DM-305: Improved DocuMine rules #49
@ -329,20 +329,17 @@ rule "DOC.7.0: study title by document structure"
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end
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//rule "DOC.7.0: study title"
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// when
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// $section: Section(isOnPage(1) && (containsString("Final Report") || containsString("SPL")))
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// then
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// entityCreationService.byRegexWithLineBreaks("(?<=\\n)[\\w\\W]{1,300}(?=\\nFinal Report)", "title", EntityType.ENTITY, $section).findFirst().ifPresent(entity -> {
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// entity.apply("DOC.7.0", "Title found", "n-a");
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// });
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// entityCreationService.betweenStrings("TITLE", "DATA REQUIREMENT", "title", EntityType.ENTITY, $section).findFirst().ifPresent(entity -> {
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// entity.apply("DOC.7.0", "Title found", "n-a");
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// });
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// entityCreationService.betweenStrings("Laboratories", "SPL", "title", EntityType.ENTITY, $section).findFirst().ifPresent(entity -> {
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// entity.apply("DOC.7.0", "Title found", "n-a");
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// });
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// end
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rule "DOC.7.1: study title"
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when
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$table: Table(isOnPage(1),
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(containsString("Final Report") || containsString("SPL")),
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numberOfRows == 1,
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numberOfCols == 1)
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then
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entityCreationService.byRegexWithLineBreaksIgnoreCase("(?<=\\n)[\\w\\W]{1,300}(?=\\nFinal Report)", "title", EntityType.ENTITY, $table.getCell(0, 0)).findFirst().ifPresent(entity -> {
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entity.apply("DOC.7.1", "Title found", "n-a");
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});
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end
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rule "DOC.8.1: Performing Laboratory (Name)"
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@ -574,7 +571,7 @@ rule "DOC.12.0: Guideline Deviation"
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entityCreationService.byRegexIgnoreCase("(?>Study plan adherence)(.{1,20}deviations.{1,20} to the study plan.{0,50}\\.)\\s", "guideline_deviation", EntityType.ENTITY, 1, $section).forEach(entity -> {
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entity.apply("DOC.12.0", "Guideline deviation found in text.", "n-a");
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});
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entityCreationService.betweenStrings("Deviations from the study plan", "validity of the study.", "guideline_deviation", EntityType.ENTITY, $section).forEach(entity -> {
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entityCreationService.betweenStringsIncludeEnd("Deviations from the study plan", "validity of the study.", "guideline_deviation", EntityType.ENTITY, $section).forEach(entity -> {
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entity.apply("DOC.12.0", "Deviation from the study plan found", "n-a");
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});
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end
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@ -837,6 +834,18 @@ rule "DOC.24.0: Study Design"
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.forEach(entity -> entity.apply("DOC.24.0", "Study design section found", "n-a"));
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end
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rule "DOC.24.1: Study Design"
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when
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Headline(containsStringIgnoreCase("Study Design"), $sectionIdentifier: getSectionIdentifier())
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$headline: Headline(getSectionIdentifier().isChildOf($sectionIdentifier))
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then
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entityCreationService.bySemanticNodeParagraphsOnly($headline.getParent(), "study_design", EntityType.ENTITY)
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.forEach(entity -> {
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entity.apply("DOC.24.1", "Study design section found", "n-a");
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});
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end
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/*
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rule "DOC.24.0: Study Design"
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when
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@ -924,6 +933,17 @@ rule "DOC.33.0: Test Results (429)"
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.forEach(entity -> entity.apply("DOC.33.0", "Test Results found", "n-a"));
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end
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rule "DOC.33.1: Test Results (429)"
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when
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Headline(containsStringIgnoreCase("RESULTS AND DISCUSSION"), $sectionIdentifierResultsAndDiscussion: getSectionIdentifier())
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$headline: Headline(getSectionIdentifier().isChildOf($sectionIdentifierResultsAndDiscussion))
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then
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entityCreationService.bySemanticNodeParagraphsOnly($headline.getParent(), "test_results", EntityType.ENTITY)
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.forEach(entity -> {
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entity.apply("DOC.33.1", "Test Results found", "n-a");
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});
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end
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rule "DOC.34.0: Approach used (429)"
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when
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