1.0: Apply id removals that are valid and not in forced redactions to Entity"
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salience 128
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when
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$idRemoval: IdRemoval($id: annotationId, !removeFromDictionary, !removeFromAllDossiers)
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$entityToBeRemoved: TextEntity(matchesAnnotationId($id))
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then
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$entityToBeRemoved.getManualOverwrite().addChange($idRemoval);
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update($entityToBeRemoved);
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retract($idRemoval);
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$entityToBeRemoved.getIntersectingNodes().forEach(node -> update(node));
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end
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rule "MAN.1.1: Apply id removals that are valid and not in forced redactions to Image"
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salience 128
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when
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$idRemoval: IdRemoval($id: annotationId)
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$imageEntityToBeRemoved: Image($id == id)
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then
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$imageEntityToBeRemoved.getManualOverwrite().addChange($idRemoval);
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update($imageEntityToBeRemoved);
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retract($idRemoval);
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update($imageEntityToBeRemoved.getParent());
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end
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// Rule unit: MAN.2
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rule "MAN.2.0: Apply force redaction"
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salience 128
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when
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$force: ManualForceRedaction($id: annotationId)
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$entityToForce: TextEntity(matchesAnnotationId($id))
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then
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$entityToForce.getManualOverwrite().addChange($force);
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update($entityToForce);
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$entityToForce.getIntersectingNodes().forEach(node -> update(node));
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retract($force);
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end
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rule "MAN.2.1: Apply force redaction to images"
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salience 128
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when
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$force: ManualForceRedaction($id: annotationId)
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$imageToForce: Image(id == $id)
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then
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$imageToForce.getManualOverwrite().addChange($force);
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update($imageToForce);
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update($imageToForce.getParent());
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retract($force);
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end
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// Rule unit: MAN.3
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rule "MAN.3.0: Apply entity recategorization"
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salience 128
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when
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$recategorization: ManualRecategorization($id: annotationId, $type: type, $requestDate: requestDate)
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not ManualRecategorization($id == annotationId, requestDate.isBefore($requestDate))
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$entityToBeRecategorized: TextEntity(matchesAnnotationId($id), type() != $type)
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then
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$entityToBeRecategorized.getIntersectingNodes().forEach(node -> update(node));
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$entityToBeRecategorized.getManualOverwrite().addChange($recategorization);
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update($entityToBeRecategorized);
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retract($recategorization);
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end
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rule "MAN.3.1: Apply entity recategorization of same type"
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salience 128
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when
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$recategorization: ManualRecategorization($id: annotationId, $type: type, $requestDate: requestDate)
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not ManualRecategorization($id == annotationId, requestDate.isBefore($requestDate))
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$entityToBeRecategorized: TextEntity(matchesAnnotationId($id), type() == $type)
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then
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$entityToBeRecategorized.getManualOverwrite().addChange($recategorization);
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retract($recategorization);
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end
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rule "MAN.3.2: Apply image recategorization"
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salience 128
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when
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$recategorization: ManualRecategorization($id: annotationId, $requestDate: requestDate)
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not ManualRecategorization($id == annotationId, requestDate.isBefore($requestDate))
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$imageToBeRecategorized: Image($id == id)
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then
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manualChangesApplicationService.recategorize($imageToBeRecategorized, $recategorization);
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update($imageToBeRecategorized);
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update($imageToBeRecategorized.getParent());
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retract($recategorization);
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end
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rule "MAN.3.3: Apply recategorization entities by default"
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salience 128
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when
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$entity: TextEntity(getManualOverwrite().getRecategorized().orElse(false), !dictionary.isHint(type()))
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then
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$entity.apply("MAN.3.3", "Recategorized entities are applied by default.", $entity.legalBasis());
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end
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// Rule unit: MAN.4
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rule "MAN.4.0: Apply legal basis change"
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salience 128
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when
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$legalBasisChange: ManualLegalBasisChange($id: annotationId)
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$imageToBeRecategorized: Image($id == id)
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then
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$imageToBeRecategorized.getManualOverwrite().addChange($legalBasisChange);
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update($imageToBeRecategorized)
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retract($legalBasisChange)
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end
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rule "MAN.4.1: Apply legal basis change"
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salience 128
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when
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$legalBasisChange: ManualLegalBasisChange($id: annotationId)
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$entityToBeChanged: TextEntity(matchesAnnotationId($id))
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then
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$entityToBeChanged.getManualOverwrite().addChange($legalBasisChange);
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update($entityToBeChanged)
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retract($legalBasisChange)
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end
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//------------------------------------ Entity merging rules ------------------------------------
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// Rule unit: X.0
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rule "X.0.0: Remove Entity contained by Entity of same type"
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salience 65
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when
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$larger: TextEntity($type: type(), $entityType: entityType, active())
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$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges())
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then
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$contained.remove("X.0.0", "remove Entity contained by Entity of same type");
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retract($contained);
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end
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// Rule unit: X.1
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rule "X.1.0: Merge intersecting Entities of same type"
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salience 64
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when
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$first: TextEntity($type: type(), $entityType: entityType, !resized(), active())
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$second: TextEntity(intersects($first), type() == $type, entityType == $entityType, this != $first, !hasManualChanges(), active())
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then
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TextEntity mergedEntity = entityCreationService.mergeEntitiesOfSameType(List.of($first, $second), $type, $entityType, document);
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$first.remove("X.1.0", "merge intersecting Entities of same type");
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$second.remove("X.1.0", "merge intersecting Entities of same type");
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retract($first);
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retract($second);
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mergedEntity.getIntersectingNodes().forEach(node -> update(node));
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end
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// Rule unit: X.2
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rule "X.2.0: Remove Entity of type ENTITY when contained by FALSE_POSITIVE"
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salience 64
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when
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$falsePositive: TextEntity($type: type(), entityType == EntityType.FALSE_POSITIVE, active())
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$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges())
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then
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$entity.getIntersectingNodes().forEach(node -> update(node));
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$entity.remove("X.2.0", "remove Entity of type ENTITY when contained by FALSE_POSITIVE");
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retract($entity)
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end
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// Rule unit: X.3
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rule "X.3.0: Remove Entity of type RECOMMENDATION when contained by FALSE_RECOMMENDATION"
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salience 64
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when
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$falseRecommendation: TextEntity($type: type(), entityType == EntityType.FALSE_RECOMMENDATION, active())
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$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
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then
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$recommendation.remove("X.3.0", "remove Entity of type RECOMMENDATION when contained by FALSE_RECOMMENDATION");
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retract($recommendation);
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end
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// Rule unit: X.4
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rule "X.4.0: Remove Entity of type RECOMMENDATION when text range equals ENTITY with same type"
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salience 256
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when
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$entity: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
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$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
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then
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$entity.addEngines($recommendation.getEngines());
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$recommendation.remove("X.4.0", "remove Entity of type RECOMMENDATION when text range equals ENTITY with same type");
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retract($recommendation);
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end
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// Rule unit: X.5
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rule "X.5.0: Remove Entity of type RECOMMENDATION when intersected by ENTITY"
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salience 256
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when
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$entity: TextEntity((entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
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$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges())
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then
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$recommendation.remove("X.5.0", "remove Entity of type RECOMMENDATION when intersected by ENTITY");
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retract($recommendation);
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end
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rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATION"
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salience 256
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when
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$entity: TextEntity($type: type(), entityType == EntityType.RECOMMENDATION, active())
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$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
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then
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$recommendation.remove("X.5.1", "remove Entity of type RECOMMENDATION when contained by RECOMMENDATION");
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retract($recommendation);
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end
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// Rule unit: X.6
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rule "X.6.0: Remove Entity of lower rank, when contained by entity of type ENTITY or HINT"
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salience 32
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when
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$higherRank: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
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$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges())
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then
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$lowerRank.getIntersectingNodes().forEach(node -> update(node));
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$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY or HINT");
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retract($lowerRank);
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end
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rule "X.6.1: remove Entity, when contained in another entity of type ENTITY or HINT with larger text range"
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salience 32
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when
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$outer: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
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$inner: TextEntity(containedBy($outer), type() != $type, $outer.getTextRange().length > getTextRange().length(), !hasManualChanges())
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then
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$inner.getIntersectingNodes().forEach(node -> update(node));
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$inner.remove("X.6.1", "remove Entity, when contained in another entity of type ENTITY or HINT with larger text range");
|
|
retract($inner);
|
|
end
|
|
|
|
|
|
// Rule unit: X.7
|
|
rule "X.7.0: Remove all images"
|
|
salience 512
|
|
when
|
|
$image: Image(imageType != ImageType.OCR, !hasManualChanges())
|
|
then
|
|
$image.remove("X.7.0", "remove all images");
|
|
retract($image);
|
|
end
|
|
|
|
|
|
// Rule unit: X.8
|
|
rule "X.8.0: Remove Entity when text range and type equals to imported Entity"
|
|
salience 257
|
|
when
|
|
$entity: TextEntity($type: type(), engines contains Engine.IMPORTED, active())
|
|
$other: TextEntity(getTextRange().equals($entity.getTextRange()), this != $entity, type() == $type, engines not contains Engine.IMPORTED)
|
|
then
|
|
$other.remove("X.8.0", "remove Entity when text range and type equals to imported Entity");
|
|
$entity.addEngines($other.getEngines());
|
|
retract($other);
|
|
end
|
|
|
|
rule "X.8.1: Remove Entity when intersected by imported Entity"
|
|
salience 256
|
|
when
|
|
$entity: TextEntity(engines contains Engine.IMPORTED, active())
|
|
$other: TextEntity(intersects($entity), this != $entity, engines not contains Engine.IMPORTED)
|
|
then
|
|
$other.remove("X.8.1", "remove Entity when intersected by imported Entity");
|
|
retract($other);
|
|
end
|
|
|
|
|
|
// Rule unit: X.9
|
|
rule "X.9.0: Merge mostly contained signatures"
|
|
when
|
|
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI)
|
|
$signature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.ALGORITHM, mostlyContains($aiSignature, 0.8))
|
|
then
|
|
$aiSignature.remove("X.9.0", "removed because already contained by alogrithm signature");
|
|
$signature.addEngine(LayoutEngine.AI);
|
|
end
|
|
|
|
|
|
// Rule unit: X.10
|
|
rule "X.10.0: remove false positives of ai"
|
|
when
|
|
$anyImage: Image(engines contains LayoutEngine.ALGORITHM)
|
|
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI, !mostlyContainedBy($anyImage, 0.8))
|
|
then
|
|
$aiSignature.remove("X.10.0", "Removed because false positive");
|
|
end
|
|
|
|
|
|
//------------------------------------ File attributes rules ------------------------------------
|
|
|
|
// Rule unit: FA.1
|
|
rule "FA.1.0: Remove duplicate FileAttributes"
|
|
salience 64
|
|
when
|
|
$fileAttribute: FileAttribute($label: label, $value: value)
|
|
$duplicate: FileAttribute(this != $fileAttribute, label == $label, value == $value)
|
|
then
|
|
retract($duplicate);
|
|
end
|
|
|
|
|
|
//------------------------------------ Local dictionary search rules ------------------------------------
|
|
|
|
// Rule unit: LDS.0
|
|
rule "LDS.0.0: Run local dictionary search"
|
|
agenda-group "LOCAL_DICTIONARY_ADDS"
|
|
salience -999
|
|
when
|
|
$dictionaryModel: DictionaryModel(!localEntriesWithMatchedRules.isEmpty()) from dictionary.getDictionaryModels()
|
|
then
|
|
entityCreationService.bySearchImplementation($dictionaryModel.getLocalSearch(), $dictionaryModel.getType(), EntityType.RECOMMENDATION, document)
|
|
.forEach(entity -> {
|
|
Collection<MatchedRule> matchedRules = $dictionaryModel.getMatchedRulesForLocalDictionaryEntry(entity.getValue());
|
|
matchedRules.forEach(matchedRule -> entity.addMatchedRule(matchedRule.asSkippedIfApplied()));
|
|
});
|
|
end
|