Compare commits
4
Commits
| Author | SHA1 | Date | |
|---|---|---|---|
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c9645c3329 | ||
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3f69030b03 | ||
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608ea4bbcc | ||
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9b7deca3db |
+1
@@ -22,6 +22,7 @@ public class RedactionLogEntry {
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private String legalBasis;
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private boolean redacted;
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private boolean isHint;
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private boolean isRecommendation;
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private String section;
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private float[] color;
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@@ -20,7 +20,7 @@
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<dependency>
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<groupId>com.iqser.red.service</groupId>
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<artifactId>configuration-service-api-v1</artifactId>
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<version>1.3.5</version>
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<version>1.3.7</version>
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</dependency>
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<dependency>
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<groupId>org.drools</groupId>
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+2
@@ -27,4 +27,6 @@ public class Document {
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private List<RedactionLogEntry> redactionLogEntities = new ArrayList<>();
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private SectionGrid sectionGrid = new SectionGrid();
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private long dictionaryVersion;
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private long rulesVersion;
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}
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+5
-8
@@ -18,7 +18,6 @@ import com.iqser.red.service.redaction.v1.resources.RedactionResource;
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import com.iqser.red.service.redaction.v1.server.classification.model.Document;
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import com.iqser.red.service.redaction.v1.server.classification.model.Page;
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import com.iqser.red.service.redaction.v1.server.exception.RedactionException;
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import com.iqser.red.service.redaction.v1.server.redaction.service.DictionaryService;
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import com.iqser.red.service.redaction.v1.server.redaction.service.DroolsExecutionService;
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import com.iqser.red.service.redaction.v1.server.redaction.service.EntityRedactionService;
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import com.iqser.red.service.redaction.v1.server.segmentation.PdfSegmentationService;
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@@ -40,7 +39,6 @@ public class RedactionController implements RedactionResource {
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private final EntityRedactionService entityRedactionService;
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private final PdfFlattenService pdfFlattenService;
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private final DroolsExecutionService droolsExecutionService;
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private final DictionaryService dictionaryService;
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@Override
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@@ -57,11 +55,11 @@ public class RedactionController implements RedactionResource {
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if (redactionRequest.isFlatRedaction()) {
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PDDocument flatDocument = pdfFlattenService.flattenPDF(pdDocument);
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return convert(flatDocument, classifiedDoc.getPages()
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.size(), classifiedDoc.getRedactionLogEntities(), classifiedDoc.getSectionGrid());
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.size(), classifiedDoc.getRedactionLogEntities(), classifiedDoc.getSectionGrid(), classifiedDoc.getDictionaryVersion(), classifiedDoc.getRulesVersion());
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}
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return convert(pdDocument, classifiedDoc.getPages()
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.size(), classifiedDoc.getRedactionLogEntities(), classifiedDoc.getSectionGrid());
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.size(), classifiedDoc.getRedactionLogEntities(), classifiedDoc.getSectionGrid(), classifiedDoc.getDictionaryVersion(), classifiedDoc.getRulesVersion());
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} catch (IOException e) {
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throw new RedactionException(e);
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@@ -142,21 +140,20 @@ public class RedactionController implements RedactionResource {
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private RedactionResult convert(PDDocument document, int numberOfPages) throws IOException {
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return convert(document, numberOfPages, null, null);
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return convert(document, numberOfPages, null, null, 0, 0);
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}
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private RedactionResult convert(PDDocument document, int numberOfPages,
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List<RedactionLogEntry> redactionLogEntities,
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SectionGrid sectionGrid) throws IOException {
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SectionGrid sectionGrid, long dictionaryVersion, long rulesVersion) throws IOException {
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try (ByteArrayOutputStream byteArrayOutputStream = new ByteArrayOutputStream()) {
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document.save(byteArrayOutputStream);
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return RedactionResult.builder()
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.document(byteArrayOutputStream.toByteArray())
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.numberOfPages(numberOfPages)
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.redactionLog(new RedactionLog(redactionLogEntities, dictionaryService.getDictionaryVersion(), droolsExecutionService
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.getRulesVersion()))
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.redactionLog(new RedactionLog(redactionLogEntities,dictionaryVersion, rulesVersion))
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.sectionGrid(sectionGrid)
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.build();
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}
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+82
@@ -0,0 +1,82 @@
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package com.iqser.red.service.redaction.v1.server.redaction.model;
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import java.util.List;
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import java.util.Map;
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import java.util.Set;
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import lombok.AllArgsConstructor;
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import lombok.Data;
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import lombok.Getter;
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@Data
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@AllArgsConstructor
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public class Dictionary {
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public static final String RECOMMENDATION_PREFIX = "recommendation_";
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@Getter
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private List<DictionaryModel> dictionaryModels;
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private Map<String, DictionaryModel> localAccessMap;
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@Getter
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private long version;
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public boolean isRecommendation(String type) {
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DictionaryModel model = localAccessMap.get(type);
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if (model != null) {
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return model.isRecommendation();
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}
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return false;
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}
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public boolean hasLocalEntries() {
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return dictionaryModels.stream().anyMatch(dm -> !dm.getLocalEntries().isEmpty());
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}
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public Set<String> getTypes() {
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return localAccessMap.keySet();
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}
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public boolean containsValue(String type, String value) {
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if (localAccessMap.containsKey(type) && localAccessMap.get(type)
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.getEntries()
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.contains(value) || localAccessMap.containsKey(type) && localAccessMap.get(type)
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.getLocalEntries()
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.contains(value) || localAccessMap.containsKey(RECOMMENDATION_PREFIX + type) && localAccessMap.get(RECOMMENDATION_PREFIX + type)
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.getEntries()
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.contains(value) || localAccessMap.containsKey(RECOMMENDATION_PREFIX + type) && localAccessMap.get(RECOMMENDATION_PREFIX + type)
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.getLocalEntries()
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.contains(value)) {
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return true;
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}
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return false;
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}
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public boolean isHint(String type) {
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DictionaryModel model = localAccessMap.get(type);
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if (model != null) {
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return model.isHint();
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}
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return false;
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}
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public boolean isCaseInsensitiveDictionary(String type) {
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DictionaryModel dictionaryModel = localAccessMap.get(type);
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if (dictionaryModel != null) {
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return dictionaryModel.isCaseInsensitive();
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}
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return false;
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}
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}
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+3
-2
@@ -1,11 +1,11 @@
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package com.iqser.red.service.redaction.v1.server.redaction.model;
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import java.util.Set;
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import lombok.AllArgsConstructor;
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import lombok.Data;
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import java.util.Set;
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@Data
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@AllArgsConstructor
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public class DictionaryModel {
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@@ -15,6 +15,7 @@ public class DictionaryModel {
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private float[] color;
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private boolean caseInsensitive;
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private boolean hint;
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private boolean recommendation;
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private Set<String> entries;
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private Set<String> localEntries;
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+56
-15
@@ -1,15 +1,19 @@
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package com.iqser.red.service.redaction.v1.server.redaction.model;
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import static com.iqser.red.service.redaction.v1.server.redaction.model.Dictionary.RECOMMENDATION_PREFIX;
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import java.util.ArrayList;
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import java.util.HashMap;
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import java.util.HashSet;
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import java.util.List;
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import java.util.Map;
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import java.util.Set;
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import java.util.regex.Matcher;
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import java.util.regex.Pattern;
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import org.apache.commons.lang3.StringUtils;
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import com.iqser.red.service.redaction.v1.server.redaction.service.DictionaryService;
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import com.iqser.red.service.redaction.v1.server.redaction.utils.Patterns;
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import lombok.Builder;
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import lombok.Data;
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@@ -20,7 +24,12 @@ import lombok.extern.slf4j.Slf4j;
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@Builder
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public class Section {
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private DictionaryService dictionaryService;
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private boolean isLocal;
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private Set<String> dictionaryTypes;
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@Builder.Default
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private Map<String, Set<String>> localDictionaryAdds = new HashMap<>();
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private Set<Entity> entities;
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@@ -62,8 +71,11 @@ public class Section {
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public void redact(String type, int ruleNumber, String reason, String legalBasis) {
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boolean hasRecommendactionDictionary = dictionaryTypes.contains(RECOMMENDATION_PREFIX + type);
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entities.forEach(entity -> {
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if (entity.getType().equals(type)) {
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if (entity.getType().equals(type) || hasRecommendactionDictionary && entity.getType()
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.equals(RECOMMENDATION_PREFIX + type)) {
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entity.setRedaction(true);
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entity.setMatchedRule(ruleNumber);
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entity.setRedactionReason(reason);
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@@ -75,8 +87,11 @@ public class Section {
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public void redactNot(String type, int ruleNumber, String reason) {
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boolean hasRecommendactionDictionary = dictionaryTypes.contains(RECOMMENDATION_PREFIX + type);
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entities.forEach(entity -> {
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if (entity.getType().equals(type)) {
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if (entity.getType().equals(type) || hasRecommendactionDictionary && entity.getType()
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.equals(RECOMMENDATION_PREFIX + type)) {
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entity.setRedaction(false);
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entity.setMatchedRule(ruleNumber);
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entity.setRedactionReason(reason);
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@@ -146,8 +161,8 @@ public class Section {
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// HashSet keeps the older value, but we want the new only.
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entities.removeAll(found);
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entities.addAll(found);
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if (redactEverywhere) {
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dictionaryService.addToLocalDictionary(asType, value.trim());
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if (redactEverywhere && !isLocal()) {
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localDictionaryAdds.computeIfAbsent(asType, (x) -> new HashSet<>()).add(value.trim());
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}
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}
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}
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@@ -180,8 +195,8 @@ public class Section {
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// HashSet keeps the older value, but we want the new only.
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entities.removeAll(found);
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entities.addAll(found);
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if (redactEverywhere) {
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dictionaryService.addToLocalDictionary(asType, line.trim());
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if (redactEverywhere && !isLocal()) {
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localDictionaryAdds.computeIfAbsent(asType, (x) -> new HashSet<>()).add(line.trim());
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}
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}
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}
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@@ -247,24 +262,26 @@ public class Section {
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public void highlightCell(String cellHeader, int ruleNumber, String type) {
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annotateCell(cellHeader, ruleNumber, type, false, null, null);
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annotateCell(cellHeader, ruleNumber, type, false, false, null, null);
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}
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public void redactCell(String cellHeader, int ruleNumber, String type, String reason, String legalBasis) {
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public void redactCell(String cellHeader, int ruleNumber, String type, boolean addAsRecommendations, String reason,
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String legalBasis) {
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annotateCell(cellHeader, ruleNumber, type, true, reason, legalBasis);
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annotateCell(cellHeader, ruleNumber, type, true, addAsRecommendations, reason, legalBasis);
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}
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public void redactNotCell(String cellHeader, int ruleNumber, String type, String reason) {
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public void redactNotCell(String cellHeader, int ruleNumber, String type, boolean addAsRecommendations,
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String reason) {
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annotateCell(cellHeader, ruleNumber, type, false, reason, null);
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annotateCell(cellHeader, ruleNumber, type, false, addAsRecommendations, reason, null);
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}
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private void annotateCell(String cellHeader, int ruleNumber, String type, boolean redact, String reason,
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String legalBasis) {
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private void annotateCell(String cellHeader, int ruleNumber, String type, boolean redact,
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boolean addAsRecommendations, String reason, String legalBasis) {
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String cleanHeaderName = cellHeader.replaceAll("\n", "").replaceAll(" ", "").replaceAll("-", "");
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@@ -273,6 +290,7 @@ public class Section {
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log.warn("Could not find any data for {}.", cellHeader);
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} else {
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String word = value.toString();
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Entity entity = new Entity(word, type, value.getRowSpanStart(), value.getRowSpanStart() + word.length(), headline, sectionNumber);
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entity.setRedaction(redact);
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entity.setMatchedRule(ruleNumber);
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@@ -286,7 +304,30 @@ public class Section {
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entities.add(entity);
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entities = removeEntitiesContainedInLarger(entities);
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if (addAsRecommendations && !isLocal()) {
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String cleanedWord = word.replaceAll(",", " ").replaceAll(" ", " ").trim() + " ";
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Pattern pattern = Patterns.AUTHOR_TABLE_SPITTER;
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Matcher matcher = pattern.matcher(cleanedWord);
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|
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while (matcher.find()) {
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String match = matcher.group().trim();
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if (match.length() >= 3) {
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localDictionaryAdds.computeIfAbsent(RECOMMENDATION_PREFIX + type, (x) -> new HashSet<>())
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.add(match);
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String lastname = match.split(" ")[0];
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localDictionaryAdds.computeIfAbsent(RECOMMENDATION_PREFIX + type, (x) -> new HashSet<>())
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.add(lastname);
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}
|
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}
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}
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}
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}
|
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|
||||
}
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|
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|
||||
|
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|
||||
|
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+13
@@ -0,0 +1,13 @@
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package com.iqser.red.service.redaction.v1.server.redaction.model;
|
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|
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import lombok.AllArgsConstructor;
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import lombok.Data;
|
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|
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@Data
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@AllArgsConstructor
|
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public class SectionSearchableTextPair {
|
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|
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private Section section;
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private SearchableText searchableText;
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|
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}
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+53
-25
@@ -1,17 +1,5 @@
|
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package com.iqser.red.service.redaction.v1.server.redaction.service;
|
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|
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import com.iqser.red.service.configuration.v1.api.model.Colors;
|
||||
import com.iqser.red.service.configuration.v1.api.model.TypeResponse;
|
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import com.iqser.red.service.configuration.v1.api.model.TypeResult;
|
||||
import com.iqser.red.service.redaction.v1.server.client.DictionaryClient;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.DictionaryModel;
|
||||
import feign.FeignException;
|
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import lombok.Getter;
|
||||
import lombok.RequiredArgsConstructor;
|
||||
import lombok.extern.slf4j.Slf4j;
|
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import org.apache.commons.collections4.CollectionUtils;
|
||||
import org.springframework.stereotype.Service;
|
||||
|
||||
import java.awt.Color;
|
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import java.util.ArrayList;
|
||||
import java.util.Comparator;
|
||||
@@ -22,11 +10,27 @@ import java.util.Map;
|
||||
import java.util.Set;
|
||||
import java.util.stream.Collectors;
|
||||
|
||||
import org.apache.commons.collections4.CollectionUtils;
|
||||
import org.springframework.stereotype.Service;
|
||||
|
||||
import com.iqser.red.service.configuration.v1.api.model.Colors;
|
||||
import com.iqser.red.service.configuration.v1.api.model.TypeResponse;
|
||||
import com.iqser.red.service.configuration.v1.api.model.TypeResult;
|
||||
import com.iqser.red.service.redaction.v1.server.client.DictionaryClient;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.Dictionary;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.DictionaryModel;
|
||||
|
||||
import feign.FeignException;
|
||||
import lombok.Getter;
|
||||
import lombok.RequiredArgsConstructor;
|
||||
import lombok.extern.slf4j.Slf4j;
|
||||
|
||||
@Slf4j
|
||||
@Service
|
||||
@RequiredArgsConstructor
|
||||
public class DictionaryService {
|
||||
|
||||
|
||||
private final DictionaryClient dictionaryClient;
|
||||
|
||||
@Getter
|
||||
@@ -47,19 +51,9 @@ public class DictionaryService {
|
||||
@Getter
|
||||
private float[] notRedactedColor;
|
||||
|
||||
|
||||
private Map<String, DictionaryModel> localAccessMap = new HashMap<>();
|
||||
|
||||
public boolean hasLocalEntries() {
|
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return this.dictionary.stream().anyMatch(dm -> !dm.getLocalEntries().isEmpty());
|
||||
}
|
||||
|
||||
public void addToLocalDictionary(String type, String value) {
|
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localAccessMap.get(type).getLocalEntries().add(value);
|
||||
}
|
||||
|
||||
public void clearLocalEntries() {
|
||||
this.dictionary.forEach(dm -> dm.getLocalEntries().clear());
|
||||
}
|
||||
|
||||
|
||||
public void updateDictionary() {
|
||||
@@ -80,8 +74,8 @@ public class DictionaryService {
|
||||
|
||||
dictionary = typeResponse.getTypes()
|
||||
.stream()
|
||||
.map(t ->
|
||||
new DictionaryModel(t.getType(), t.getRank(), convertColor(t.getHexColor()), t.isCaseInsensitive(), t.isHint(), convertEntries(t), new HashSet<>()))
|
||||
.map(t -> new DictionaryModel(t.getType(), t.getRank(), convertColor(t.getHexColor()), t.isCaseInsensitive(), t
|
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.isHint(), t.isRecommendation(), convertEntries(t), new HashSet<>()))
|
||||
.sorted(Comparator.comparingInt(DictionaryModel::getRank).reversed())
|
||||
.collect(Collectors.toList());
|
||||
|
||||
@@ -101,6 +95,19 @@ public class DictionaryService {
|
||||
}
|
||||
|
||||
|
||||
public void updateExternalDictionary(Dictionary dictionary){
|
||||
dictionary.getDictionaryModels().forEach(dm -> {
|
||||
if(dm.isRecommendation() && !dm.getLocalEntries().isEmpty()){
|
||||
dictionaryClient.addEntries(dm.getType(), new ArrayList<>(dm.getLocalEntries()), false);
|
||||
long externalVersion = dictionaryClient.getVersion();
|
||||
if(externalVersion == dictionary.getVersion() + 1){
|
||||
dictionary.setVersion(externalVersion);
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
|
||||
private Set<String> convertEntries(TypeResult t) {
|
||||
|
||||
if (t.isCaseInsensitive()) {
|
||||
@@ -121,7 +128,9 @@ public class DictionaryService {
|
||||
return new float[]{color.getRed() / 255f, color.getGreen() / 255f, color.getBlue() / 255f};
|
||||
}
|
||||
|
||||
|
||||
public boolean isCaseInsensitiveDictionary(String type) {
|
||||
|
||||
DictionaryModel dictionaryModel = localAccessMap.get(type);
|
||||
if (dictionaryModel != null) {
|
||||
return dictionaryModel.isCaseInsensitive();
|
||||
@@ -129,7 +138,9 @@ public class DictionaryService {
|
||||
return false;
|
||||
}
|
||||
|
||||
|
||||
public float[] getColor(String type) {
|
||||
|
||||
DictionaryModel model = localAccessMap.get(type);
|
||||
if (model != null) {
|
||||
return model.getColor();
|
||||
@@ -137,11 +148,28 @@ public class DictionaryService {
|
||||
return defaultColor;
|
||||
}
|
||||
|
||||
|
||||
public boolean isHint(String type) {
|
||||
|
||||
DictionaryModel model = localAccessMap.get(type);
|
||||
if (model != null) {
|
||||
return model.isHint();
|
||||
}
|
||||
return false;
|
||||
}
|
||||
|
||||
public boolean isRecommendation(String type) {
|
||||
|
||||
DictionaryModel model = localAccessMap.get(type);
|
||||
if (model != null) {
|
||||
return model.isRecommendation();
|
||||
}
|
||||
return false;
|
||||
}
|
||||
|
||||
|
||||
public Dictionary getThreadSafeDictionary(){
|
||||
return new Dictionary(new ArrayList<>(dictionary), new HashMap<>(localAccessMap), dictionaryVersion);
|
||||
}
|
||||
|
||||
}
|
||||
+105
-43
@@ -1,24 +1,5 @@
|
||||
package com.iqser.red.service.redaction.v1.server.redaction.service;
|
||||
|
||||
import com.iqser.red.service.redaction.v1.model.ManualRedactionEntry;
|
||||
import com.iqser.red.service.redaction.v1.model.ManualRedactions;
|
||||
import com.iqser.red.service.redaction.v1.model.Rectangle;
|
||||
import com.iqser.red.service.redaction.v1.server.classification.model.Document;
|
||||
import com.iqser.red.service.redaction.v1.server.classification.model.Paragraph;
|
||||
import com.iqser.red.service.redaction.v1.server.classification.model.TextBlock;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.CellValue;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.DictionaryModel;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.Entity;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.EntityPositionSequence;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.SearchableText;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.Section;
|
||||
import com.iqser.red.service.redaction.v1.server.tableextraction.model.Cell;
|
||||
import com.iqser.red.service.redaction.v1.server.tableextraction.model.Table;
|
||||
import lombok.RequiredArgsConstructor;
|
||||
import org.apache.commons.collections4.CollectionUtils;
|
||||
import org.apache.commons.lang3.StringUtils;
|
||||
import org.springframework.stereotype.Service;
|
||||
|
||||
import java.util.ArrayList;
|
||||
import java.util.HashMap;
|
||||
import java.util.HashSet;
|
||||
@@ -26,6 +7,31 @@ import java.util.List;
|
||||
import java.util.Map;
|
||||
import java.util.Set;
|
||||
import java.util.regex.Pattern;
|
||||
import java.util.stream.Collectors;
|
||||
import java.util.stream.Stream;
|
||||
|
||||
import org.apache.commons.collections4.CollectionUtils;
|
||||
import org.apache.commons.lang3.StringUtils;
|
||||
import org.springframework.stereotype.Service;
|
||||
|
||||
import com.iqser.red.service.redaction.v1.model.ManualRedactionEntry;
|
||||
import com.iqser.red.service.redaction.v1.model.ManualRedactions;
|
||||
import com.iqser.red.service.redaction.v1.model.Rectangle;
|
||||
import com.iqser.red.service.redaction.v1.server.classification.model.Document;
|
||||
import com.iqser.red.service.redaction.v1.server.classification.model.Paragraph;
|
||||
import com.iqser.red.service.redaction.v1.server.classification.model.TextBlock;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.CellValue;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.Dictionary;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.DictionaryModel;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.Entity;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.EntityPositionSequence;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.SearchableText;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.Section;
|
||||
import com.iqser.red.service.redaction.v1.server.redaction.model.SectionSearchableTextPair;
|
||||
import com.iqser.red.service.redaction.v1.server.tableextraction.model.Cell;
|
||||
import com.iqser.red.service.redaction.v1.server.tableextraction.model.Table;
|
||||
|
||||
import lombok.RequiredArgsConstructor;
|
||||
|
||||
@Service
|
||||
@RequiredArgsConstructor
|
||||
@@ -34,19 +40,33 @@ public class EntityRedactionService {
|
||||
private final DictionaryService dictionaryService;
|
||||
private final DroolsExecutionService droolsExecutionService;
|
||||
|
||||
|
||||
public void processDocument(Document classifiedDoc, ManualRedactions manualRedactions) {
|
||||
|
||||
dictionaryService.updateDictionary();
|
||||
droolsExecutionService.updateRules();
|
||||
dictionaryService.clearLocalEntries();
|
||||
long rulesVersion = droolsExecutionService.getRulesVersion();
|
||||
|
||||
Set<Entity> documentEntities = new HashSet<>(findEntities(classifiedDoc, manualRedactions, false));
|
||||
Dictionary dictionary = dictionaryService.getThreadSafeDictionary();
|
||||
|
||||
if (dictionaryService.hasLocalEntries()) {
|
||||
Set<Entity> foundByLocal = findEntities(classifiedDoc, manualRedactions, true);
|
||||
Set<Entity> documentEntities = new HashSet<>(findEntities(classifiedDoc, manualRedactions, dictionary, false, null));
|
||||
|
||||
if (dictionary.hasLocalEntries()) {
|
||||
|
||||
Map<Integer, Set<Entity>> hintsPerSectionNumber = new HashMap<>();
|
||||
documentEntities.stream().forEach(entity -> {
|
||||
if (dictionary.isHint(entity.getType())) {
|
||||
hintsPerSectionNumber.computeIfAbsent(entity.getSectionNumber(), (x) -> new HashSet<>())
|
||||
.add(entity);
|
||||
}
|
||||
});
|
||||
|
||||
Set<Entity> foundByLocal = findEntities(classifiedDoc, manualRedactions, dictionary, true, hintsPerSectionNumber);
|
||||
// HashSet keeps the older value, but we want the new only.
|
||||
documentEntities.removeAll(foundByLocal);
|
||||
documentEntities.addAll(foundByLocal);
|
||||
|
||||
removeEntitiesContainedInLarger(documentEntities);
|
||||
}
|
||||
|
||||
for (Entity entity : documentEntities) {
|
||||
@@ -60,16 +80,25 @@ public class EntityRedactionService {
|
||||
classifiedDoc.getEntities()
|
||||
.computeIfAbsent(entry.getKey(), (x) -> new ArrayList<>())
|
||||
.add(new Entity(entity.getWord(), entity.getType(), entity.isRedaction(), entity.getRedactionReason(), entry
|
||||
.getValue(), entity.getHeadline(), entity.getMatchedRule(), entity.getSectionNumber(), entity.getLegalBasis()));
|
||||
.getValue(), entity.getHeadline(), entity.getMatchedRule(), entity.getSectionNumber(), entity
|
||||
.getLegalBasis()));
|
||||
}
|
||||
}
|
||||
|
||||
dictionaryService.updateExternalDictionary(dictionary);
|
||||
|
||||
classifiedDoc.setDictionaryVersion(dictionary.getVersion());
|
||||
classifiedDoc.setRulesVersion(rulesVersion);
|
||||
}
|
||||
|
||||
|
||||
private Set<Entity> findEntities(Document classifiedDoc, ManualRedactions manualRedactions, boolean localEntries) {
|
||||
private Set<Entity> findEntities(Document classifiedDoc, ManualRedactions manualRedactions,
|
||||
Dictionary dictionary, boolean local,
|
||||
Map<Integer, Set<Entity>> hintsPerSectionNumber) {
|
||||
|
||||
Set<Entity> documentEntities = new HashSet<>();
|
||||
int sectionNumber = 1;
|
||||
List<SectionSearchableTextPair> sectionSearchableTextPairs = new ArrayList<>();
|
||||
for (Paragraph paragraph : classifiedDoc.getParagraphs()) {
|
||||
|
||||
SearchableText searchableText = paragraph.getSearchableText();
|
||||
@@ -102,55 +131,86 @@ public class EntityRedactionService {
|
||||
searchableRow.addAll(textBlock.getSequences());
|
||||
}
|
||||
}
|
||||
Set<Entity> rowEntities = findEntities(searchableRow, table.getHeadline(), sectionNumber, localEntries);
|
||||
Set<Entity> rowEntities = findEntities(searchableRow, table.getHeadline(), sectionNumber, dictionary.getDictionaryModels(), local);
|
||||
|
||||
Section analysedRowSection = droolsExecutionService.executeRules(Section.builder()
|
||||
.dictionaryService(dictionaryService)
|
||||
.entities(rowEntities)
|
||||
sectionSearchableTextPairs.add(new SectionSearchableTextPair(Section.builder()
|
||||
.isLocal(local)
|
||||
.dictionaryTypes(dictionary.getTypes())
|
||||
.entities(hintsPerSectionNumber != null && hintsPerSectionNumber.containsKey(sectionNumber) ? Stream
|
||||
.concat(rowEntities.stream(), hintsPerSectionNumber.get(sectionNumber).stream())
|
||||
.collect(Collectors.toSet()) : rowEntities)
|
||||
.text(searchableRow.getAsStringWithLinebreaks())
|
||||
.searchText(searchableRow.toString())
|
||||
.headline(table.getHeadline())
|
||||
.sectionNumber(sectionNumber)
|
||||
.tabularData(tabularData)
|
||||
.build());
|
||||
.build(), searchableRow));
|
||||
|
||||
documentEntities.addAll(clearAndFindPositions(analysedRowSection.getEntities(), searchableRow));
|
||||
sectionNumber++;
|
||||
}
|
||||
sectionNumber++;
|
||||
}
|
||||
|
||||
addSectionToManualRedactions(paragraph.getTextBlocks(), manualRedactions, paragraph.getHeadline(), sectionNumber);
|
||||
Set<Entity> entities = findEntities(searchableText, paragraph.getHeadline(), sectionNumber, localEntries);
|
||||
Section analysedSection = droolsExecutionService.executeRules(Section.builder()
|
||||
.dictionaryService(dictionaryService)
|
||||
.entities(entities)
|
||||
Set<Entity> entities = findEntities(searchableText, paragraph.getHeadline(), sectionNumber, dictionary.getDictionaryModels(), local);
|
||||
|
||||
sectionSearchableTextPairs.add(new SectionSearchableTextPair(Section.builder()
|
||||
.isLocal(local)
|
||||
.dictionaryTypes(dictionary.getTypes())
|
||||
.entities(hintsPerSectionNumber != null && hintsPerSectionNumber.containsKey(sectionNumber) ? Stream
|
||||
.concat(entities.stream(), hintsPerSectionNumber.get(sectionNumber).stream())
|
||||
.collect(Collectors.toSet()) : entities)
|
||||
.text(searchableText.getAsStringWithLinebreaks())
|
||||
.searchText(searchableText.toString())
|
||||
.headline(paragraph.getHeadline())
|
||||
.sectionNumber(sectionNumber)
|
||||
.build());
|
||||
.build(), searchableText));
|
||||
|
||||
documentEntities.addAll(clearAndFindPositions(analysedSection.getEntities(), searchableText));
|
||||
sectionNumber++;
|
||||
}
|
||||
|
||||
sectionSearchableTextPairs.forEach(sectionSearchableTextPair -> {
|
||||
Section analysedRowSection = droolsExecutionService.executeRules(sectionSearchableTextPair.getSection());
|
||||
documentEntities.addAll(clearAndFindPositions(analysedRowSection.getEntities(), sectionSearchableTextPair.getSearchableText(), dictionary));
|
||||
|
||||
analysedRowSection.getLocalDictionaryAdds().keySet().forEach(key -> {
|
||||
if (dictionary.isRecommendation(key)){
|
||||
analysedRowSection.getLocalDictionaryAdds().get(key).forEach(value -> {
|
||||
if (!dictionary.containsValue(key, value)){
|
||||
dictionary.getLocalAccessMap().get(key).getLocalEntries().add(value);
|
||||
}
|
||||
});
|
||||
} else {
|
||||
analysedRowSection.getLocalDictionaryAdds().get(key).forEach( value -> {
|
||||
dictionary.getLocalAccessMap().get(key).getLocalEntries().add(value);
|
||||
});
|
||||
}
|
||||
});
|
||||
|
||||
|
||||
});
|
||||
|
||||
return documentEntities;
|
||||
}
|
||||
|
||||
|
||||
private Set<Entity> clearAndFindPositions(Set<Entity> entities, SearchableText text) {
|
||||
private Set<Entity> clearAndFindPositions(Set<Entity> entities, SearchableText text, Dictionary dictionary) {
|
||||
|
||||
removeEntitiesContainedInLarger(entities);
|
||||
|
||||
for (Entity entity : entities) {
|
||||
entity.setPositionSequences(text.getSequences(entity.getWord(), dictionaryService.isCaseInsensitiveDictionary(entity.getType()), entity.getTargetSequences()));
|
||||
if (entity.getPositionSequences().isEmpty()) {
|
||||
entity.setPositionSequences(text.getSequences(entity.getWord(), dictionary.isCaseInsensitiveDictionary(entity
|
||||
.getType()), entity.getTargetSequences()));
|
||||
}
|
||||
}
|
||||
|
||||
return entities;
|
||||
}
|
||||
|
||||
|
||||
private Set<Entity> findEntities(SearchableText searchableText, String headline, int sectionNumber, boolean local) {
|
||||
private Set<Entity> findEntities(SearchableText searchableText, String headline, int sectionNumber,
|
||||
List<DictionaryModel> dictionary, boolean local) {
|
||||
|
||||
Set<Entity> found = new HashSet<>();
|
||||
String searchableString = searchableText.toString();
|
||||
@@ -159,7 +219,7 @@ public class EntityRedactionService {
|
||||
}
|
||||
|
||||
String lowercaseInputString = searchableString.toLowerCase();
|
||||
for (DictionaryModel model : dictionaryService.getDictionary()) {
|
||||
for (DictionaryModel model : dictionary) {
|
||||
if (model.isCaseInsensitive()) {
|
||||
found.addAll(find(lowercaseInputString, model.getValues(local), model.getType(), headline, sectionNumber));
|
||||
} else {
|
||||
@@ -204,7 +264,8 @@ public class EntityRedactionService {
|
||||
for (Entity word : entities) {
|
||||
for (Entity inner : entities) {
|
||||
if (inner.getWord().length() < word.getWord()
|
||||
.length() && inner.getStart() >= word.getStart() && inner.getEnd() <= word.getEnd() && word != inner) {
|
||||
.length() && inner.getStart() >= word.getStart() && inner.getEnd() <= word.getEnd() && word != inner && word
|
||||
.getSectionNumber() == inner.getSectionNumber()) {
|
||||
wordsToRemove.add(inner);
|
||||
}
|
||||
}
|
||||
@@ -213,7 +274,8 @@ public class EntityRedactionService {
|
||||
}
|
||||
|
||||
|
||||
private void addSectionToManualRedactions(List<TextBlock> textBlocks, ManualRedactions manualRedactions, String section, int sectionNumber) {
|
||||
private void addSectionToManualRedactions(List<TextBlock> textBlocks, ManualRedactions manualRedactions,
|
||||
String section, int sectionNumber) {
|
||||
|
||||
if (manualRedactions == null || manualRedactions.getEntriesToAdd().isEmpty()) {
|
||||
return;
|
||||
|
||||
+12
@@ -0,0 +1,12 @@
|
||||
package com.iqser.red.service.redaction.v1.server.redaction.utils;
|
||||
|
||||
import java.util.regex.Pattern;
|
||||
|
||||
import lombok.experimental.UtilityClass;
|
||||
|
||||
@UtilityClass
|
||||
public class Patterns {
|
||||
|
||||
public static Pattern AUTHOR_TABLE_SPITTER = Pattern.compile("((((di)|(van)) )|[A-Z]’)?[A-ZÄÖÜ][\\wäöüéèê]{2,}( ?[A-ZÄÖÜ]{1,2}\\.)+|((((di)|(van)) )|[A-Z]’)?[A-ZÄÖÜ][\\wäöüéèê]{2,}( ?[A-ZÄÖÜ]{1,2} )+");
|
||||
|
||||
}
|
||||
+5
@@ -270,6 +270,7 @@ public class AnnotationHighlightService {
|
||||
.type(entity.getType())
|
||||
.redacted(entity.isRedaction())
|
||||
.isHint(isHint(entity))
|
||||
.isRecommendation(isRecommendation(entity))
|
||||
.section(entity.getHeadline())
|
||||
.sectionNumber(entity.getSectionNumber())
|
||||
.matchedRule(entity.getMatchedRule())
|
||||
@@ -425,6 +426,10 @@ public class AnnotationHighlightService {
|
||||
return dictionaryService.isHint(entity.getType());
|
||||
}
|
||||
|
||||
private boolean isRecommendation(Entity entity) {
|
||||
return dictionaryService.isRecommendation(entity.getType());
|
||||
}
|
||||
|
||||
|
||||
private void drawSectionFrames(PDDocument document, Document classifiedDoc, boolean flatRedaction, PDPage pdPage,
|
||||
int page) throws IOException {
|
||||
|
||||
+58
-3
@@ -77,6 +77,11 @@ public class RedactionIntegrationTest {
|
||||
private static final String PUBLISHED_INFORMATION = "published_information";
|
||||
private static final String TEST_METHOD = "test_method";
|
||||
|
||||
private static final String RECOMMENDATION_AUTHOR = "recommendation_CBI_author";
|
||||
private static final String RECOMMENDATION_ADDRESS = "recommendation_CBI_address";
|
||||
|
||||
private static final String FALSE_POSITIVE = "false_positive";
|
||||
|
||||
private static final String PII = "PII";
|
||||
|
||||
@Autowired
|
||||
@@ -92,6 +97,7 @@ public class RedactionIntegrationTest {
|
||||
private final Map<String, String> typeColorMap = new HashMap<>();
|
||||
private final Map<String, Boolean> hintTypeMap = new HashMap<>();
|
||||
private final Map<String, Boolean> caseInSensitiveMap = new HashMap<>();
|
||||
private final Map<String, Boolean> recommendationTypeMap = new HashMap<>();
|
||||
private final Colors colors = new Colors();
|
||||
|
||||
@TestConfiguration
|
||||
@@ -137,6 +143,9 @@ public class RedactionIntegrationTest {
|
||||
when(dictionaryClient.getDictionaryForType(PUBLISHED_INFORMATION)).thenReturn(getDictionaryResponse(PUBLISHED_INFORMATION));
|
||||
when(dictionaryClient.getDictionaryForType(TEST_METHOD)).thenReturn(getDictionaryResponse(TEST_METHOD));
|
||||
when(dictionaryClient.getDictionaryForType(PII)).thenReturn(getDictionaryResponse(PII));
|
||||
when(dictionaryClient.getDictionaryForType(RECOMMENDATION_AUTHOR)).thenReturn(getDictionaryResponse(RECOMMENDATION_AUTHOR));
|
||||
when(dictionaryClient.getDictionaryForType(RECOMMENDATION_ADDRESS)).thenReturn(getDictionaryResponse(RECOMMENDATION_ADDRESS));
|
||||
when(dictionaryClient.getDictionaryForType(FALSE_POSITIVE)).thenReturn(getDictionaryResponse(FALSE_POSITIVE));
|
||||
when(dictionaryClient.getColors()).thenReturn(colors);
|
||||
}
|
||||
|
||||
@@ -198,6 +207,21 @@ public class RedactionIntegrationTest {
|
||||
.stream()
|
||||
.map(this::cleanDictionaryEntry)
|
||||
.collect(Collectors.toSet()));
|
||||
dictionary.computeIfAbsent(RECOMMENDATION_AUTHOR, v -> new ArrayList<>())
|
||||
.addAll(ResourceLoader.load("dictionaries/recommendation_CBI_author.txt")
|
||||
.stream()
|
||||
.map(this::cleanDictionaryEntry)
|
||||
.collect(Collectors.toSet()));
|
||||
dictionary.computeIfAbsent(RECOMMENDATION_ADDRESS, v -> new ArrayList<>())
|
||||
.addAll(ResourceLoader.load("dictionaries/recommendation_CBI_address.txt")
|
||||
.stream()
|
||||
.map(this::cleanDictionaryEntry)
|
||||
.collect(Collectors.toSet()));
|
||||
dictionary.computeIfAbsent(FALSE_POSITIVE, v -> new ArrayList<>())
|
||||
.addAll(ResourceLoader.load("dictionaries/false_positive.txt")
|
||||
.stream()
|
||||
.map(this::cleanDictionaryEntry)
|
||||
.collect(Collectors.toSet()));
|
||||
}
|
||||
|
||||
|
||||
@@ -220,7 +244,9 @@ public class RedactionIntegrationTest {
|
||||
typeColorMap.put(PUBLISHED_INFORMATION, "#85ebff");
|
||||
typeColorMap.put(TEST_METHOD, "#91fae8");
|
||||
typeColorMap.put(PII, "#66ccff");
|
||||
|
||||
typeColorMap.put(RECOMMENDATION_AUTHOR, "#8df06c");
|
||||
typeColorMap.put(RECOMMENDATION_ADDRESS, "#8df06c");
|
||||
typeColorMap.put(FALSE_POSITIVE, "#ffffff");
|
||||
|
||||
hintTypeMap.put(VERTEBRATE, true);
|
||||
hintTypeMap.put(ADDRESS, false);
|
||||
@@ -233,6 +259,9 @@ public class RedactionIntegrationTest {
|
||||
hintTypeMap.put(PUBLISHED_INFORMATION, true);
|
||||
hintTypeMap.put(TEST_METHOD, true);
|
||||
hintTypeMap.put(PII, false);
|
||||
hintTypeMap.put(RECOMMENDATION_AUTHOR, false);
|
||||
hintTypeMap.put(RECOMMENDATION_ADDRESS, false);
|
||||
hintTypeMap.put(FALSE_POSITIVE, true);
|
||||
|
||||
caseInSensitiveMap.put(VERTEBRATE, true);
|
||||
caseInSensitiveMap.put(ADDRESS, false);
|
||||
@@ -245,6 +274,24 @@ public class RedactionIntegrationTest {
|
||||
caseInSensitiveMap.put(PUBLISHED_INFORMATION, true);
|
||||
caseInSensitiveMap.put(TEST_METHOD, false);
|
||||
caseInSensitiveMap.put(PII, false);
|
||||
caseInSensitiveMap.put(RECOMMENDATION_AUTHOR, false);
|
||||
caseInSensitiveMap.put(RECOMMENDATION_ADDRESS, false);
|
||||
caseInSensitiveMap.put(FALSE_POSITIVE, false);
|
||||
|
||||
recommendationTypeMap.put(VERTEBRATE, false);
|
||||
recommendationTypeMap.put(ADDRESS, false);
|
||||
recommendationTypeMap.put(AUTHOR, false);
|
||||
recommendationTypeMap.put(SPONSOR, false);
|
||||
recommendationTypeMap.put(NO_REDACTION_INDICATOR, false);
|
||||
recommendationTypeMap.put(REDACTION_INDICATOR, false);
|
||||
recommendationTypeMap.put(HINT_ONLY, false);
|
||||
recommendationTypeMap.put(MUST_REDACT, false);
|
||||
recommendationTypeMap.put(PUBLISHED_INFORMATION, false);
|
||||
recommendationTypeMap.put(TEST_METHOD, false);
|
||||
recommendationTypeMap.put(PII, false);
|
||||
recommendationTypeMap.put(RECOMMENDATION_AUTHOR, true);
|
||||
recommendationTypeMap.put(RECOMMENDATION_ADDRESS, true);
|
||||
recommendationTypeMap.put(FALSE_POSITIVE, false);
|
||||
|
||||
colors.setDefaultColor("#acfc00");
|
||||
colors.setNotRedacted("#cccccc");
|
||||
@@ -262,6 +309,7 @@ public class RedactionIntegrationTest {
|
||||
.hexColor(typeColor.getValue())
|
||||
.isHint(hintTypeMap.get(typeColor.getKey()))
|
||||
.isCaseInsensitive(caseInSensitiveMap.get(typeColor.getKey()))
|
||||
.isRecommendation(recommendationTypeMap.get(typeColor.getKey()))
|
||||
.build())
|
||||
|
||||
.collect(Collectors.toList());
|
||||
@@ -275,6 +323,7 @@ public class RedactionIntegrationTest {
|
||||
.entries(dictionary.get(type))
|
||||
.isHint(hintTypeMap.get(type))
|
||||
.isCaseInsensitive(caseInSensitiveMap.get(type))
|
||||
.isRecommendation(recommendationTypeMap.get(type))
|
||||
.build();
|
||||
}
|
||||
|
||||
@@ -333,7 +382,7 @@ public class RedactionIntegrationTest {
|
||||
|
||||
System.out.println("redactionTest");
|
||||
long start = System.currentTimeMillis();
|
||||
ClassPathResource pdfFileResource = new ClassPathResource("files/Primicarb/74 Pirimicarb_RAR_01_Volume_1_2017-12-04.pdf");
|
||||
ClassPathResource pdfFileResource = new ClassPathResource("files/Fludioxonil/52 Fludioxonil_RAR_07_Volume_3CA_B-5_2018-02-21.pdf");
|
||||
|
||||
RedactionRequest request = RedactionRequest.builder()
|
||||
.document(IOUtils.toByteArray(pdfFileResource.getInputStream()))
|
||||
@@ -342,6 +391,12 @@ public class RedactionIntegrationTest {
|
||||
|
||||
RedactionResult result = redactionController.redact(request);
|
||||
|
||||
result.getRedactionLog().getRedactionLogEntry().forEach(entry -> {
|
||||
if(entry.isRecommendation()){
|
||||
System.out.println(entry.getValue());
|
||||
}
|
||||
});
|
||||
|
||||
try (FileOutputStream fileOutputStream = new FileOutputStream("/tmp/Redacted.pdf")) {
|
||||
fileOutputStream.write(result.getDocument());
|
||||
}
|
||||
@@ -467,7 +522,7 @@ public class RedactionIntegrationTest {
|
||||
public void htmlTablesTest() throws IOException {
|
||||
|
||||
System.out.println("htmlTablesTest");
|
||||
ClassPathResource pdfFileResource = new ClassPathResource("files/Minimal Examples/line_breaks.pdf");
|
||||
ClassPathResource pdfFileResource = new ClassPathResource("files/Fludioxonil/52 Fludioxonil_RAR_07_Volume_3CA_B-5_2018-02-21.pdf");
|
||||
|
||||
RedactionRequest request = RedactionRequest.builder()
|
||||
.document(IOUtils.toByteArray(pdfFileResource.getInputStream()))
|
||||
|
||||
+29
-2
@@ -14,8 +14,11 @@ import java.util.ArrayList;
|
||||
import java.util.Arrays;
|
||||
import java.util.Collections;
|
||||
import java.util.HashSet;
|
||||
import java.util.List;
|
||||
import java.util.Set;
|
||||
import java.util.concurrent.atomic.AtomicLong;
|
||||
import java.util.regex.Matcher;
|
||||
import java.util.regex.Pattern;
|
||||
|
||||
import org.apache.commons.io.IOUtils;
|
||||
import org.apache.pdfbox.pdmodel.PDDocument;
|
||||
@@ -446,7 +449,7 @@ public class EntityRedactionServiceTest {
|
||||
" when\n" +
|
||||
" Section(rowEquals(\"Vertebrate study Y/N\", \"N\") || rowEquals(\"Vertebrate study Y/N\", \"No\"))\n" +
|
||||
" then\n" +
|
||||
" section.redactNotCell(\"Author(s)\", 8, \"name\", \"Not redacted because row is not a vertebrate study\");\n" +
|
||||
" section.redactNotCell(\"Author(s)\", 8, \"name\", false, \"Not redacted because row is not a vertebrate study\");\n" +
|
||||
" section.redactNot(\"address\", 8, \"Not redacted because row is not a vertebrate study\");\n" +
|
||||
" section.highlightCell(\"Vertebrate study Y/N\", 8, \"hint_only\");\n" +
|
||||
" end\n" +
|
||||
@@ -455,7 +458,7 @@ public class EntityRedactionServiceTest {
|
||||
" Section(rowEquals(\"Vertebrate study Y/N\", \"Y\") || rowEquals(\"Vertebrate study Y/N\", " +
|
||||
"\"Yes\"))\n" +
|
||||
" then\n" +
|
||||
" section.redactCell(\"Author(s)\", 9, \"name\", \"Redacted because row is a vertebrate study\", \"Reg (EC) No 1107/2009 Art. 63 (2g)\");\n" +
|
||||
" section.redactCell(\"Author(s)\", 9, \"name\", false, \"Redacted because row is a vertebrate study\", \"Reg (EC) No 1107/2009 Art. 63 (2g)\");\n" +
|
||||
" section.redact(\"address\", 9, \"Redacted because row is a vertebrate study\", \"Reg (EC) No" +
|
||||
" 1107/2009 Art. 63 (2g)\");\n" +
|
||||
" section.highlightCell(\"Vertebrate study Y/N\", 9, \"must_redact\");\n" +
|
||||
@@ -510,4 +513,28 @@ public class EntityRedactionServiceTest {
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@Test
|
||||
public void testAuthorSplitting(){
|
||||
|
||||
String word = "Porch JR, " + "Kendall TZ, " + "Krueger HO";
|
||||
|
||||
word.replaceAll(",", " ").replaceAll(" ", " ");
|
||||
|
||||
Pattern pattern = Pattern.compile("[A-ZÄÖÜ][\\wäöüéèê]{2,}( [A-ZÄÖÜ]{1,2}\\.)+");
|
||||
Matcher matcher = pattern.matcher(word);
|
||||
|
||||
List<String> allMatches = new ArrayList<>();
|
||||
while (matcher.find()) {
|
||||
allMatches.add(matcher.group());
|
||||
}
|
||||
|
||||
for(String name: allMatches) {
|
||||
if(name.length() >= 3) {
|
||||
System.out.println(name);
|
||||
// dictionaryService.addToLocalDictionary(type, name);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
}
|
||||
+1
-1
@@ -8586,4 +8586,4 @@ Zoriki Hosomi R.
|
||||
Zoriki Hosomi Rosana
|
||||
Zuberer D
|
||||
Zubrod J
|
||||
Zwicker R.E.
|
||||
Zwicker R.E.
|
||||
+10
@@ -0,0 +1,10 @@
|
||||
Long-term
|
||||
Brown liquid
|
||||
Brown solid
|
||||
Hand-held
|
||||
Manual-Hand held
|
||||
Manual-Hand held
|
||||
Weight:
|
||||
Sprague
|
||||
Weight and length
|
||||
Aeration: Gentle
|
||||
-1
@@ -1 +0,0 @@
|
||||
determination of residues
|
||||
|
||||
-1
@@ -167,7 +167,6 @@ sheepshead minnow
|
||||
sheepshead minnows
|
||||
shrew
|
||||
shrews
|
||||
Singh
|
||||
sorex araneus
|
||||
spea multiplicata
|
||||
spotted march frog
|
||||
|
||||
+82
-66
@@ -56,7 +56,8 @@ rule "6: Not redacted because Vertebrate Study = N"
|
||||
when
|
||||
Section(rowEquals("Vertebrate study Y/N", "N") || rowEquals("Vertebrate study Y/N", "No"))
|
||||
then
|
||||
section.redactNotCell("Author(s)", 6, "CBI_author", "Not redacted because row is not a vertebrate study");
|
||||
section.redactNotCell("Author(s)", 6, "CBI_author", true, "Not redacted because row is not a vertebrate study");
|
||||
section.redactNot("CBI_author", 6, "Not redacted because row is not a vertebrate study");
|
||||
section.redactNot("CBI_address", 6, "Not redacted because row is not a vertebrate study");
|
||||
section.highlightCell("Vertebrate study Y/N", 6, "hint_only");
|
||||
end
|
||||
@@ -75,7 +76,7 @@ rule "8: Redact Authors and Addresses in Reference Table if it is a Vertebrate s
|
||||
when
|
||||
Section(rowEquals("Vertebrate study Y/N", "Y") || rowEquals("Vertebrate study Y/N", "Yes"))
|
||||
then
|
||||
section.redactCell("Author(s)", 8, "CBI_author", "Redacted because row is a vertebrate study", "Reg (EC) No 1107/2009 Art. 63 (2g)");
|
||||
section.redactCell("Author(s)", 8, "CBI_author", true, "Redacted because row is a vertebrate study", "Reg (EC) No 1107/2009 Art. 63 (2g)");
|
||||
section.redact("CBI_address", 8, "Redacted because row is a vertebrate study", "Reg (EC) No 1107/2009 Art. 63 (2g)");
|
||||
section.highlightCell("Vertebrate study Y/N", 8, "must_redact");
|
||||
end
|
||||
@@ -95,10 +96,12 @@ rule "10: Redact determination of residues"
|
||||
Section(searchText.toLowerCase.contains("determination of residues") && (
|
||||
searchText.toLowerCase.contains("livestock") ||
|
||||
searchText.toLowerCase.contains("live stock") ||
|
||||
searchText.toLowerCase.contains("egg") ||
|
||||
searchText.toLowerCase.contains("milk") ||
|
||||
searchText.toLowerCase.contains("tissue") ||
|
||||
searchText.toLowerCase.contains("liver") ||
|
||||
searchText.toLowerCase.contains("muscle") ||
|
||||
searchText.toLowerCase.contains("bovine") ||
|
||||
searchText.toLowerCase.contains("ruminant")
|
||||
searchText.toLowerCase.contains("ruminant") ||
|
||||
searchText.toLowerCase.contains("ruminants")
|
||||
))
|
||||
then
|
||||
section.redact("CBI_author", 10, "Determination of residues was found.", "Reg (EC) No 1107/2009 Art. 63 (2g)");
|
||||
@@ -106,25 +109,38 @@ rule "10: Redact determination of residues"
|
||||
section.addHintAnnotation("determination of residues", "must_redact");
|
||||
section.addHintAnnotation("livestock", "must_redact");
|
||||
section.addHintAnnotation("live stock", "must_redact");
|
||||
section.addHintAnnotation("egg", "must_redact");
|
||||
section.addHintAnnotation("milk", "must_redact");
|
||||
section.addHintAnnotation("tissue", "must_redact");
|
||||
section.addHintAnnotation("liver", "must_redact");
|
||||
section.addHintAnnotation("muscle", "must_redact");
|
||||
section.addHintAnnotation("bovine", "must_redact");
|
||||
section.addHintAnnotation("ruminant", "must_redact");
|
||||
section.addHintAnnotation("ruminants", "must_redact");
|
||||
end
|
||||
|
||||
|
||||
rule "11: Redact if CTL/* or BL/* was found"
|
||||
when
|
||||
Section(searchText.contains("CTL/") || searchText.contains("BL/"))
|
||||
then
|
||||
section.redact("CBI_author", 11, "Laboraty for vertebrate studies found", "Reg (EC) No 1107/2009 Art. 63 (2g)");
|
||||
section.redact("CBI_address", 11, "Laboraty for vertebrate studies found", "Reg (EC) No 1107/2009 Art. 63 (2g)");
|
||||
section.addHintAnnotation("CTL", "must_redact");
|
||||
section.addHintAnnotation("BL", "must_redact");
|
||||
end
|
||||
|
||||
|
||||
// --------------------------------------- PII rules -------------------------------------------------------------------
|
||||
|
||||
|
||||
rule "11: Redacted PII Personal Identification Information"
|
||||
rule "12: Redacted PII Personal Identification Information"
|
||||
when
|
||||
Section(matchesType("PII"))
|
||||
then
|
||||
section.redact("PII", 11, "PII (Personal Identification Information) found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redact("PII", 12, "PII (Personal Identification Information) found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
end
|
||||
|
||||
|
||||
rule "12: Redact contact information"
|
||||
rule "13: Redact contact information"
|
||||
when
|
||||
Section(text.contains("Contact point:")
|
||||
|| text.contains("Phone:")
|
||||
@@ -142,96 +158,96 @@ rule "12: Redact contact information"
|
||||
|| text.contains("Telephone:")
|
||||
|| text.contains("European contact:"))
|
||||
then
|
||||
section.redactLineAfter("Contact point:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Phone:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Tel.:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Tel:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("E-mail:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Email:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("e-mail:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("E-mail address:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Contact:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Alternative contact:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone number:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone No:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax number:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("No:", "Fax", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("Contact:", "Tel.:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("European contact:", "PII", 12, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Contact point:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Phone:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Tel.:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Tel:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("E-mail:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Email:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("e-mail:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("E-mail address:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Contact:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Alternative contact:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone number:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone No:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax number:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("No:", "Fax", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("Contact:", "Tel.:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("European contact:", "PII", 13, true, "Contact information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
end
|
||||
|
||||
|
||||
rule "13: Redact contact information if applicant is found"
|
||||
rule "14: Redact contact information if applicant is found"
|
||||
when
|
||||
Section(headlineContainsWord("applicant") || text.contains("Applicant") || headlineContainsWord("Primary contact") || headlineContainsWord("Alternative contact") || text.contains("Contact:") || text.contains("Telephone number:"))
|
||||
then
|
||||
section.redactLineAfter("Contact point:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Phone:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Tel.:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Tel:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("E-mail:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Email:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("e-mail:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("E-mail address:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Contact:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Alternative contact:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone number:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone No:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax number:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("No:", "Fax", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("Contact:", "Tel.:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("European contact:", "PII", 13, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Contact point:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Phone:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Tel.:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Tel:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("E-mail:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Email:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("e-mail:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("E-mail address:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Contact:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Alternative contact:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone number:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone No:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax number:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("No:", "Fax", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("Contact:", "Tel.:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("European contact:", "PII", 14, true, "Applicant information was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
end
|
||||
|
||||
|
||||
rule "14: Redact contact information if Producer is found"
|
||||
rule "15: Redact contact information if Producer is found"
|
||||
when
|
||||
Section(text.toLowerCase().contains("producer of the plant protection") || text.toLowerCase().contains("producer of the active substance") || text.contains("Manufacturer of the active substance") || text.contains("Manufacturer:") || text.contains("Producer or producers of the active substance"))
|
||||
then
|
||||
section.redactLineAfter("Contact:", "PII", 14, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone:", "PII", 14, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Phone:", "PII", 14, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax:", "PII", 14, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("E-mail:", "PII", 14, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Contact:", "PII", 14, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax number:", "PII", 14, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone number:", "PII", 14, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Tel:", "PII", 14, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("No:", "Fax", "PII", 14, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Contact:", "PII", 15, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone:", "PII", 15, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Phone:", "PII", 15, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax:", "PII", 15, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("E-mail:", "PII", 15, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Contact:", "PII", 15, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Fax number:", "PII", 15, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Telephone number:", "PII", 15, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLineAfter("Tel:", "PII", 15, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("No:", "Fax", "PII", 15, true, "Producer was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
end
|
||||
|
||||
|
||||
rule "15: Redact AUTHOR(S)"
|
||||
rule "16: Redact AUTHOR(S)"
|
||||
when
|
||||
Section(searchText.contains("AUTHOR(S):"))
|
||||
then
|
||||
section.redactLinesBetween("AUTHOR(S):", "COMPLETION DATE:", "PII", 15, true, "AUTHOR(S) was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactLinesBetween("AUTHOR(S):", "COMPLETION DATE:", "PII", 16, true, "AUTHOR(S) was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
end
|
||||
|
||||
|
||||
rule "16: Redact PERFORMING LABORATORY"
|
||||
rule "17: Redact PERFORMING LABORATORY"
|
||||
when
|
||||
Section(searchText.contains("PERFORMING LABORATORY:"))
|
||||
then
|
||||
section.redactBetween("PERFORMING LABORATORY:", "LABORATORY PROJECT ID:", "PII", 16, true, "PERFORMING LABORATORY was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("PERFORMING LABORATORY:", "LABORATORY PROJECT ID:", "PII", 17, true, "PERFORMING LABORATORY was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
end
|
||||
|
||||
|
||||
rule "17: Redact On behalf of Sequani Ltd.:"
|
||||
rule "18: Redact On behalf of Sequani Ltd.:"
|
||||
when
|
||||
Section(searchText.contains("On behalf of Sequani Ltd.: Name Title"))
|
||||
then
|
||||
section.redactBetween("On behalf of Sequani Ltd.: Name Title", "On behalf of", "PII", 17, false , "PII (Personal Identification Information) found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("On behalf of Sequani Ltd.: Name Title", "On behalf of", "PII", 18, false , "PII (Personal Identification Information) found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
end
|
||||
|
||||
|
||||
rule "18: Redact On behalf of Syngenta Ltd.:"
|
||||
rule "19: Redact On behalf of Syngenta Ltd.:"
|
||||
when
|
||||
Section(searchText.contains("On behalf of Syngenta Ltd.: Name Title"))
|
||||
then
|
||||
section.redactBetween("On behalf of Syngenta Ltd.: Name Title", "Study dates", "PII", 18, false , "PII (Personal Identification Information) found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
section.redactBetween("On behalf of Syngenta Ltd.: Name Title", "Study dates", "PII", 19, false , "PII (Personal Identification Information) found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
|
||||
end
|
||||
Reference in New Issue
Block a user