Compare commits

...
Author SHA1 Message Date
cschabert 21a8af5ca5 add build before sonar job 2022-01-12 13:32:47 +01:00
Dominique Eiflaender 9c9583067f Pull request #316: RED-2440: Integrated image-service-v2
Merge in RED/redaction-service from RED-2440 to master

* commit 'dee1aa1f01085e585bb3126b7883bd3d01090f17':
  RED-2440: Integrated image-service-v2
2021-12-22 10:40:04 +01:00
deiflaender dee1aa1f01 RED-2440: Integrated image-service-v2 2021-12-22 10:35:13 +01:00
Ali Oezyetimoglu db16f8c1da Pull request #314: RED-3127: Upgrade log4j to 2.17.0
Merge in RED/redaction-service from RED-3127-rs1 to master

* commit '6911c5cdd5a0e559f4abfbd083b29aca9fbae9d9':
  RED-3127: Upgrade log4j to 2.17.0
2021-12-21 12:17:40 +01:00
aoezyetimoglu 6911c5cdd5 RED-3127: Upgrade log4j to 2.17.0 2021-12-21 12:00:24 +01:00
Timo Bejan 37c3814ebd Pull request #313: condition fix
Merge in RED/redaction-service from redaction-log-merge-service-test to master

* commit 'e8ae8728f3abd82cacd641144406f9047ca9c262':
  condition fix
2021-12-21 11:07:37 +01:00
Timo Bejan e8ae8728f3 condition fix 2021-12-21 11:18:37 +02:00
Timo Bejan b0415adaf4 Pull request #312: Redaction log merge service test
Merge in RED/redaction-service from redaction-log-merge-service-test to master

* commit '9e64773d0db262481f8552678a6e6b86d81d93c4':
  pmd
  skip remove from dict entries from merge
2021-12-21 10:17:54 +01:00
Timo Bejan 9e64773d0d pmd 2021-12-21 11:08:15 +02:00
Timo Bejan 3145195d63 skip remove from dict entries from merge 2021-12-21 11:05:47 +02:00
Dominique Eiflaender 88b1274cd3 Pull request #311: RED-3117: Enbled to ignore invalid entries at addToDictionary for automated pushing entries in analysis
Merge in RED/redaction-service from RED-3117 to master

* commit '0296745efc0e4786386811d0037e2cae6ae511c4':
  RED-3117: Enbled to ignore invalid entries at addToDictionary for automated pushing entries in analysis
2021-12-20 11:58:34 +01:00
deiflaender 0296745efc RED-3117: Enbled to ignore invalid entries at addToDictionary for automated pushing entries in analysis 2021-12-20 11:53:36 +01:00
Dominique Eiflaender 60a0adb843 Pull request #310: RED-3114: Fixed unreliable redactions on rotated pages
Merge in RED/redaction-service from RED-3114 to master

* commit 'f1071de3a9ea9a3b34798f21ee9589262ef4f32b':
  RED-3114: Fixed unreliable redactions on rotated pages
2021-12-17 16:00:18 +01:00
deiflaender f1071de3a9 RED-3114: Fixed unreliable redactions on rotated pages 2021-12-17 15:55:09 +01:00
Ali Oezyetimoglu 681d17ad95 Pull request #309: RED-3116: Fix missing relativePath in mvn projects to leads to non working sync on lastest intellij
Merge in RED/redaction-service from RED-3116-rs1 to master

* commit '8deb24a5342c1c7a34fa6235e3d68f8161d884e4':
  RED-3116: Fix missing relativePath in mvn projects to leads to non working sync on lastest intellij
2021-12-17 13:53:14 +01:00
aoezyetimoglu 8deb24a534 RED-3116: Fix missing relativePath in mvn projects to leads to non working sync on lastest intellij 2021-12-17 13:10:43 +01:00
Ali Oezyetimoglu 98443f50ec Pull request #308: RED-3107 rs1
Merge in RED/redaction-service from RED-3107-rs1 to master

* commit '7d75961df45de93cfb2a708b640703dbd5693f40':
  RED-3107: Missing headline for tables appears as inconsistent text in report
  RED-3106: Upgrade log4j to 2.16.0
2021-12-17 12:46:53 +01:00
aoezyetimoglu 7d75961df4 RED-3107: Missing headline for tables appears as inconsistent text in report 2021-12-17 12:00:14 +01:00
aoezyetimoglu 3c1f4b4853 Merge branch 'master' of ssh://git.iqser.com:2222/red/redaction-service 2021-12-17 11:52:52 +01:00
Dominique Eiflaender c9e74f4ff9 Pull request #307: RED-3105: Fixed change computation
Merge in RED/redaction-service from RED-3105 to master

* commit '19dcf0a67434442b2dd578523bbc5efa49c644e8':
  RED-3105: Fixed change computation
2021-12-16 14:22:55 +01:00
deiflaender 19dcf0a674 RED-3105: Fixed change computation 2021-12-16 14:17:04 +01:00
Philipp Schramm c46c41b790 Pull request #306: RED-3067 Bugfix to show redactions on rotated pages correctly
Merge in RED/redaction-service from RED-3067 to master

* commit 'f49782438461ec34e6e8c0ccf88b3017755e593d':
  RED-3067 Bugfix to show redactions on rotated pages correctly and fixed getting tmp directory
  RED-3067 Bugfix to show redactions on rotated pages correctly
2021-12-16 14:14:40 +01:00
Philipp Schramm f497824384 RED-3067 Bugfix to show redactions on rotated pages correctly and fixed getting tmp directory 2021-12-16 14:08:05 +01:00
Philipp Schramm f7fbe8f0f6 RED-3067 Bugfix to show redactions on rotated pages correctly 2021-12-16 12:43:17 +01:00
Ali Oezyetimoglu e8dce509f3 Pull request #303: RED-3106: Upgrade log4j to 2.16.0
Merge in RED/redaction-service from RED-3106-rs1 to master

* commit '9346cc701e1601b6c9d44e41de9fc193fbc81b1e':
  RED-3106: Upgrade log4j to 2.16.0
2021-12-16 09:57:54 +01:00
aoezyetimoglu b125de2b55 RED-3106: Upgrade log4j to 2.16.0 2021-12-16 09:52:21 +01:00
aoezyetimoglu 9346cc701e RED-3106: Upgrade log4j to 2.16.0 2021-12-16 09:44:04 +01:00
Dominique Eiflaender 1987e7b430 Pull request #302: RED-3025: Ported code to ignore hints
Merge in RED/redaction-service from RED-3025 to master

* commit '010a3ee6ab7f06297c2c37691bcac2f7019fb3a0':
  RED-3025: Ported code to ignore hints
2021-12-15 13:26:48 +01:00
deiflaender 010a3ee6ab RED-3025: Ported code to ignore hints 2021-12-15 13:22:28 +01:00
Philipp Schramm 358f8814cd Pull request #300: RED-3032 Bugfix: Throw NotFoundException in case section grid was not found
Merge in RED/redaction-service from bugfix/RED-3032 to master

* commit '9fb4024fb7dfe7ae3f92f5c17decf15fbac58451':
  RED-3032 Bugfix: Throw NotFoundException in case section grid was not found
2021-12-15 09:05:10 +01:00
Philipp Schramm 9fb4024fb7 RED-3032 Bugfix: Throw NotFoundException in case section grid was not found 2021-12-14 17:02:24 +01:00
48 changed files with 3812 additions and 491 deletions
@@ -3,6 +3,12 @@ set -e
SERVICE_NAME=$1
${bamboo_capability_system_builder_mvn3_Maven_3}/bin/mvn \
-f ${bamboo_build_working_directory}/$SERVICE_NAME-v1/pom.xml \
--no-transfer-progress \
clean install \
-Djava.security.egd=file:/dev/./urandomelse
echo "dependency-check:aggregate"
${bamboo_capability_system_builder_mvn3_Maven_3}/bin/mvn \
--no-transfer-progress \
+1
View File
@@ -6,6 +6,7 @@
<groupId>com.iqser.red</groupId>
<artifactId>platform-docker-dependency</artifactId>
<version>1.1.0</version>
<relativePath />
</parent>
<modelVersion>4.0.0</modelVersion>
+2 -1
View File
@@ -5,7 +5,8 @@
<parent>
<artifactId>platform-dependency</artifactId>
<groupId>com.iqser.red</groupId>
<version>1.1.7</version>
<version>1.5.0</version>
<relativePath />
</parent>
<modelVersion>4.0.0</modelVersion>
@@ -12,7 +12,7 @@
<artifactId>redaction-service-api-v1</artifactId>
<properties>
<persistence-service.version>0.135.0</persistence-service.version>
<persistence-service.version>0.151.0</persistence-service.version>
</properties>
<dependencies>
@@ -7,6 +7,7 @@ import lombok.Data;
import lombok.NonNull;
import lombok.RequiredArgsConstructor;
import java.util.ArrayList;
import java.util.List;
@Data
@@ -16,7 +17,7 @@ public class Page {
@NonNull
private List<AbstractTextContainer> textBlocks;
private List<PdfImage> images;
private List<PdfImage> images = new ArrayList<>();
private Rectangle bodyTextFrame;
@@ -1,15 +0,0 @@
package com.iqser.red.service.redaction.v1.server.client;
import org.springframework.cloud.openfeign.FeignClient;
import org.springframework.http.MediaType;
import org.springframework.web.bind.annotation.PostMapping;
import org.springframework.web.bind.annotation.RequestBody;
import org.springframework.web.multipart.MultipartFile;
@FeignClient(name = "ImageClassificationResource", url = "${image-service.url}")
public interface ImageClassificationClient {
@PostMapping(value = "/process_full_img", consumes = MediaType.MULTIPART_FORM_DATA_VALUE, produces = MediaType.APPLICATION_JSON_VALUE)
ImageClassificationResponse classify(@RequestBody MultipartFile file);
}
@@ -1,13 +0,0 @@
package com.iqser.red.service.redaction.v1.server.client;
import lombok.AllArgsConstructor;
import lombok.Data;
import lombok.NoArgsConstructor;
@Data
@NoArgsConstructor
@AllArgsConstructor
public class ImageClassificationResponse {
private String category;
}
@@ -88,7 +88,7 @@ public class RedactionController implements RedactionResource {
var storedObjectStream = redactionStorageService.getStoredObject(RedactionStorageService.StorageIdUtils.getStorageId(redactionRequest
.getDossierId(), redactionRequest.getFileId(), FileType.ORIGIN));
try {
Document classifiedDoc = pdfSegmentationService.parseDocument(storedObjectStream);
Document classifiedDoc = pdfSegmentationService.parseDocument(storedObjectStream, null);
storedObjectStream = redactionStorageService.getStoredObject(RedactionStorageService.StorageIdUtils.getStorageId(redactionRequest
.getDossierId(), redactionRequest.getFileId(), FileType.ORIGIN));
@@ -116,7 +116,7 @@ public class RedactionController implements RedactionResource {
var storedObjectStream = redactionStorageService.getStoredObject(RedactionStorageService.StorageIdUtils.getStorageId(redactionRequest
.getDossierId(), redactionRequest.getFileId(), FileType.ORIGIN));
try {
Document classifiedDoc = pdfSegmentationService.parseDocument(storedObjectStream);
Document classifiedDoc = pdfSegmentationService.parseDocument(storedObjectStream, null);
storedObjectStream = redactionStorageService.getStoredObject(RedactionStorageService.StorageIdUtils.getStorageId(redactionRequest
.getDossierId(), redactionRequest.getFileId(), FileType.ORIGIN));
@@ -145,7 +145,7 @@ public class RedactionController implements RedactionResource {
try {
var storedObjectStream = redactionStorageService.getStoredObject(RedactionStorageService.StorageIdUtils.getStorageId(redactionRequest
.getDossierId(), redactionRequest.getFileId(), FileType.ORIGIN));
classifiedDoc = pdfSegmentationService.parseDocument(storedObjectStream, true);
classifiedDoc = pdfSegmentationService.parseDocument(storedObjectStream, null);
} catch (Exception e) {
throw new RedactionException(e);
}
@@ -0,0 +1,377 @@
/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package com.iqser.red.service.redaction.v1.server.parsing;
import java.io.InputStream;
import java.io.IOException;
import java.util.Map;
import java.util.WeakHashMap;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.fontbox.ttf.TrueTypeFont;
import org.apache.fontbox.util.BoundingBox;
import org.apache.pdfbox.contentstream.PDFStreamEngine;
import org.apache.pdfbox.pdmodel.PDPage;
import org.apache.pdfbox.pdmodel.font.encoding.GlyphList;
import org.apache.pdfbox.pdmodel.common.PDRectangle;
import org.apache.pdfbox.pdmodel.font.PDCIDFont;
import org.apache.pdfbox.pdmodel.font.PDCIDFontType2;
import org.apache.pdfbox.pdmodel.font.PDFont;
import org.apache.pdfbox.pdmodel.font.PDSimpleFont;
import org.apache.pdfbox.pdmodel.font.PDTrueTypeFont;
import org.apache.pdfbox.pdmodel.font.PDType0Font;
import org.apache.pdfbox.pdmodel.font.PDType3Font;
import org.apache.pdfbox.pdmodel.graphics.state.PDGraphicsState;
import org.apache.pdfbox.text.TextPosition;
import org.apache.pdfbox.util.Matrix;
import org.apache.pdfbox.util.Vector;
import org.apache.pdfbox.contentstream.operator.DrawObject;
import org.apache.pdfbox.contentstream.operator.state.Concatenate;
import org.apache.pdfbox.contentstream.operator.state.Restore;
import org.apache.pdfbox.contentstream.operator.state.Save;
import org.apache.pdfbox.contentstream.operator.state.SetGraphicsStateParameters;
import org.apache.pdfbox.contentstream.operator.state.SetMatrix;
import org.apache.pdfbox.contentstream.operator.text.BeginText;
import org.apache.pdfbox.contentstream.operator.text.EndText;
import org.apache.pdfbox.contentstream.operator.text.SetFontAndSize;
import org.apache.pdfbox.contentstream.operator.text.SetTextHorizontalScaling;
import org.apache.pdfbox.contentstream.operator.text.ShowTextAdjusted;
import org.apache.pdfbox.contentstream.operator.text.ShowTextLine;
import org.apache.pdfbox.contentstream.operator.text.ShowTextLineAndSpace;
import org.apache.pdfbox.contentstream.operator.text.MoveText;
import org.apache.pdfbox.contentstream.operator.text.MoveTextSetLeading;
import org.apache.pdfbox.contentstream.operator.text.NextLine;
import org.apache.pdfbox.contentstream.operator.text.SetCharSpacing;
import org.apache.pdfbox.contentstream.operator.text.SetTextLeading;
import org.apache.pdfbox.contentstream.operator.text.SetTextRenderingMode;
import org.apache.pdfbox.contentstream.operator.text.SetTextRise;
import org.apache.pdfbox.contentstream.operator.text.SetWordSpacing;
import org.apache.pdfbox.contentstream.operator.text.ShowText;
import org.apache.pdfbox.cos.COSDictionary;
import org.apache.pdfbox.pdmodel.font.PDFontDescriptor;
/**
* LEGACY text calculations which are known to be incorrect but are depended on by PDFTextStripper.
*
* This class exists only so that we don't break the code of users who have their own subclasses of
* PDFTextStripper. It replaces the mostly empty implementation of showGlyph() in PDFStreamEngine
* with a heuristic implementation which is backwards compatible.
*
* DO NOT USE THIS CODE UNLESS YOU ARE WORKING WITH PDFTextStripper.
* THIS CODE IS DELIBERATELY INCORRECT, USE PDFStreamEngine INSTEAD.
*/
@SuppressWarnings({"PMD", "checkstyle:all"})
class LegacyPDFStreamEngine extends PDFStreamEngine
{
private static final Log LOG = LogFactory.getLog(LegacyPDFStreamEngine.class);
private int pageRotation;
private PDRectangle pageSize;
private Matrix translateMatrix;
private final GlyphList glyphList;
private final Map<COSDictionary, Float> fontHeightMap = new WeakHashMap<COSDictionary, Float>();
/**
* Constructor.
*/
LegacyPDFStreamEngine() throws IOException
{
addOperator(new BeginText());
addOperator(new Concatenate());
addOperator(new DrawObject()); // special text version
addOperator(new EndText());
addOperator(new SetGraphicsStateParameters());
addOperator(new Save());
addOperator(new Restore());
addOperator(new NextLine());
addOperator(new SetCharSpacing());
addOperator(new MoveText());
addOperator(new MoveTextSetLeading());
addOperator(new SetFontAndSize());
addOperator(new ShowText());
addOperator(new ShowTextAdjusted());
addOperator(new SetTextLeading());
addOperator(new SetMatrix());
addOperator(new SetTextRenderingMode());
addOperator(new SetTextRise());
addOperator(new SetWordSpacing());
addOperator(new SetTextHorizontalScaling());
addOperator(new ShowTextLine());
addOperator(new ShowTextLineAndSpace());
// load additional glyph list for Unicode mapping
String path = "/org/apache/pdfbox/resources/glyphlist/additional.txt";
InputStream input = GlyphList.class.getResourceAsStream(path);
glyphList = new GlyphList(GlyphList.getAdobeGlyphList(), input);
}
/**
* This will initialize and process the contents of the stream.
*
* @param page the page to process
* @throws java.io.IOException if there is an error accessing the stream.
*/
@Override
public void processPage(PDPage page) throws IOException
{
this.pageRotation = page.getRotation();
this.pageSize = page.getCropBox();
if (pageSize.getLowerLeftX() == 0 && pageSize.getLowerLeftY() == 0)
{
translateMatrix = null;
}
else
{
// translation matrix for cropbox
translateMatrix = Matrix.getTranslateInstance(-pageSize.getLowerLeftX(), -pageSize.getLowerLeftY());
}
super.processPage(page);
}
/**
* Called when a glyph is to be processed. The heuristic calculations here were originally
* written by Ben Litchfield for PDFStreamEngine.
*/
@Override
protected void showGlyph(Matrix textRenderingMatrix, PDFont font, int code,
String unicode,
Vector displacement)
throws IOException
{
//
// legacy calculations which were previously in PDFStreamEngine
//
// DO NOT USE THIS CODE UNLESS YOU ARE WORKING WITH PDFTextStripper.
// THIS CODE IS DELIBERATELY INCORRECT
//
PDGraphicsState state = getGraphicsState();
Matrix ctm = state.getCurrentTransformationMatrix();
float fontSize = state.getTextState().getFontSize();
float horizontalScaling = state.getTextState().getHorizontalScaling() / 100f;
Matrix textMatrix = getTextMatrix();
float displacementX = displacement.getX();
// the sorting algorithm is based on the width of the character. As the displacement
// for vertical characters doesn't provide any suitable value for it, we have to
// calculate our own
if (font.isVertical())
{
displacementX = font.getWidth(code) / 1000;
// there may be an additional scaling factor for true type fonts
TrueTypeFont ttf = null;
if (font instanceof PDTrueTypeFont)
{
ttf = ((PDTrueTypeFont)font).getTrueTypeFont();
}
else if (font instanceof PDType0Font)
{
PDCIDFont cidFont = ((PDType0Font)font).getDescendantFont();
if (cidFont instanceof PDCIDFontType2)
{
ttf = ((PDCIDFontType2)cidFont).getTrueTypeFont();
}
}
if (ttf != null && ttf.getUnitsPerEm() != 1000)
{
displacementX *= 1000f / ttf.getUnitsPerEm();
}
}
//
// legacy calculations which were previously in PDFStreamEngine
//
// DO NOT USE THIS CODE UNLESS YOU ARE WORKING WITH PDFTextStripper.
// THIS CODE IS DELIBERATELY INCORRECT
//
// (modified) combined displacement, this is calculated *without* taking the character
// spacing and word spacing into account, due to legacy code in TextStripper
float tx = displacementX * fontSize * horizontalScaling;
float ty = displacement.getY() * fontSize;
// (modified) combined displacement matrix
Matrix td = Matrix.getTranslateInstance(tx, ty);
// (modified) text rendering matrix
Matrix nextTextRenderingMatrix = td.multiply(textMatrix).multiply(ctm); // text space -> device space
float nextX = nextTextRenderingMatrix.getTranslateX();
float nextY = nextTextRenderingMatrix.getTranslateY();
// (modified) width and height calculations
float dxDisplay = nextX - textRenderingMatrix.getTranslateX();
Float fontHeight = fontHeightMap.get(font.getCOSObject());
if (fontHeight == null)
{
fontHeight = computeFontHeight(font);
fontHeightMap.put(font.getCOSObject(), fontHeight);
}
float dyDisplay = fontHeight * textRenderingMatrix.getScalingFactorY();
//
// start of the original method
//
// Note on variable names. There are three different units being used in this code.
// Character sizes are given in glyph units, text locations are initially given in text
// units, and we want to save the data in display units. The variable names should end with
// Text or Disp to represent if the values are in text or disp units (no glyph units are
// saved).
float glyphSpaceToTextSpaceFactor = 1 / 1000f;
if (font instanceof PDType3Font)
{
glyphSpaceToTextSpaceFactor = font.getFontMatrix().getScaleX();
}
float spaceWidthText = 0;
try
{
// to avoid crash as described in PDFBOX-614, see what the space displacement should be
spaceWidthText = font.getSpaceWidth() * glyphSpaceToTextSpaceFactor;
}
catch (Throwable exception)
{
LOG.warn(exception, exception);
}
if (spaceWidthText == 0)
{
spaceWidthText = font.getAverageFontWidth() * glyphSpaceToTextSpaceFactor;
// the average space width appears to be higher than necessary so make it smaller
spaceWidthText *= .80f;
}
if (spaceWidthText == 0)
{
spaceWidthText = 1.0f; // if could not find font, use a generic value
}
// the space width has to be transformed into display units
float spaceWidthDisplay = spaceWidthText * textRenderingMatrix.getScalingFactorX();
// use our additional glyph list for Unicode mapping
String unicodeMapping = font.toUnicode(code, glyphList);
// when there is no Unicode mapping available, Acrobat simply coerces the character code
// into Unicode, so we do the same. Subclasses of PDFStreamEngine don't necessarily want
// this, which is why we leave it until this point in PDFTextStreamEngine.
if (unicodeMapping == null)
{
if (font instanceof PDSimpleFont)
{
char c = (char) code;
unicodeMapping = new String(new char[] { c });
}
else
{
// Acrobat doesn't seem to coerce composite font's character codes, instead it
// skips them. See the "allah2.pdf" TestTextStripper file.
return;
}
}
// adjust for cropbox if needed
Matrix translatedTextRenderingMatrix;
if (translateMatrix == null)
{
translatedTextRenderingMatrix = textRenderingMatrix;
}
else
{
translatedTextRenderingMatrix = Matrix.concatenate(translateMatrix, textRenderingMatrix);
nextX -= pageSize.getLowerLeftX();
nextY -= pageSize.getLowerLeftY();
}
processTextPosition(new TextPosition(pageRotation, pageSize.getWidth(),
pageSize.getHeight(), translatedTextRenderingMatrix, nextX, nextY,
Math.abs(dyDisplay), dxDisplay,
Math.abs(spaceWidthDisplay), unicodeMapping, new int[] { code }, font,
fontSize,
(int)(fontSize * textMatrix.getScalingFactorX())));
}
/**
* Compute the font height. Override this if you want to use own calculations.
*
* @param font the font.
* @return the font height.
*
* @throws IOException if there is an error while getting the font bounding box.
*/
protected float computeFontHeight(PDFont font) throws IOException
{
BoundingBox bbox = font.getBoundingBox();
if (bbox.getLowerLeftY() < Short.MIN_VALUE)
{
// PDFBOX-2158 and PDFBOX-3130
// files by Salmat eSolutions / ClibPDF Library
bbox.setLowerLeftY(- (bbox.getLowerLeftY() + 65536));
}
// 1/2 the bbox is used as the height todo: why?
float glyphHeight = bbox.getHeight() / 2;
// sometimes the bbox has very high values, but CapHeight is OK
PDFontDescriptor fontDescriptor = font.getFontDescriptor();
if (fontDescriptor != null)
{
float capHeight = fontDescriptor.getCapHeight();
if (Float.compare(capHeight, 0) != 0 &&
(capHeight < glyphHeight || Float.compare(glyphHeight, 0) == 0))
{
glyphHeight = capHeight;
}
// PDFBOX-3464, PDFBOX-4480, PDFBOX-4553:
// sometimes even CapHeight has very high value, but Ascent and Descent are ok
float ascent = fontDescriptor.getAscent();
float descent = fontDescriptor.getDescent();
if (capHeight > ascent && ascent > 0 && descent < 0 &&
((ascent - descent) / 2 < glyphHeight || Float.compare(glyphHeight, 0) == 0))
{
glyphHeight = (ascent - descent) / 2;
}
}
// transformPoint from glyph space -> text space
float height;
if (font instanceof PDType3Font)
{
height = font.getFontMatrix().transformPoint(0, glyphHeight).y;
}
else
{
height = glyphHeight / 1000;
}
return height;
}
/**
* A method provided as an event interface to allow a subclass to perform some specific
* functionality when text needs to be processed.
*
* @param text The text to be processed.
*/
protected void processTextPosition(TextPosition text)
{
// subclasses can override to provide specific functionality
}
}
@@ -36,7 +36,6 @@ import org.apache.pdfbox.pdmodel.PDDocument;
import org.apache.pdfbox.pdmodel.PDPage;
import org.apache.pdfbox.pdmodel.graphics.PDXObject;
import org.apache.pdfbox.pdmodel.graphics.image.PDImageXObject;
import org.apache.pdfbox.text.PDFTextStripper;
import org.apache.pdfbox.text.TextPosition;
import org.apache.pdfbox.util.Matrix;
@@ -125,11 +124,9 @@ public class PDFLinesTextStripper extends PDFTextStripper {
// The direction of vertical lines must always be from bottom to top for the table extraction algorithm.
if (pos.getY() > path_y) {
graphicsPath.add(new Ruling(new Point2D.Float(path_x, path_y), new Point2D.Float((float) pos.getX(), (float) pos
.getY())));
graphicsPath.add(new Ruling(new Point2D.Float(path_x, path_y), new Point2D.Float((float) pos.getX(), (float) pos.getY())));
} else {
graphicsPath.add(new Ruling(new Point2D.Float(path_x, (float) pos.getY()), new Point2D.Float((float) pos
.getX(), path_y)));
graphicsPath.add(new Ruling(new Point2D.Float(path_x, (float) pos.getY()), new Point2D.Float((float) pos.getX(), path_y)));
}
path_x = (float) pos.getX();
@@ -150,25 +147,19 @@ public class PDFLinesTextStripper extends PDFTextStripper {
Point2D p2 = transformPosition(x + width, y + height);
// Horizontal lines
graphicsPath.add(new Ruling(new Point2D.Float((float) p1.getX(), (float) p1.getY()), new Point2D.Float((float) p2
.getX(), (float) p1.getY())));
graphicsPath.add(new Ruling(new Point2D.Float((float) p1.getX(), (float) p2.getY()), new Point2D.Float((float) p2
.getX(), (float) p2.getY())));
graphicsPath.add(new Ruling(new Point2D.Float((float) p1.getX(), (float) p1.getY()), new Point2D.Float((float) p2.getX(), (float) p1.getY())));
graphicsPath.add(new Ruling(new Point2D.Float((float) p1.getX(), (float) p2.getY()), new Point2D.Float((float) p2.getX(), (float) p2.getY())));
// Vertical lines, direction must always be from bottom to top for the table extraction algorithm.
if (p2.getY() > p1.getY()) {
graphicsPath.add(new Ruling(new Point2D.Float((float) p2.getX(), (float) p1.getY()), new Point2D.Float((float) p2
.getX(), (float) p2.getY())));
graphicsPath.add(new Ruling(new Point2D.Float((float) p2.getX(), (float) p1.getY()), new Point2D.Float((float) p2.getX(), (float) p2.getY())));
} else {
graphicsPath.add(new Ruling(new Point2D.Float((float) p2.getX(), (float) p2.getY()), new Point2D.Float((float) p2
.getX(), (float) p1.getY())));
graphicsPath.add(new Ruling(new Point2D.Float((float) p2.getX(), (float) p2.getY()), new Point2D.Float((float) p2.getX(), (float) p1.getY())));
}
if (p2.getY() > p1.getY()) {
graphicsPath.add(new Ruling(new Point2D.Float((float) p1.getX(), (float) p1.getY()), new Point2D.Float((float) p1
.getX(), (float) p2.getY())));
graphicsPath.add(new Ruling(new Point2D.Float((float) p1.getX(), (float) p1.getY()), new Point2D.Float((float) p1.getX(), (float) p2.getY())));
} else {
graphicsPath.add(new Ruling(new Point2D.Float((float) p1.getX(), (float) p2.getY()), new Point2D.Float((float) p1
.getX(), (float) p1.getY())));
graphicsPath.add(new Ruling(new Point2D.Float((float) p1.getX(), (float) p2.getY()), new Point2D.Float((float) p1.getX(), (float) p1.getY())));
}
}
break;
@@ -192,9 +183,9 @@ public class PDFLinesTextStripper extends PDFTextStripper {
graphicsPath.clear();
break;
case OperatorName.DRAW_OBJECT:
processImageOperation(arguments);
break;
// case OperatorName.DRAW_OBJECT:
// processImageOperation(arguments);
// break;
}
@@ -211,8 +202,7 @@ public class PDFLinesTextStripper extends PDFTextStripper {
PDImageXObject image = (PDImageXObject) xobject;
Matrix ctmNew = getGraphicsState().getCurrentTransformationMatrix();
Rectangle2D rect = new Rectangle2D.Float(ctmNew.getTranslateX(), ctmNew.getTranslateY(), ctmNew.getScaleX(), ctmNew
.getScaleY());
Rectangle2D rect = new Rectangle2D.Float(ctmNew.getTranslateX(), ctmNew.getTranslateY(), ctmNew.getScaleX(), ctmNew.getScaleY());
// Memory Hack - sofReference kills me
FieldUtils.writeField(image, "cachedImageSubsampling", -1, true);
@@ -295,9 +285,7 @@ public class PDFLinesTextStripper extends PDFTextStripper {
if (i == 0 && (textPositions.get(i).getUnicode().equals(" ") || textPositions.get(i)
.getUnicode()
.equals("\u00A0") || textPositions.get(i)
.getUnicode()
.equals("\t"))) {
.equals("\u00A0") || textPositions.get(i).getUnicode().equals("\t"))) {
startIndex++;
continue;
}
@@ -307,7 +295,9 @@ public class PDFLinesTextStripper extends PDFTextStripper {
List<TextPosition> sublist = textPositions.subList(startIndex, i);
if (!(sublist.isEmpty() || sublist.size() == 1 && (sublist.get(0)
.getUnicode()
.equals(" ") || sublist.get(0).getUnicode().equals("\u00A0") || sublist.get(0).getUnicode().equals("\t")))) {
.equals(" ") || sublist.get(0).getUnicode().equals("\u00A0") || sublist.get(0)
.getUnicode()
.equals("\t")))) {
textPositionSequences.add(new TextPositionSequence(sublist, pageNumber));
}
startIndex = i;
@@ -318,7 +308,9 @@ public class PDFLinesTextStripper extends PDFTextStripper {
List<TextPosition> sublist = textPositions.subList(startIndex, i);
if (!(sublist.isEmpty() || sublist.size() == 1 && (sublist.get(0)
.getUnicode()
.equals(" ") || sublist.get(0).getUnicode().equals("\u00A0") || sublist.get(0).getUnicode().equals("\t")))) {
.equals(" ") || sublist.get(0).getUnicode().equals("\u00A0") || sublist.get(0)
.getUnicode()
.equals("\t")))) {
textPositionSequences.add(new TextPositionSequence(sublist, pageNumber));
}
startIndex = i;
@@ -332,7 +324,9 @@ public class PDFLinesTextStripper extends PDFTextStripper {
List<TextPosition> sublist = textPositions.subList(startIndex, i);
if (!(sublist.isEmpty() || sublist.size() == 1 && (sublist.get(0)
.getUnicode()
.equals(" ") || sublist.get(0).getUnicode().equals("\u00A0") || sublist.get(0).getUnicode().equals("\t")))) {
.equals(" ") || sublist.get(0).getUnicode().equals("\u00A0") || sublist.get(0)
.getUnicode()
.equals("\t")))) {
// Remove false sequence ends (whitespaces)
if (previous != null && sublist.get(0).getYDirAdj() == previous.getYDirAdj() && sublist.get(0)
@@ -351,15 +345,15 @@ public class PDFLinesTextStripper extends PDFTextStripper {
List<TextPosition> sublist = textPositions.subList(startIndex, textPositions.size());
if (!sublist.isEmpty() && (sublist.get(sublist.size() - 1)
.getUnicode()
.equals(" ") || sublist.get(sublist.size() - 1).getUnicode().equals("\u00A0") || sublist.get(sublist.size() - 1).getUnicode().equals("\t"))) {
.equals(" ") || sublist.get(sublist.size() - 1)
.getUnicode()
.equals("\u00A0") || sublist.get(sublist.size() - 1).getUnicode().equals("\t"))) {
sublist = sublist.subList(0, sublist.size() - 1);
}
if (!(sublist.isEmpty() || sublist.size() == 1 && (sublist.get(0).getUnicode().equals(" ") || sublist.get(0)
.getUnicode()
.equals("\u00A0") || sublist.get(0)
.getUnicode()
.equals("\t")))) {
.equals("\u00A0") || sublist.get(0).getUnicode().equals("\t")))) {
if (previous != null && sublist.get(0).getYDirAdj() == previous.getYDirAdj() && sublist.get(0)
.getXDirAdj() - (previous.getXDirAdj() + previous.getWidthDirAdj()) < 0.01) {
for (TextPosition t : sublist) {
@@ -1,22 +1,24 @@
package com.iqser.red.service.redaction.v1.server.parsing.model;
import static java.util.stream.Collectors.toSet;
import com.fasterxml.jackson.annotation.JsonIgnore;
import com.fasterxml.jackson.annotation.JsonIgnoreProperties;
import com.iqser.red.service.redaction.v1.model.Point;
import com.iqser.red.service.redaction.v1.model.Rectangle;
import lombok.Data;
import lombok.NoArgsConstructor;
import org.apache.pdfbox.text.TextPosition;
import java.util.ArrayList;
import java.util.List;
import java.util.stream.Collectors;
import org.apache.pdfbox.text.TextPosition;
import com.fasterxml.jackson.annotation.JsonIgnore;
import com.fasterxml.jackson.annotation.JsonIgnoreProperties;
import com.iqser.red.service.redaction.v1.model.Point;
import com.iqser.red.service.redaction.v1.model.Rectangle;
import lombok.Data;
import lombok.NoArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Data
@NoArgsConstructor
@JsonIgnoreProperties({ "empty" })
@JsonIgnoreProperties({"empty"})
public class TextPositionSequence implements CharSequence {
private int page;
@@ -25,12 +27,15 @@ public class TextPositionSequence implements CharSequence {
private float x1;
private float x2;
public TextPositionSequence(int page) {
this.page = page;
}
public static TextPositionSequence fromData(List<RedTextPosition> textPositions, int page) {
var textPositionSequence = new TextPositionSequence();
textPositionSequence.textPositions = textPositions;
textPositionSequence.page = page;
@@ -46,9 +51,6 @@ public class TextPositionSequence implements CharSequence {
}
@Override
public int length() {
@@ -131,6 +133,7 @@ public class TextPositionSequence implements CharSequence {
}
}
@JsonIgnore
public float getRotationAdjustedY() {
@@ -190,10 +193,8 @@ public class TextPositionSequence implements CharSequence {
@JsonIgnore
public String getFont() {
return textPositions.get(0).getFontName()
.toLowerCase()
.replaceAll(",bold", "")
.replaceAll(",italic", "");
return textPositions.get(0).getFontName().toLowerCase().replaceAll(",bold", "").replaceAll(",italic", "");
}
@@ -214,27 +215,33 @@ public class TextPositionSequence implements CharSequence {
}
@JsonIgnore
public float getFontSize() {
return textPositions.get(0).getFontSizeInPt();
}
@JsonIgnore
public float getSpaceWidth() {
return textPositions.get(0).getWidthOfSpace();
}
@JsonIgnore
public int getRotation() {
return textPositions.get(0).getRotation();
}
@JsonIgnore
public Rectangle getRectangle() {
log.debug("Page: '{}', Word: '{}', Rotation: '{}'", page, toString(), textPositions.get(0).getRotation());
float height = getTextHeight();
float posXInit = getX1();
@@ -246,36 +253,45 @@ public class TextPositionSequence implements CharSequence {
posXEnd = textPositions.get(0).getYDirAdj() + 2;
posYInit = getY1();
posYEnd = textPositions.get(textPositions.size() - 1).getXDirAdj() - height + 4;
} else if (textPositions.get(0).getRotation() == 270) {
} else if (textPositions.get(0).getRotation() == 270 && textPositions.get(0).getDir() == 270.0f) {
posYInit = textPositions.get(0).getPageHeight() - getX1();
posYEnd = textPositions.get(0).getPageHeight() - getX2() - textPositions.get(0)
.getWidth() - textPositions.get(textPositions.size() - 1).getWidth() - 1;
posXInit = textPositions.get(0).getPageWidth() - textPositions.get(0).getYDirAdj() - 2;
posXEnd = textPositions.get(0).getPageWidth() - textPositions.get(textPositions.size() - 1)
.getYDirAdj() + height;
} else if(textPositions.get(0).getRotation() == 0 && textPositions.get(0).getDir() == 270f) {
} else if (textPositions.get(0).getRotation() == 270 && textPositions.get(0).getDir() == 0.0f) {
posYInit = textPositions.get(0).getPageHeight() - textPositions.get(0).getYDirAdj() - 2;
posYEnd = posYInit + 1;
posXInit = textPositions.get(0).getXDirAdj();
posXEnd = textPositions.get(textPositions.size() - 1).getXDirAdj() + textPositions.get(textPositions.size() - 1).getWidthDirAdj() + 0.1f;
} else if (textPositions.get(0).getRotation() == 0 && textPositions.get(0).getDir() == 270f) {
posYInit = textPositions.get(0).getPageHeight() - getX1();
posYEnd = textPositions.get(0).getPageHeight() - getX2() - textPositions.get(0)
.getWidthDirAdj() - textPositions.get(textPositions.size() - 1).getWidthDirAdj() - 3;
posXInit = textPositions.get(0).getPageWidth() - textPositions.get(0).getYDirAdj() - 2;
posXEnd = textPositions.get(0).getPageWidth() - textPositions.get(textPositions.size() - 1)
.getYDirAdj() + height;
} else if(textPositions.get(0).getRotation() == 90 && textPositions.get(0).getDir() == 0.0f){
posXInit = textPositions.get(textPositions.size() - 1)
} else if (textPositions.get(0).getRotation() == 90 && textPositions.get(0).getDir() == 0.0f) {
posXInit = textPositions.get(textPositions.size() - 1)
.getXDirAdj() + textPositions.get(textPositions.size() - 1).getHeightDir();
posXEnd = textPositions.get(0).getXDirAdj();
posYInit = textPositions.get(0).getPageHeight() - textPositions.get(0).getYDirAdj() - 2;
posYEnd = textPositions.get(0).getPageHeight() - textPositions.get(textPositions.size() - 1)
.getYDirAdj() + 2;
} else if(textPositions.get(0).getRotation() == 0 && textPositions.get(0).getDir() == 90f){
posYInit = getX1();
posYEnd = getX2() + textPositions.get(0)
.getWidthDirAdj() - textPositions.get(textPositions.size() - 1).getWidthDirAdj() - 3;
posXInit = textPositions.get(0).getYDirAdj() + 2;
posXEnd = textPositions.get(textPositions.size() - 1)
.getYDirAdj() - height;
}
else {
} else if (textPositions.get(0).getRotation() == 0 && textPositions.get(0).getDir() == 90f) {
posYInit = getX1();
posYEnd = getX2() + textPositions.get(0).getWidthDirAdj() - textPositions.get(textPositions.size() - 1)
.getWidthDirAdj() - 3;
posXInit = textPositions.get(0).getYDirAdj() + 2;
posXEnd = textPositions.get(textPositions.size() - 1).getYDirAdj() - height;
} else {
posXEnd = textPositions.get(textPositions.size() - 1)
.getXDirAdj() + textPositions.get(textPositions.size() - 1).getWidthDirAdj() + 1;
posYInit = textPositions.get(0).getPageHeight() - textPositions.get(0).getYDirAdj() - 2;
@@ -283,7 +299,9 @@ public class TextPositionSequence implements CharSequence {
.getYDirAdj() + 2;
}
return new Rectangle(new Point(posXInit, posYInit), posXEnd - posXInit, posYEnd - posYInit + height, page);
var rectangle = new Rectangle(new Point(posXInit, posYInit), posXEnd - posXInit, posYEnd - posYInit + height, page);
log.debug("Rectangle: {}", rectangle);
return rectangle;
}
}
@@ -42,6 +42,8 @@ public class Entity implements ReasonHolder {
private boolean isDossierDictionaryEntry;
private boolean ignored;
private Set<Engine> engines = new HashSet<>();
private Set<Entity> references = new HashSet<>();
@@ -20,6 +20,7 @@ public class Image implements ReasonHolder {
private int sectionNumber;
private String section;
private int page;
private boolean ignored;
private boolean hasTransparency;
}
@@ -16,6 +16,7 @@ public class PdfImage {
private BufferedImage image;
@NonNull
private RedRectangle2D position;
@NonNull
private ImageType imageType;
private boolean isAppendedToParagraph;
private boolean hasTransparency;
@@ -156,14 +156,14 @@ public class Section {
@WhenCondition
public boolean matchesType(@Argument(ArgumentType.TYPE) String type) {
return entities.stream().anyMatch(entity -> entity.getType().equals(type));
return entities.stream().anyMatch(entity -> !entity.isIgnored() && entity.getType().equals(type));
}
@WhenCondition
public boolean matchesImageType(@Argument(ArgumentType.TYPE) String type) {
return images.stream().anyMatch(image -> image.getType().equals(type));
return images.stream().anyMatch(image -> !image.isIgnored() && image.getType().equals(type));
}
@@ -0,0 +1,14 @@
package com.iqser.red.service.redaction.v1.server.redaction.model.image;
import java.util.HashMap;
import java.util.Map;
import lombok.Data;
@Data
public class Classification {
private Map<String, Float> probabilities = new HashMap<>();
private String label;
}
@@ -0,0 +1,10 @@
package com.iqser.red.service.redaction.v1.server.redaction.model.image;
import lombok.Data;
@Data
public class FilterGeometry {
private ImageSize imageSize;
private ImageFormat imageFormat;
}
@@ -0,0 +1,11 @@
package com.iqser.red.service.redaction.v1.server.redaction.model.image;
import lombok.Data;
@Data
public class Filters {
private FilterGeometry geometry;
private Probability probability;
private boolean allPassed;
}
@@ -0,0 +1,9 @@
package com.iqser.red.service.redaction.v1.server.redaction.model.image;
import lombok.Data;
@Data
public class Geometry {
private float width;
private float height;
}
@@ -0,0 +1,12 @@
package com.iqser.red.service.redaction.v1.server.redaction.model.image;
import lombok.Data;
@Data
public class ImageFormat {
private float quotient;
private boolean tooTall;
private boolean tooWide;
}
@@ -0,0 +1,12 @@
package com.iqser.red.service.redaction.v1.server.redaction.model.image;
import lombok.Data;
@Data
public class ImageMetadata {
private Classification classification;
private Position position;
private Geometry geometry;
private Filters filters;
}
@@ -0,0 +1,15 @@
package com.iqser.red.service.redaction.v1.server.redaction.model.image;
import java.util.ArrayList;
import java.util.List;
import lombok.Data;
@Data
public class ImageServiceResponse {
private String dossierId;
private String fileId;
private List<ImageMetadata> imageMetadata = new ArrayList<>();
}
@@ -0,0 +1,12 @@
package com.iqser.red.service.redaction.v1.server.redaction.model.image;
import lombok.Data;
@Data
public class ImageSize {
private float quotient;
private boolean tooLarge;
private boolean tooSmall;
}
@@ -0,0 +1,12 @@
package com.iqser.red.service.redaction.v1.server.redaction.model.image;
import lombok.Data;
@Data
public class Position {
private float x1;
private float x2;
private float y1;
private float y2;
private int pageNumber;
}
@@ -0,0 +1,10 @@
package com.iqser.red.service.redaction.v1.server.redaction.model.image;
import lombok.Data;
@Data
public class Probability {
private boolean unconfident;
}
@@ -26,8 +26,10 @@ import com.iqser.red.service.redaction.v1.server.redaction.model.DictionaryIncre
import com.iqser.red.service.redaction.v1.server.redaction.model.DictionaryVersion;
import com.iqser.red.service.redaction.v1.server.redaction.model.Image;
import com.iqser.red.service.redaction.v1.server.redaction.model.PageEntities;
import com.iqser.red.service.redaction.v1.server.redaction.model.PdfImage;
import com.iqser.red.service.redaction.v1.server.redaction.model.RedRectangle2D;
import com.iqser.red.service.redaction.v1.server.redaction.utils.EntitySearchUtils;
import com.iqser.red.service.redaction.v1.server.segmentation.ImageService;
import com.iqser.red.service.redaction.v1.server.segmentation.PdfSegmentationService;
import com.iqser.red.service.redaction.v1.server.settings.RedactionServiceSettings;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
@@ -53,6 +55,7 @@ public class AnalyzeService {
private final SectionTextBuilderService sectionTextBuilderService;
private final SectionGridCreatorService sectionGridCreatorService;
private final NerAnalyserService nerAnalyserService;
private final ImageService imageService;
public void analyzeDocumentStructure(StructureAnalyzeRequest analyzeRequest) {
@@ -63,9 +66,15 @@ public class AnalyzeService {
Document classifiedDoc;
try {
var storedObjectStream = redactionStorageService.getStoredObject(RedactionStorageService.StorageIdUtils.getStorageId(analyzeRequest
.getDossierId(), analyzeRequest.getFileId(), FileType.ORIGIN));
classifiedDoc = pdfSegmentationService.parseDocument(storedObjectStream);
Map<Integer, List<PdfImage>> pdfImages = null;
if(redactionServiceSettings.isEnableImageClassification()) {
pdfImages = imageService.convertImages(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
}
classifiedDoc = pdfSegmentationService.parseDocument(storedObjectStream, pdfImages);
pageCount = classifiedDoc.getPages().size();
} catch (Exception e) {
throw new RedactionException(e);
@@ -122,7 +122,7 @@ public class DictionaryService {
dictionary.getDictionaryModels().forEach(dm -> {
if (dm.isRecommendation() && !dm.getLocalEntries().isEmpty()) {
dictionaryClient.addEntries(IdBuilder.getTypeId(dm.getType(), dossierTemplateId, dm.isDossierDictionary() ? dossierId : null), new ArrayList<>(dm.getLocalEntries()), false);
dictionaryClient.addEntries(IdBuilder.getTypeId(dm.getType(), dossierTemplateId, dm.isDossierDictionary() ? dossierId : null), new ArrayList<>(dm.getLocalEntries()), false, true);
long externalVersion = dictionaryClient.getVersion(dossierTemplateId);
if (externalVersion == dictionary.getVersion().getDossierTemplateVersion() + 1) {
dictionary.getVersion().setDossierTemplateVersion(externalVersion);
@@ -10,7 +10,9 @@ import java.util.stream.Collectors;
import java.util.stream.Stream;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.AnnotationStatus;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.IdRemoval;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.ManualImageRecategorization;
import org.apache.commons.codec.binary.Base64;
import org.apache.commons.lang3.StringUtils;
import org.kie.api.runtime.KieContainer;
@@ -82,19 +84,42 @@ public class EntityRedactionService {
surroundingWordsService.addSurroundingText(entities, reanalysisSection.getSearchableText(), dictionary);
}
if (!local && reanalysisSection.getImages() != null && !reanalysisSection.getImages()
.isEmpty() && analyzeRequest.getManualRedactions() != null && analyzeRequest.getManualRedactions()
.getImageRecategorization() != null) {
for (Image image : reanalysisSection.getImages()) {
String imageId = IdBuilder.buildId(image.getPosition(), image.getPage());
for (ManualImageRecategorization imageRecategorization : analyzeRequest.getManualRedactions()
.getImageRecategorization()) {
if (imageRecategorization.getStatus().equals(AnnotationStatus.APPROVED) && imageRecategorization.getAnnotationId()
.equals(imageId)) {
image.setType(imageRecategorization.getType());
if (!local && analyzeRequest.getManualRedactions() != null) {
var approvedForceRedactions = analyzeRequest.getManualRedactions().getForceRedactions().stream()
.filter(fr -> fr.getStatus() == AnnotationStatus.APPROVED)
.filter(fr -> fr.getRequestDate() != null)
.collect(Collectors.toList());
// only approved id removals, that haven't been forced back afterwards
var idsToRemove = analyzeRequest.getManualRedactions().getIdsToRemove().stream()
.filter(idr -> idr.getStatus() == AnnotationStatus.APPROVED)
.filter(idr -> idr.getRequestDate() != null)
.filter(idr -> approvedForceRedactions.stream().noneMatch(forceRedact -> forceRedact.getRequestDate().isAfter(idr.getRequestDate())))
.map(IdRemoval::getAnnotationId).collect(Collectors.toSet());
if (reanalysisSection.getImages() != null && !reanalysisSection.getImages()
.isEmpty() && analyzeRequest.getManualRedactions().getImageRecategorization() != null) {
for (Image image : reanalysisSection.getImages()) {
String imageId = IdBuilder.buildId(image.getPosition(), image.getPage());
for (ManualImageRecategorization imageRecategorization : analyzeRequest.getManualRedactions()
.getImageRecategorization()) {
if (imageRecategorization.getStatus()
.equals(AnnotationStatus.APPROVED) && imageRecategorization.getAnnotationId()
.equals(imageId)) {
image.setType(imageRecategorization.getType());
}
}
if (idsToRemove.contains(imageId)) {
image.setIgnored(true);
}
}
}
entities.forEach(entity -> entity.getPositionSequences().forEach(ps -> {
if (idsToRemove.contains(ps.getId())) {
entity.setIgnored(true);
}
}));
}
sectionSearchableTextPairs.add(new SectionSearchableTextPair(Section.builder()
@@ -149,7 +174,8 @@ public class EntityRedactionService {
.add(new Entity(entity.getWord(), entity.getType(), entity.isRedaction(), entity.getRedactionReason(), entry
.getValue(), entity.getHeadline(), entity.getMatchedRule(), entity.getSectionNumber(), entity
.getLegalBasis(), entity.isDictionaryEntry(), entity.getTextBefore(), entity.getTextAfter(), entity
.getStart(), entity.getEnd(), entity.isDossierDictionaryEntry(), entity.getEngines(), entity.getReferences()));
.getStart(), entity.getEnd(), entity.isDossierDictionaryEntry(), entity.getEngines(), entity
.getReferences()));
}
}
return entitiesPerPage;
@@ -1,71 +0,0 @@
package com.iqser.red.service.redaction.v1.server.redaction.service;
import com.iqser.red.service.redaction.v1.server.classification.model.Page;
import com.iqser.red.service.redaction.v1.server.client.ImageClassificationClient;
import com.iqser.red.service.redaction.v1.server.client.ImageClassificationResponse;
import com.iqser.red.service.redaction.v1.server.client.MockMultipartFile;
import com.iqser.red.service.redaction.v1.server.redaction.model.ImageType;
import com.iqser.red.service.redaction.v1.server.redaction.model.PdfImage;
import com.iqser.red.service.redaction.v1.server.settings.RedactionServiceSettings;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
import org.springframework.stereotype.Service;
import javax.imageio.ImageIO;
import java.io.ByteArrayOutputStream;
@Slf4j
@Service
@RequiredArgsConstructor
public class ImageClassificationService {
private final ImageClassificationClient imageClassificationClient;
private final RedactionServiceSettings settings;
public void classifyImages(Page page) {
page.getImages().forEach(image -> {
if (settings.isEnableImageClassification() && !isEntirePageImage(image, page)) {
long start = System.currentTimeMillis();
try (ByteArrayOutputStream baos = new ByteArrayOutputStream()) {
ImageIO.write(image.getImage(), "png", baos);
var mockFile = new MockMultipartFile("file", "Image.png", "image/png", baos.toByteArray());
ImageClassificationResponse response = imageClassificationClient.classify(mockFile);
image.setImageType(ImageType.valueOf(response.getCategory()));
} catch (Exception e) {
log.error("Could not classify image", e);
image.setImageType(ImageType.OTHER);
}
log.info("Image classification took: " + (System.currentTimeMillis() - start));
} else {
image.setImageType(ImageType.OTHER);
}
image.getImage().flush();
image.setImage(null);
if (image.getImageType().equals(ImageType.OTHER)) {
page.getTextBlocks().forEach(textblock -> {
if (image.getPosition()
.contains(textblock.getMinX(), textblock.getMinY(), textblock.getWidth(), textblock.getHeight())) {
image.setImageType(ImageType.OCR);
}
});
}
});
}
private boolean isEntirePageImage(PdfImage image, Page page){
double imageArea = image.getPosition().getHeight() * image.getPosition().getWidth();
if(imageArea / page.getCropBoxArea() >= settings.getMaxImageCropboxRatio()){
log.info("Skipping image classification because images is almost as large as the entire page");
return true;
}
return false;
}
}
@@ -50,7 +50,13 @@ public class RedactionChangeLogService {
.equals(ChangeType.REMOVED))
.collect(Collectors.toList());
Set<RedactionLogEntry> added = new HashSet<>(currentRedactionLog.getRedactionLogEntry());
Set<RedactionLogEntry> added = new HashSet<>(currentRedactionLog.getRedactionLogEntry().stream()
.filter(entry -> entry.getChanges().isEmpty() || !entry.getChanges()
.get(entry.getChanges().size() - 1)
.getType()
.equals(ChangeType.REMOVED))
.collect(Collectors.toList()));
added.removeAll(notRemovedPreviousEntries);
Set<RedactionLogEntry> removed = new HashSet<>(notRemovedPreviousEntries);
@@ -140,14 +140,14 @@ public class RedactionLogCreatorService {
} else {
float x = textPositions.get(0).getXDirAdj();
float y = textPositions.get(0).getYDirAdj();
float width = textPositions.get(0).getWidth();
float width = textPositions.get(0).getWidthDirAdj();
float height = textPositions.get(0).getHeightDir();
int startIndex = 0;
for (int i = 1; i < textPositions.size(); i++) {
float xDirAdj = textPositions.get(i).getXDirAdj();
float yDirAdj = textPositions.get(i).getYDirAdj();
float widthDir = textPositions.get(i).getWidth();
float widthDir = textPositions.get(i).getWidthDirAdj();
float heightDir = textPositions.get(i).getHeightDir();
if (!(isCharInSameLine(y, yDirAdj, height, heightDir) && isCharClose(x, xDirAdj, width))) {
@@ -1,36 +1,17 @@
package com.iqser.red.service.redaction.v1.server.redaction.service;
import java.time.OffsetDateTime;
import java.util.ArrayList;
import java.util.Collections;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.AnnotationStatus;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.Comment;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.IdRemoval;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.ManualForceRedaction;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.ManualImageRecategorization;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.ManualLegalBasisChange;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.ManualResizeRedaction;
import com.iqser.red.service.redaction.v1.model.ManualRedactionType;
import com.iqser.red.service.redaction.v1.model.Point;
import com.iqser.red.service.persistence.service.v1.api.model.annotations.*;
import com.iqser.red.service.redaction.v1.model.Rectangle;
import com.iqser.red.service.redaction.v1.model.RedactionLog;
import com.iqser.red.service.redaction.v1.model.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.model.SectionGrid;
import com.iqser.red.service.redaction.v1.model.*;
import lombok.AllArgsConstructor;
import lombok.Data;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
import org.springframework.stereotype.Service;
import java.time.OffsetDateTime;
import java.util.*;
import java.util.stream.Collectors;
@Slf4j
@Service
@@ -166,34 +147,44 @@ public class RedactionLogMergeService {
if (mrw.getItem() instanceof IdRemoval) {
var manualRemoval = (IdRemoval) mrw.getItem();
String manualOverrideReason = null;
if (manualRemoval.getStatus().equals(AnnotationStatus.APPROVED)) {
redactionLogEntry.setRedacted(false);
redactionLogEntry.setStatus(AnnotationStatus.APPROVED);
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", removed by manual override");
redactionLogEntry.setColor(getColor(redactionLogEntry.getType(), dossierTemplateId, false, redactionLogEntry.isRedacted(), true));
redactionLogEntry.setHasBeenRemovedByManualOverride(true);
} else if (manualRemoval.getStatus().equals(AnnotationStatus.REQUESTED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", requested to remove");
redactionLogEntry.setStatus(AnnotationStatus.REQUESTED);
redactionLogEntry.setColor(getColor(redactionLogEntry.getType(), dossierTemplateId, true, redactionLogEntry.isRedacted(), false));
if (manualRemoval.getStatus().equals(AnnotationStatus.APPROVED) && manualRemoval.isRemoveFromDictionary()) {
log.info("Skipping merge for dictionary-modifying entry");
} else {
redactionLogEntry.setStatus(AnnotationStatus.DECLINED);
}
String manualOverrideReason = null;
if (manualRemoval.getStatus().equals(AnnotationStatus.APPROVED)) {
redactionLogEntry.setRedacted(false);
redactionLogEntry.setStatus(AnnotationStatus.APPROVED);
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", removed by manual override");
redactionLogEntry.setColor(getColor(redactionLogEntry.getType(), dossierTemplateId, false, redactionLogEntry.isRedacted(), true));
redactionLogEntry.setHint(false);
redactionLogEntry.setHasBeenRemovedByManualOverride(true);
} else if (manualRemoval.getStatus().equals(AnnotationStatus.REQUESTED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", requested to remove");
redactionLogEntry.setStatus(AnnotationStatus.REQUESTED);
redactionLogEntry.setColor(getColor(redactionLogEntry.getType(), dossierTemplateId, true, redactionLogEntry.isRedacted(), false));
} else {
redactionLogEntry.setStatus(AnnotationStatus.DECLINED);
}
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionUserId(manualRemoval.getUser());
redactionLogEntry.setManualRedactionType(ManualRedactionType.REMOVE);
redactionLogEntry.setDictionaryEntry(manualRemoval.isRemoveFromDictionary());
redactionLogEntry.setDossierDictionaryEntry(manualRemoval.isRemoveFromDictionary());
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionUserId(manualRemoval.getUser());
redactionLogEntry.setManualRedactionType(ManualRedactionType.REMOVE);
redactionLogEntry.setDictionaryEntry(manualRemoval.isRemoveFromDictionary());
redactionLogEntry.setDossierDictionaryEntry(manualRemoval.isRemoveFromDictionary());
}
}
if (mrw.getItem() instanceof ManualForceRedaction) {
var manualForceRedact = (ManualForceRedaction) mrw.getItem();
String manualOverrideReason = null;
if (manualForceRedact.getStatus().equals(AnnotationStatus.APPROVED)) {
redactionLogEntry.setRedacted(true);
// Forcing a skipped hint should result in a hint
if (dictionaryService.isHint(redactionLogEntry.getType(), dossierTemplateId)) {
redactionLogEntry.setHint(true);
} else {
redactionLogEntry.setRedacted(true);
}
redactionLogEntry.setStatus(AnnotationStatus.APPROVED);
redactionLogEntry.setColor(getColor(redactionLogEntry.getType(), dossierTemplateId, false, redactionLogEntry.isRedacted(), false));
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", forced by manual override");
@@ -1,165 +0,0 @@
package com.iqser.red.service.redaction.v1.server.segmentation;
import java.awt.Graphics;
import java.awt.geom.Rectangle2D;
import java.awt.image.BufferedImage;
import java.util.ArrayList;
import java.util.List;
import org.springframework.stereotype.Service;
import com.iqser.red.service.redaction.v1.server.redaction.model.PdfImage;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@RequiredArgsConstructor
public class ImageMergeService {
public List<PdfImage> mergeImages(List<PdfImage> images, int rotation){
List<PdfImage> mergedList = processImages(images, rotation);
List<PdfImage> imagesInImage = new ArrayList<>();
for(PdfImage image: mergedList){
for (PdfImage inner: mergedList){
if(image != inner && image.getPosition().contains(inner.getPosition().getX(), inner.getPosition().getY(), inner.getPosition().getWidth(), inner.getPosition().getHeight())){
imagesInImage.add(inner);
}
}
}
mergedList.removeAll(imagesInImage);
return mergedList;
}
//merge images, if they are separated during pdf import, return new list of Pdfimages
private List<PdfImage> processImages(List<PdfImage> imageList, int rotation) {
if (imageList.size() > 1) {
List<PdfImage> mergedList = new ArrayList<>();
int countElementsInList = 0;
boolean beginImage = true;
// a List of Boolean, true = candidate for merging, false = no merging
List<Boolean> candidatesList = getCandidatesList(imageList, rotation);
// loop through list, if there are candidates for merging (true), merge images and add it to mergedList
for (int i = 0; i < candidatesList.size(); i++) {
if (candidatesList.get(i)) {
if (beginImage) {
//begin of image, merge two parts of imageList
PdfImage mergedImage = mergeTwoImages(imageList.get(i), imageList.get(i + 1), rotation);
// image merge successful
if (mergedImage != null) {
mergedList.add(mergedImage);
countElementsInList++;
}
} else {
//middle of an image, merge current piece auf mergedList with image of imageList
PdfImage mergedImage = mergeTwoImages(mergedList.get(countElementsInList - 1), imageList.get(i + 1), rotation);
// image merge successful
if (mergedImage != null) {
mergedList.set(countElementsInList - 1, mergedImage);
}
}
beginImage = false;
} else {
// if the last candidate is false, then both images i and i+1 must be added
if (i == candidatesList.size() - 1) {
if (countElementsInList > 0 && mergedList.get(countElementsInList - 1) == imageList.get(i)) {
mergedList.add(imageList.get(i + 1));
} else {
mergedList.add(imageList.get(i));
mergedList.add(imageList.get(i + 1));
}
} else {
//first image is not splitted, add i to resultlist
if (beginImage) {
mergedList.add(imageList.get(i));
countElementsInList++;
} else {
// i is the end of an image, add begin of new image
mergedList.add(imageList.get(i + 1));
countElementsInList++;
beginImage = false;
}
}
}
}
return mergedList;
} else {
return imageList;
}
}
private PdfImage mergeTwoImages(PdfImage image1, PdfImage image2, int rotation) {
// diese Angaben von getPosition scheinen nicht richtig zu sein, damit werden teile des Bildes abgeschnitten
double width = image1.getPosition().getWidth();
double width2 = image2.getPosition().getWidth();
double height1 = image1.getPosition().getHeight();
double height2 = image2.getPosition().getHeight();
// mit den Werten, die unter Image gespeichert sind, funktioniert es
double img1height = image1.getImage().getHeight();
double img1width = image1.getImage().getWidth();
double img2height = image2.getImage().getHeight();
BufferedImage mergedImage = new BufferedImage((int) img1width, (int) (img1height + img2height), BufferedImage.TYPE_INT_RGB);
Graphics mergedImageGraphics = mergedImage.getGraphics();
try {
mergedImageGraphics.drawImage(image1.getImage(), 0, 0, null);
mergedImageGraphics.drawImage(image2.getImage(), 0, (int) (img1height), null);
// set Image, Position and type for merged Image
//set position for merged image with values of image1 and the height of both
Rectangle2D pos = new Rectangle2D.Float();
pos.setRect(image1.getPosition().getX(), image2.getPosition().getY(), rotation == 90 ? width + width2: width, rotation == 90 ? height1 : height1 + height2);
PdfImage newPdfImage = new PdfImage(mergedImage, pos, image1.getPage(), image1.isHasTransparency() || image2.isHasTransparency());
// Graphics need to be disposed
image1.getImage().flush();
image2.getImage().flush();
mergedImage.flush();
mergedImageGraphics.dispose();
return newPdfImage;
} catch (Exception e) {
// failed to merge image
log.error("Failed to merge image", e);
return null;
}
}
//make a list of true and false, if the image is a candidate for merging
private List<Boolean> getCandidatesList(List<PdfImage> imageList, int rotation) {
List<Boolean> candidatesList = new ArrayList<>();
for (int i = 0; i < imageList.size(); i++) {
if (i >= 1) {
candidatesList.add(isCandidateForMerging(imageList.get(i - 1), imageList.get(i), rotation));
}
}
return candidatesList;
}
// evaluate if two images are candidates for merging, depending on their coordinates, width and height
private boolean isCandidateForMerging(PdfImage image1, PdfImage image2, int rotation) {
double x1 = rotation == 90 ? image1.getPosition().getY() : image1.getPosition().getX();
double y1 = rotation == 90 ? image1.getPosition().getX() : image1.getPosition().getY();
double width1 = rotation == 90 ? image1.getPosition().getHeight() : image1.getPosition().getWidth();
double x2 = rotation == 90 ? image2.getPosition().getY() : image2.getPosition().getX();
double y2 = rotation == 90 ? image2.getPosition().getX() : image2.getPosition().getY();
double width2 = rotation == 90 ? image2.getPosition().getHeight() : image2.getPosition().getWidth();
double height2 = rotation == 90 ? image2.getPosition().getWidth() : image2.getPosition().getHeight();
//if the x-coordinates and widths of images are equal and the height is equal to difference between y-coordinates,
// then it is the same picture and has to be merged -> return true
return x1 == x2 && width1 == width2 && Math.ceil(height2) == Math.ceil(rotation == 90 ? y2 - y1 : y1 - y2) && width2 > (height2 / 6);
}
}
@@ -0,0 +1,61 @@
package com.iqser.red.service.redaction.v1.server.segmentation;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import org.springframework.stereotype.Service;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.iqser.red.service.persistence.service.v1.api.model.dossiertemplate.dossier.file.FileType;
import com.iqser.red.service.redaction.v1.server.classification.model.Page;
import com.iqser.red.service.redaction.v1.server.redaction.model.ImageType;
import com.iqser.red.service.redaction.v1.server.redaction.model.PdfImage;
import com.iqser.red.service.redaction.v1.server.redaction.model.RedRectangle2D;
import com.iqser.red.service.redaction.v1.server.redaction.model.image.ImageServiceResponse;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import lombok.RequiredArgsConstructor;
import lombok.SneakyThrows;
@Service
@RequiredArgsConstructor
public class ImageService {
private final ObjectMapper objectMapper;
private final RedactionStorageService redactionStorageService;
@SneakyThrows
public Map<Integer, List<PdfImage>> convertImages(String dossierId, String fileId){
var imageClassificationStream = redactionStorageService.getStoredObject(RedactionStorageService.StorageIdUtils.getStorageId(dossierId, fileId, FileType.IMAGE_INFO));
ImageServiceResponse imageServiceResponse = objectMapper.readValue(imageClassificationStream, ImageServiceResponse.class);
Map<Integer, List<PdfImage>> images = new HashMap<>();
imageServiceResponse.getImageMetadata().stream().forEach(imageMetadata -> {
var classification = imageMetadata.getFilters().isAllPassed() ? ImageType.valueOf(imageMetadata.getClassification().getLabel().toUpperCase(Locale.ROOT)) : ImageType.OTHER;
images.computeIfAbsent(imageMetadata.getPosition().getPageNumber() ,x -> new ArrayList<>())
.add(new PdfImage(new RedRectangle2D(imageMetadata.getPosition().getX1(), imageMetadata.getPosition().getY1(), imageMetadata.getGeometry().getWidth(), imageMetadata.getGeometry().getHeight()), classification, imageMetadata.getPosition().getPageNumber()));
});
return images;
}
public void findOcr(Page page){
page.getImages().forEach(image -> {
if (image.getImageType().equals(ImageType.OTHER)) {
page.getTextBlocks().forEach(textblock -> {
if (image.getPosition()
.contains(textblock.getMinX(), textblock.getMinY(), textblock.getWidth(), textblock.getHeight())) {
image.setImageType(ImageType.OCR);
}
});
}
});
}
}
@@ -10,6 +10,7 @@ import java.nio.file.attribute.PosixFilePermission;
import java.nio.file.attribute.PosixFilePermissions;
import java.util.ArrayList;
import java.util.List;
import java.util.Map;
import java.util.Set;
import org.apache.commons.io.IOUtils;
@@ -29,7 +30,6 @@ import com.iqser.red.service.redaction.v1.server.memory.MemoryStats;
import com.iqser.red.service.redaction.v1.server.parsing.PDFLinesTextStripper;
import com.iqser.red.service.redaction.v1.server.parsing.model.TextPositionSequence;
import com.iqser.red.service.redaction.v1.server.redaction.model.PdfImage;
import com.iqser.red.service.redaction.v1.server.redaction.service.ImageClassificationService;
import com.iqser.red.service.redaction.v1.server.tableextraction.model.AbstractTextContainer;
import com.iqser.red.service.redaction.v1.server.tableextraction.model.CleanRulings;
import com.iqser.red.service.redaction.v1.server.tableextraction.service.RulingCleaningService;
@@ -50,17 +50,10 @@ public class PdfSegmentationService {
private final BlockificationService blockificationService;
private final ClassificationService classificationService;
private final SectionsBuilderService sectionsBuilderService;
private final ImageClassificationService imageClassificationService;
private final ImageMergeService imageMergeService;
private final ImageService imageService;
public Document parseDocument(InputStream documentInputStream) throws IOException {
return parseDocument(documentInputStream, false);
}
public Document parseDocument(InputStream documentInputStream, boolean ignoreImages) throws IOException {
public Document parseDocument(InputStream documentInputStream, Map<Integer, List<PdfImage>> pdfImages) throws IOException {
PDDocument pdDocument = null;
try {
@@ -122,15 +115,14 @@ public class PdfSegmentationService {
page.setLandscape(isLandscape || isRotated);
page.setPageNumber(pageNumber);
List<PdfImage> mergedList = imageMergeService.mergeImages(stripper.getImages(), rotation);
page.setImages(mergedList);
tableExtractionService.extractTables(cleanRulings, page);
buildPageStatistics(page);
increaseDocumentStatistics(page, document);
if (!ignoreImages) {
imageClassificationService.classifyImages(page);
if (pdfImages != null && pdfImages.containsKey(pageNumber)) {
page.setImages(pdfImages.get(pageNumber));
imageService.findOcr(page);
}
pages.add(page);
@@ -211,7 +211,11 @@ public class SectionsBuilderService {
if (previous != null && previous.getText().startsWith("Table ")) {
table.setHeadline(previous.getText());
} else {
table.setHeadline("Table in: " + lastHeadline);
if(lastHeadline == null || lastHeadline.isEmpty()) {
table.setHeadline("Text in table");
} else {
table.setHeadline("Table in: " + lastHeadline);
}
}
if (textBlock != null && !alreadyAdded) {
@@ -1,22 +1,25 @@
package com.iqser.red.service.redaction.v1.server.storage;
import java.io.IOException;
import java.io.InputStream;
import org.springframework.core.io.InputStreamResource;
import org.springframework.stereotype.Service;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.iqser.red.service.persistence.service.v1.api.model.dossiertemplate.dossier.file.FileType;
import com.iqser.red.service.redaction.v1.model.RedactionLog;
import com.iqser.red.service.redaction.v1.model.SectionGrid;
import com.iqser.red.service.redaction.v1.server.classification.model.Text;
import com.iqser.red.service.redaction.v1.server.client.model.NerEntities;
import com.iqser.red.service.redaction.v1.server.exception.NotFoundException;
import com.iqser.red.storage.commons.exception.StorageObjectDoesNotExist;
import com.iqser.red.storage.commons.service.StorageService;
import lombok.Getter;
import lombok.RequiredArgsConstructor;
import lombok.SneakyThrows;
import lombok.extern.slf4j.Slf4j;
import org.springframework.core.io.InputStreamResource;
import org.springframework.stereotype.Service;
import java.io.IOException;
import java.io.InputStream;
@Slf4j
@Service
@@ -26,14 +29,17 @@ public class RedactionStorageService {
private final ObjectMapper objectMapper;
private final StorageService storageService;
@SneakyThrows
public InputStream getStoredObject(String storageId) {
return storageService.getObject(storageId).getInputStream();
}
@SneakyThrows
public void storeObject(String dossierId, String fileId, FileType fileType, Object any) {
storageService.storeObject(StorageIdUtils.getStorageId(dossierId, fileId, fileType), objectMapper.writeValueAsBytes(any));
}
@@ -92,12 +98,13 @@ public class RedactionStorageService {
}
public SectionGrid getSectionGrid(String dossierId, String fileId) {
var sectionGrid = storageService.getObject(StorageIdUtils.getStorageId(dossierId, fileId, FileType.SECTION_GRID));
try {
var sectionGrid = storageService.getObject(StorageIdUtils.getStorageId(dossierId, fileId, FileType.SECTION_GRID));
return objectMapper.readValue(sectionGrid.getInputStream(), SectionGrid.class);
} catch (StorageObjectDoesNotExist e) {
throw new NotFoundException("Section Grid is not available.");
} catch (IOException e) {
throw new RuntimeException("Could not convert RedactionLog", e);
}
@@ -116,8 +123,12 @@ public class RedactionStorageService {
public static class StorageIdUtils {
public static String getStorageId(String dossierId, String fileId, FileType fileType) {
return dossierId + "/" + fileId + "." + fileType.name() + fileType.getExtension();
}
}
}
@@ -24,7 +24,6 @@ import java.util.UUID;
import java.util.stream.Collectors;
import org.apache.commons.io.IOUtils;
import org.apache.commons.lang3.StringUtils;
import org.junit.After;
import org.junit.Before;
import org.junit.Ignore;
@@ -76,13 +75,13 @@ import com.iqser.red.service.redaction.v1.model.RedactionResult;
import com.iqser.red.service.redaction.v1.model.StructureAnalyzeRequest;
import com.iqser.red.service.redaction.v1.server.classification.model.SectionText;
import com.iqser.red.service.redaction.v1.server.client.DictionaryClient;
import com.iqser.red.service.redaction.v1.server.client.ImageClassificationClient;
import com.iqser.red.service.redaction.v1.server.client.LegalBasisClient;
import com.iqser.red.service.redaction.v1.server.client.RulesClient;
import com.iqser.red.service.redaction.v1.server.controller.RedactionController;
import com.iqser.red.service.redaction.v1.server.memory.MemoryStats;
import com.iqser.red.service.redaction.v1.server.redaction.service.AnalyzeService;
import com.iqser.red.service.redaction.v1.server.redaction.service.ManualRedactionSurroundingTextService;
import com.iqser.red.service.redaction.v1.server.redaction.utils.OsUtils;
import com.iqser.red.service.redaction.v1.server.redaction.utils.ResourceLoader;
import com.iqser.red.service.redaction.v1.server.redaction.utils.TextNormalizationUtilities;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
@@ -137,9 +136,6 @@ public class RedactionIntegrationTest {
@MockBean
private DictionaryClient dictionaryClient;
@MockBean
private ImageClassificationClient imageClassificationClient;
@Autowired
private RedactionStorageService redactionStorageService;
@@ -595,7 +591,7 @@ public class RedactionIntegrationTest {
.fileId(TEST_FILE_ID)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Annotated3.pdf")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Annotated3.pdf")) {
fileOutputStream.write(annotateResponse.getDocument());
}
long rstart = System.currentTimeMillis();
@@ -622,12 +618,65 @@ public class RedactionIntegrationTest {
var redactionLog = redactionStorageService.getRedactionLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var values = redactionLog.getRedactionLogEntry().stream().map(RedactionLogEntry::getValue).collect(Collectors.toList());
var values = redactionLog.getRedactionLogEntry()
.stream()
.map(RedactionLogEntry::getValue)
.collect(Collectors.toList());
assertThat(values).containsExactlyInAnyOrder("Lastname M.", "Doe", "Doe J.", "M. Mustermann", "Mustermann M.", "F. Lastname");
}
@Test
@SneakyThrows
public void testIgnoreHint() {
System.out.println("testIgnoreHint");
ClassPathResource pdfFileResource = new ClassPathResource("files/new/test-ignore-hint.pdf");
AnalyzeRequest request = prepareStorage(pdfFileResource.getInputStream());
analyzeService.analyzeDocumentStructure(new StructureAnalyzeRequest(request.getDossierId(), request.getFileId()));
analyzeService.analyze(request);
var redactionLog = redactionStorageService.getRedactionLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var toRemove = IdRemoval.builder()
.annotationId("c630599611e6e3db314518374bcf70f7")
.status(AnnotationStatus.APPROVED)
.user("test")
.removeFromDictionary(false)
.processedDate(OffsetDateTime.now())
.requestDate(OffsetDateTime.now())
.build();
var manualRedactions = ManualRedactions.builder().idsToRemove(Set.of(toRemove)).build();
request.setManualRedactions(manualRedactions);
analyzeService.reanalyze(request);
var mergedRedactionLog = redactionController.getRedactionLog(RedactionRequest.builder()
.manualRedactions(manualRedactions)
.dossierTemplateId(TEST_DOSSIER_TEMPLATE_ID)
.dossierId(TEST_DOSSIER_ID)
.fileId(TEST_FILE_ID)
.build());
var cbiAddressBeforeHintRemoval = redactionLog.getRedactionLogEntry()
.stream()
.filter(re -> re.getType().equalsIgnoreCase("CBI_Address"))
.findAny()
.get();
assertThat(cbiAddressBeforeHintRemoval.isRedacted()).isFalse();
var cbiAddressAfterHintRemoval = mergedRedactionLog.getRedactionLogEntry()
.stream()
.filter(re -> re.getType().equalsIgnoreCase("CBI_Address"))
.findAny()
.get();
assertThat(cbiAddressAfterHintRemoval.isRedacted()).isTrue();
}
@Test
@Ignore
public void noExceptionShouldBeThrownForAnyFiles() throws IOException {
@@ -685,7 +734,7 @@ public class RedactionIntegrationTest {
public void redactionTestSeparatedRedaction() throws IOException {
String fileName = "scanned/VV-380943_page38.pdf";
String outputFileName = getTemporaryDirectory() + "/AnnotatedRedactionTestSeparatedRedaction.pdf";
String outputFileName = OsUtils.getTemporaryDirectory() + "/AnnotatedRedactionTestSeparatedRedaction.pdf";
long start = System.currentTimeMillis();
ClassPathResource pdfFileResource = new ClassPathResource(fileName);
@@ -709,7 +758,7 @@ public class RedactionIntegrationTest {
System.out.println("first analysis duration: " + (end - start));
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Test.json")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Test.json")) {
fileOutputStream.write(objectMapper.writeValueAsBytes(redactionStorageService.getText(TEST_DOSSIER_ID, TEST_FILE_ID)));
}
@@ -794,15 +843,60 @@ public class RedactionIntegrationTest {
redactionLog = redactionStorageService.getRedactionLog(TEST_DOSSIER_ID, TEST_FILE_ID);
System.out.println("hi");
System.out.println("Output file:" + outputFileName);
}
@Test
public void testChangeComputation() throws IOException {
String fileName = "files/new/test1S1T1.pdf";
String outputFileName = OsUtils.getTemporaryDirectory() + "/Annotated.pdf";
ClassPathResource pdfFileResource = new ClassPathResource(fileName);
AnalyzeRequest request = prepareStorage(pdfFileResource.getInputStream());
analyzeService.analyzeDocumentStructure(new StructureAnalyzeRequest(request.getDossierId(), request.getFileId()));
analyzeService.analyze(request);
dictionary.get(AUTHOR).add("report");
reanlysisVersions.put("report", 2L);
when(dictionaryClient.getVersion(TEST_DOSSIER_TEMPLATE_ID)).thenReturn(2L);
when(dictionaryClient.getDictionaryForType(AUTHOR +":" + TEST_DOSSIER_TEMPLATE_ID)).thenReturn(getDictionaryResponse(AUTHOR, false));
analyzeService.reanalyze(request);
dictionary.get(AUTHOR).add("assessment report");
reanlysisVersions.put("assessment report", 3L);
when(dictionaryClient.getVersion(TEST_DOSSIER_TEMPLATE_ID)).thenReturn(3L);
when(dictionaryClient.getDictionaryForType(AUTHOR +":" + TEST_DOSSIER_TEMPLATE_ID)).thenReturn(getDictionaryResponse(AUTHOR, false));
analyzeService.reanalyze(request);
when(dictionaryClient.getVersion(TEST_DOSSIER_TEMPLATE_ID)).thenReturn(3L);
when(dictionaryClient.getDictionaryForType(AUTHOR +":" + TEST_DOSSIER_TEMPLATE_ID)).thenReturn(getDictionaryResponse(AUTHOR, false));
analyzeService.reanalyze(request);
var redactionLog = redactionStorageService.getRedactionLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var changes = redactionLog.getRedactionLogEntry().stream().filter(entry ->
entry.getValue() != null && entry.getValue().equals("report"))
.findFirst().get().getChanges();
assertThat(changes.size()).isEqualTo(2);
AnnotateResponse annotateResponse = redactionController.annotate(AnnotateRequest.builder()
.dossierId(TEST_DOSSIER_ID)
.fileId(TEST_FILE_ID)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream(outputFileName)) {
fileOutputStream.write(annotateResponse.getDocument());
}
}
@Test
public void redactionTest() throws IOException {
String fileName = "files/new/VV-919901.pdf";
String outputFileName = getTemporaryDirectory() + "/Annotated.pdf";
String fileName = "files/new/Single Study - Oral (Gavage) Mouse.pdf";
String outputFileName = OsUtils.getTemporaryDirectory() + "/Annotated.pdf";
long start = System.currentTimeMillis();
ClassPathResource pdfFileResource = new ClassPathResource(fileName);
@@ -826,7 +920,7 @@ public class RedactionIntegrationTest {
System.out.println("first analysis duration: " + (end - start));
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Test.json")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Test.json")) {
fileOutputStream.write(objectMapper.writeValueAsBytes(redactionStorageService.getText(TEST_DOSSIER_ID, TEST_FILE_ID)));
}
@@ -911,7 +1005,7 @@ public class RedactionIntegrationTest {
redactionLog = redactionStorageService.getRedactionLog(TEST_DOSSIER_ID, TEST_FILE_ID);
System.out.println("hi");
System.out.println("Output file:" + outputFileName);
}
@@ -930,7 +1024,7 @@ public class RedactionIntegrationTest {
.fileId(TEST_FILE_ID)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Annotated.pdf")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Annotated.pdf")) {
fileOutputStream.write(annotateResponse.getDocument());
}
long end = System.currentTimeMillis();
@@ -1024,7 +1118,7 @@ public class RedactionIntegrationTest {
.fileId(TEST_FILE_ID)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Annotated.pdf")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Annotated.pdf")) {
fileOutputStream.write(annotateResponse.getDocument());
}
long end = System.currentTimeMillis();
@@ -1050,7 +1144,7 @@ public class RedactionIntegrationTest {
RedactionResult result = redactionController.classify(redactionRequest);
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Classified.pdf")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Classified.pdf")) {
fileOutputStream.write(result.getDocument());
}
}
@@ -1072,7 +1166,7 @@ public class RedactionIntegrationTest {
RedactionResult result = redactionController.sections(redactionRequest);
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Sections.pdf")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Sections.pdf")) {
fileOutputStream.write(result.getDocument());
}
}
@@ -1094,7 +1188,7 @@ public class RedactionIntegrationTest {
RedactionResult result = redactionController.htmlTables(redactionRequest);
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Tables.html")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Tables.html")) {
fileOutputStream.write(result.getDocument());
}
}
@@ -1116,7 +1210,7 @@ public class RedactionIntegrationTest {
RedactionResult result = redactionController.htmlTables(redactionRequest);
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Tables.html")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Tables.html")) {
fileOutputStream.write(result.getDocument());
}
}
@@ -1186,7 +1280,7 @@ public class RedactionIntegrationTest {
.fileId(TEST_FILE_ID)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Annotated.pdf")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Annotated.pdf")) {
fileOutputStream.write(annotateResponse.getDocument());
}
long end = System.currentTimeMillis();
@@ -1319,12 +1413,13 @@ public class RedactionIntegrationTest {
.manualRedactions(manualRedactions)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Annotated.pdf")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Annotated.pdf")) {
fileOutputStream.write(annotateResponse.getDocument());
}
}
@Test
public void testExpandByRegEx() throws IOException {
@@ -1340,7 +1435,7 @@ public class RedactionIntegrationTest {
.fileId(TEST_FILE_ID)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Annotated.pdf")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Annotated.pdf")) {
fileOutputStream.write(annotateResponse.getDocument());
}
long end = System.currentTimeMillis();
@@ -1418,7 +1513,7 @@ public class RedactionIntegrationTest {
.manualRedactions(manualRedactions)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Annotated.pdf")) {
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Annotated.pdf")) {
fileOutputStream.write(annotateResponse.getDocument());
}
@@ -1466,14 +1561,4 @@ public class RedactionIntegrationTest {
}
private static String getTemporaryDirectory() {
String tmpdir = System.getProperty("java.io.tmpdir");
if (StringUtils.isNotBlank(tmpdir)) {
return tmpdir;
}
return "/tmp";
}
}
@@ -0,0 +1,22 @@
package com.iqser.red.service.redaction.v1.server.redaction.utils;
import org.apache.commons.lang3.StringUtils;
public class OsUtils {
public static boolean isWindows() {
return StringUtils.containsIgnoreCase(System.getProperty("os.name"), "Windows");
}
public static String getTemporaryDirectory() {
String tmpdir = System.getProperty("java.io.tmpdir");
if (isWindows() && StringUtils.isNotBlank(tmpdir)) {
return tmpdir;
}
return "/tmp";
}
}
@@ -1,12 +1,16 @@
package com.iqser.red.service.redaction.v1.server.segmentation;
import com.amazonaws.services.s3.AmazonS3;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.iqser.red.service.redaction.v1.server.Application;
import com.iqser.red.service.redaction.v1.server.classification.model.Document;
import com.iqser.red.service.redaction.v1.server.classification.model.Page;
import com.iqser.red.service.redaction.v1.server.classification.service.BlockificationService;
import com.iqser.red.service.redaction.v1.server.client.LegalBasisClient;
import com.iqser.red.service.redaction.v1.server.redaction.model.ImageType;
import com.iqser.red.service.redaction.v1.server.redaction.model.PdfImage;
import com.iqser.red.service.redaction.v1.server.redaction.model.RedRectangle2D;
import com.iqser.red.service.redaction.v1.server.redaction.model.image.ImageServiceResponse;
import com.iqser.red.service.redaction.v1.server.tableextraction.model.Cell;
import com.iqser.red.service.redaction.v1.server.tableextraction.model.Table;
import com.iqser.red.service.redaction.v1.server.tableextraction.service.RulingCleaningService;
@@ -31,12 +35,18 @@ import javax.imageio.ImageIO;
import java.io.ByteArrayOutputStream;
import java.io.FileOutputStream;
import java.io.IOException;
import java.util.ArrayList;
import java.util.Collections;
import java.util.HashMap;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.stream.Collectors;
import static com.iqser.red.service.redaction.v1.server.redaction.utils.OsUtils.getTemporaryDirectory;
import static org.assertj.core.api.Assertions.assertThat;
import lombok.SneakyThrows;
@RunWith(SpringRunner.class)
@SpringBootTest(classes = Application.class, webEnvironment = SpringBootTest.WebEnvironment.RANDOM_PORT)
@@ -67,42 +77,29 @@ public class PdfSegmentationServiceTest {
@MockBean
private LegalBasisClient legalBasisClient;
@Autowired
private ObjectMapper objectMapper;
@Configuration
@EnableAutoConfiguration(exclude = { RabbitAutoConfiguration.class})
public static class TestConfiguration {
}
@Test
public void testMergeImages() throws IOException {
ClassPathResource pdfFileResource = new ClassPathResource("files/Minimal Examples/270Rotated.pdf");
Document document = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
assertThat(document.getPages().get(0).getImages().size()).isEqualTo(1);
assertThat(document.getPages().get(1).getImages().size()).isEqualTo(0);
}
@Test
@Ignore
public void testExtractImages() throws IOException {
@SneakyThrows
public void testMapping(){
ClassPathResource responseJson = new ClassPathResource("files/image_response.json");
ImageServiceResponse imageServiceResponse = objectMapper.readValue(responseJson.getInputStream(), ImageServiceResponse.class);
ClassPathResource pdfFileResource = new ClassPathResource("files/new/Single Study - Oral (Gavage) Mouse.pdf");
Map<Integer, List<PdfImage>> images = new HashMap<>();
imageServiceResponse.getImageMetadata().stream().forEach(imageMetadata -> {
images.computeIfAbsent(imageMetadata.getPosition().getPageNumber() ,x -> new ArrayList<>())
.add(new PdfImage(new RedRectangle2D(imageMetadata.getPosition().getX1(), imageMetadata.getPosition().getY1(), imageMetadata.getGeometry().getWidth(), imageMetadata.getGeometry().getHeight()), ImageType.valueOf(imageMetadata.getClassification().getLabel().toUpperCase(Locale.ROOT)), imageMetadata.getPosition().getPageNumber()));
});
Document document = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
int i = 0;
for (Page page : document.getPages()) {
for (PdfImage image : page.getImages()) {
try (ByteArrayOutputStream baos = new ByteArrayOutputStream()) {
ImageIO.write(image.getImage(), "png", baos);
try (FileOutputStream fileOutputStream = new FileOutputStream(getTemporaryDirectory() + "/Image " + i + ".png")) {
fileOutputStream.write(baos.toByteArray());
}
}
i++;
}
}
System.out.println("object");
}
@@ -111,7 +108,7 @@ public class PdfSegmentationServiceTest {
ClassPathResource pdfFileResource = new ClassPathResource("files/Minimal Examples/Spanning Cells.pdf");
Document document = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
Document document = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream(), null);
assertThat(document.getParagraphs()
.stream()
.flatMap(paragraph -> paragraph.getTables().stream())
@@ -132,7 +129,7 @@ public class PdfSegmentationServiceTest {
ClassPathResource pdfFileResource = new ClassPathResource("files/Minimal Examples/Merge Table.pdf");
Document document = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
Document document = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream(), null);
assertThat(document.getParagraphs()
.stream()
.flatMap(paragraph -> paragraph.getTables().stream())
@@ -170,7 +167,7 @@ public class PdfSegmentationServiceTest {
ClassPathResource pdfFileResource = new ClassPathResource("files/Minimal Examples/Merge Multi Page Table.pdf");
Document document = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
Document document = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream(), null);
assertThat(document.getParagraphs()
.stream()
.flatMap(paragraph -> paragraph.getTables().stream())
@@ -208,7 +205,7 @@ public class PdfSegmentationServiceTest {
ClassPathResource pdfFileResource = new ClassPathResource("files/Minimal Examples/Rotated Table Headers.pdf");
Document document = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
Document document = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream(), null);
assertThat(document.getParagraphs()
.stream()
.flatMap(paragraph -> paragraph.getTables().stream())
@@ -240,12 +237,5 @@ public class PdfSegmentationServiceTest {
.equals(firstTableHeaderCells))).isTrue();
}
private static String getTemporaryDirectory() {
String tmpdir = System.getProperty("java.io.tmpdir");
if (StringUtils.isNotBlank(tmpdir)) {
return tmpdir;
}
return "/tmp";
}
}
@@ -1660,3 +1660,4 @@ Zyma SA
Zyma SA, Nyon, Switzerland
Mambo-Tox Ltd. Biomedical Sciences Building Bassett Crescent East Southampton SO16 7PX UK
Syngenta Environmental Sciences Jealott’s Hill International Research Centre Bracknell, Berkshire RG42 6EY UK
Test Ignored Hint CBI_ADDRESS
@@ -85,3 +85,4 @@ Toxicology and Applied Pharmacology
Toxicol Sci
Toxicol Sci.
Toxicol Sci. 1
Test Ignored Hint Published Information
@@ -0,0 +1,686 @@
{
"dossierId": "f889853e-4bf8-49a9-aae5-c38605c6ef40",
"fileId": "22ef63e29bb2a27db8497272336f6b32",
"imageMetadata": [
{
"classification": {
"probabilities": {
"logo": 1.0,
"signature": 0.0,
"other": 0.0,
"formula": 0.0
},
"label": "logo"
},
"position": {
"x1": 89.88,
"x2": 274.20000000000005,
"y1": 716.24,
"y2": 770.0,
"pageNumber": 1
},
"geometry": {
"width": 184.32000000000005,
"height": 53.75999999999999
},
"filters": {
"geometry": {
"imageSize": {
"quotient": 0.14298074612038092,
"tooLarge": false,
"tooSmall": false
},
"imageFormat": {
"quotient": 3.42857142857143,
"tooTall": false,
"tooWide": false
}
},
"probability": {
"unconfident": false
},
"allPassed": true
}
},
{
"classification": {
"probabilities": {
"signature": 0.999968,
"logo": 1.6e-05,
"other": 1.6e-05,
"formula": 0.0
},
"label": "signature"
},
"position": {
"x1": -0.10000600000000001,
"x2": 595.099994,
"y1": -0.07998660000000002,
"y2": 842.0800134,
"pageNumber": 3
},
"geometry": {
"width": 595.2,
"height": 842.16
},
"filters": {
"geometry": {
"imageSize": {
"quotient": 1.0000782051152328,
"tooLarge": true,
"tooSmall": false
},
"imageFormat": {
"quotient": 0.706754060986036,
"tooTall": false,
"tooWide": false
}
},
"probability": {
"unconfident": false
},
"allPassed": false
}
},
{
"classification": {
"probabilities": {
"signature": 0.999872,
"other": 7.9e-05,
"logo": 4.8e-05,
"formula": 0.0
},
"label": "signature"
},
"position": {
"x1": -0.10000600000000001,
"x2": 595.099994,
"y1": -0.07998660000000002,
"y2": 842.0800134,
"pageNumber": 7
},
"geometry": {
"width": 595.2,
"height": 842.16
},
"filters": {
"geometry": {
"imageSize": {
"quotient": 1.0000782051152328,
"tooLarge": true,
"tooSmall": false
},
"imageFormat": {
"quotient": 0.706754060986036,
"tooTall": false,
"tooWide": false
}
},
"probability": {
"unconfident": false
},
"allPassed": false
}
},
{
"classification": {
"probabilities": {
"signature": 0.996366,
"other": 0.00,
"logo": 2.3e-05,
"formula": 4e-06
},
"label": "signature"
},
"position": {
"x1": -0.10000600000000001,
"x2": 595.099994,
"y1": -0.07998660000000002,
"y2": 842.0800134,
"pageNumber": 8
},
"geometry": {
"width": 595.2,
"height": 842.16
},
"filters": {
"geometry": {
"imageSize": {
"quotient": 1.0002630764355351,
"tooLarge": true,
"tooSmall": false
},
"imageFormat": {
"quotient": 0.706754060986036,
"tooTall": false,
"tooWide": false
}
},
"probability": {
"unconfident": false
},
"allPassed": false
}
},
{
"classification": {
"probabilities": {
"signature": 0.999772,
"logo": 0.000131,
"other": 9.7e-05,
"formula": 0.0
},
"label": "signature"
},
"position": {
"x1": 82.59443842482001,
"x2": 512.6365568843402,
"y1": 116.943736387567,
"y2": 725.0718450317352,
"pageNumber": 73
},
"geometry": {
"width": 430.04211845952017,
"height": 608.1281086441682
},
"filters": {
"geometry": {
"imageSize": {
"quotient": 0.72236755521117,
"tooLarge": false,
"tooSmall": false
},
"imageFormat": {
"quotient": 0.7071571143427432,
"tooTall": false,
"tooWide": false
}
},
"probability": {
"unconfident": false
},
"allPassed": true
}
},
{
"classification": {
"probabilities": {
"signature": 1.0,
"logo": 0.0,
"other": 0.0,
"formula": 0.0
},
"label": "signature"
},
"position": {
"x1": 328.20483600000006,
"x2": 393.94460940000005,
"y1": 175.1643178,
"y2": 203.92865619999998,
"pageNumber": 81
},
"geometry": {
"width": 65.73977339999999,
"height": 28.764338399999986
},
"filters": {
"geometry": {
"imageSize": {
"quotient": 0.06142518774572455,
"tooLarge": false,
"tooSmall": false
},
"imageFormat": {
"quotient": 2.2854609929078022,
"tooTall": false,
"tooWide": false
}
},
"probability": {
"unconfident": false
},
"allPassed": true
}
},
{
"classification": {
"probabilities": {
"signature": 1.0,
"logo": 0.0,
"other": 0.0,
"formula": 0.0
},
"label": "signature"
},
"position": {
"x1": 136.5955818,
"x2": 224.72461859999999,
"y1": 175.1133172,
"y2": 203.97965680000001,
"pageNumber": 81
},
"geometry": {
"width": 88.1290368,
"height": 28.866339600000003
},
"filters": {
"geometry": {
"imageSize": {
"quotient": 0.07124601312700823,
"tooLarge": false,
"tooSmall": false
},
"imageFormat": {
"quotient": 3.053003533568904,
"tooTall": false,
"tooWide": false
}
},
"probability": {
"unconfident": false
},
"allPassed": true
}
},
{
"classification": {
"probabilities": {
"logo": 1.0,
"signature": 0.0,
"other": 0.0,
"formula": 0.0
},
"label": "logo"
},
"position": {
"x1": 194.99126880000003,
"x2": 399.80967840000005,
"y1": 554.6597824,
"y2": 686.2413304,
"pageNumber": 81
},
"geometry": {
"width": 204.81840960000002,
"height": 131.581548
},
"filters": {
"geometry": {
"imageSize": {
"quotient": 0.23189275858788796,
"tooLarge": false,
"tooSmall": false
},
"imageFormat": {
"quotient": 1.5565891472868219,
"tooTall": false,
"tooWide": false
}
},
"probability": {
"unconfident": false
},
"allPassed": true
}
},
{
"classification": {
"probabilities": {
"other": 1.0,
"signature": 0.0,
"formula": 0.0,
"logo": 0.0
},
"label": "other"
},
"position": {
"x1": 133.9945512,
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