Compare commits

...
Author SHA1 Message Date
Dominique Eifländer 7a7733b8e4 Added equalsIgnoreCase fileattributes methods for rules 2021-08-20 14:51:22 +02:00
Dominique Eiflaender 952a00b19c Pull request #213: RED-1755: Calculate falgs in file-management-service async
Merge in RED/redaction-service from RED-1755-2 to release/2.52.x

* commit 'dd585a13fd8d37319ce695eeb39a87ff197bec15':
  RED-1755: Calculate falgs in file-management-service async
2021-08-18 11:58:28 +02:00
Dominique Eifländer dd585a13fd RED-1755: Calculate falgs in file-management-service async 2021-08-18 10:02:37 +02:00
Dominique Eiflaender 2d305bd6fe Pull request #210: RED-2015: Fixed (Manual) Redactions in download reports/files for excluded pages
Merge in RED/redaction-service from RED-2015 to release/2.52.x

* commit '9650ff75ca44dbb0dc0bb74552a03d3d938015cb':
  RED-2015: Fixed (Manual) Redactions in download reports/files for excluded pages
2021-08-17 12:21:59 +02:00
Dominique Eifländer 9650ff75ca RED-2015: Fixed (Manual) Redactions in download reports/files for excluded pages 2021-08-17 11:28:52 +02:00
Timo Bejan b2acdc646d RedactionLogMergeService.java edited online with Bitbucket 2021-08-13 13:56:23 +02:00
Timo Bejan dc2508d0d0 RedactionLogMergeService.java edited online with Bitbucket 2021-08-13 13:19:53 +02:00
Timo Bejan e5099f321e RedactionLogMergeService.java edited online with Bitbucket 2021-08-13 12:50:15 +02:00
Timo Bejan de2282bc24 Pull request #209: logs
Merge in RED/redaction-service from realease/2.52x-fix to release/2.52.x

* commit 'b1f73fb5b169710a56a74a9ecb55b7e0cc4b7b88':
  logs
2021-08-13 12:33:09 +02:00
Timo Bejan b1f73fb5b1 logs 2021-08-13 13:28:07 +03:00
Timo Bejan fe737108e7 Pull request #208: Proper Order of manual actions based on time
Merge in RED/redaction-service from realease/2.52x-fix to release/2.52.x

* commit 'fe95224471def99ee158dbf150f9985064313070':
  Proper Order of manual actions based on time
2021-08-13 10:27:31 +02:00
Timo Bejan fe95224471 Proper Order of manual actions based on time 2021-08-13 11:22:52 +03:00
Timo Bejan ff7166ed96 Pull request #205: added user-id to all manual entries
Merge in RED/redaction-service from RED-1788 to master

* commit '30715cdcb85e94911c3903fe95b1cb902ed6556f':
  added user-id to all manual entries
2021-08-05 14:50:21 +02:00
Timo Bejan 30715cdcb8 added user-id to all manual entries 2021-08-05 15:35:06 +03:00
Timo Bejan d21ce3f495 Pull request #204: cleanup
Merge in RED/redaction-service from RED-1788 to master

* commit '4bdca5644a7296bd542278ffa2f64e670855fbe5':
  cleanup
2021-08-05 14:30:08 +02:00
Timo Bejan 4bdca5644a cleanup 2021-08-05 13:13:48 +03:00
Timo Bejan 779f5c725c Pull request #203: fixed typo
Merge in RED/redaction-service from RED-1788 to master

* commit 'b08cdd3a07f763c6b310a3403c69d4b9652a0e5c':
  cleaned up code, added analysisVersion for analyseresult and interogation, usefull later
  fixed typo
2021-08-05 10:03:24 +02:00
Timo Bejan b08cdd3a07 cleaned up code, added analysisVersion for analyseresult and interogation, usefull later 2021-08-05 10:59:01 +03:00
Timo Bejan af1fb03025 fixed typo 2021-08-05 10:37:03 +03:00
Timo Bejan a1e9dbb3da Pull request #202: smart reanalysis based on sections to reanalyse provided by search service
Merge in RED/redaction-service from RED-1788 to master

* commit 'cf12e58c77b30fd4ff790a3b038b3ba625aa5a28':
  smart reanalysis based on sections to reanalyse provided by search service
2021-07-29 20:42:27 +02:00
Timo Bejan cf12e58c77 smart reanalysis based on sections to reanalyse provided by search service 2021-07-29 21:07:14 +03:00
Dominique Eifländer 77ece8b0d6 Simplyfied hyphen removal regex 2021-07-29 13:15:21 +02:00
Dominique Eiflaender 6c375b5b7a Pull request #201: Fixed dossier dictionary and dictionary rank sorting
Merge in RED/redaction-service from RankFix to master

* commit '289077e5e386e3a0785e2c849ae06bcb01202d5c':
  Fixed dossier dictionary and dictionary rank sorting
2021-07-29 11:52:25 +02:00
Dominique Eifländer 289077e5e3 Fixed dossier dictionary and dictionary rank sorting 2021-07-29 11:46:15 +02:00
Dominique Eiflaender 2c4c52d891 Pull request #199: RED-1806: Use localDictionary also in Reanlysis to fix problem at removing values from false_positive that affect rules that should find values in entire document
Merge in RED/redaction-service from RED-1806 to master

* commit '0832ea15c09335cfb0d9f0139764ab6c99a22423':
  RED-1806: Use localDictionary also in Reanlysis to fix problem at removing values from false_positive that affect rules that should find values in entire document
2021-07-27 13:08:43 +02:00
Dominique Eifländer 0832ea15c0 RED-1806: Use localDictionary also in Reanlysis to fix problem at removing values from false_positive that affect rules that should find values in entire document 2021-07-26 15:51:00 +02:00
Timo Bejan 62f755c416 Pull request #198: manual redaction fixes
Merge in RED/redaction-service from RED-1839 to master

* commit '00dd6b90081e7e99ac64a27d115a195d6ab0bc2a':
  manual redaction fixes
2021-07-22 21:35:43 +02:00
Timo 00dd6b9008 manual redaction fixes 2021-07-22 22:26:16 +03:00
Timo Bejan d5bb55166d Pull request #197: some logs
Merge in RED/redaction-service from RED-1839 to master

* commit 'da14646cb7d8057c8189736565a024ef13921502':
  some logs
2021-07-22 18:26:44 +02:00
Timo da14646cb7 some logs 2021-07-22 18:52:36 +03:00
Timo Bejan 22531168f0 Pull request #196: RED-1839
Merge in RED/redaction-service from RED-1839 to master

* commit '26e73121e9f3526c2fd68a3965f17adf74e28ede':
  fixed pmd
  fixed pmd
  redaction-log preview generation and removal of manual redactions from redaction-log
  redaction-log preview generation and removal of manual redactions from redaction-log
2021-07-22 08:37:49 +02:00
Timo 26e73121e9 fixed pmd 2021-07-21 17:28:57 +03:00
Timo 25e5594750 fixed pmd 2021-07-21 17:25:50 +03:00
Timo d2ffb09987 redaction-log preview generation and removal of manual redactions from redaction-log 2021-07-21 16:02:07 +03:00
Timo 1ac294fc01 redaction-log preview generation and removal of manual redactions from redaction-log 2021-07-21 16:02:07 +03:00
Dominique Eiflaender b75dbde563 Pull request #195: RED-1813: Added imageHasTransparency to redaction log
Merge in RED/redaction-service from RED-1813 to master

* commit 'ba0cde241fd11ed6fe0bd623561470a108e1b89f':
  RED-1813: Added imageHasTransparency to redaction log
2021-07-20 10:10:20 +02:00
Dominique Eifländer ba0cde241f RED-1813: Added imageHasTransparency to redaction log 2021-07-20 10:02:00 +02:00
Timo Bejan 28c8cebe1a Pull request #194: RED-1830
Merge in RED/redaction-service from RED-1830 to master

* commit 'e9c5b955805b42e3e62ae0aad7affcad05610833':
  fixed compile err
  add comments
2021-07-19 15:49:11 +02:00
Timo e9c5b95580 fixed compile err 2021-07-19 16:30:29 +03:00
Timo e809004f16 add comments 2021-07-19 14:57:59 +03:00
Dominique Eiflaender 04c7993b4b Pull request #193: RED-1184: Always find reanaylsis sections with caseinsentive values to remove values if type has changed from caseinsensitive to casesensitive
Merge in RED/redaction-service from RED-1184 to master

* commit 'a39bbd9afa814577543a33c35dd27c96ec993e79':
  RED-1184: Always find reanaylsis sections with caseinsentive values to remove values if type has changed from caseinsensitive to casesensitive
2021-07-19 13:17:31 +02:00
Dominique Eifländer a39bbd9afa RED-1184: Always find reanaylsis sections with caseinsentive values to remove values if type has changed from caseinsensitive to casesensitive 2021-07-19 13:12:20 +02:00
Timo Bejan 26def889d8 Pull request #192: RED-1830
Merge in RED/redaction-service from RED-1830 to master

* commit 'd4486ea6f4d31d68a2c75ec5e192f2a3bd62443c':
  fixed PMD
  fixed undo after reanalysis
2021-07-19 12:02:54 +02:00
Timo d4486ea6f4 fixed PMD 2021-07-19 11:59:53 +03:00
Timo 0b89c55a1d fixed undo after reanalysis 2021-07-19 11:57:29 +03:00
Timo Bejan 6c0b567299 Pull request #191: fixed undo after reanalysis
Merge in RED/redaction-service from RED-1830 to master

* commit '93844d8e76e0806cf00292b591a9f97ee8e61230':
  fixed undo after reanalysis
2021-07-19 10:46:38 +02:00
Timo 93844d8e76 fixed undo after reanalysis 2021-07-19 11:39:19 +03:00
Timo Bejan a6da970902 Pull request #190: RED-1813: Fixed to large images
Merge in RED/redaction-service from RED-1813 to master

* commit '84db91d74dabc82306911972a0ffface1bcdff3a':
  RED-1813: Fixed to large images
2021-07-14 20:36:47 +02:00
Dominique Eifländer 84db91d74d RED-1813: Fixed to large images 2021-07-14 17:03:32 +02:00
Dominique Eiflaender a1926a4055 Pull request #189: RED-1814: Apply manual image recategorization before rules execution
Merge in RED/redaction-service from RED-1814 to master

* commit 'cb41187be660b5f4180c11e890bae57ebc79308a':
  RED-1814: Apply manual image recategorization before rules execution
2021-07-14 12:59:04 +02:00
Dominique Eifländer cb41187be6 RED-1814: Apply manual image recategorization before rules execution 2021-07-14 12:27:31 +02:00
Timo Bejan c8eb6489fa Pull request #188: Redaction log backend preview remove code duplication from ui
Merge in RED/redaction-service from redaction-log-backend-preview-remove-code-duplication-from-ui to master

* commit '71ba89306715d88ddadaa7780f4935a99bd107d6':
  id removal modifying dict flag
  added logs for dict
2021-07-14 10:40:17 +02:00
Timo 71ba893067 id removal modifying dict flag 2021-07-14 11:20:37 +03:00
Timo 5e50c0bfde added logs for dict 2021-07-13 16:34:44 +03:00
Timo Bejan 0851712a10 Pull request #187: Redaction log backend preview remove code duplication from ui
Merge in RED/redaction-service from redaction-log-backend-preview-remove-code-duplication-from-ui to master

* commit '58dd6841d60ad8562ae0aedf3e0aea2889fb8a4c':
  fixed typo
  update dictionary before preview
2021-07-13 14:57:09 +02:00
Timo 58dd6841d6 fixed typo 2021-07-13 15:35:39 +03:00
Timo b42dd58824 update dictionary before preview 2021-07-13 15:18:06 +03:00
Timo Bejan a3b5c8bb4e Pull request #186: Redaction log backend preview remove code duplication from ui
Merge in RED/redaction-service from redaction-log-backend-preview-remove-code-duplication-from-ui to master

* commit '9da43429393a875b82e0ea73dfcd8093bede91c5':
  changed to fonts 3.8 to fix build
  fixed pmd
  handling add to dict requests
  added dates to model classes for manual redactions
2021-07-13 11:48:29 +02:00
Timo 9da4342939 changed to fonts 3.8 to fix build 2021-07-13 12:43:07 +03:00
Timo 2d0a6d4d29 fixed pmd 2021-07-13 11:39:44 +03:00
Timo af46bdca90 handling add to dict requests 2021-07-13 11:35:18 +03:00
Timo 279fdc6985 added dates to model classes for manual redactions 2021-07-13 11:34:08 +03:00
Timo Bejan 88704717d0 Pull request #185: Redaction log backend preview remove code duplication from ui
Merge in RED/redaction-service from redaction-log-backend-preview-remove-code-duplication-from-ui to master

* commit '3517841d24bc69028391043157d9fcf142600ddf':
  positions for dict entries
  added some logging
  added some logging
2021-07-12 11:17:01 +02:00
Timo 3517841d24 positions for dict entries 2021-07-12 11:43:24 +03:00
Timo 79660f1623 added some logging 2021-07-12 11:18:13 +03:00
Timo f713ea2655 added some logging 2021-07-12 11:16:48 +03:00
Timo Bejan 80c68d6278 Pull request #184: fixed dictionary add corner case
Merge in RED/redaction-service from redaction-log-backend-preview-remove-code-duplication-from-ui to master

* commit 'cc1c3122bb3a4704a8ca1ff858a35f335d7d058b':
  fixed dictionary add  corner case
2021-07-12 10:06:27 +02:00
Timo cc1c3122bb fixed dictionary add corner case 2021-07-12 10:44:42 +03:00
Timo Bejan 6eb6455247 Pull request #183: added dictionary entries
Merge in RED/redaction-service from redaction-log-backend-preview-remove-code-duplication-from-ui to master

* commit '6741b8a596fcb7a014fdbca371329f1cf46d1fd7':
  added dictionary entries
2021-07-12 09:40:36 +02:00
Timo 6741b8a596 added dictionary entries 2021-07-12 10:33:30 +03:00
Dominique Eiflaender e3b8022b54 Pull request #182: RED-1755: Fixed hasHints flag at excluded pages
Merge in RED/redaction-service from RED-1755 to master

* commit 'abb48d46f95ab218c790dece094a44b8e9ccf86c':
  RED-1755: Fixed hasHints flag at excluded pages
2021-07-08 11:35:48 +02:00
Dominique Eifländer abb48d46f9 RED-1755: Fixed hasHints flag at excluded pages 2021-07-08 11:31:27 +02:00
Timo Bejan 6a193d8fa2 Pull request #181: added a preview method that allows us to see how the redaction-log will look like after analysis, this is useful for the UI since we do no longer need to duplicate this code in the UI
Merge in RED/redaction-service from redaction-log-backend-preview-remove-code-duplication-from-ui to master

* commit '9225b9959ded9768c32ed5e23b50e2428117952f':
  updated platform dep version and fixed pmd issue
  added a preview method that allows us to see how the redaction-log will look like after analysis, this is useful for the UI since we do no longer need to duplicate this code in the UI
2021-07-07 22:21:13 +02:00
Timo 9225b9959d updated platform dep version and fixed pmd issue 2021-07-07 23:17:03 +03:00
Timo c36a3813c4 added a preview method that allows us to see how the redaction-log will look like after analysis, this is useful for the UI since we do no longer need to duplicate this code in the UI 2021-07-07 23:05:49 +03:00
Dominique Eiflaender 4efe70f2a9 Pull request #180: RED-809: Added flag to AnalysisResult to see if a reanalysis or normal analysis was performed
Merge in RED/redaction-service from RED-809 to master

* commit '041a3c87ae908fb8e127d4719aa421cbf6c3621e':
  RED-809: Added flag to AnalysisResult to see if a reanalysis or normal analysis was performed
2021-07-05 14:40:00 +02:00
Dominique Eifländer 041a3c87ae RED-809: Added flag to AnalysisResult to see if a reanalysis or normal analysis was performed 2021-07-05 14:29:04 +02:00
Kresnadi Budisantoso fa47da1aed Pull request #179: RED-1728: Do not show isHint flag if only false_positive entries are included in redactionlog
Merge in RED/redaction-service from RED-1728 to master

* commit '24ed2498ea1be2fc4a4daeda81c9a5371e8ad7ce':
  RED-1728: Do not show isHint flag if only false_positive entries are included in redactionlog
2021-07-01 15:49:20 +02:00
Dominique Eifländer 24ed2498ea RED-1728: Do not show isHint flag if only false_positive entries are included in redactionlog 2021-07-01 09:16:32 +02:00
Dominique Eiflaender 4c2eda02cc Pull request #178: RED-1445: Enabled to use file attributes in rules
Merge in RED/redaction-service from RED-1445 to master

* commit '6ae6d467fc5fec4b385cde1c70bae7a21143342f':
  RED-1445: Enabled to use file attributes in rules
2021-06-29 10:29:17 +02:00
Dominique Eifländer 6ae6d467fc RED-1445: Enabled to use file attributes in rules 2021-06-29 10:24:51 +02:00
Dominique Eiflaender 19680668ed Pull request #177: RED-1637: Fixed hasImages flag
Merge in RED/redaction-service from RED-1637 to master

* commit '5d5b3529cd8e45493cc91df3cb8b1f2a3ba14b4e':
  RED-1637: Fixed hasImages flag
2021-06-25 11:18:06 +02:00
Dominique Eifländer 5d5b3529cd RED-1637: Fixed hasImages flag 2021-06-25 10:57:20 +02:00
38 changed files with 870 additions and 732 deletions
@@ -13,6 +13,6 @@ RUN apt-get update \
wget cabextract xfonts-utils fonts-liberation \
&& rm -rf /var/lib/apt/lists/*
RUN curl http://ftp.br.debian.org/debian/pool/contrib/m/msttcorefonts/ttf-mscorefonts-installer_3.7_all.deb -o /tmp/ttf-mscorefonts-installer_3.7_all.deb \
&& dpkg -i /tmp/ttf-mscorefonts-installer_3.7_all.deb \
&& rm /tmp/ttf-mscorefonts-installer_3.7_all.deb \
RUN curl http://ftp.br.debian.org/debian/pool/contrib/m/msttcorefonts/ttf-mscorefonts-installer_3.8_all.deb -o /tmp/ttf-mscorefonts-installer_3.8_all.deb \
&& dpkg -i /tmp/ttf-mscorefonts-installer_3.8_all.deb \
&& rm /tmp/ttf-mscorefonts-installer_3.8_all.deb \
+2 -2
View File
@@ -5,7 +5,7 @@
<parent>
<artifactId>platform-dependency</artifactId>
<groupId>com.iqser.red</groupId>
<version>1.1.2</version>
<version>1.1.3</version>
</parent>
<modelVersion>4.0.0</modelVersion>
@@ -32,7 +32,7 @@
<dependency>
<groupId>com.iqser.red</groupId>
<artifactId>platform-commons-dependency</artifactId>
<version>1.3.1</version>
<version>1.3.6</version>
<scope>import</scope>
<type>pom</type>
</dependency>
@@ -6,6 +6,9 @@ import lombok.Data;
import lombok.NoArgsConstructor;
import java.time.OffsetDateTime;
import java.util.ArrayList;
import java.util.HashSet;
import java.util.List;
import java.util.Set;
@Data
@@ -20,7 +23,14 @@ public class AnalyzeRequest {
private boolean reanalyseOnlyIfPossible;
private ManualRedactions manualRedactions;
private OffsetDateTime lastProcessed;
private Set<Integer> excludedPages;
@Builder.Default
private Set<Integer> excludedPages = new HashSet<>();
@Builder.Default
private Set<Integer> sectionsToReanalyse = new HashSet<>();
@Builder.Default
private List<FileAttribute> fileAttributes = new ArrayList<>();
}
@@ -15,16 +15,16 @@ public class AnalyzeResult {
private String fileId;
private long duration;
private int numberOfPages;
private boolean hasHints;
private boolean hasRequests;
private boolean hasRedactions;
private boolean hasImages;
private boolean hasUpdates;
private long dictionaryVersion;
private long dossierDictionaryVersion;
private long rulesVersion;
private long legalBasisVersion;
private boolean wasReanalyzed;
private int analysisVersion;
}
@@ -0,0 +1,19 @@
package com.iqser.red.service.redaction.v1.model;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
@Data
@Builder
@NoArgsConstructor
@AllArgsConstructor
public class FileAttribute {
private String id;
private String label;
private String placeholder;
private String value;
}
@@ -5,6 +5,8 @@ import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
import java.time.OffsetDateTime;
@Data
@Builder
@AllArgsConstructor
@@ -16,4 +18,8 @@ public class IdRemoval {
private Status status;
private boolean removeFromDictionary;
}
private OffsetDateTime requestDate;
private OffsetDateTime processedDate;
private OffsetDateTime softDeletedTime;
}
@@ -5,6 +5,8 @@ import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
import java.time.OffsetDateTime;
@Data
@Builder
@AllArgsConstructor
@@ -16,4 +18,8 @@ public class ManualForceRedact {
private Status status;
private String legalBasis;
}
private OffsetDateTime requestDate;
private OffsetDateTime processedDate;
private OffsetDateTime softDeletedTime;
}
@@ -5,6 +5,8 @@ import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
import java.time.OffsetDateTime;
@Data
@Builder
@AllArgsConstructor
@@ -15,7 +17,9 @@ public class ManualImageRecategorization {
private String user;
private Status status;
private String type;
private String legalBasis;
private boolean redacted;
}
private OffsetDateTime requestDate;
private OffsetDateTime processedDate;
private OffsetDateTime softDeletedTime;
}
@@ -5,6 +5,8 @@ import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
import java.time.OffsetDateTime;
@Data
@Builder
@AllArgsConstructor
@@ -16,4 +18,8 @@ public class ManualLegalBasisChange {
private Status status;
private String legalBasis;
}
private OffsetDateTime requestDate;
private OffsetDateTime processedDate;
private OffsetDateTime softDeletedTime;
}
@@ -5,6 +5,7 @@ import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
import java.time.OffsetDateTime;
import java.util.ArrayList;
import java.util.List;
@@ -22,11 +23,12 @@ public class ManualRedactionEntry {
private String legalBasis;
private List<Rectangle> positions = new ArrayList<>();
private Status status;
private boolean addToDictionary;
private String section;
private int sectionNumber;
private boolean addToDossierDictionary;
private OffsetDateTime requestDate;
private OffsetDateTime processedDate;
private OffsetDateTime softDeletedTime;
}
@@ -10,6 +10,13 @@ import java.util.List;
@AllArgsConstructor
public class RedactionLog {
/**
* Version 0 Redaction Logs have manual redactions merged inside them
* Version 1 Redaction Logs only contain system ( rule/dictionary ) redactions. Manual Redactions are merged in at runtime.
*/
private long analysisVersion;
private List<RedactionLogEntry> redactionLogEntry;
private List<LegalBasisMapping> legalBasis;
@@ -9,6 +9,8 @@ import lombok.NoArgsConstructor;
import java.util.ArrayList;
import java.util.List;
@Data
@Builder
@NoArgsConstructor
@@ -34,6 +36,7 @@ public class RedactionLogEntry {
private boolean manual;
private Status status;
private ManualRedactionType manualRedactionType;
private String manualRedactionUserId;
private boolean isDictionaryEntry;
private String textBefore;
@@ -46,6 +49,7 @@ public class RedactionLogEntry {
private int endOffset;
private boolean isImage;
private boolean imageHasTransparency;
private boolean isDossierDictionaryEntry;
@@ -1,5 +1,8 @@
package com.iqser.red.service.redaction.v1.model;
import java.util.HashSet;
import java.util.Set;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
@@ -15,4 +18,6 @@ public class RedactionRequest {
private String fileId;
private String dossierTemplateId;
private ManualRedactions manualRedactions;
@Builder.Default
private Set<Integer> excludedPages = new HashSet<>();
}
@@ -30,4 +30,5 @@ public class SectionRectangle {
private int numberOfParts;
private List<CellRectangle> tableCells;
}
@@ -8,12 +8,6 @@ import org.springframework.web.bind.annotation.RequestBody;
public interface RedactionResource {
String SERVICE_NAME = "redaction-service-v1";
String RULE_SET_PARAMETER_NAME = "dossierTemplateId";
String RULE_SET_PATH_VARIABLE = "/{" + RULE_SET_PARAMETER_NAME + "}";
@PostMapping(value = "/annotate", produces = MediaType.APPLICATION_JSON_VALUE, consumes = MediaType.APPLICATION_JSON_VALUE)
AnnotateResponse annotate(@RequestBody AnnotateRequest annotateRequest);
@@ -26,10 +20,10 @@ public interface RedactionResource {
@PostMapping(value = "/debug/htmlTables", produces = MediaType.APPLICATION_JSON_VALUE, consumes = MediaType.APPLICATION_JSON_VALUE)
RedactionResult htmlTables(@RequestBody RedactionRequest redactionRequest);
@PostMapping(value = "/rules/update" + RULE_SET_PATH_VARIABLE, consumes = MediaType.APPLICATION_JSON_VALUE)
void updateRules(@PathVariable(RULE_SET_PARAMETER_NAME) String dossierTemplateId);
@PostMapping(value = "/rules/test", consumes = MediaType.APPLICATION_JSON_VALUE)
void testRules(@RequestBody String rules);
@PostMapping(value = "/redaction-log/preview", consumes = MediaType.APPLICATION_JSON_VALUE)
RedactionLog getRedactionLog(@RequestBody RedactionRequest redactionRequest);
}
@@ -1,10 +1,7 @@
package com.iqser.red.service.redaction.v1.server.controller;
import com.iqser.red.service.file.management.v1.api.model.FileType;
import com.iqser.red.service.redaction.v1.model.AnnotateRequest;
import com.iqser.red.service.redaction.v1.model.AnnotateResponse;
import com.iqser.red.service.redaction.v1.model.RedactionRequest;
import com.iqser.red.service.redaction.v1.model.RedactionResult;
import com.iqser.red.service.redaction.v1.model.*;
import com.iqser.red.service.redaction.v1.resources.RedactionResource;
import com.iqser.red.service.redaction.v1.server.classification.model.Document;
import com.iqser.red.service.redaction.v1.server.classification.model.Page;
@@ -12,7 +9,9 @@ import com.iqser.red.service.redaction.v1.server.exception.RedactionException;
import com.iqser.red.service.redaction.v1.server.redaction.service.AnnotationService;
import com.iqser.red.service.redaction.v1.server.redaction.service.DictionaryService;
import com.iqser.red.service.redaction.v1.server.redaction.service.DroolsExecutionService;
import com.iqser.red.service.redaction.v1.server.redaction.service.RedactionLogMergeService;
import com.iqser.red.service.redaction.v1.server.segmentation.PdfSegmentationService;
import com.iqser.red.service.redaction.v1.server.settings.RedactionServiceSettings;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import com.iqser.red.service.redaction.v1.server.tableextraction.model.AbstractTextContainer;
import com.iqser.red.service.redaction.v1.server.tableextraction.model.Table;
@@ -39,7 +38,7 @@ public class RedactionController implements RedactionResource {
private final AnnotationService annotationService;
private final PdfSegmentationService pdfSegmentationService;
private final RedactionStorageService redactionStorageService;
private final RedactionLogMergeService redactionLogMergeService;
public AnnotateResponse annotate(@RequestBody AnnotateRequest annotateRequest) {
@@ -141,20 +140,28 @@ public class RedactionController implements RedactionResource {
}
@Override
public void updateRules(@PathVariable(RULE_SET_PARAMETER_NAME) String dossierTemplateId) {
droolsExecutionService.updateRules(dossierTemplateId);
}
@Override
public void testRules(@RequestBody String rules) {
droolsExecutionService.testRules(rules);
}
@Override
public RedactionLog getRedactionLog(RedactionRequest redactionRequest) {
log.info("Requested preview for: {}", redactionRequest);
dictionaryService.updateDictionary(redactionRequest.getDossierTemplateId(), redactionRequest.getDossierId());
var redactionLog = redactionStorageService.getRedactionLog(redactionRequest.getDossierId(), redactionRequest.getFileId());
log.info("Loaded redaction log with computationalVersion: {}", redactionLog.getAnalysisVersion());
if (redactionLog.getAnalysisVersion() == 0) {
// old redaction logs are returned directly
return redactionLog;
} else {
return redactionLogMergeService.mergeRedactionLogData(redactionLog, redactionRequest.getDossierTemplateId(), redactionRequest.getManualRedactions(), redactionRequest.getExcludedPages());
}
}
private RedactionResult convert(PDDocument document, int numberOfPages) throws IOException {
@@ -189,18 +189,16 @@ public class PDFLinesTextStripper extends PDFTextStripper {
COSName objectName = (COSName) arguments.get(0);
PDXObject xobject = getResources().getXObject(objectName);
if (xobject instanceof PDImageXObject) {
PDImageXObject pdfImage = (PDImageXObject) xobject;
PDImageXObject image = (PDImageXObject)xobject;
Matrix ctmNew = getGraphicsState().getCurrentTransformationMatrix();
Rectangle2D imageBounds = calculateImagePosition(pdfImage);
Rectangle2D rect = new Rectangle2D.Float((float) imageBounds.getX(), (float) imageBounds.getY(), (float) imageBounds
.getWidth(), (float) imageBounds.getHeight());
Rectangle2D rect = new Rectangle2D.Float(ctmNew.getTranslateX(), ctmNew.getTranslateY(), ctmNew.getScaleX(), ctmNew.getScaleY());
// Memory Hack - sofReference kills me
FieldUtils.writeField(pdfImage, "cachedImageSubsampling", -1, true);
FieldUtils.writeField(image, "cachedImageSubsampling", -1, true);
if (rect.getHeight() > 2 && rect.getWidth() > 2) {
this.images.add(new PdfImage(pdfImage.getImage(), rect, pageNumber));
this.images.add(new PdfImage(image.getImage(), rect, pageNumber, image.getImage().getColorModel().hasAlpha()));
}
}
} catch (Exception e) {
@@ -209,21 +207,6 @@ public class PDFLinesTextStripper extends PDFTextStripper {
}
private Rectangle2D calculateImagePosition(PDImageXObject pdfImage) throws IOException {
Matrix ctm = getGraphicsState().getCurrentTransformationMatrix();
Rectangle2D imageBounds = pdfImage.getImage().getRaster().getBounds();
AffineTransform imageTransform = new AffineTransform(ctm.createAffineTransform());
imageTransform.scale(1.0 / pdfImage.getWidth(), -1.0 / pdfImage.getHeight());
imageTransform.translate(0, -pdfImage.getHeight());
AffineTransform pageTransform = new AffineTransform();
pageTransform.concatenate(imageTransform);
return pageTransform.createTransformedShape(imageBounds).getBounds2D();
}
private float floatValue(COSBase value) {
@@ -9,7 +9,7 @@ import java.util.List;
@Data
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Entity {
public class Entity implements ReasonHolder {
private final String word;
@@ -9,7 +9,7 @@ import lombok.NoArgsConstructor;
@Builder
@NoArgsConstructor
@AllArgsConstructor
public class Image {
public class Image implements ReasonHolder {
private String type;
private RedRectangle2D position;
@@ -20,5 +20,6 @@ public class Image {
private int sectionNumber;
private String section;
private int page;
private boolean hasTransparency;
}
@@ -18,14 +18,16 @@ public class PdfImage {
private RedRectangle2D position;
private ImageType imageType;
private boolean isAppendedToParagraph;
private boolean hasTransparency;
@NonNull
private int page;
public PdfImage(BufferedImage image, Rectangle2D position, int page) {
public PdfImage(BufferedImage image, Rectangle2D position, int page, boolean hasTransparency) {
this.image = image;
this.position = new RedRectangle2D(position.getX(), position.getY(), position.getWidth(), position.getHeight());
this.page = page;
this.hasTransparency = hasTransparency;
}
}
@@ -0,0 +1,14 @@
package com.iqser.red.service.redaction.v1.server.redaction.model;
public interface ReasonHolder {
String getRedactionReason();
void setRedactionReason(String reason);
boolean isRedaction();
void setRedaction(boolean value);
}
@@ -1,5 +1,6 @@
package com.iqser.red.service.redaction.v1.server.redaction.model;
import com.iqser.red.service.redaction.v1.model.FileAttribute;
import com.iqser.red.service.redaction.v1.server.classification.model.TextBlock;
import com.iqser.red.service.redaction.v1.server.redaction.utils.EntitySearchUtils;
import com.iqser.red.service.redaction.v1.server.redaction.utils.Patterns;
@@ -8,9 +9,11 @@ import lombok.Data;
import lombok.extern.slf4j.Slf4j;
import org.apache.commons.lang3.StringUtils;
import java.util.ArrayList;
import java.util.Collection;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.regex.Matcher;
@@ -52,6 +55,35 @@ public class Section {
@Builder.Default
private Set<Image> images = new HashSet<>();
@Builder.Default
private List<FileAttribute> fileAttributes = new ArrayList<>();
public boolean fileAttributeByIdEquals(String id, String value){
return fileAttributes != null && fileAttributes.stream().filter(attribute -> id.equals(attribute.getId()) && value.equals(attribute.getValue())).findFirst().isPresent();
}
public boolean fileAttributeByPlaceholderEquals(String placeholder, String value){
return fileAttributes != null && fileAttributes.stream().filter(attribute -> placeholder.equals(attribute.getPlaceholder()) && value.equals(attribute.getValue())).findFirst().isPresent();
}
public boolean fileAttributeByLabelEquals(String label, String value){
return fileAttributes != null && fileAttributes.stream().filter(attribute -> label.equals(attribute.getLabel()) && value.equals(attribute.getValue())).findFirst().isPresent();
}
public boolean fileAttributeByIdEqualsIgnoreCase(String id, String value){
return fileAttributes != null && fileAttributes.stream().filter(attribute -> id.equals(attribute.getId()) && value.equalsIgnoreCase(attribute.getValue())).findFirst().isPresent();
}
public boolean fileAttributeByPlaceholderEqualsIgnoreCase(String placeholder, String value){
return fileAttributes != null && fileAttributes.stream().filter(attribute -> placeholder.equals(attribute.getPlaceholder()) && value.equalsIgnoreCase(attribute.getValue())).findFirst().isPresent();
}
public boolean fileAttributeByLabelEqualsIgnoreCase(String label, String value){
return fileAttributes != null && fileAttributes.stream().filter(attribute -> label.equals(attribute.getLabel()) && value.equalsIgnoreCase(attribute.getValue())).findFirst().isPresent();
}
public boolean rowEquals(String headerName, String value) {
@@ -4,49 +4,40 @@ import com.iqser.red.service.redaction.v1.model.AnalyzeResult;
import com.iqser.red.service.redaction.v1.model.RedactionChangeLog;
import com.iqser.red.service.redaction.v1.model.RedactionLog;
import com.iqser.red.service.redaction.v1.model.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.server.settings.RedactionServiceSettings;
import lombok.NoArgsConstructor;
import lombok.RequiredArgsConstructor;
import org.springframework.stereotype.Service;
@Service
@RequiredArgsConstructor
public class AnalyzeResponseService {
public AnalyzeResult createAnalyzeResponse(String dossierId, String fileId, long duration, int pageCount, RedactionLog redactionLog, RedactionChangeLog redactionChangeLog) {
boolean hasHints = redactionLog.getRedactionLogEntry().stream().anyMatch(RedactionLogEntry::isHint);
private final RedactionServiceSettings redactionServiceSettings;
boolean hasRequests = redactionLog.getRedactionLogEntry()
.stream()
.filter(entry -> !entry.isExcluded())
.anyMatch(entry -> entry.isManual() && entry.getStatus()
.equals(com.iqser.red.service.redaction.v1.model.Status.REQUESTED));
public AnalyzeResult createAnalyzeResponse(String dossierId, String fileId, long duration, int pageCount,
RedactionLog redactionLog, RedactionChangeLog redactionChangeLog) {
boolean hasRedactions = redactionLog.getRedactionLogEntry()
.stream()
.filter(entry -> !entry.isExcluded())
.anyMatch(entry -> entry.isRedacted() && !entry.isManual() || entry.isManual() && entry.getStatus()
.equals(com.iqser.red.service.redaction.v1.model.Status.APPROVED));
boolean hasImages = redactionLog.getRedactionLogEntry()
.stream()
.filter(entry -> !entry.isExcluded())
.anyMatch(entry -> entry.isHint() && entry.getType().equals("image"));
boolean hasUpdates = redactionChangeLog != null && redactionChangeLog.getRedactionLogEntry() != null && !redactionChangeLog
.getRedactionLogEntry()
.isEmpty() && redactionChangeLog.getRedactionLogEntry().stream().anyMatch(entry -> !entry.getType().equals("false_positive"));
.isEmpty() && redactionChangeLog.getRedactionLogEntry()
.stream()
.anyMatch(entry -> !entry.getType().equals("false_positive"));
return AnalyzeResult.builder()
.dossierId(dossierId)
.fileId(fileId)
.duration(duration)
.numberOfPages(pageCount)
.hasHints(hasHints)
.hasRedactions(hasRedactions)
.hasRequests(hasRequests)
.hasImages(hasImages)
.hasUpdates(hasUpdates)
.analysisVersion(redactionServiceSettings.getAnalysisVersion())
.rulesVersion(redactionLog.getRulesVersion())
.dictionaryVersion(redactionLog.getDictionaryVersion())
.legalBasisVersion(redactionLog.getLegalBasisVersion())
.dossierDictionaryVersion(redactionLog.getDossierDictionaryVersion())
.build();
}
}
@@ -33,6 +33,7 @@ public class DictionaryService {
public DictionaryVersion updateDictionary(String dossierTemplateId, String dossierId) {
log.info("Updating dictionary data for: {} / {}", dossierTemplateId, dossierId);
long dossierTemplateDictionaryVersion = dictionaryClient.getVersion(dossierTemplateId, GLOBAL_DOSSIER);
var dossierTemplateDictionary = dictionariesByDossierTemplate.get(dossierTemplateId);
if (dossierTemplateDictionary == null || dossierTemplateDictionaryVersion > dossierTemplateDictionary.getDictionaryVersion()) {
@@ -163,6 +164,7 @@ public class DictionaryService {
public float[] getColor(String type, String dossierTemplateId) {
log.info("requested : {} / {}",type,dossierTemplateId);
DictionaryModel model = dictionariesByDossierTemplate.get(dossierTemplateId).getLocalAccessMap().get(type);
if (model != null) {
return model.getColor();
@@ -210,13 +212,13 @@ public class DictionaryService {
dossierDictionaryVersion = dossierRepresentation.getDictionaryVersion();
}
return new Dictionary(copy, DictionaryVersion.builder().dossierTemplateVersion(dossierTemplateRepresentation.getDictionaryVersion()).dossierVersion(dossierDictionaryVersion).build());
return new Dictionary(copy.stream().sorted(Comparator.comparingInt(DictionaryModel::getRank).reversed()).collect(Collectors.toList()), DictionaryVersion.builder().dossierTemplateVersion(dossierTemplateRepresentation.getDictionaryVersion()).dossierVersion(dossierDictionaryVersion).build());
}
public float[] getRequestRemoveColor(String dossierTemplateId) {
return dictionariesByDossierTemplate.get(dossierTemplateId).getRequestAddColor();
return dictionariesByDossierTemplate.get(dossierTemplateId).getRequestRemoveColor();
}
@@ -63,7 +63,7 @@ public class DroolsExecutionService {
rulesVersion = -1L;
}
if (version > rulesVersion.longValue()) {
if (version > rulesVersion) {
rulesVersionPerDossierTemplateId.put(dossierTemplateId, version);
return createOrUpdateKieContainer(dossierTemplateId);
}
@@ -128,7 +128,7 @@ public class DroolsExecutionService {
if (rulesVersion == null) {
return -1;
}
return rulesVersion.longValue();
return rulesVersion;
}
}
@@ -1,14 +1,11 @@
package com.iqser.red.service.redaction.v1.server.redaction.service;
import com.iqser.red.service.redaction.v1.model.ManualRedactionEntry;
import com.iqser.red.service.redaction.v1.model.ManualRedactions;
import com.iqser.red.service.redaction.v1.model.Point;
import com.iqser.red.service.redaction.v1.model.Rectangle;
import com.iqser.red.service.redaction.v1.model.SectionArea;
import com.iqser.red.service.redaction.v1.model.*;
import com.iqser.red.service.redaction.v1.server.classification.model.*;
import com.iqser.red.service.redaction.v1.server.redaction.model.Dictionary;
import com.iqser.red.service.redaction.v1.server.redaction.model.*;
import com.iqser.red.service.redaction.v1.server.redaction.utils.EntitySearchUtils;
import com.iqser.red.service.redaction.v1.server.redaction.utils.IdBuilder;
import com.iqser.red.service.redaction.v1.server.tableextraction.model.Cell;
import com.iqser.red.service.redaction.v1.server.tableextraction.model.Table;
import lombok.RequiredArgsConstructor;
@@ -33,7 +30,8 @@ public class EntityRedactionService {
private final SurroundingWordsService surroundingWordsService;
public void processDocument(Document classifiedDoc, String dossierTemplateId, ManualRedactions manualRedactions, String dossierId) {
public void processDocument(Document classifiedDoc, String dossierTemplateId, ManualRedactions manualRedactions,
String dossierId, List<FileAttribute> fileAttributes) {
dictionaryService.updateDictionary(dossierTemplateId, dossierId);
KieContainer container = droolsExecutionService.updateRules(dossierTemplateId);
@@ -41,39 +39,17 @@ public class EntityRedactionService {
Dictionary dictionary = dictionaryService.getDeepCopyDictionary(dossierTemplateId, dossierId);
Set<Entity> documentEntities = new HashSet<>(findEntities(classifiedDoc, container, manualRedactions, dictionary, false, null));
Set<Entity> documentEntities = new HashSet<>(findEntities(classifiedDoc, container, manualRedactions, dictionary, false, null, fileAttributes));
if (dictionary.hasLocalEntries()) {
Map<Integer, Set<Entity>> hintsPerSectionNumber = new HashMap<>();
documentEntities.stream().forEach(entity -> {
if (dictionary.isHint(entity.getType()) && entity.isDictionaryEntry()) {
hintsPerSectionNumber.computeIfAbsent(entity.getSectionNumber(), (x) -> new HashSet<>())
.add(entity);
}
});
Set<Entity> foundByLocal = findEntities(classifiedDoc, container, manualRedactions, dictionary, true, hintsPerSectionNumber);
Map<Integer, Set<Entity>> hintsPerSectionNumber = getHintsPerSection(documentEntities, dictionary);
Set<Entity> foundByLocal = findEntities(classifiedDoc, container, manualRedactions, dictionary, true, hintsPerSectionNumber, fileAttributes);
EntitySearchUtils.addEntitiesWithHigherRank(documentEntities, foundByLocal, dictionary);
EntitySearchUtils.removeEntitiesContainedInLarger(documentEntities);
}
for (Entity entity : documentEntities) {
Map<Integer, List<EntityPositionSequence>> sequenceOnPage = new HashMap<>();
for (EntityPositionSequence entityPositionSequence : entity.getPositionSequences()) {
sequenceOnPage.computeIfAbsent(entityPositionSequence.getPageNumber(), (x) -> new ArrayList<>())
.add(entityPositionSequence);
}
for (Map.Entry<Integer, List<EntityPositionSequence>> entry : sequenceOnPage.entrySet()) {
classifiedDoc.getEntities()
.computeIfAbsent(entry.getKey(), (x) -> new ArrayList<>())
.add(new Entity(entity.getWord(), entity.getType(), entity.isRedaction(), entity.getRedactionReason(), entry
.getValue(), entity.getHeadline(), entity.getMatchedRule(), entity.getSectionNumber(), entity
.getLegalBasis(), entity.isDictionaryEntry(), entity.getTextBefore(), entity.getTextAfter(), entity
.getStart(), entity.getEnd(), entity.isDossierDictionaryEntry()));
}
}
classifiedDoc.setEntities(convertToEnititesPerPage(documentEntities));
dictionaryService.updateExternalDictionary(dictionary, dossierTemplateId);
@@ -82,9 +58,43 @@ public class EntityRedactionService {
}
public Map<Integer, List<Entity>> convertToEnititesPerPage(Set<Entity> entities){
Map<Integer, List<Entity>> entitiesPerPage = new HashMap<>();
for (Entity entity : entities) {
Map<Integer, List<EntityPositionSequence>> sequenceOnPage = new HashMap<>();
for (EntityPositionSequence entityPositionSequence : entity.getPositionSequences()) {
sequenceOnPage.computeIfAbsent(entityPositionSequence.getPageNumber(), (x) -> new ArrayList<>())
.add(entityPositionSequence);
}
for (Map.Entry<Integer, List<EntityPositionSequence>> entry : sequenceOnPage.entrySet()) {
entitiesPerPage
.computeIfAbsent(entry.getKey(), (x) -> new ArrayList<>())
.add(new Entity(entity.getWord(), entity.getType(), entity.isRedaction(), entity.getRedactionReason(), entry
.getValue(), entity.getHeadline(), entity.getMatchedRule(), entity.getSectionNumber(), entity
.getLegalBasis(), entity.isDictionaryEntry(), entity.getTextBefore(), entity.getTextAfter(), entity
.getStart(), entity.getEnd(), entity.isDossierDictionaryEntry()));
}
}
return entitiesPerPage;
}
public Map<Integer, Set<Entity>> getHintsPerSection(Set<Entity> entities, Dictionary dictionary){
Map<Integer, Set<Entity>> hintsPerSectionNumber = new HashMap<>();
entities.stream().forEach(entity -> {
if (dictionary.isHint(entity.getType()) && entity.isDictionaryEntry()) {
hintsPerSectionNumber.computeIfAbsent(entity.getSectionNumber(), (x) -> new HashSet<>())
.add(entity);
}
});
return hintsPerSectionNumber;
}
private Set<Entity> findEntities(Document classifiedDoc, KieContainer kieContainer,
ManualRedactions manualRedactions, Dictionary dictionary, boolean local,
Map<Integer, Set<Entity>> hintsPerSectionNumber) {
Map<Integer, Set<Entity>> hintsPerSectionNumber,
List<FileAttribute> fileAttributes) {
Set<Entity> documentEntities = new HashSet<>();
@@ -95,76 +105,80 @@ public class EntityRedactionService {
List<Table> tables = paragraph.getTables();
for (Table table : tables) {
if (table.getColCount() == 2) {
sectionSearchableTextPairs.addAll(processTableAsOneText(classifiedDoc, table, manualRedactions, sectionNumber, dictionary, local, hintsPerSectionNumber));
sectionSearchableTextPairs.addAll(processTableAsOneText(classifiedDoc, table, sectionNumber, dictionary, local, hintsPerSectionNumber, fileAttributes));
} else {
sectionSearchableTextPairs.addAll(processTablePerRow(classifiedDoc, table, manualRedactions, sectionNumber, dictionary, local, hintsPerSectionNumber));
sectionSearchableTextPairs.addAll(processTablePerRow(classifiedDoc, table, sectionNumber, dictionary, local, hintsPerSectionNumber, fileAttributes));
}
sectionNumber.incrementAndGet();
}
sectionSearchableTextPairs.add(processText(classifiedDoc, paragraph.getSearchableText(), paragraph.getTextBlocks(), paragraph
.getHeadline(), manualRedactions, sectionNumber, dictionary, local, hintsPerSectionNumber, paragraph
.getImages()));
.getImages(), fileAttributes));
sectionNumber.incrementAndGet();
}
for (Header header : classifiedDoc.getHeaders()) {
sectionSearchableTextPairs.add(processText(classifiedDoc, header.getSearchableText(), header.getTextBlocks(), "Header", manualRedactions, sectionNumber, dictionary, local, hintsPerSectionNumber, new ArrayList<>()));
sectionSearchableTextPairs.add(processText(classifiedDoc, header.getSearchableText(), header.getTextBlocks(), "Header", manualRedactions, sectionNumber, dictionary, local, hintsPerSectionNumber, new ArrayList<>(), fileAttributes));
sectionNumber.incrementAndGet();
}
for (Footer footer : classifiedDoc.getFooters()) {
sectionSearchableTextPairs.add(processText(classifiedDoc, footer.getSearchableText(), footer.getTextBlocks(), "Footer", manualRedactions, sectionNumber, dictionary, local, hintsPerSectionNumber, new ArrayList<>()));
sectionSearchableTextPairs.add(processText(classifiedDoc, footer.getSearchableText(), footer.getTextBlocks(), "Footer", manualRedactions, sectionNumber, dictionary, local, hintsPerSectionNumber, new ArrayList<>(), fileAttributes));
sectionNumber.incrementAndGet();
}
for (UnclassifiedText unclassifiedText : classifiedDoc.getUnclassifiedTexts()) {
sectionSearchableTextPairs.add(processText(classifiedDoc, unclassifiedText.getSearchableText(), unclassifiedText
.getTextBlocks(), "", manualRedactions, sectionNumber, dictionary, local, hintsPerSectionNumber, new ArrayList<>()));
.getTextBlocks(), "", manualRedactions, sectionNumber, dictionary, local, hintsPerSectionNumber, new ArrayList<>(), fileAttributes));
sectionNumber.incrementAndGet();
}
sectionSearchableTextPairs.forEach(sectionSearchableTextPair -> {
Section analysedRowSection = droolsExecutionService.executeRules(kieContainer, sectionSearchableTextPair.getSection());
documentEntities.addAll(analysedRowSection.getEntities());
Section analysedSection = droolsExecutionService.executeRules(kieContainer, sectionSearchableTextPair.getSection());
documentEntities.addAll(analysedSection.getEntities());
for (Image image : analysedRowSection.getImages()) {
for (Image image : analysedSection.getImages()) {
classifiedDoc.getImages().computeIfAbsent(image.getPage(), (a) -> new HashSet<>()).add(image);
}
analysedRowSection.getLocalDictionaryAdds().keySet().forEach(key -> {
if (dictionary.isRecommendation(key)) {
analysedRowSection.getLocalDictionaryAdds().get(key).forEach(value -> {
if (!dictionary.containsValue(key, value)) {
dictionary.getLocalAccessMap().get(key).getLocalEntries().add(value);
}
});
} else {
analysedRowSection.getLocalDictionaryAdds().get(key).forEach(value -> {
if (dictionary.getLocalAccessMap().get(key) == null) {
log.warn("Dictionary {} is null", key);
}
if (dictionary.getLocalAccessMap().get(key).getLocalEntries() == null) {
log.warn("Dictionary {} localEntries is null", key);
}
dictionary.getLocalAccessMap().get(key).getLocalEntries().add(value);
});
}
});
addLocalValuesToDictionary(analysedSection, dictionary);
});
return documentEntities;
}
public void addLocalValuesToDictionary(Section analysedSection, Dictionary dictionary){
analysedSection.getLocalDictionaryAdds().keySet().forEach(key -> {
if (dictionary.isRecommendation(key)) {
analysedSection.getLocalDictionaryAdds().get(key).forEach(value -> {
if (!dictionary.containsValue(key, value)) {
dictionary.getLocalAccessMap().get(key).getLocalEntries().add(value);
}
});
} else {
analysedSection.getLocalDictionaryAdds().get(key).forEach(value -> {
if (dictionary.getLocalAccessMap().get(key) == null) {
log.warn("Dictionary {} is null", key);
}
if (dictionary.getLocalAccessMap().get(key).getLocalEntries() == null) {
log.warn("Dictionary {} localEntries is null", key);
}
dictionary.getLocalAccessMap().get(key).getLocalEntries().add(value);
});
}
});
}
private List<SectionSearchableTextPair> processTablePerRow(Document classifiedDoc, Table table,
ManualRedactions manualRedactions,
AtomicInteger sectionNumber, Dictionary dictionary,
boolean local,
Map<Integer, Set<Entity>> hintsPerSectionNumber) {
Map<Integer, Set<Entity>> hintsPerSectionNumber,
List<FileAttribute> fileAttributes) {
List<SectionSearchableTextPair> sectionSearchableTextPairs = new ArrayList<>();
@@ -189,7 +203,6 @@ public class EntityRedactionService {
sectionText.getSectionAreas().add(sectionArea);
sectionText.getTextBlocks().addAll(cell.getTextBlocks());
addSectionToManualRedactions(cell.getTextBlocks(), manualRedactions, table.getHeadline(), sectionNumber.intValue());
int cellStart = start;
if (!cell.isHeaderCell()) {
@@ -229,6 +242,7 @@ public class EntityRedactionService {
.tabularData(tabularData)
.searchableText(searchableRow)
.dictionary(dictionary)
.fileAttributes(fileAttributes)
.build(), searchableRow));
if (!local) {
@@ -249,10 +263,10 @@ public class EntityRedactionService {
private List<SectionSearchableTextPair> processTableAsOneText(Document classifiedDoc, Table table,
ManualRedactions manualRedactions,
AtomicInteger sectionNumber, Dictionary dictionary,
boolean local,
Map<Integer, Set<Entity>> hintsPerSectionNumber) {
Map<Integer, Set<Entity>> hintsPerSectionNumber,
List<FileAttribute> fileAttributes) {
List<SectionSearchableTextPair> sectionSearchableTextPairs = new ArrayList<>();
SearchableText entireTableText = new SearchableText();
@@ -277,7 +291,6 @@ public class EntityRedactionService {
for (TextBlock textBlock : cell.getTextBlocks()) {
entireTableText.addAll(textBlock.getSequences());
}
addSectionToManualRedactions(cell.getTextBlocks(), manualRedactions, table.getHeadline(), sectionNumber.intValue());
}
}
@@ -296,6 +309,7 @@ public class EntityRedactionService {
.sectionNumber(sectionNumber.intValue())
.searchableText(entireTableText)
.dictionary(dictionary)
.fileAttributes(fileAttributes)
.build(), entireTableText));
if (!local) {
@@ -315,7 +329,7 @@ public class EntityRedactionService {
ManualRedactions manualRedactions, AtomicInteger sectionNumber,
Dictionary dictionary, boolean local,
Map<Integer, Set<Entity>> hintsPerSectionNumber,
List<PdfImage> images) {
List<PdfImage> images, List<FileAttribute> fileAttributes) {
if (!local) {
SectionText sectionText = new SectionText();
@@ -330,13 +344,12 @@ public class EntityRedactionService {
sectionText.setSectionNumber(sectionNumber.intValue());
sectionText.setTable(false);
sectionText.setImages(images.stream()
.map(image -> convert(image, sectionNumber.intValue(), headline))
.map(image -> convertAndRecategorize(image, sectionNumber.intValue(), headline, manualRedactions))
.collect(Collectors.toSet()));
sectionText.setTextBlocks(paragraphTextBlocks);
classifiedDoc.getSectionText().add(sectionText);
}
addSectionToManualRedactions(paragraphTextBlocks, manualRedactions, headline, sectionNumber.intValue());
Set<Entity> entities = findEntities(searchableText, headline, sectionNumber.intValue(), dictionary, local);
surroundingWordsService.addSurroundingText(entities, searchableText, dictionary);
@@ -353,8 +366,9 @@ public class EntityRedactionService {
.searchableText(searchableText)
.dictionary(dictionary)
.images(images.stream()
.map(image -> convert(image, sectionNumber.intValue(), headline))
.map(image -> convertAndRecategorize(image, sectionNumber.intValue(), headline, manualRedactions))
.collect(Collectors.toSet()))
.fileAttributes(fileAttributes)
.build(), searchableText);
}
@@ -371,9 +385,11 @@ public class EntityRedactionService {
String lowercaseInputString = searchableString.toLowerCase();
for (DictionaryModel model : dictionary.getDictionaryModels()) {
if (model.isCaseInsensitive()) {
found.addAll(EntitySearchUtils.find(lowercaseInputString, model.getValues(local), model.getType(), headline, sectionNumber, local, model.isDossierDictionary()));
found.addAll(EntitySearchUtils.find(lowercaseInputString, model.getValues(local), model.getType(), headline, sectionNumber, local, model
.isDossierDictionary()));
} else {
found.addAll(EntitySearchUtils.find(searchableString, model.getValues(local), model.getType(), headline, sectionNumber, local, model.isDossierDictionary()));
found.addAll(EntitySearchUtils.find(searchableString, model.getValues(local), model.getType(), headline, sectionNumber, local, model
.isDossierDictionary()));
}
}
@@ -381,29 +397,9 @@ public class EntityRedactionService {
}
private void addSectionToManualRedactions(List<TextBlock> textBlocks, ManualRedactions manualRedactions,
String section, int sectionNumber) {
private Image convertAndRecategorize(PdfImage pdfImage, int sectionNumber, String headline, ManualRedactions manualRedactions) {
if (manualRedactions == null || manualRedactions.getEntriesToAdd().isEmpty()) {
return;
}
for (TextBlock textBlock : textBlocks) {
for (ManualRedactionEntry manualRedactionEntry : manualRedactions.getEntriesToAdd()) {
for (Rectangle rectangle : manualRedactionEntry.getPositions()) {
if (textBlock.contains(rectangle)) {
manualRedactionEntry.setSection(section);
manualRedactionEntry.setSectionNumber(sectionNumber);
}
}
}
}
}
private Image convert(PdfImage pdfImage, int sectionNumber, String headline) {
return Image.builder()
Image image = Image.builder()
.type(pdfImage.getImageType().equals(ImageType.OTHER) ? "image" : pdfImage.getImageType()
.name()
.toLowerCase(Locale.ROOT))
@@ -411,7 +407,20 @@ public class EntityRedactionService {
.sectionNumber(sectionNumber)
.section(headline)
.page(pdfImage.getPage())
.hasTransparency(pdfImage.isHasTransparency())
.build();
String imageId = IdBuilder.buildId(image.getPosition(), image.getPage());
if (manualRedactions != null && manualRedactions.getImageRecategorizations() != null) {
for (ManualImageRecategorization imageRecategorization : manualRedactions.getImageRecategorizations()) {
if (imageRecategorization.getStatus().equals(Status.APPROVED) && imageRecategorization.getId()
.equals(imageId)) {
image.setType(imageRecategorization.getType());
}
}
}
return image;
}
}
@@ -1,54 +1,32 @@
package com.iqser.red.service.redaction.v1.server.redaction.service;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import java.util.stream.Stream;
import org.kie.api.runtime.KieContainer;
import org.springframework.stereotype.Service;
import org.springframework.web.bind.annotation.RequestBody;
import com.iqser.red.service.file.management.v1.api.model.FileType;
import com.iqser.red.service.redaction.v1.model.AnalyzeRequest;
import com.iqser.red.service.redaction.v1.model.AnalyzeResult;
import com.iqser.red.service.redaction.v1.model.Comment;
import com.iqser.red.service.redaction.v1.model.IdRemoval;
import com.iqser.red.service.redaction.v1.model.ManualForceRedact;
import com.iqser.red.service.redaction.v1.model.ManualImageRecategorization;
import com.iqser.red.service.redaction.v1.model.ManualLegalBasisChange;
import com.iqser.red.service.redaction.v1.model.ManualRedactionEntry;
import com.iqser.red.service.redaction.v1.model.ManualRedactions;
import com.iqser.red.service.redaction.v1.model.Rectangle;
import com.iqser.red.service.redaction.v1.model.RedactionLog;
import com.iqser.red.service.redaction.v1.model.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.model.SectionArea;
import com.iqser.red.service.redaction.v1.model.*;
import com.iqser.red.service.redaction.v1.server.classification.model.Document;
import com.iqser.red.service.redaction.v1.server.classification.model.SectionText;
import com.iqser.red.service.redaction.v1.server.classification.model.Text;
import com.iqser.red.service.redaction.v1.server.client.LegalBasisClient;
import com.iqser.red.service.redaction.v1.server.exception.RedactionException;
import com.iqser.red.service.redaction.v1.server.redaction.model.Dictionary;
import com.iqser.red.service.redaction.v1.server.redaction.model.DictionaryIncrement;
import com.iqser.red.service.redaction.v1.server.redaction.model.DictionaryVersion;
import com.iqser.red.service.redaction.v1.server.redaction.model.Entity;
import com.iqser.red.service.redaction.v1.server.redaction.model.EntityPositionSequence;
import com.iqser.red.service.redaction.v1.server.redaction.model.Image;
import com.iqser.red.service.redaction.v1.server.redaction.model.RedRectangle2D;
import com.iqser.red.service.redaction.v1.server.redaction.model.Section;
import com.iqser.red.service.redaction.v1.server.redaction.model.SectionSearchableTextPair;
import com.iqser.red.service.redaction.v1.server.redaction.model.*;
import com.iqser.red.service.redaction.v1.server.redaction.utils.EntitySearchUtils;
import com.iqser.red.service.redaction.v1.server.redaction.utils.IdBuilder;
import com.iqser.red.service.redaction.v1.server.segmentation.PdfSegmentationService;
import com.iqser.red.service.redaction.v1.server.settings.RedactionServiceSettings;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import lombok.RequiredArgsConstructor;
import lombok.SneakyThrows;
import lombok.extern.slf4j.Slf4j;
import org.kie.api.runtime.KieContainer;
import org.springframework.stereotype.Service;
import org.springframework.web.bind.annotation.RequestBody;
import java.util.*;
import java.util.stream.Collectors;
import java.util.stream.Stream;
@Slf4j
@Service
@RequiredArgsConstructor
@@ -64,6 +42,7 @@ public class ReanalyzeService {
private final RedactionChangeLogService redactionChangeLogService;
private final AnalyzeResponseService analyzeResponseService;
private final LegalBasisClient legalBasisClient;
private final RedactionServiceSettings redactionServiceSettings;
public AnalyzeResult analyze(AnalyzeRequest analyzeRequest) {
@@ -84,14 +63,13 @@ public class ReanalyzeService {
log.info("Document structure analysis successful, starting redaction analysis...");
entityRedactionService.processDocument(classifiedDoc, analyzeRequest.getDossierTemplateId(), analyzeRequest.getManualRedactions(), analyzeRequest
.getDossierId());
redactionLogCreatorService.createRedactionLog(classifiedDoc, pageCount, analyzeRequest.getManualRedactions(), analyzeRequest
.getDossierTemplateId());
.getDossierId(), analyzeRequest.getFileAttributes());
redactionLogCreatorService.createRedactionLog(classifiedDoc, pageCount, analyzeRequest.getDossierTemplateId());
log.info("Redaction analysis successful...");
var legalBasis = legalBasisClient.getLegalBasisMapping(analyzeRequest.getDossierTemplateId());
var redactionLog = new RedactionLog(classifiedDoc.getRedactionLogEntities(), legalBasis, classifiedDoc.getDictionaryVersion()
var redactionLog = new RedactionLog(redactionServiceSettings.getAnalysisVersion(), classifiedDoc.getRedactionLogEntities(), legalBasis, classifiedDoc.getDictionaryVersion()
.getDossierTemplateVersion(), classifiedDoc.getDictionaryVersion()
.getDossierVersion(), classifiedDoc.getRulesVersion(), legalBasisClient.getVersion(analyzeRequest.getDossierTemplateId()));
@@ -130,20 +108,66 @@ public class ReanalyzeService {
DictionaryIncrement dictionaryIncrement = dictionaryService.getDictionaryIncrements(analyzeRequest.getDossierTemplateId(), new DictionaryVersion(redactionLog
.getDictionaryVersion(), redactionLog.getDossierDictionaryVersion()), analyzeRequest.getDossierId());
Set<String> manualForceAndRemoveIds = getForceAndRemoveIds(analyzeRequest.getManualRedactions());
Map<String, List<Comment>> comments = null;
Set<ManualRedactionEntry> manualAdds = null;
Set<Integer> sectionsToReanalyse = !analyzeRequest.getSectionsToReanalyse().isEmpty() ? analyzeRequest.getSectionsToReanalyse() :
findSectionsToReanalyse(dictionaryIncrement, redactionLog, text, analyzeRequest);
if (analyzeRequest.getManualRedactions() != null) {
// TODO comments will be removed from redactionLog, so we ignore this first.
comments = analyzeRequest.getManualRedactions().getComments();
manualAdds = analyzeRequest.getManualRedactions().getEntriesToAdd();
if (sectionsToReanalyse.isEmpty()) {
return finalizeAnalysis(analyzeRequest, startTime, redactionLog, text, dictionaryIncrement);
}
List<SectionText> reanalysisSections = text.getSectionTexts()
.stream()
.filter(sectionText -> sectionsToReanalyse.contains(sectionText.getSectionNumber()))
.collect(Collectors.toList());
KieContainer kieContainer = droolsExecutionService.updateRules(analyzeRequest.getDossierTemplateId());
Dictionary dictionary = dictionaryService.getDeepCopyDictionary(analyzeRequest.getDossierTemplateId(), analyzeRequest
.getDossierId());
Map<Integer, Set<Image>> imagesPerPage = new HashMap<>();
Set<Entity> entities = findEntities(reanalysisSections, dictionary, kieContainer, analyzeRequest, false, null, imagesPerPage);
if (dictionary.hasLocalEntries()) {
Map<Integer, Set<Entity>> hintsPerSectionNumber = entityRedactionService.getHintsPerSection(entities, dictionary);
Set<Entity> foundByLocal = findEntities(reanalysisSections, dictionary, kieContainer, analyzeRequest, true, hintsPerSectionNumber, imagesPerPage);
EntitySearchUtils.addEntitiesWithHigherRank(entities, foundByLocal, dictionary);
EntitySearchUtils.removeEntitiesContainedInLarger(entities);
}
Map<Integer, List<Entity>> entitiesPerPage = entityRedactionService.convertToEnititesPerPage(entities);
List<RedactionLogEntry> newRedactionLogEntries = new ArrayList<>();
for (int page = 1; page <= text.getNumberOfPages(); page++) {
if (entitiesPerPage.get(page) != null) {
newRedactionLogEntries.addAll(redactionLogCreatorService.addEntries(entitiesPerPage, page, analyzeRequest
.getDossierTemplateId()));
}
if (imagesPerPage.get(page) != null) {
newRedactionLogEntries.addAll(redactionLogCreatorService.addImageEntries(imagesPerPage, page, analyzeRequest
.getDossierTemplateId()));
}
}
redactionLog.getRedactionLogEntry().removeIf(entry -> sectionsToReanalyse.contains(entry.getSectionNumber()));
redactionLog.getRedactionLogEntry().addAll(newRedactionLogEntries);
AnalyzeResult analyzeResult = finalizeAnalysis(analyzeRequest, startTime, redactionLog, text, dictionaryIncrement);
analyzeResult.setWasReanalyzed(true);
return analyzeResult;
}
private Set<Integer> findSectionsToReanalyse(DictionaryIncrement dictionaryIncrement, RedactionLog redactionLog,
Text text, AnalyzeRequest analyzeRequest) {
Set<String> relevantManuallyModifiedAnnotationIds = getRelevantManuallyModifiedAnnotationIds(analyzeRequest.getManualRedactions());
Set<Integer> sectionsToReanalyse = new HashSet<>();
Map<Integer, Set<Image>> imageEntries = new HashMap<>();
for (RedactionLogEntry entry : redactionLog.getRedactionLogEntry()) {
if (entry.isManual() || manualForceAndRemoveIds.contains(entry.getId())) {
if (entry.isManual() || relevantManuallyModifiedAnnotationIds.contains(entry.getId())) {
sectionsToReanalyse.add(entry.getSectionNumber());
}
if (entry.isImage() || entry.getType().equals("image")) {
@@ -157,47 +181,24 @@ public class ReanalyzeService {
sectionsToReanalyse.add(sectionText.getSectionNumber());
}
if (manualAdds != null) {
for (SectionArea sectionArea : sectionText.getSectionAreas()) {
for (ManualRedactionEntry manualAdd : manualAdds) {
for (Rectangle manualPosition : manualAdd.getPositions()) {
if (sectionArea.contains(manualPosition)) {
manualAdd.setSection(sectionText.getHeadline());
manualAdd.setSectionNumber(sectionText.getSectionNumber());
}
}
}
}
}
}
log.info("Should reanalyze {} sections for request: {}", sectionsToReanalyse.size(), analyzeRequest);
if (sectionsToReanalyse.isEmpty() && (manualAdds == null || manualAdds.isEmpty())) {
return finalizeAnalysis(analyzeRequest, startTime, redactionLog, text, dictionaryIncrement);
}
return sectionsToReanalyse;
}
List<SectionText> reanalysisSections = new ArrayList<>();
for (SectionText sectionText : text.getSectionTexts()) {
if (sectionsToReanalyse.contains(sectionText.getSectionNumber())) {
reanalysisSections.add(sectionText);
}
}
//--
KieContainer kieContainer = droolsExecutionService.updateRules(analyzeRequest.getDossierTemplateId());
Dictionary dictionary = dictionaryService.getDeepCopyDictionary(analyzeRequest.getDossierTemplateId(), analyzeRequest
.getDossierId());
private Set<Entity> findEntities(List<SectionText> reanalysisSections, Dictionary dictionary,
KieContainer kieContainer, AnalyzeRequest analyzeRequest, boolean local,
Map<Integer, Set<Entity>> hintsPerSectionNumber,
Map<Integer, Set<Image>> imagesPerPage) {
List<SectionSearchableTextPair> sectionSearchableTextPairs = new ArrayList<>();
for (SectionText reanalysisSection : reanalysisSections) {
Set<Entity> entities = entityRedactionService.findEntities(reanalysisSection.getSearchableText(), reanalysisSection
.getHeadline(), reanalysisSection.getSectionNumber(), dictionary, false);
.getHeadline(), reanalysisSection.getSectionNumber(), dictionary, local);
if (reanalysisSection.getCellStarts() != null && !reanalysisSection.getCellStarts().isEmpty()) {
surroundingWordsService.addSurroundingText(entities, reanalysisSection.getSearchableText(), dictionary, reanalysisSection
.getCellStarts());
@@ -205,10 +206,28 @@ public class ReanalyzeService {
surroundingWordsService.addSurroundingText(entities, reanalysisSection.getSearchableText(), dictionary);
}
if (!local && reanalysisSection.getImages() != null && !reanalysisSection.getImages()
.isEmpty() && analyzeRequest.getManualRedactions() != null && analyzeRequest.getManualRedactions()
.getImageRecategorizations() != null) {
for (Image image : reanalysisSection.getImages()) {
String imageId = IdBuilder.buildId(image.getPosition(), image.getPage());
for (ManualImageRecategorization imageRecategorization : analyzeRequest.getManualRedactions()
.getImageRecategorizations()) {
if (imageRecategorization.getStatus().equals(Status.APPROVED) && imageRecategorization.getId()
.equals(imageId)) {
image.setType(imageRecategorization.getType());
}
}
}
}
sectionSearchableTextPairs.add(new SectionSearchableTextPair(Section.builder()
.isLocal(false)
.dictionaryTypes(dictionary.getTypes())
.entities(entities)
.entities(hintsPerSectionNumber != null && hintsPerSectionNumber.containsKey(reanalysisSection.getSectionNumber()) ? Stream
.concat(entities.stream(), hintsPerSectionNumber.get(reanalysisSection.getSectionNumber())
.stream())
.collect(Collectors.toSet()) : entities)
.text(reanalysisSection.getSearchableText().getAsStringWithLinebreaks())
.searchText(reanalysisSection.getSearchableText().toString())
.headline(reanalysisSection.getHeadline())
@@ -217,59 +236,24 @@ public class ReanalyzeService {
.searchableText(reanalysisSection.getSearchableText())
.dictionary(dictionary)
.images(reanalysisSection.getImages())
.fileAttributes(analyzeRequest.getFileAttributes())
.build(), reanalysisSection.getSearchableText()));
}
Set<Entity> entities = new HashSet<>();
Map<Integer, Set<Image>> imagesPerPage = new HashMap<>();
sectionSearchableTextPairs.forEach(sectionSearchableTextPair -> {
Section analysedRowSection = droolsExecutionService.executeRules(kieContainer, sectionSearchableTextPair.getSection());
entities.addAll(analysedRowSection.getEntities());
Section analysedSection = droolsExecutionService.executeRules(kieContainer, sectionSearchableTextPair.getSection());
entities.addAll(analysedSection.getEntities());
EntitySearchUtils.removeEntitiesContainedInLarger(entities);
for (Image image : analysedRowSection.getImages()) {
for (Image image : analysedSection.getImages()) {
imagesPerPage.computeIfAbsent(image.getPage(), (a) -> new HashSet<>()).add(image);
}
entityRedactionService.addLocalValuesToDictionary(analysedSection, dictionary);
});
Map<Integer, List<Entity>> entitiesPerPage = new HashMap<>();
for (Entity entity : entities) {
Map<Integer, List<EntityPositionSequence>> sequenceOnPage = new HashMap<>();
for (EntityPositionSequence entityPositionSequence : entity.getPositionSequences()) {
sequenceOnPage.computeIfAbsent(entityPositionSequence.getPageNumber(), (x) -> new ArrayList<>())
.add(entityPositionSequence);
}
for (Map.Entry<Integer, List<EntityPositionSequence>> entry : sequenceOnPage.entrySet()) {
entitiesPerPage.computeIfAbsent(entry.getKey(), (x) -> new ArrayList<>())
.add(new Entity(entity.getWord(), entity.getType(), entity.isRedaction(), entity.getRedactionReason(), entry
.getValue(), entity.getHeadline(), entity.getMatchedRule(), entity.getSectionNumber(), entity
.getLegalBasis(), entity.isDictionaryEntry(), entity.getTextBefore(), entity.getTextAfter(), entity
.getStart(), entity.getEnd(), entity.isDossierDictionaryEntry()));
}
}
List<RedactionLogEntry> newRedactionLogEntries = new ArrayList<>();
for (int page = 1; page <= text.getNumberOfPages(); page++) {
if (entitiesPerPage.get(page) != null) {
newRedactionLogEntries.addAll(redactionLogCreatorService.addEntries(entitiesPerPage, analyzeRequest.getManualRedactions(), page, analyzeRequest
.getDossierTemplateId()));
}
if (imagesPerPage.get(page) != null) {
newRedactionLogEntries.addAll(redactionLogCreatorService.addImageEntries(imagesPerPage, analyzeRequest.getManualRedactions(), page, analyzeRequest
.getDossierTemplateId()));
}
newRedactionLogEntries.addAll(redactionLogCreatorService.addManualAddEntries(manualAdds, comments, page, analyzeRequest
.getDossierTemplateId()));
}
redactionLog.getRedactionLogEntry().removeIf(entry -> sectionsToReanalyse.contains(entry.getSectionNumber()));
redactionLog.getRedactionLogEntry().addAll(newRedactionLogEntries);
return finalizeAnalysis(analyzeRequest, startTime, redactionLog, text, dictionaryIncrement);
return entities;
}
@@ -292,15 +276,19 @@ public class ReanalyzeService {
}
private Set<String> getForceAndRemoveIds(ManualRedactions manualRedactions) {
private Set<String> getRelevantManuallyModifiedAnnotationIds(ManualRedactions manualRedactions) {
if (manualRedactions == null) {
return new HashSet<>();
}
return Stream.concat(manualRedactions.getManualLegalBasisChanges().stream().map(ManualLegalBasisChange::getId),
Stream.concat(manualRedactions.getImageRecategorizations().stream().map(ManualImageRecategorization::getId),
Stream.concat(manualRedactions.getIdsToRemove().stream().map(IdRemoval::getId), manualRedactions.getForceRedacts().stream().map(ManualForceRedact::getId))))
return Stream.concat(manualRedactions.getManualLegalBasisChanges()
.stream()
.map(ManualLegalBasisChange::getId), Stream.concat(manualRedactions.getImageRecategorizations()
.stream()
.map(ManualImageRecategorization::getId), Stream.concat(manualRedactions.getIdsToRemove()
.stream()
.map(IdRemoval::getId), manualRedactions.getForceRedacts().stream().map(ManualForceRedact::getId))))
.collect(Collectors.toSet());
}
@@ -316,21 +304,18 @@ public class ReanalyzeService {
.sectionNumber(entry.getSectionNumber())
.section(entry.getSection())
.page(position.getPage())
.hasTransparency(entry.isImageHasTransparency())
.build();
}
private void excludeExcludedPages(RedactionLog redactionLog, Set<Integer> excludedPages) {
redactionLog.getRedactionLogEntry().forEach(entry -> {
entry.getPositions().forEach(pos -> {
if (excludedPages != null && excludedPages.contains(pos.getPage())) {
entry.setExcluded(true);
} else {
entry.setExcluded(false);
}
});
});
if(excludedPages != null && !excludedPages.isEmpty()) {
redactionLog.getRedactionLogEntry().forEach(entry -> entry.getPositions().forEach(pos -> { if (excludedPages.contains(pos.getPage())) {
entry.setExcluded(true);
}}));
}
}
}
@@ -1,6 +1,10 @@
package com.iqser.red.service.redaction.v1.server.redaction.service;
import com.iqser.red.service.redaction.v1.model.*;
import com.iqser.red.service.redaction.v1.model.CellRectangle;
import com.iqser.red.service.redaction.v1.model.Point;
import com.iqser.red.service.redaction.v1.model.Rectangle;
import com.iqser.red.service.redaction.v1.model.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.model.SectionRectangle;
import com.iqser.red.service.redaction.v1.server.classification.model.Document;
import com.iqser.red.service.redaction.v1.server.classification.model.Paragraph;
import com.iqser.red.service.redaction.v1.server.classification.model.TextBlock;
@@ -13,9 +17,7 @@ import com.iqser.red.service.redaction.v1.server.redaction.utils.IdBuilder;
import com.iqser.red.service.redaction.v1.server.tableextraction.model.AbstractTextContainer;
import com.iqser.red.service.redaction.v1.server.tableextraction.model.Cell;
import com.iqser.red.service.redaction.v1.server.tableextraction.model.Table;
import lombok.RequiredArgsConstructor;
import org.apache.commons.collections4.CollectionUtils;
import org.springframework.stereotype.Service;
@@ -33,10 +35,7 @@ public class RedactionLogCreatorService {
private final DictionaryService dictionaryService;
public void createRedactionLog(Document classifiedDoc, int numberOfPages, ManualRedactions manualRedactions,
String dossierTemplateId) {
Set<Integer> manualRedactionPages = getManualRedactionPages(manualRedactions);
public void createRedactionLog(Document classifiedDoc, int numberOfPages, String dossierTemplateId) {
for (int page = 1; page <= numberOfPages; page++) {
@@ -44,24 +43,18 @@ public class RedactionLogCreatorService {
if (classifiedDoc.getEntities().get(page) != null) {
classifiedDoc.getRedactionLogEntities()
.addAll(addEntries(classifiedDoc.getEntities(), manualRedactions, page, dossierTemplateId));
}
if (manualRedactionPages.contains(page)) {
classifiedDoc.getRedactionLogEntities()
.addAll(addManualAddEntries(manualRedactions.getEntriesToAdd(), manualRedactions.getComments(), page, dossierTemplateId));
.addAll(addEntries(classifiedDoc.getEntities(), page, dossierTemplateId));
}
if (classifiedDoc.getImages().get(page) != null && !classifiedDoc.getImages().get(page).isEmpty()) {
classifiedDoc.getRedactionLogEntities()
.addAll(addImageEntries(classifiedDoc.getImages(), manualRedactions, page, dossierTemplateId));
.addAll(addImageEntries(classifiedDoc.getImages(), page, dossierTemplateId));
}
}
}
public List<RedactionLogEntry> addImageEntries(Map<Integer, Set<Image>> images, ManualRedactions manualRedactions,
int pageNumber, String dossierTemplateId) {
public List<RedactionLogEntry> addImageEntries(Map<Integer, Set<Image>> images, int pageNumber, String dossierTemplateId) {
List<RedactionLogEntry> redactionLogEntities = new ArrayList<>();
@@ -71,7 +64,7 @@ public class RedactionLogCreatorService {
RedactionLogEntry redactionLogEntry = RedactionLogEntry.builder()
.id(id)
.color(getColorForImage(image, dossierTemplateId, false))
.color(getColor(image.getType(), dossierTemplateId, image.isRedaction()))
.isImage(true)
.type(image.getType())
.redacted(image.isRedaction())
@@ -87,119 +80,9 @@ public class RedactionLogCreatorService {
.getWidth(), (float) image.getPosition().getHeight(), pageNumber)))
.sectionNumber(image.getSectionNumber())
.section(image.getSection())
.imageHasTransparency(image.isHasTransparency())
.build();
if (manualRedactions != null && !manualRedactions.getImageRecategorizations().isEmpty()) {
for (ManualImageRecategorization recategorization : manualRedactions.getImageRecategorizations()) {
if (recategorization.getId().equals(id)) {
String manualOverrideReason = null;
if (recategorization.getStatus().equals(Status.APPROVED)) {
image.setType(recategorization.getType());
image.setRedaction(recategorization.isRedacted());
image.setLegalBasis(recategorization.getLegalBasis());
redactionLogEntry.setType(recategorization.getType());
redactionLogEntry.setHint(dictionaryService.isHint(recategorization.getType(), dossierTemplateId));
redactionLogEntry.setRedacted(recategorization.isRedacted());
redactionLogEntry.setStatus(Status.APPROVED);
redactionLogEntry.setLegalBasis(recategorization.getLegalBasis());
manualOverrideReason = image.getRedactionReason() + ", recategorized by manual override";
redactionLogEntry.setColor(getColorForImage(image, dossierTemplateId, false));
} else if (recategorization.getStatus().equals(Status.REQUESTED)) {
manualOverrideReason = image.getRedactionReason() + ", requested to recategorize";
redactionLogEntry.setStatus(Status.REQUESTED);
redactionLogEntry.setColor(getColorForImage(image, dossierTemplateId, true));
redactionLogEntry.setRecategorizationType(recategorization.getType());
} else {
redactionLogEntry.setStatus(Status.DECLINED);
}
image.setRedactionReason(manualOverrideReason != null ? manualOverrideReason : image.getRedactionReason());
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionType(ManualRedactionType.RECATEGORIZE);
}
}
}
if (manualRedactions != null && !manualRedactions.getIdsToRemove().isEmpty()) {
for (IdRemoval manualRemoval : manualRedactions.getIdsToRemove()) {
if (manualRemoval.getId().equals(id)) {
String manualOverrideReason = null;
if (manualRemoval.getStatus().equals(Status.APPROVED)) {
image.setRedaction(false);
redactionLogEntry.setRedacted(false);
redactionLogEntry.setStatus(Status.APPROVED);
manualOverrideReason = image.getRedactionReason() + ", removed by manual override";
redactionLogEntry.setColor(getColorForImage(image, dossierTemplateId, false));
} else if (manualRemoval.getStatus().equals(Status.REQUESTED)) {
manualOverrideReason = image.getRedactionReason() + ", requested to remove";
redactionLogEntry.setStatus(Status.REQUESTED);
redactionLogEntry.setColor(getColorForImage(image, dossierTemplateId, true));
} else {
redactionLogEntry.setStatus(Status.DECLINED);
}
image.setRedactionReason(manualOverrideReason != null ? manualOverrideReason : image.getRedactionReason());
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionType(ManualRedactionType.REMOVE);
}
}
}
if (manualRedactions != null && !manualRedactions.getForceRedacts().isEmpty()) {
for (ManualForceRedact manualForceRedact : manualRedactions.getForceRedacts()) {
if (manualForceRedact.getId().equals(id)) {
String manualOverrideReason = null;
if (manualForceRedact.getStatus().equals(Status.APPROVED)) {
image.setRedaction(true);
redactionLogEntry.setRedacted(true);
redactionLogEntry.setStatus(Status.APPROVED);
redactionLogEntry.setColor(getColorForImage(image, dossierTemplateId, false));
manualOverrideReason = image.getRedactionReason() + ", forced by manual override";
redactionLogEntry.setLegalBasis(manualForceRedact.getLegalBasis());
} else if (manualForceRedact.getStatus().equals(Status.REQUESTED)) {
manualOverrideReason = image.getRedactionReason() + ", requested to force redact";
redactionLogEntry.setStatus(Status.REQUESTED);
redactionLogEntry.setColor(getColorForImage(image, dossierTemplateId, true));
redactionLogEntry.setLegalBasis(manualForceRedact.getLegalBasis());
} else {
redactionLogEntry.setStatus(Status.DECLINED);
}
image.setRedactionReason(manualOverrideReason != null ? manualOverrideReason : image.getRedactionReason());
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionType(ManualRedactionType.FORCE_REDACT);
}
}
}
if (manualRedactions != null && !manualRedactions.getManualLegalBasisChanges().isEmpty()) {
for (ManualLegalBasisChange manualLegalBasisChange : manualRedactions.getManualLegalBasisChanges()) {
if (manualLegalBasisChange.getId().equals(id)) {
String manualOverrideReason = null;
if (manualLegalBasisChange.getStatus().equals(Status.APPROVED)) {
redactionLogEntry.setStatus(Status.APPROVED);
manualOverrideReason = image.getRedactionReason() + ", legal basis was manually changed";
redactionLogEntry.setLegalBasis(manualLegalBasisChange.getLegalBasis());
} else if (manualLegalBasisChange.getStatus().equals(Status.REQUESTED)) {
manualOverrideReason = image.getRedactionReason() + ", legal basis change requested";
redactionLogEntry.setStatus(Status.REQUESTED);
redactionLogEntry.setColor(getColorForImage(image, dossierTemplateId, true));
redactionLogEntry.setLegalBasisChangeValue(manualLegalBasisChange.getLegalBasis());
} else {
redactionLogEntry.setStatus(Status.DECLINED);
}
image.setRedactionReason(manualOverrideReason != null ? manualOverrideReason : image.getRedactionReason());
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionType(ManualRedactionType.LEGAL_BASIS_CHANGE);
}
}
}
redactionLogEntities.add(redactionLogEntry);
}
@@ -208,25 +91,7 @@ public class RedactionLogCreatorService {
}
private Set<Integer> getManualRedactionPages(ManualRedactions manualRedactions) {
Set<Integer> manualRedactionPages = new HashSet<>();
if (manualRedactions == null) {
return manualRedactionPages;
}
manualRedactions.getEntriesToAdd().forEach(entry -> {
entry.getPositions().forEach(pos -> {
manualRedactionPages.add(pos.getPage());
});
});
return manualRedactionPages;
}
public List<RedactionLogEntry> addEntries(Map<Integer, List<Entity>> entities, ManualRedactions manualRedactions,
int page, String dossierTemplateId) {
public List<RedactionLogEntry> addEntries(Map<Integer, List<Entity>> entities, int page, String dossierTemplateId) {
List<RedactionLogEntry> redactionLogEntities = new ArrayList<>();
@@ -236,7 +101,6 @@ public class RedactionLogCreatorService {
entityLoop:
for (Entity entity : entities.get(page)) {
List<Comment> comments = null;
for (EntityPositionSequence entityPositionSequence : entity.getPositionSequences()) {
@@ -249,85 +113,7 @@ public class RedactionLogCreatorService {
processedIds.add(entityPositionSequence.getId());
}
if (manualRedactions != null && !manualRedactions.getIdsToRemove().isEmpty()) {
for (IdRemoval manualRemoval : manualRedactions.getIdsToRemove()) {
if (manualRemoval.getId().equals(entityPositionSequence.getId())) {
comments = manualRedactions.getComments().get(manualRemoval.getId());
String manualOverrideReason = null;
if (manualRemoval.getStatus().equals(Status.APPROVED)) {
entity.setRedaction(false);
redactionLogEntry.setRedacted(false);
redactionLogEntry.setStatus(Status.APPROVED);
manualOverrideReason = entity.getRedactionReason() + ", removed by manual override";
redactionLogEntry.setColor(getColor(entity, dossierTemplateId, false));
} else if (manualRemoval.getStatus().equals(Status.REQUESTED)) {
manualOverrideReason = entity.getRedactionReason() + ", requested to remove";
redactionLogEntry.setStatus(Status.REQUESTED);
redactionLogEntry.setColor(getColor(entity, dossierTemplateId, true));
} else {
redactionLogEntry.setStatus(Status.DECLINED);
}
entity.setRedactionReason(manualOverrideReason != null ? manualOverrideReason : entity.getRedactionReason());
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionType(ManualRedactionType.REMOVE);
}
}
}
if (manualRedactions != null && !manualRedactions.getForceRedacts().isEmpty()) {
for (ManualForceRedact manualForceRedact : manualRedactions.getForceRedacts()) {
if (manualForceRedact.getId().equals(entityPositionSequence.getId())) {
String manualOverrideReason = null;
if (manualForceRedact.getStatus().equals(Status.APPROVED)) {
entity.setRedaction(true);
redactionLogEntry.setRedacted(true);
redactionLogEntry.setStatus(Status.APPROVED);
redactionLogEntry.setColor(getColor(entity, dossierTemplateId, false));
manualOverrideReason = entity.getRedactionReason() + ", forced by manual override";
redactionLogEntry.setLegalBasis(manualForceRedact.getLegalBasis());
} else if (manualForceRedact.getStatus().equals(Status.REQUESTED)) {
manualOverrideReason = entity.getRedactionReason() + ", requested to force redact";
redactionLogEntry.setStatus(Status.REQUESTED);
redactionLogEntry.setColor(getColor(entity, dossierTemplateId, true));
redactionLogEntry.setLegalBasis(manualForceRedact.getLegalBasis());
} else {
redactionLogEntry.setStatus(Status.DECLINED);
}
entity.setRedactionReason(manualOverrideReason != null ? manualOverrideReason : entity.getRedactionReason());
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionType(ManualRedactionType.FORCE_REDACT);
}
}
}
if (manualRedactions != null && !manualRedactions.getManualLegalBasisChanges().isEmpty()) {
for (ManualLegalBasisChange manualLegalBasisChange : manualRedactions.getManualLegalBasisChanges()) {
if (manualLegalBasisChange.getId().equals(entityPositionSequence.getId())) {
String manualOverrideReason = null;
if (manualLegalBasisChange.getStatus().equals(Status.APPROVED)) {
redactionLogEntry.setStatus(Status.APPROVED);
manualOverrideReason = entity.getRedactionReason() + ", legal basis was manually changed";
redactionLogEntry.setLegalBasis(manualLegalBasisChange.getLegalBasis());
} else if (manualLegalBasisChange.getStatus().equals(Status.REQUESTED)) {
manualOverrideReason = entity.getRedactionReason() + ", legal basis change requested";
redactionLogEntry.setStatus(Status.REQUESTED);
redactionLogEntry.setColor(getColor(entity, dossierTemplateId, true));
redactionLogEntry.setLegalBasisChangeValue(manualLegalBasisChange.getLegalBasis());
} else {
redactionLogEntry.setStatus(Status.DECLINED);
}
entity.setRedactionReason(manualOverrideReason != null ? manualOverrideReason : entity.getRedactionReason());
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionType(ManualRedactionType.LEGAL_BASIS_CHANGE);
}
}
}
redactionLogEntry.setId(entityPositionSequence.getId());
if (CollectionUtils.isNotEmpty(entityPositionSequence.getSequences())) {
List<Rectangle> rectanglesPerLine = getRectanglesPerLine(entityPositionSequence.getSequences()
@@ -335,16 +121,11 @@ public class RedactionLogCreatorService {
.flatMap(seq -> seq.getTextPositions().stream())
.collect(Collectors.toList()), page);
if (manualRedactions != null) {
comments = manualRedactions.getComments().get(entityPositionSequence.getId());
}
redactionLogEntry.setComments(comments);
redactionLogEntry.getPositions().addAll(rectanglesPerLine);
}
redactionLogEntry.setId(entityPositionSequence.getId());
// FIXME ids should never be null. Figure out why this happens.
if (redactionLogEntry.getId() != null) {
@@ -384,80 +165,17 @@ public class RedactionLogCreatorService {
}
public List<RedactionLogEntry> addManualAddEntries(Set<ManualRedactionEntry> manualAdds,
Map<String, List<Comment>> comments, int page,
String dossierTemplateId) {
List<RedactionLogEntry> redactionLogEntities = new ArrayList<>();
if (manualAdds == null) {
return redactionLogEntities;
}
for (ManualRedactionEntry manualRedactionEntry : manualAdds) {
String id = manualRedactionEntry.getId();
RedactionLogEntry redactionLogEntry = createRedactionLogEntry(manualRedactionEntry, id, dossierTemplateId);
List<Rectangle> rectanglesOnPage = new ArrayList<>();
for (Rectangle rectangle : manualRedactionEntry.getPositions()) {
if (page == rectangle.getPage()) {
rectanglesOnPage.add(rectangle);
redactionLogEntry.getPositions().add(rectangle);
}
}
redactionLogEntry.setComments(comments.get(id));
if (!rectanglesOnPage.isEmpty() && !approvedAndShouldBeInDictionary(manualRedactionEntry)) {
redactionLogEntities.add(redactionLogEntry);
}
}
return redactionLogEntities;
}
private boolean approvedAndShouldBeInDictionary(ManualRedactionEntry manualRedactionEntry) {
return manualRedactionEntry.getStatus().equals(Status.APPROVED) && manualRedactionEntry.isAddToDictionary();
}
private RedactionLogEntry createRedactionLogEntry(ManualRedactionEntry manualRedactionEntry, String id,
String dossierTemplateId) {
return RedactionLogEntry.builder()
.id(id)
.color(getColorForManualAdd(manualRedactionEntry.getType(), dossierTemplateId, manualRedactionEntry.getStatus()))
.reason(manualRedactionEntry.getReason())
.legalBasis(manualRedactionEntry.getLegalBasis())
.value(manualRedactionEntry.getValue())
.type(manualRedactionEntry.getType())
.redacted(true)
.isHint(false)
.section(manualRedactionEntry.getSection())
.sectionNumber(manualRedactionEntry.getSectionNumber())
.manual(true)
.status(manualRedactionEntry.getStatus())
.manualRedactionType(ManualRedactionType.ADD)
.isDictionaryEntry(false)
.isDossierDictionaryEntry(manualRedactionEntry.isAddToDossierDictionary())
.build();
}
private RedactionLogEntry createRedactionLogEntry(Entity entity, String dossierTemplateId) {
return RedactionLogEntry.builder()
.color(getColor(entity, dossierTemplateId, false))
.color(getColor(entity.getType(), dossierTemplateId, entity.isRedaction()))
.reason(entity.getRedactionReason())
.legalBasis(entity.getLegalBasis())
.value(entity.getWord())
.type(entity.getType())
.redacted(entity.isRedaction())
.isHint(isHint(entity, dossierTemplateId))
.isRecommendation(isRecommendation(entity, dossierTemplateId))
.isHint(isHint(entity.getType(), dossierTemplateId))
.isRecommendation(isRecommendation(entity.getType(), dossierTemplateId))
.section(entity.getHeadline())
.sectionNumber(entity.getSectionNumber())
.matchedRule(entity.getMatchedRule())
@@ -471,59 +189,6 @@ public class RedactionLogCreatorService {
}
private float[] getColor(Entity entity, String dossierTemplateId, boolean requestedToRemove) {
if (requestedToRemove) {
return dictionaryService.getRequestRemoveColor(dossierTemplateId);
}
if (!entity.isRedaction() && !isHint(entity, dossierTemplateId)) {
return dictionaryService.getNotRedactedColor(dossierTemplateId);
}
return dictionaryService.getColor(entity.getType(), dossierTemplateId);
}
private float[] getColorForManualAdd(String type, String dossierTemplateId, Status status) {
if (status.equals(Status.REQUESTED)) {
return dictionaryService.getRequestAddColor(dossierTemplateId);
} else if (status.equals(Status.DECLINED)) {
return dictionaryService.getNotRedactedColor(dossierTemplateId);
}
return getColor(type, dossierTemplateId);
}
private float[] getColor(String type, String dossierTemplateId) {
return dictionaryService.getColor(type, dossierTemplateId);
}
private float[] getColorForImage(Image image, String dossierTemplateId, boolean requestedToRemove) {
if (requestedToRemove) {
return dictionaryService.getRequestRemoveColor(dossierTemplateId);
}
if (!image.isRedaction() && !dictionaryService.isHint(image.getType(), dossierTemplateId)) {
return dictionaryService.getNotRedactedColor(dossierTemplateId);
}
return dictionaryService.getColor(image.getType(), dossierTemplateId);
}
private boolean isHint(Entity entity, String dossierTemplateId) {
return dictionaryService.isHint(entity.getType(), dossierTemplateId);
}
private boolean isRecommendation(Entity entity, String dossierTemplateId) {
return dictionaryService.isRecommendation(entity.getType(), dossierTemplateId);
}
private void addSectionGrid(Document classifiedDoc, int page) {
for (Paragraph paragraph : classifiedDoc.getParagraphs()) {
@@ -567,4 +232,26 @@ public class RedactionLogCreatorService {
}
}
private float[] getColor(String type, String dossierTemplateId, boolean isRedaction) {
if (!isRedaction && !isHint(type, dossierTemplateId)) {
return dictionaryService.getNotRedactedColor(dossierTemplateId);
}
return dictionaryService.getColor(type, dossierTemplateId);
}
private boolean isHint(String type, String dossierTemplateId) {
return dictionaryService.isHint(type, dossierTemplateId);
}
private boolean isRecommendation(String type, String dossierTemplateId) {
return dictionaryService.isRecommendation(type, dossierTemplateId);
}
}
@@ -0,0 +1,328 @@
package com.iqser.red.service.redaction.v1.server.redaction.service;
import java.time.OffsetDateTime;
import java.util.ArrayList;
import java.util.Collections;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.stereotype.Service;
import com.iqser.red.service.redaction.v1.model.Comment;
import com.iqser.red.service.redaction.v1.model.IdRemoval;
import com.iqser.red.service.redaction.v1.model.ManualForceRedact;
import com.iqser.red.service.redaction.v1.model.ManualImageRecategorization;
import com.iqser.red.service.redaction.v1.model.ManualLegalBasisChange;
import com.iqser.red.service.redaction.v1.model.ManualRedactionEntry;
import com.iqser.red.service.redaction.v1.model.ManualRedactionType;
import com.iqser.red.service.redaction.v1.model.ManualRedactions;
import com.iqser.red.service.redaction.v1.model.RedactionLog;
import com.iqser.red.service.redaction.v1.model.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.model.Status;
import lombok.AllArgsConstructor;
import lombok.Data;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@RequiredArgsConstructor
public class RedactionLogMergeService {
private final DictionaryService dictionaryService;
public RedactionLog mergeRedactionLogData(RedactionLog redactionLog, String dossierTemplateId,
ManualRedactions manualRedactions, Set<Integer> excludedPages) {
log.info("Merging Redaction log with manual redactions {}", manualRedactions);
if (manualRedactions != null) {
var manualRedactionLogEntries = addManualAddEntries(manualRedactions.getEntriesToAdd(), manualRedactions.getComments(), dossierTemplateId);
redactionLog.getRedactionLogEntry().addAll(manualRedactionLogEntries);
var manualRedactionWrappers = createManualRedactionWrappers(manualRedactions);
for (RedactionLogEntry entry : redactionLog.getRedactionLogEntry()) {
processRedactionLogEntry(manualRedactionWrappers.stream()
.filter(mr -> entry.getId().equals(mr.getId()))
.collect(Collectors.toList()), dossierTemplateId, entry);
entry.setComments(manualRedactions.getComments().get(entry.getId()));
if (excludedPages != null && !excludedPages.isEmpty()) {
entry.getPositions().forEach(pos -> {
if (excludedPages.contains(pos.getPage())) {
entry.setExcluded(true);
}
});
}
}
}
return redactionLog;
}
private List<ManualRedactionWrapper> createManualRedactionWrappers(ManualRedactions manualRedactions) {
List<ManualRedactionWrapper> manualRedactionWrappers = new ArrayList<>();
manualRedactions.getImageRecategorizations().forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getId(), item.getRequestDate(), item));
}
});
manualRedactions.getIdsToRemove().forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getId(), item.getRequestDate(), item));
}
});
manualRedactions.getForceRedacts().forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getId(), item.getRequestDate(), item));
}
});
manualRedactions.getManualLegalBasisChanges().forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getId(), item.getRequestDate(), item));
}
});
Collections.sort(manualRedactionWrappers);
return manualRedactionWrappers;
}
private void processRedactionLogEntry(List<ManualRedactionWrapper> manualRedactionWrappers,
String dossierTemplateId, RedactionLogEntry redactionLogEntry) {
manualRedactionWrappers.forEach(mrw -> {
if (mrw.getItem() instanceof ManualImageRecategorization) {
var imageRecategorization = (ManualImageRecategorization) mrw.getItem();
String manualOverrideReason = null;
if (imageRecategorization.getStatus().equals(Status.APPROVED)) {
redactionLogEntry.setStatus(Status.APPROVED);
redactionLogEntry.setType(imageRecategorization.getType());
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", recategorized by manual override");
} else if (imageRecategorization.getStatus().equals(Status.REQUESTED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", requested to recategorize");
redactionLogEntry.setStatus(Status.REQUESTED);
redactionLogEntry.setColor(getColor(redactionLogEntry.getType(), dossierTemplateId, false, redactionLogEntry
.isRedacted(), false));
redactionLogEntry.setRecategorizationType(imageRecategorization.getType());
} else {
redactionLogEntry.setStatus(Status.DECLINED);
}
redactionLogEntry.setManualRedactionUserId(imageRecategorization.getUser());
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionType(ManualRedactionType.RECATEGORIZE);
}
if (mrw.getItem() instanceof IdRemoval) {
var manualRemoval = (IdRemoval) mrw.getItem();
String manualOverrideReason = null;
if (manualRemoval.getStatus().equals(Status.APPROVED)) {
redactionLogEntry.setRedacted(false);
redactionLogEntry.setStatus(Status.APPROVED);
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", removed by manual override");
redactionLogEntry.setColor(getColor(redactionLogEntry.getType(), dossierTemplateId, false, redactionLogEntry
.isRedacted(), true));
} else if (manualRemoval.getStatus().equals(Status.REQUESTED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", requested to remove");
redactionLogEntry.setStatus(Status.REQUESTED);
redactionLogEntry.setColor(getColor(redactionLogEntry.getType(), dossierTemplateId, true, redactionLogEntry
.isRedacted(), false));
} else {
redactionLogEntry.setStatus(Status.DECLINED);
}
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionUserId(manualRemoval.getUser());
redactionLogEntry.setManualRedactionType(ManualRedactionType.REMOVE);
redactionLogEntry.setDictionaryEntry(manualRemoval.isRemoveFromDictionary());
redactionLogEntry.setDossierDictionaryEntry(manualRemoval.isRemoveFromDictionary());
}
if (mrw.getItem() instanceof ManualForceRedact) {
var manualForceRedact = (ManualForceRedact) mrw.getItem();
String manualOverrideReason = null;
if (manualForceRedact.getStatus().equals(Status.APPROVED)) {
redactionLogEntry.setRedacted(true);
redactionLogEntry.setStatus(Status.APPROVED);
redactionLogEntry.setColor(getColor(redactionLogEntry.getType(), dossierTemplateId, false, redactionLogEntry
.isRedacted(), false));
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", forced by manual override");
redactionLogEntry.setLegalBasis(manualForceRedact.getLegalBasis());
} else if (manualForceRedact.getStatus().equals(Status.REQUESTED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", requested to force redact");
redactionLogEntry.setStatus(Status.REQUESTED);
redactionLogEntry.setColor(getColor(redactionLogEntry.getType(), dossierTemplateId, true, redactionLogEntry
.isRedacted(), false));
redactionLogEntry.setLegalBasis(manualForceRedact.getLegalBasis());
} else {
redactionLogEntry.setStatus(Status.DECLINED);
}
redactionLogEntry.setManualRedactionUserId(manualForceRedact.getUser());
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionType(ManualRedactionType.FORCE_REDACT);
}
if (mrw.getItem() instanceof ManualLegalBasisChange) {
var manualLegalBasisChange = (ManualLegalBasisChange) mrw.getItem();
String manualOverrideReason = null;
if (manualLegalBasisChange.getStatus().equals(Status.APPROVED)) {
redactionLogEntry.setStatus(Status.APPROVED);
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", legal basis was manually changed");
redactionLogEntry.setLegalBasis(manualLegalBasisChange.getLegalBasis());
} else if (manualLegalBasisChange.getStatus().equals(Status.REQUESTED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", legal basis change requested");
redactionLogEntry.setStatus(Status.REQUESTED);
redactionLogEntry.setColor(getColor(redactionLogEntry.getType(), dossierTemplateId, true, redactionLogEntry
.isRedacted(), false));
redactionLogEntry.setLegalBasisChangeValue(manualLegalBasisChange.getLegalBasis());
} else {
redactionLogEntry.setStatus(Status.DECLINED);
}
redactionLogEntry.setManualRedactionUserId(manualLegalBasisChange.getUser());
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.setManual(true);
redactionLogEntry.setManualRedactionType(ManualRedactionType.LEGAL_BASIS_CHANGE);
}
});
}
private String mergeReasonIfNecessary(String currentReason, String addition) {
if (currentReason != null) {
if (!currentReason.contains(addition)) {
return currentReason + addition;
}
return currentReason;
} else {
return "";
}
}
public List<RedactionLogEntry> addManualAddEntries(Set<ManualRedactionEntry> manualAdds,
Map<String, List<Comment>> comments, String dossierTemplateId) {
List<RedactionLogEntry> redactionLogEntries = new ArrayList<>();
for (ManualRedactionEntry manualRedactionEntry : manualAdds) {
if (!approvedAndShouldBeInDictionary(manualRedactionEntry)) {
RedactionLogEntry redactionLogEntry = createRedactionLogEntry(manualRedactionEntry, manualRedactionEntry
.getId(), dossierTemplateId);
redactionLogEntry.setPositions(manualRedactionEntry.getPositions());
redactionLogEntry.setComments(comments.get(manualRedactionEntry.getId()));
redactionLogEntries.add(redactionLogEntry);
}
}
return redactionLogEntries;
}
private boolean approvedAndShouldBeInDictionary(ManualRedactionEntry manualRedactionEntry) {
return manualRedactionEntry.getStatus()
.equals(Status.APPROVED) && (manualRedactionEntry.isAddToDictionary() || manualRedactionEntry.isAddToDossierDictionary());
}
private RedactionLogEntry createRedactionLogEntry(ManualRedactionEntry manualRedactionEntry, String id,
String dossierTemplateId) {
return RedactionLogEntry.builder()
.id(id)
.color(getColorForManualAdd(manualRedactionEntry.getType(), dossierTemplateId, manualRedactionEntry.getStatus()))
.reason(manualRedactionEntry.getReason())
.isDictionaryEntry(manualRedactionEntry.isAddToDictionary())
.isDossierDictionaryEntry(manualRedactionEntry.isAddToDossierDictionary())
.legalBasis(manualRedactionEntry.getLegalBasis())
.value(manualRedactionEntry.getValue())
.type(manualRedactionEntry.getType())
.redacted(true)
.isHint(false)
.section(null)
.sectionNumber(-1)
.manual(true)
.status(manualRedactionEntry.getStatus())
.manualRedactionType(ManualRedactionType.ADD)
.manualRedactionUserId(manualRedactionEntry.getUser())
.build();
}
private float[] getColor(String type, String dossierTemplateId, boolean requested, boolean isRedaction,
boolean skipped) {
if (requested) {
return dictionaryService.getRequestRemoveColor(dossierTemplateId);
}
if (skipped || !isRedaction && !dictionaryService.isHint(type, dossierTemplateId)) {
return dictionaryService.getNotRedactedColor(dossierTemplateId);
}
return dictionaryService.getColor(type, dossierTemplateId);
}
private float[] getColorForManualAdd(String type, String dossierTemplateId, Status status) {
if (status.equals(Status.REQUESTED)) {
return dictionaryService.getRequestAddColor(dossierTemplateId);
} else if (status.equals(Status.DECLINED)) {
return dictionaryService.getNotRedactedColor(dossierTemplateId);
}
return getColor(type, dossierTemplateId);
}
private float[] getColor(String type, String dossierTemplateId) {
return dictionaryService.getColor(type, dossierTemplateId);
}
@Data
@AllArgsConstructor
private static class ManualRedactionWrapper implements Comparable<ManualRedactionWrapper> {
private String id;
private OffsetDateTime date;
private Object item;
@Override
public int compareTo(ManualRedactionWrapper o) {
return this.date.compareTo(o.date);
}
}
}
@@ -5,6 +5,7 @@ import com.iqser.red.service.redaction.v1.server.redaction.model.DictionaryIncre
import com.iqser.red.service.redaction.v1.server.redaction.model.Entity;
import com.iqser.red.service.redaction.v1.server.redaction.model.EntityPositionSequence;
import com.iqser.red.service.redaction.v1.server.redaction.model.SearchableText;
import lombok.experimental.UtilityClass;
import lombok.extern.slf4j.Slf4j;
@@ -17,7 +18,6 @@ import java.util.stream.Collectors;
@SuppressWarnings("PMD")
public class EntitySearchUtils {
public boolean sectionContainsAny(String sectionText, Set<DictionaryIncrementValue> values) {
String inputString = sectionText.toLowerCase(Locale.ROOT);
@@ -38,9 +38,7 @@ public class EntitySearchUtils {
if (startIndex > -1 && (startIndex == 0 || Character.isWhitespace(inputString.charAt(startIndex - 1)) || isSeparator(inputString
.charAt(startIndex - 1))) && (stopIndex == inputString.length() || isSeparator(inputString.charAt(stopIndex)))) {
if (value.isCaseinsensitive() || !value.isCaseinsensitive() && sectionText.substring(startIndex, stopIndex).equals(value.getValue())) {
return true;
}
return true;
}
} while (startIndex > -1);
}
@@ -98,8 +96,8 @@ public class EntitySearchUtils {
.sorted(Comparator.comparing(Entity::getStart))
.collect(Collectors.toList());
Entity firstEntity = orderedEntities.get(0);
List<EntityPositionSequence> positionSequences = text.getSequences(firstEntity.getWord().trim(), dictionary.isCaseInsensitiveDictionary(firstEntity
.getType()), firstEntity.getTargetSequences());
List<EntityPositionSequence> positionSequences = text.getSequences(firstEntity.getWord()
.trim(), dictionary.isCaseInsensitiveDictionary(firstEntity.getType()), firstEntity.getTargetSequences());
for (int i = 0; i <= orderedEntities.size() - 1; i++) {
try {
@@ -133,6 +131,7 @@ public class EntitySearchUtils {
public void addEntitiesWithHigherRank(Set<Entity> entities, Set<Entity> found, Dictionary dictionary) {
found.forEach(f -> addEntitiesWithHigherRank(entities, f, dictionary));
}
@@ -148,9 +147,11 @@ public class EntitySearchUtils {
entities.add(found);
}
public void addEntitiesIgnoreRank(Set<Entity> entities, Set<Entity> found) {
// HashSet keeps old value but we want the new.
entities.removeAll(found);
entities.addAll(found);
}
}
@@ -12,7 +12,7 @@ public class TextNormalizationUtilities {
* @return Text without line-break hyphenation.
*/
public static String removeHyphenLineBreaks(String text) {
return text.replaceAll("([^\\s\\d\\-]{2,})[\\-\\u00AD]\\R|\n\r(.+ )", "$1$2");
return text.replaceAll("([^\\s\\d\\-]{2,})[\\-\\u00AD]\\R", "$1");
}
}
@@ -118,7 +118,7 @@ public class ImageMergeService {
//set position for merged image with values of image1 and the height of both
Rectangle2D pos = new Rectangle2D.Float();
pos.setRect(image1.getPosition().getX(), image2.getPosition().getY(), rotation == 90 ? width + width2: width, rotation == 90 ? height1 : height1 + height2);
PdfImage newPdfImage = new PdfImage(mergedImage, pos, image1.getPage());
PdfImage newPdfImage = new PdfImage(mergedImage, pos, image1.getPage(), image1.isHasTransparency() || image2.isHasTransparency());
// Graphics need to be disposed
image1.getImage().flush();
@@ -15,4 +15,6 @@ public class RedactionServiceSettings {
private float maxImageCropboxRatio = 0.9f;
private int analysisVersion = 1;
}
@@ -18,7 +18,9 @@ import com.iqser.red.service.redaction.v1.server.redaction.utils.ResourceLoader;
import com.iqser.red.service.redaction.v1.server.redaction.utils.TextNormalizationUtilities;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import com.iqser.red.storage.commons.service.StorageService;
import lombok.SneakyThrows;
import org.apache.commons.io.IOUtils;
import org.junit.After;
import org.junit.Before;
@@ -84,7 +86,6 @@ public class RedactionIntegrationTest {
private static final String PII = "PII";
@Autowired
private RedactionController redactionController;
@@ -127,6 +128,7 @@ public class RedactionIntegrationTest {
private final Map<String, Integer> rankTypeMap = new HashMap<>();
private final Colors colors = new Colors();
private final Map<String, Long> reanlysisVersions = new HashMap<>();
private final Set<String> deleted = new HashSet<>();
private final static String TEST_DOSSIER_TEMPLATE_ID = "123";
private final static String TEST_DOSSIER_ID = "123";
@@ -152,18 +154,20 @@ public class RedactionIntegrationTest {
return kieServices.newKieContainer(kieModule.getReleaseId());
}
@Bean
@Primary
public StorageService inmemoryStorage() {
return new FileSystemBackedStorageService();
}
}
@After
public void cleanupStorage() {
if (this.storageService instanceof FileSystemBackedStorageService) {
((FileSystemBackedStorageService) this.storageService).clearStorage();
}
@@ -179,7 +183,8 @@ public class RedactionIntegrationTest {
loadDictionaryForTest();
loadTypeForTest();
when(dictionaryClient.getVersion(TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(0L);
when(dictionaryClient.getAllTypes(TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(TypeResponse.builder()
when(dictionaryClient.getAllTypes(TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(TypeResponse
.builder()
.types(getTypeResponse())
.build());
@@ -188,7 +193,7 @@ public class RedactionIntegrationTest {
.types(List.of(TypeResult.builder()
.type(DOSSIER_REDACTIONS)
.dossierTemplateId(TEST_DOSSIER_TEMPLATE_ID)
.hexColor( "#ffe187")
.hexColor("#ffe187")
.isHint(hintTypeMap.get(DOSSIER_REDACTIONS))
.isCaseInsensitive(caseInSensitiveMap.get(DOSSIER_REDACTIONS))
.isRecommendation(recommendationTypeMap.get(DOSSIER_REDACTIONS))
@@ -196,26 +201,42 @@ public class RedactionIntegrationTest {
.build()))
.build());
when(dictionaryClient.getDictionaryForType(VERTEBRATE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(VERTEBRATE, false));
when(dictionaryClient.getDictionaryForType(ADDRESS, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(ADDRESS, false));
when(dictionaryClient.getDictionaryForType(AUTHOR, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(AUTHOR, false));
when(dictionaryClient.getDictionaryForType(SPONSOR, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(SPONSOR, false));
when(dictionaryClient.getDictionaryForType(NO_REDACTION_INDICATOR, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(NO_REDACTION_INDICATOR, false));
when(dictionaryClient.getDictionaryForType(REDACTION_INDICATOR, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(REDACTION_INDICATOR, false));
when(dictionaryClient.getDictionaryForType(HINT_ONLY, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(HINT_ONLY, false));
when(dictionaryClient.getDictionaryForType(MUST_REDACT, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(MUST_REDACT, false));
when(dictionaryClient.getDictionaryForType(PUBLISHED_INFORMATION, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(PUBLISHED_INFORMATION, false));
when(dictionaryClient.getDictionaryForType(TEST_METHOD, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(TEST_METHOD, false));
when(dictionaryClient.getDictionaryForType(VERTEBRATE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(VERTEBRATE, false));
when(dictionaryClient.getDictionaryForType(ADDRESS, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(ADDRESS, false));
when(dictionaryClient.getDictionaryForType(AUTHOR, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(AUTHOR, false));
when(dictionaryClient.getDictionaryForType(SPONSOR, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(SPONSOR, false));
when(dictionaryClient.getDictionaryForType(NO_REDACTION_INDICATOR, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(NO_REDACTION_INDICATOR, false));
when(dictionaryClient.getDictionaryForType(REDACTION_INDICATOR, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(REDACTION_INDICATOR, false));
when(dictionaryClient.getDictionaryForType(HINT_ONLY, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(HINT_ONLY, false));
when(dictionaryClient.getDictionaryForType(MUST_REDACT, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(MUST_REDACT, false));
when(dictionaryClient.getDictionaryForType(PUBLISHED_INFORMATION, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(PUBLISHED_INFORMATION, false));
when(dictionaryClient.getDictionaryForType(TEST_METHOD, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(TEST_METHOD, false));
when(dictionaryClient.getDictionaryForType(PII, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(PII, false));
when(dictionaryClient.getDictionaryForType(RECOMMENDATION_AUTHOR, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(RECOMMENDATION_AUTHOR, false));
when(dictionaryClient.getDictionaryForType(RECOMMENDATION_ADDRESS, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(RECOMMENDATION_ADDRESS, false));
when(dictionaryClient.getDictionaryForType(FALSE_POSITIVE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(FALSE_POSITIVE, false));
when(dictionaryClient.getDictionaryForType(PURITY, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(PURITY, false));
when(dictionaryClient.getDictionaryForType(RECOMMENDATION_AUTHOR, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(RECOMMENDATION_AUTHOR, false));
when(dictionaryClient.getDictionaryForType(RECOMMENDATION_ADDRESS, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(RECOMMENDATION_ADDRESS, false));
when(dictionaryClient.getDictionaryForType(FALSE_POSITIVE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(FALSE_POSITIVE, false));
when(dictionaryClient.getDictionaryForType(PURITY, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(PURITY, false));
when(dictionaryClient.getDictionaryForType(IMAGE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(IMAGE, false));
when(dictionaryClient.getDictionaryForType(OCR, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(OCR, false));
when(dictionaryClient.getDictionaryForType(LOGO, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(LOGO, false));
when(dictionaryClient.getDictionaryForType(SIGNATURE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(SIGNATURE, false));
when(dictionaryClient.getDictionaryForType(FORMULA, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(FORMULA, false));
when(dictionaryClient.getDictionaryForType(SIGNATURE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(SIGNATURE, false));
when(dictionaryClient.getDictionaryForType(FORMULA, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(FORMULA, false));
when(dictionaryClient.getDictionaryForType(DOSSIER_REDACTIONS, TEST_DOSSIER_TEMPLATE_ID, TEST_DOSSIER_ID)).thenReturn(getDictionaryResponse(DOSSIER_REDACTIONS, true));
when(dictionaryClient.getColors(TEST_DOSSIER_TEMPLATE_ID)).thenReturn(colors);
}
@@ -477,7 +498,8 @@ public class RedactionIntegrationTest {
return DictionaryResponse.builder()
.hexColor(typeColorMap.get(type))
.entries(isDossierDictionary ? toDictionaryEntry(dossierDictionary.get(type)) : toDictionaryEntry(dictionary.get(type)))
.entries(isDossierDictionary ? toDictionaryEntry(dossierDictionary.get(type)) : toDictionaryEntry(dictionary
.get(type)))
.isHint(hintTypeMap.get(type))
.isCaseInsensitive(caseInSensitiveMap.get(type))
.isRecommendation(recommendationTypeMap.get(type))
@@ -490,7 +512,8 @@ public class RedactionIntegrationTest {
List<DictionaryEntry> dictionaryEntries = new ArrayList<>();
entries.forEach(entry -> {
dictionaryEntries.add(new DictionaryEntry(entry, reanlysisVersions.containsKey(entry) ? reanlysisVersions.get(entry) : 0L, false));
dictionaryEntries.add(new DictionaryEntry(entry, reanlysisVersions.containsKey(entry) ? reanlysisVersions.get(entry) : 0L, deleted
.contains(entry) ? true : false));
});
return dictionaryEntries;
}
@@ -498,6 +521,7 @@ public class RedactionIntegrationTest {
@Test
public void test270Rotated() {
AnalyzeRequest request = prepareStorage("files/Minimal Examples/270Rotated.pdf");
MemoryStats.printMemoryStats();
AnalyzeResult result = reanalyzeService.analyze(request);
@@ -508,12 +532,14 @@ public class RedactionIntegrationTest {
@Test
@Ignore
public void testLargeScannedFileOOM() {
AnalyzeRequest request = prepareStorage("scanned/VV-377031.pdf");
MemoryStats.printMemoryStats();
AnalyzeResult result = reanalyzeService.analyze(request);
assertThat(result).isNotNull();
}
@Test
public void testMergedImages() throws IOException {
@@ -552,14 +578,13 @@ public class RedactionIntegrationTest {
long rend = System.currentTimeMillis();
System.out.println("reanalysis analysis duration: " + (rend - rstart));
long end = System.currentTimeMillis();
System.out.println("duration: " + (end - start));
}
@Test
@Ignore
public void noExceptionShouldBeThrownForAnyFiles() throws IOException {
@@ -635,6 +660,13 @@ public class RedactionIntegrationTest {
AnalyzeRequest request = prepareStorage(pdfFileResource.getInputStream());
request.setExcludedPages(Set.of(1));
request.setFileAttributes(List.of(FileAttribute.builder()
.id("fileAttributeId")
.label("Vertebrate Study")
.placeholder("{fileattributes.vertebrateStudy}")
.value("true")
.build()));
AnalyzeResult result = reanalyzeService.analyze(request);
var redactionLog = redactionStorageService.getRedactionLog(TEST_DOSSIER_ID, TEST_FILE_ID);
@@ -681,12 +713,18 @@ public class RedactionIntegrationTest {
dictionary.get(AUTHOR).add("physical");
reanlysisVersions.put("physical", 2L);
// dictionary.get(VERTEBRATE).add("s-metolachlor");
// reanlysisVersions.put("s-metolachlor", 3L);
deleted.add("David Chubb");
dictionary.get(FALSE_POSITIVE).add("David Chubb");
reanlysisVersions.put("David Chubb", 3L);
when(dictionaryClient.getVersion(TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(3L);
when(dictionaryClient.getDictionaryForType(VERTEBRATE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(getDictionaryResponse(VERTEBRATE, false));
when(dictionaryClient.getDictionaryForType(VERTEBRATE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(VERTEBRATE, false));
when(dictionaryClient.getDictionaryForType(FALSE_POSITIVE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER))
.thenReturn(getDictionaryResponse(FALSE_POSITIVE, false));
start = System.currentTimeMillis();
@@ -696,16 +734,12 @@ public class RedactionIntegrationTest {
.id("37eee3e9d589a5cc529bfec38c3ba479")
.status(Status.APPROVED)
.type("signature")
.redacted(true)
.legalBasis("Article 39(e)(1) and Article 39(e)(2) of Regulation (EC) No 178/2002")
.build()));
request.setManualRedactions(manualRedactions);
AnalyzeResult reanalyzeResult = reanalyzeService.reanalyze(request);
redactionLog = redactionStorageService.getRedactionLog(TEST_DOSSIER_ID, TEST_FILE_ID);
end = System.currentTimeMillis();
@@ -775,7 +809,6 @@ public class RedactionIntegrationTest {
.status(Status.APPROVED)
.build()));
manualRedactions.getComments().put("e5be0f1d941bbb92a068e198648d06c4", List.of(comment));
manualRedactions.getComments().put("0836727c3508a0b2ea271da69c04cc2f", List.of(comment));
manualRedactions.getComments().put(manualAddId, List.of(comment));
@@ -790,12 +823,10 @@ public class RedactionIntegrationTest {
// manualRedactions.getEntriesToAdd().add(manualRedactionEntry);
AnalyzeRequest request = prepareStorage(pdfFileResource.getInputStream());
request.setManualRedactions(manualRedactions);
AnalyzeResult result = reanalyzeService.analyze(request);
manualRedactions.getEntriesToAdd().add(manualRedactionEntry);
manualRedactions.setIdsToRemove(Set.of(IdRemoval.builder()
.id("5b940b2cb401ed9f5be6fc24f6e77bcf")
@@ -816,7 +847,6 @@ public class RedactionIntegrationTest {
.fileId(TEST_FILE_ID)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream("/tmp/Annotated.pdf")) {
fileOutputStream.write(annotateResponse.getDocument());
}
@@ -833,7 +863,6 @@ public class RedactionIntegrationTest {
System.out.println("classificationTest");
ClassPathResource pdfFileResource = new ClassPathResource("files/new/Single Study - Oral (Gavage) Mouse.pdf");
AnalyzeRequest request = prepareStorage(pdfFileResource.getInputStream());
RedactionRequest redactionRequest = RedactionRequest.builder()
@@ -934,8 +963,10 @@ public class RedactionIntegrationTest {
});
}
@SneakyThrows
private AnalyzeRequest prepareStorage(String file) {
ClassPathResource pdfFileResource = new ClassPathResource(file);
return prepareStorage(pdfFileResource.getInputStream());
@@ -967,7 +998,6 @@ public class RedactionIntegrationTest {
long start = System.currentTimeMillis();
ClassPathResource pdfFileResource = new ClassPathResource("files/Minimal Examples/sponsor_companies.pdf");
AnalyzeRequest request = prepareStorage(pdfFileResource.getInputStream());
AnalyzeResult result = reanalyzeService.analyze(request);
@@ -151,7 +151,7 @@ public class EntityRedactionServiceTest {
when(dictionaryClient.getDictionaryForType(SPONSOR_CODE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(sponsorResponse);
Document classifiedDoc = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId");
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId", null);
assertThat(classifiedDoc.getEntities()).hasSize(1); // one page
assertThat(classifiedDoc.getEntities().get(1)).hasSize(7);// 3 author cells, 1 address, 1 Y and 2 N entities
}
@@ -177,7 +177,7 @@ public class EntityRedactionServiceTest {
when(dictionaryClient.getDictionaryForType(SPONSOR_CODE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(sponsorResponse);
Document classifiedDoc = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId");
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId", null);
assertThat(classifiedDoc.getEntities()).hasSize(1); // one page
assertThat(classifiedDoc.getEntities().get(1)).hasSize(7);// 3 author cells, 1 address, 1 Y and 2 N entities
}
@@ -202,7 +202,7 @@ public class EntityRedactionServiceTest {
.build();
when(dictionaryClient.getDictionaryForType(SPONSOR_CODE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(sponsorResponse);
Document classifiedDoc = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId");
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId", null);
assertThat(classifiedDoc.getEntities()
.entrySet()
.stream()
@@ -210,7 +210,7 @@ public class EntityRedactionServiceTest {
pdfFileResource = new ClassPathResource("files/Compounds/27 A8637C - EU AIR3 - MCP Section 1 - Identity of " +
"the plant protection product.pdf");
classifiedDoc = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId");
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId", null);
assertThat(classifiedDoc.getEntities()
.entrySet()
.stream()
@@ -235,7 +235,7 @@ public class EntityRedactionServiceTest {
.build();
when(dictionaryClient.getDictionaryForType(SPONSOR_CODE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(sponsorResponse);
Document classifiedDoc = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId");
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId", null);
assertThat(classifiedDoc.getEntities()).hasSize(1); // one page
assertThat(classifiedDoc.getEntities().get(1).stream()
.filter(entity -> entity.getMatchedRule() == 9)
@@ -302,7 +302,7 @@ public class EntityRedactionServiceTest {
.build();
when(dictionaryClient.getDictionaryForType(SPONSOR_CODE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(sponsorResponse);
Document classifiedDoc = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId");
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId", null);
assertThat(classifiedDoc.getEntities()).hasSize(1); // one page
assertThat(classifiedDoc.getEntities().get(1).stream()
.filter(entity -> entity.getMatchedRule() == 6)
@@ -341,7 +341,7 @@ public class EntityRedactionServiceTest {
.build();
when(dictionaryClient.getDictionaryForType(SPONSOR_CODE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(dictionaryResponse);
Document classifiedDoc = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId");
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId", null);
assertThat(classifiedDoc.getEntities()).hasSize(1); // one page
assertThat(classifiedDoc.getEntities().get(1).stream()
.filter(entity -> entity.getMatchedRule() == 11)
@@ -371,7 +371,7 @@ public class EntityRedactionServiceTest {
.build();
when(dictionaryClient.getDictionaryForType(SPONSOR_CODE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(sponsorResponse);
Document classifiedDoc = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId");
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId", null);
assertThat(classifiedDoc.getEntities()).hasSize(2); // two pages
assertThat(classifiedDoc.getEntities().get(1).stream().filter(entity -> entity.getMatchedRule() == 9).count()).isEqualTo(8);
assertThat(classifiedDoc.getEntities().get(2).stream().filter(entity -> entity.getMatchedRule() == 9).count()).isEqualTo(5); // 2 names, 1 address, 2 Y
@@ -390,7 +390,7 @@ public class EntityRedactionServiceTest {
when(dictionaryClient.getDictionaryForType(ADDRESS_CODE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(addressResponse);
classifiedDoc = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId");
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId", null);
assertThat(classifiedDoc.getEntities()).hasSize(1); // one page
assertThat(classifiedDoc.getEntities().get(1).stream().filter(entity -> entity.getMatchedRule() == 9).count()).isEqualTo(3);
assertThat(classifiedDoc.getEntities().get(1).stream().filter(entity -> entity.getMatchedRule() == 8).count()).isEqualTo(9);
@@ -419,7 +419,7 @@ public class EntityRedactionServiceTest {
.build();
when(dictionaryClient.getDictionaryForType(SPONSOR_CODE, TEST_DOSSIER_TEMPLATE_ID, DictionaryResource.GLOBAL_DOSSIER)).thenReturn(sponsorResponse);
Document classifiedDoc = pdfSegmentationService.parseDocument(pdfFileResource.getInputStream());
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId");
entityRedactionService.processDocument(classifiedDoc, TEST_DOSSIER_TEMPLATE_ID, null, "dossierId", null);
assertThat(classifiedDoc.getEntities()).hasSize(1); // one page
assertThat(classifiedDoc.getEntities().get(1).stream().filter(entity -> entity.getMatchedRule() == 8).count()).isEqualTo(6);
}
@@ -1676,7 +1676,6 @@ da Silva Rejane
Das R
Das, R.
Daughtry, CST
David Chubb
David Chubb|Lorraine Britton
David Clarke
Davies
@@ -235,4 +235,5 @@ N/A
No details reported
Not available
Test facility
TBD
TBD
David Chubb
@@ -268,7 +268,7 @@ rule "18: Redact contact information if Producer is found"
rule "19: Redact AUTHOR(S)"
when
Section(searchText.contains("AUTHOR(S):"))
Section(searchText.contains("AUTHOR(S):") && fileAttributeByPlaceholderEquals("{fileattributes.vertebrateStudy}", "true"))
then
section.redactLinesBetween("AUTHOR(S):", "COMPLETION DATE:", "PII", 19, true, "AUTHOR(S) was found", "Reg (EC) No 1107/2009 Art. 63 (2e)");
end