Compare commits

...
Author SHA1 Message Date
Andrei Isvoran 97291ffcae test publish stuff 2024-03-04 09:55:52 +02:00
Kevin Tumma 9a9867e739 Update .gitlab-ci.yml 2024-03-01 14:13:31 +01:00
Andrei Isvoran aa20a5c201 disable test 2024-03-01 14:56:14 +02:00
Andrei Isvoran 600394c366 change gitlab-ci 2024-03-01 14:51:59 +02:00
Andrei Isvoran 8fd9855b2c add public to it 2024-03-01 12:11:53 +02:00
Andrei Isvoran 2a8f1ecdd2 add public to it 2024-03-01 12:05:11 +02:00
Andrei Isvoran 6202e95ad8 change to pages 2024-03-01 11:59:26 +02:00
Andrei Isvoran b1fee50718 change to pages 2024-03-01 11:53:27 +02:00
Andrei Isvoran 3a59bff246 add publish keyword 2024-03-01 11:49:19 +02:00
Andrei Isvoran 57683d49b6 fix path 2024-03-01 11:48:06 +02:00
Andrei Isvoran 0fd01fa1c3 add dependsOn(delombok) 2024-03-01 11:44:37 +02:00
Andrei Isvoran 6d66e5dac3 add sleep 2024-03-01 11:24:59 +02:00
Andrei Isvoran 446c3e56a8 draft 2024-03-01 11:23:45 +02:00
Andrei Isvoran daab1f1b0a draft 2024-03-01 10:10:24 +02:00
Andrei Isvoran af70705250 draft 2024-03-01 10:06:55 +02:00
Andrei Isvoran f29f8626e9 draft 2024-03-01 09:59:31 +02:00
Andrei Isvoran 940e6e7b42 draft 2024-03-01 09:52:13 +02:00
Andrei Isvoran c08ad75893 draft 2024-03-01 09:49:55 +02:00
Andrei Isvoran b8d9b101c9 draft 2024-03-01 09:47:28 +02:00
Andrei Isvoran a1ea354225 draft 2024-03-01 09:39:53 +02:00
Andrei Isvoran e9f516580e draft 2024-02-29 17:48:02 +02:00
Andrei Isvoran b006b8c1ab draft 2024-02-29 17:36:31 +02:00
Andrei Isvoran 78912adeb6 draft 2024-02-29 17:33:23 +02:00
Andrei Isvoran 9bbff158c0 draft 2024-02-29 17:28:33 +02:00
Andrei Isvoran 6e0b343de3 draft 2024-02-29 17:21:39 +02:00
Andrei Isvoran 5bc9b60623 draft 2024-02-29 17:16:09 +02:00
Andrei Isvoran e8b32681ce draft 2024-02-29 16:40:59 +02:00
Andrei Isvoran d29b6bf816 draft 2024-02-29 16:39:09 +02:00
Corina Olariu b6ad1b5e91 Merge branch 'RED-8590' into 'master'
RED-8590 - Missing reason for added CBI Address, recategorized LOGO and signature

Closes RED-8590

See merge request redactmanager/redaction-service!293
2024-02-29 13:17:56 +01:00
Corina Olariu 5f961b0f99 RED-8590 - Missing reason for added CBI Address, recategorized LOGO and signature 2024-02-29 13:17:56 +01:00
Andrei Isvoran 89dea4138a Merge branch 'RED-8586' into 'master'
RED-8586 - Fix confidentiality rules

Closes RED-8586

See merge request redactmanager/redaction-service!294
2024-02-29 12:58:23 +01:00
Andrei Isvoran 4fb8b10429 RED-8586 - Fix confidentiality rules 2024-02-29 12:58:23 +01:00
Yannik Hampe f09a4e4d42 Merge branch 'RED-8481-rules' into 'master'
RED-8481: use visual layout parser for signature extraction

Closes RED-8481

See merge request redactmanager/redaction-service!296
2024-02-29 09:19:41 +01:00
Yannik Hampe ab5dc2f46b RED-8481: use visual layout parser for signature extraction 2024-02-29 09:19:41 +01:00
Kilian Schüttler b50899e18c Merge branch 'RED-8615' into 'master'
RED-8615: Revert and change the current behaviour of manualChanges

Closes RED-8615

See merge request redactmanager/redaction-service!291
2024-02-28 13:12:40 +01:00
Kilian Schüttler 30d0fd7def RED-8615: Revert and change the current behaviour of manualChanges 2024-02-28 13:12:40 +01:00
Yannik Hampe 23b8d164d2 Merge branch 'RED-8481-rules' into 'master'
RED-8481: use visual layout parser for signature extraction

Closes RED-8481

See merge request redactmanager/redaction-service!290
2024-02-28 09:04:55 +01:00
Yannik Hampe 0bfd92846f RED-8481: use visual layout parser for signature extraction 2024-02-28 09:04:55 +01:00
Kilian Schüttler ca3bb600f3 Merge branch 'RED-7384' into 'master'
More migration fixes

Closes RED-7384

See merge request redactmanager/redaction-service!280
2024-02-27 10:04:27 +01:00
Kilian Schüttler 5ffef504e4 More migration fixes 2024-02-27 10:04:27 +01:00
Yannik Hampe 94b7b741f8 Merge branch 'RED-8481' into 'master'
RED-8481: use visual layout parser for signature extraction

Closes RED-8481

See merge request redactmanager/redaction-service!289
2024-02-27 08:38:03 +01:00
Yannik Hampe 79ac1105f6 RED-8481: use visual layout parser for signature extraction 2024-02-27 08:38:03 +01:00
Kilian Schüttler 87f74c31c6 Merge branch 'hotfix' into 'master'
hotfix: streamEntitiesWhereRowContainsEntityOfType is broken

See merge request redactmanager/redaction-service!285
2024-02-23 14:30:48 +01:00
Kilian Schüttler 5f67efc8c7 hotfix: streamEntitiesWhereRowContainsEntityOfType is broken 2024-02-23 14:30:48 +01:00
Corina Olariu fd3fe87d90 Merge branch 'RED-8589' into 'master'
RED-8589 - Add "MANUAL" engine to all annotations that has entries in manualChanges

Closes RED-8589

See merge request redactmanager/redaction-service!282
2024-02-23 10:50:05 +01:00
Corina Olariu a85197cda4 RED-8589 - Add "MANUAL" engine to all annotations that has entries in manualChanges 2024-02-23 10:50:05 +01:00
Maverick Studer 05884533d1 Merge branch 'RED-8607' into 'master'
RED-8607: Higher rank hint removed if overlaps lower rank redaction

Closes RED-8607

See merge request redactmanager/redaction-service!283
2024-02-22 15:53:31 +01:00
Maverick Studer 310daa8060 RED-8607: Higher rank hint removed if overlaps lower rank redaction 2024-02-22 15:53:31 +01:00
Andrei Isvoran 7b798ae543 Merge branch 'RED-8588' into 'master'
RED-8588 - Fix ADD_TO_DICT

Closes RED-8588

See merge request redactmanager/redaction-service!281
2024-02-20 14:33:32 +01:00
Andrei Isvoran 3143f87587 RED-8588 - Fix ADD_TO_DICT 2024-02-20 14:33:31 +01:00
Corina Olariu 5fb3626208 Merge branch 'RED-7886' into 'master'
RED-7886 - Endpoint for rule validation

Closes RED-7886

See merge request redactmanager/redaction-service!278
2024-02-20 07:57:48 +01:00
Corina Olariu fb2d1fb2f2 RED-7886 - Endpoint for rule validation 2024-02-20 07:57:48 +01:00
Ali Oezyetimoglu cadbf6f275 Merge branch 'RED-8480' into 'master'
RED-8480: updated persistence service version and added legalBasis in ManualChangeOverwrite

Closes RED-8480

See merge request redactmanager/redaction-service!279
2024-02-16 14:58:27 +01:00
Ali Oezyetimoglu ea5d315dc3 RED-8480: updated persistence service version and added legalBasis in ManualChangeOverwrite 2024-02-16 14:58:27 +01:00
Andrei Isvoran 46990eb632 Merge branch 'RED-8490' into 'master'
RED-8490 - Add ADD_TO_DICTIONARY in manual changes for entries

Closes RED-8490

See merge request redactmanager/redaction-service!277
2024-02-14 08:51:09 +01:00
Andrei Isvoran 71e799bb92 RED-8490 - Add ADD_TO_DICTIONARY in manual changes for entries 2024-02-14 08:51:09 +01:00
Maverick Studer 09069b0095 Merge branch 'RED-8534' into 'master'
RED-8534: RECTANGLE is ENTITY instead of AREA

Closes RED-8534

See merge request redactmanager/redaction-service!276
2024-02-13 14:25:11 +01:00
Maverick Studer 01c44f6877 RED-8534: RECTANGLE is ENTITY instead of AREA 2024-02-13 14:25:11 +01:00
Kilian Schüttler 3b94e68af7 Merge branch 'RED-7384' into 'master'
RED-7384: various fixes for migration

See merge request redactmanager/redaction-service!275
2024-02-13 09:41:04 +01:00
Kilian Schüttler 5f598ff70c RED-7384: various fixes for migration 2024-02-13 09:41:03 +01:00
Andrei Isvoran b8064ce6e3 Merge branch 'RED-8542' into 'master'
RED-8542 - Only SKIPPED redaction should be displayed if it overlaps an ACTIVE...

Closes RED-8542

See merge request redactmanager/redaction-service!274
2024-02-13 08:17:40 +01:00
Andrei Isvoran 3b8202d21b RED-8542 - Only SKIPPED redaction should be displayed if it overlaps an ACTIVE... 2024-02-13 08:17:40 +01:00
Maverick Studer 94a75aa100 Merge branch 'RED-8451' into 'master'
RED-8451: RECATEGORIZED hint is APPLIED instead of SKIPPED

Closes RED-8451

See merge request redactmanager/redaction-service!273
2024-02-06 14:28:11 +01:00
Maverick Studer cc62bbc3ec RED-8451: RECATEGORIZED hint is APPLIED instead of SKIPPED 2024-02-06 14:28:11 +01:00
Maverick Studer 78869a13f6 Merge branch 'RED-8372' into 'master'
RED-8372: Include additional info about imported redactions in redaction annotations

Closes RED-8372

See merge request redactmanager/redaction-service!272
2024-02-06 09:58:00 +01:00
Maverick Studer c1028e7431 RED-8372: Include additional info about imported redactions in redaction annotations 2024-02-06 09:58:00 +01:00
Andrei Isvoran aa977c5a32 Merge branch 'RED-8248-dm' into 'master'
RED-8428 - Keep RESIZE for backwards compatibility for documine. RESIZE will...

Closes RED-8248

See merge request redactmanager/redaction-service!270
2024-02-05 14:34:57 +01:00
Andrei Isvoran 06eb4929a7 RED-8428 - Keep RESIZE for backwards compatibility for documine. RESIZE will... 2024-02-05 14:34:57 +01:00
Andrei Isvoran befd6f9a08 Merge branch 'RED-8428' into 'master'
RED-8428 - Add RESIZE_LOCALLY and RESIZE_IN_DICTIONARY in ManualRedactionType...

Closes RED-8428

See merge request redactmanager/redaction-service!269
2024-02-05 11:29:24 +01:00
Andrei Isvoran 053526d2da RED-8428 - Add RESIZE_LOCALLY and RESIZE_IN_DICTIONARY in ManualRedactionType... 2024-02-05 11:29:24 +01:00
Maverick Studer 1758dc1333 Merge branch 'RED-8424' into 'master'
RED-8424: Case-Sensitive Redaction Not Functioning Properly for Case-Sensitive Entities

Closes RED-8424

See merge request redactmanager/redaction-service!268
2024-02-05 09:59:50 +01:00
Maverick Studer a0d2430319 RED-8424: Case-Sensitive Redaction Not Functioning Properly for Case-Sensitive Entities 2024-02-05 09:59:50 +01:00
Dominique Eifländer b44e49b4d9 Merge branch 'RED-8171' into 'master'
RED-8171: Traces do not stop at @Async

Closes RED-8171

See merge request redactmanager/redaction-service!267
2024-02-02 13:44:09 +01:00
Dominique Eifländer ec2e359dd4 RED-8171: Traces do not stop at @Async 2024-02-02 13:34:23 +01:00
Andrei Isvoran 4d191d7bbd Merge branch 'RED-8347' into 'master'
RED-8347 - Add manual changes in entity log for removed entities

Closes RED-8347

See merge request redactmanager/redaction-service!266
2024-02-02 11:23:08 +01:00
Andrei Isvoran 930ad5b25e RED-8347 - Add manual changes in entity log for removed entities 2024-02-02 11:23:08 +01:00
Dominique Eifländer ce9ed6de9b Merge branch 'RED-8372' into 'master'
RED-8372: Include additional info about redactions in redaction annotations

Closes RED-8372

See merge request redactmanager/redaction-service!263
2024-02-02 11:11:30 +01:00
Maverick Studer 7be530b445 RED-8372: Include additional info about redactions in redaction annotations 2024-02-02 11:11:30 +01:00
Kilian Schüttler 7505766a83 Merge branch 'RED-7384' into 'master'
RED-7384: don't attempt to migrate id's that don't change, since...

Closes RED-7384

See merge request redactmanager/redaction-service!265
2024-02-02 10:26:38 +01:00
Kilian Schüttler 328a82835e RED-7384: don't attempt to migrate id's that don't change, since... 2024-02-02 10:26:38 +01:00
89 changed files with 10012 additions and 11987 deletions
+13
View File
@@ -21,3 +21,16 @@ deploy:
- if: $CI_COMMIT_BRANCH == $CI_DEFAULT_BRANCH
- if: $CI_COMMIT_BRANCH =~ /^release/
- if: $CI_COMMIT_TAG
pages:
stage: build
tags:
- dind
script:
- echo "Generating Javadoc..."
- gradle generateJavaDoc -PjavadocDestinationDir="javadoc"
- mkdir public
- mv redaction-service-v1/redaction-service-server-v1/javadoc/* public/
artifacts:
paths:
- public
@@ -7,7 +7,7 @@ description = "redaction-service-api-v1"
dependencies {
implementation("org.springframework:spring-web:6.0.12")
implementation("com.iqser.red.service:persistence-service-internal-api-v1:2.320.0")
implementation("com.iqser.red.service:persistence-service-internal-api-v1:2.351.0")
}
publishing {
@@ -0,0 +1,20 @@
package com.iqser.red.service.redaction.v1.model;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
import lombok.experimental.FieldDefaults;
@Data
@Builder
@AllArgsConstructor
@NoArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
public class DroolsSyntaxDeprecatedWarnings {
Integer line;
Integer column;
String message;
}
@@ -19,6 +19,8 @@ public class DroolsSyntaxValidation {
@Builder.Default
List<DroolsSyntaxErrorMessage> droolsSyntaxErrorMessages = new LinkedList<>();
@Builder.Default
List<DroolsSyntaxDeprecatedWarnings> droolsSyntaxDeprecatedWarnings = new LinkedList<>();
public void addErrorMessage(int line, int column, String message) {
@@ -1,7 +1,6 @@
package com.iqser.red.service.redaction.v1.model;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
import lombok.AllArgsConstructor;
import lombok.Builder;
@@ -12,11 +12,11 @@ plugins {
description = "redaction-service-server-v1"
val layoutParserVersion = "0.86.0"
val layoutParserVersion = "0.94.0"
val jacksonVersion = "2.15.2"
val droolsVersion = "9.44.0.Final"
val pdfBoxVersion = "3.0.0"
val persistenceServiceVersion = "2.324.0"
val persistenceServiceVersion = "2.360.0"
val springBootStarterVersion = "3.1.5"
configurations {
@@ -38,8 +38,8 @@ dependencies {
implementation("com.iqser.red.commons:dictionary-merge-commons:1.5.0")
implementation("com.iqser.red.commons:storage-commons:2.45.0")
implementation("com.knecon.fforesight:tenant-commons:0.19.0")
implementation("com.knecon.fforesight:tracing-commons:0.3.0")
implementation("com.knecon.fforesight:tenant-commons:0.21.0")
implementation("com.knecon.fforesight:tracing-commons:0.5.0")
implementation("com.fasterxml.jackson.module:jackson-module-afterburner:${jacksonVersion}")
implementation("com.fasterxml.jackson.datatype:jackson-datatype-jsr310:${jacksonVersion}")
@@ -60,11 +60,14 @@ dependencies {
implementation("net.logstash.logback:logstash-logback-encoder:7.4")
implementation("ch.qos.logback:logback-classic")
implementation("org.reflections:reflections:0.10.2")
testImplementation(project(":rules-management"))
testImplementation("org.apache.pdfbox:pdfbox:${pdfBoxVersion}")
testImplementation("org.apache.pdfbox:pdfbox-tools:${pdfBoxVersion}")
testImplementation("org.springframework.boot:spring-boot-starter-test:${springBootStarterVersion}")
testImplementation("com.knecon.fforesight:viewer-doc-processor:${layoutParserVersion}")
testImplementation("com.knecon.fforesight:layoutparser-service-processor:${layoutParserVersion}") {
exclude(
group = "com.iqser.red.service",
@@ -81,9 +84,6 @@ tasks.test {
maxHeapSize = "1024m"
}
tasks.named<BootBuildImage>("bootBuildImage") {
environment.put("BPE_DELIM_JAVA_TOOL_OPTIONS", " ")
@@ -110,3 +110,40 @@ tasks.named<BootBuildImage>("bootBuildImage") {
tags.set(listOf(dockerTag))
}
}
fun parseDroolsImports(droolsFilePath: String): List<String> {
val imports = mutableListOf<String>()
val importPattern = Regex("^import\\s+(com\\.iqser\\.red\\.service\\.redaction\\.v1\\.[\\w.]+);")
val desiredPrefix = "com.iqser.red.service.redaction.v1"
File(droolsFilePath).forEachLine { line ->
importPattern.find(line)?.let { matchResult ->
val importPath = matchResult.groupValues[1].trim()
if (importPath.startsWith(desiredPrefix)) {
val formattedPath = importPath.replace('.', '/')
imports.add("$formattedPath.java")
}
}
}
return imports
}
val droolsImports = parseDroolsImports("redaction-service-v1/redaction-service-server-v1/src/main/resources/drools/all_rules_documine.drl")
tasks.register("generateJavaDoc", Javadoc::class) {
dependsOn("compileJava")
dependsOn("delombok")
classpath = project.sourceSets["main"].runtimeClasspath
source = fileTree("${buildDir}/generated/sources/delombok/java/main") {
include(droolsImports)
}
destinationDir = file(project.findProperty("javadocDestinationDir")?.toString() ?: "")
options.memberLevel = JavadocMemberLevel.PUBLIC
(options as StandardJavadocDocletOptions).apply {
header = "Redaction Service ${project.version}"
footer = "Redaction Service ${project.version}"
title = "API Documentation for Redaction Service ${project.version}"
}
}
@@ -46,10 +46,18 @@ public class Application {
return new TimedAspect(registry);
}
@Bean
public DictionaryMergeService dictionaryMergeService() {
return new DictionaryMergeService();
}
@Bean(initMethod = "findDeprecatedMethods")
public DeprecatedElementsFinder deprecatedElementsFinder() {
return new DeprecatedElementsFinder();
}
}
@@ -0,0 +1,108 @@
package com.iqser.red.service.redaction.v1.server;
import static java.util.stream.Collectors.groupingBy;
import java.lang.reflect.Method;
import java.lang.reflect.Type;
import java.util.Arrays;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import org.reflections.Reflections;
import org.reflections.scanners.Scanners;
import org.reflections.util.ConfigurationBuilder;
import com.iqser.red.service.redaction.v1.server.model.dictionary.SearchImplementation;
import lombok.Getter;
import lombok.extern.slf4j.Slf4j;
@Slf4j
public class DeprecatedElementsFinder {
public static final String PACKAGE_NAME = "com.iqser.red.service.redaction.v1.server";
private Set<Method> deprecatedMethods;
@Getter
private Map<String, String> deprecatedMethodsSignaturesMap;
private Set<Class<?>> deprecatedClasses;
@Getter
private SearchImplementation classesSearchImplementation;
@Getter
private SearchImplementation methodsSearchImplementation;
public void findDeprecatedMethods() {
deprecatedMethods = new HashSet<>();
deprecatedClasses = new HashSet<>();
deprecatedMethodsSignaturesMap = new HashMap<>();
Reflections reflections = new Reflections(new ConfigurationBuilder().forPackage(PACKAGE_NAME)
.setExpandSuperTypes(true)
.setScanners(Scanners.MethodsAnnotated, Scanners.TypesAnnotated, Scanners.SubTypes));
deprecatedMethods = reflections.get(Scanners.MethodsAnnotated.with(Deprecated.class).as(Method.class));
deprecatedClasses = reflections.get(Scanners.TypesAnnotated.with(Deprecated.class).asClass());
if (!deprecatedClasses.isEmpty()) {
deprecatedClasses.forEach(deprecatedType -> deprecatedMethods.addAll(Arrays.stream(deprecatedType.getDeclaredMethods())
.collect(Collectors.toSet())));
classesSearchImplementation = new SearchImplementation(deprecatedClasses.stream()
.map(Class::getName)
.collect(Collectors.toSet()), false);
}
if (!deprecatedMethods.isEmpty()) {
methodsSearchImplementation = new SearchImplementation(deprecatedMethods.stream()
.map(Method::getName)
.collect(Collectors.toSet()), false);
deprecatedMethodsSignaturesMap = new HashMap<>();
Map<String, List<Method>> deprecatedMethodsNameMap = deprecatedMethods.stream()
.collect(groupingBy(Method::getName));
for (String deprecatedMethod : deprecatedMethodsNameMap.keySet()) {
deprecatedMethodsSignaturesMap.computeIfAbsent(deprecatedMethod,
key -> deprecatedMethodsNameMap.get(deprecatedMethod)
.stream()
.map(this::getMethodSignature)
.collect(Collectors.joining("\n")));
}
}
log.info("For package: {} found deprecated classes {} deprecated methods {}", PACKAGE_NAME, deprecatedClasses.size(), deprecatedMethods.size());
}
public Set<Method> getDeprecatedMethods() {
if (this.deprecatedMethods == null) {
findDeprecatedMethods();
}
return this.deprecatedMethods;
}
public Set<Class<?>> getDeprecatedClasses() {
if (this.deprecatedClasses == null) {
findDeprecatedMethods();
}
return this.deprecatedClasses;
}
private String getMethodSignature(Method method) {
String methodName = method.getName();
String parameterTypes = Arrays.stream(method.getGenericParameterTypes())
.map(Type::getTypeName)
.collect(Collectors.joining(", "));
return method.getGenericReturnType() + " " + methodName + "(" + parameterTypes + ")";
}
}
@@ -12,7 +12,6 @@ import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.AnnotationStatus;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualForceRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
@@ -43,10 +42,10 @@ public class LegacyRedactionLogMergeService {
private final DictionaryService dictionaryService;
public RedactionLog mergeManualChanges(RedactionLog redactionLog, ManualRedactions manualRedactions, String dossierTemplateId) {
public RedactionLog addManualAddEntriesAndRemoveSkippedImported(RedactionLog redactionLog, ManualRedactions manualRedactions, String dossierTemplateId) {
var skippedImportedRedactions = new HashSet<>();
log.info("Merging Redaction log with manual redactions");
Set<String> skippedImportedRedactions = new HashSet<>();
log.info("Adding manual add Entries and removing skipped or imported entries");
if (manualRedactions != null) {
var manualRedactionLogEntries = addManualAddEntries(manualRedactions.getEntriesToAdd(), redactionLog.getAnalysisNumber());
@@ -57,13 +56,14 @@ public class LegacyRedactionLogMergeService {
for (RedactionLogEntry entry : redactionLog.getRedactionLogEntry()) {
processRedactionLogEntry(manualRedactionWrappers.stream()
.filter(ManualRedactionWrapper::isApproved)
.filter(mr -> entry.getId().equals(mr.getId()))
.collect(Collectors.toList()), entry, dossierTemplateId);
if (entry.isImported() && !entry.isRedacted()) {
skippedImportedRedactions.add(entry.getId());
if (entry.isImported()) {
processRedactionLogEntry(manualRedactionWrappers.stream()
.filter(ManualRedactionWrapper::isApproved)
.filter(mr -> entry.getId().equals(mr.getId()))
.collect(Collectors.toList()), entry, dossierTemplateId);
if (!entry.isRedacted()) {
skippedImportedRedactions.add(entry.getId());
}
}
}
@@ -92,40 +92,49 @@ public class LegacyRedactionLogMergeService {
return redactionLog;
}
public long getNumberOfAffectedAnnotations(ManualRedactions manualRedactions) {
return createManualRedactionWrappers(manualRedactions).stream().map(ManualRedactionWrapper::getId).distinct().count();
}
private List<ManualRedactionWrapper> createManualRedactionWrappers(ManualRedactions manualRedactions) {
List<ManualRedactionWrapper> manualRedactionWrappers = new ArrayList<>();
manualRedactions.getRecategorizations().forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getRecategorizations()
.forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getIdsToRemove().forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getIdsToRemove()
.forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getForceRedactions().forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getForceRedactions()
.forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getLegalBasisChanges().forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getLegalBasisChanges()
.forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getResizeRedactions().forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getResizeRedactions()
.forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
Collections.sort(manualRedactionWrappers);
@@ -227,7 +236,7 @@ public class LegacyRedactionLogMergeService {
redactionLogEntry.getManualChanges()
.add(ManualChange.from(manualRemoval)
.withManualRedactionType(manualRemoval.isRemoveFromDictionary() ? ManualRedactionType.REMOVE_FROM_DICTIONARY : ManualRedactionType.REMOVE_LOCALLY));
.withManualRedactionType(manualRemoval.isRemoveFromDictionary() ? ManualRedactionType.REMOVE_FROM_DICTIONARY : ManualRedactionType.REMOVE_LOCALLY));
}
@@ -364,7 +373,9 @@ public class LegacyRedactionLogMergeService {
return false;
}
return (!manualRedactionEntry.isAddToDictionary() && !manualRedactionEntry.isAddToDossierDictionary()) || ((manualRedactionEntry.isAddToDictionary() || manualRedactionEntry.isAddToDossierDictionary()) && manualRedactionEntry.getProcessedDate() == null);
return (!manualRedactionEntry.isAddToDictionary() && !manualRedactionEntry.isAddToDossierDictionary()) || ((manualRedactionEntry.isAddToDictionary()
|| manualRedactionEntry.isAddToDossierDictionary())
&& manualRedactionEntry.getProcessedDate() == null);
}
@@ -0,0 +1,93 @@
package com.iqser.red.service.redaction.v1.server.migration;
import java.util.Collections;
import java.util.List;
import java.util.Set;
import java.util.stream.Collectors;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Change;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
public class MigrationMapper {
public static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change toEntityLogChanges(Change change) {
return new com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change(change.getAnalysisNumber(),
toEntityLogType(change.getType()),
change.getDateTime());
}
public static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange toEntityLogManualChanges(com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualChange manualChange) {
return new com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange(toManualRedactionType(manualChange.getManualRedactionType()),
manualChange.getProcessedDate(),
manualChange.getRequestedDate(),
manualChange.getUserId(),
manualChange.getPropertyChanges());
}
public static ChangeType toEntityLogType(com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ChangeType type) {
return switch (type) {
case ADDED -> ChangeType.ADDED;
case REMOVED -> ChangeType.REMOVED;
case CHANGED -> ChangeType.CHANGED;
};
}
public static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType toManualRedactionType(ManualRedactionType manualRedactionType) {
return switch (manualRedactionType) {
case ADD_LOCALLY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.ADD;
case ADD_TO_DICTIONARY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.ADD_TO_DICTIONARY;
case REMOVE_LOCALLY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.REMOVE;
case REMOVE_FROM_DICTIONARY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.REMOVE_FROM_DICTIONARY;
case FORCE_REDACT -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.FORCE;
case FORCE_HINT -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.FORCE;
case RECATEGORIZE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.RECATEGORIZE;
case LEGAL_BASIS_CHANGE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.LEGAL_BASIS_CHANGE;
case RESIZE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.RESIZE;
};
}
public static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine toEntityLogEngine(Engine engine) {
return switch (engine) {
case DICTIONARY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine.DICTIONARY;
case NER -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine.NER;
case RULE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine.RULE;
};
}
public static Set<com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine> getMigratedEngines(RedactionLogEntry entry) {
if (entry.getEngines() == null) {
return Collections.emptySet();
}
return entry.getEngines()
.stream()
.map(MigrationMapper::toEntityLogEngine)
.collect(Collectors.toSet());
}
public List<ManualChange> migrateManualChanges(List<com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualChange> manualChanges) {
if (manualChanges == null) {
return Collections.emptyList();
}
return manualChanges.stream()
.map(MigrationMapper::toEntityLogManualChanges)
.toList();
}
}
@@ -58,19 +58,28 @@ public class MigrationMessageReceiver {
if (redactionLog.getAnalysisVersion() == 0) {
redactionLog = legacyVersion0MigrationService.mergeDuplicateAnnotationIds(redactionLog);
} else if (migrationRequest.getManualRedactions() != null) {
redactionLog = legacyRedactionLogMergeService.mergeManualChanges(redactionLog, migrationRequest.getManualRedactions(), migrationRequest.getDossierTemplateId());
redactionLog = legacyRedactionLogMergeService.addManualAddEntriesAndRemoveSkippedImported(redactionLog,
migrationRequest.getManualRedactions(),
migrationRequest.getDossierTemplateId());
}
MigratedEntityLog migratedEntityLog = redactionLogToEntityLogMigrationService.migrate(redactionLog, document, migrationRequest.getDossierTemplateId());
MigratedEntityLog migratedEntityLog = redactionLogToEntityLogMigrationService.migrate(redactionLog,
document,
migrationRequest.getDossierTemplateId(),
migrationRequest.getManualRedactions(),
migrationRequest.getFileId());
log.info("Storing migrated entityLog and ids to migrate in DB for file {}", migrationRequest.getFileId());
redactionStorageService.storeObject(migrationRequest.getDossierId(), migrationRequest.getFileId(), FileType.ENTITY_LOG, migratedEntityLog.getEntityLog());
redactionStorageService.storeObject(migrationRequest.getDossierId(), migrationRequest.getFileId(), FileType.MIGRATED_IDS, migratedEntityLog.getMigratedIds());
sendFinished(MigrationResponse.builder().dossierId(migrationRequest.getDossierId()).fileId(migrationRequest.getFileId()).build());
log.info("Migrated {} redactionLog entries for dossierId {} and fileId {}",
migratedEntityLog.getEntityLog().getEntityLogEntry().size(),
migrationRequest.getDossierId(),
migrationRequest.getFileId());
log.info("Migrated {} redactionLog entries, found {} annotation ids for migration in the db, {} new manual entries, for dossierId {} and fileId {}",
migratedEntityLog.getEntityLog().getEntityLogEntry().size(),
migratedEntityLog.getMigratedIds().getMappings().size(),
migratedEntityLog.getMigratedIds().getManualRedactionEntriesToAdd().size(),
migrationRequest.getDossierId(),
migrationRequest.getFileId());
log.info("");
}
@@ -2,6 +2,7 @@ package com.iqser.red.service.redaction.v1.server.migration;
import java.awt.geom.Rectangle2D;
import java.util.Collection;
import java.util.Collections;
import java.util.Comparator;
import java.util.LinkedList;
import java.util.List;
@@ -16,27 +17,26 @@ import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogLegalBasis;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.migration.MigratedIds;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogLegalBasis;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.MigratedEntityLog;
import com.iqser.red.service.redaction.v1.server.model.MigrationEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.RectangleWithPage;
import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Image;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.ImageType;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityCreationService;
import com.iqser.red.service.redaction.v1.server.service.ManualChangesApplicationService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityEnrichmentService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityFindingUtility;
import com.iqser.red.service.redaction.v1.server.service.document.EntityFromPrecursorCreationService;
import com.iqser.red.service.redaction.v1.server.utils.IdBuilder;
import com.iqser.red.service.redaction.v1.server.utils.MigratedIdsCollector;
@@ -56,13 +56,19 @@ public class RedactionLogToEntityLogMigrationService {
EntityFindingUtility entityFindingUtility;
EntityEnrichmentService entityEnrichmentService;
DictionaryService dictionaryService;
ManualChangesApplicationService manualChangesApplicationService;
public MigratedEntityLog migrate(RedactionLog redactionLog, Document document, String dossierTemplateId) {
public MigratedEntityLog migrate(RedactionLog redactionLog, Document document, String dossierTemplateId, ManualRedactions manualRedactions, String fileId) {
List<MigrationEntity> entitiesToMigrate = calculateMigrationEntitiesFromRedactionLog(redactionLog, document, dossierTemplateId);
MigratedIds migratedIds = entitiesToMigrate.stream().collect(new MigratedIdsCollector());
MigratedIds idsToMigrateInDb = entitiesToMigrate.stream().filter(MigrationEntity::hasManualChangesOrComments).collect(new MigratedIdsCollector());
log.info("Migrating entities for file {}", fileId);
List<MigrationEntity> entitiesToMigrate = calculateMigrationEntitiesFromRedactionLog(redactionLog, document, dossierTemplateId, fileId);
MigratedIds migratedIds = entitiesToMigrate.stream()
.collect(new MigratedIdsCollector());
applyManualChanges(entitiesToMigrate, manualRedactions);
log.info("applying manual changes to migrated entities for file {}", fileId);
EntityLog entityLog = new EntityLog();
entityLog.setAnalysisNumber(redactionLog.getAnalysisNumber());
@@ -71,34 +77,77 @@ public class RedactionLogToEntityLogMigrationService {
entityLog.setDossierDictionaryVersion(redactionLog.getDossierDictionaryVersion());
entityLog.setLegalBasisVersion(redactionLog.getLegalBasisVersion());
entityLog.setAnalysisVersion(redactionLog.getAnalysisVersion());
entityLog.setLegalBasis(redactionLog.getLegalBasis().stream().map(RedactionLogToEntityLogMigrationService::toEntityLogLegalBasis).toList());
entityLog.setLegalBasis(redactionLog.getLegalBasis()
.stream()
.map(RedactionLogToEntityLogMigrationService::toEntityLogLegalBasis)
.toList());
Map<String, String> oldToNewIDMapping = migratedIds.buildOldToNewMapping();
entityLog.setEntityLogEntry(entitiesToMigrate.stream().map(migrationEntity -> migrationEntity.toEntityLogEntry(oldToNewIDMapping)).toList());
log.info("Writing migrated entities to entityLog for file {}", fileId);
entityLog.setEntityLogEntry(entitiesToMigrate.stream()
.map(migrationEntity -> migrationEntity.toEntityLogEntry(oldToNewIDMapping))
.toList());
if (getNumberOfApprovedEntries(redactionLog) != entityLog.getEntityLogEntry().size()) {
String message = String.format("Not all entities have been found during the migration redactionLog has %d entries and new entityLog %d",
redactionLog.getRedactionLogEntry().size(),
entityLog.getEntityLogEntry().size());
redactionLog.getRedactionLogEntry().size(),
entityLog.getEntityLogEntry().size());
log.error(message);
throw new AssertionError(message);
}
MigratedIds idsToMigrateInDb = entitiesToMigrate.stream()
.filter(MigrationEntity::hasManualChangesOrComments)
.filter(m -> !m.getOldId().equals(m.getNewId()))
.collect(new MigratedIdsCollector());
List<ManualRedactionEntry> manualRedactionEntriesToAdd = entitiesToMigrate.stream()
.filter(MigrationEntity::needsManualEntry)
.map(MigrationEntity::buildManualRedactionEntry)
.toList();
idsToMigrateInDb.setManualRedactionEntriesToAdd(manualRedactionEntriesToAdd);
return new MigratedEntityLog(idsToMigrateInDb, entityLog);
}
private void applyManualChanges(List<MigrationEntity> entitiesToMigrate, ManualRedactions manualRedactions) {
if (manualRedactions == null) {
return;
}
Map<String, List<BaseAnnotation>> manualChangesPerAnnotationId = Stream.of(manualRedactions.getIdsToRemove(),
manualRedactions.getEntriesToAdd(),
manualRedactions.getForceRedactions(),
manualRedactions.getResizeRedactions(),
manualRedactions.getLegalBasisChanges(),
manualRedactions.getRecategorizations())
.flatMap(Collection::stream)
.collect(Collectors.groupingBy(BaseAnnotation::getAnnotationId));
entitiesToMigrate.forEach(migrationEntity -> migrationEntity.applyManualChanges(manualChangesPerAnnotationId.getOrDefault(migrationEntity.getOldId(),
Collections.emptyList()),
manualChangesApplicationService));
}
private static long getNumberOfApprovedEntries(RedactionLog redactionLog) {
return redactionLog.getRedactionLogEntry().size();
}
private List<MigrationEntity> calculateMigrationEntitiesFromRedactionLog(RedactionLog redactionLog, Document document, String dossierTemplateId) {
private List<MigrationEntity> calculateMigrationEntitiesFromRedactionLog(RedactionLog redactionLog, Document document, String dossierTemplateId, String fileId) {
List<MigrationEntity> images = getImageBasedMigrationEntities(redactionLog, document, dossierTemplateId);
List<MigrationEntity> textMigrationEntities = getTextBasedMigrationEntities(redactionLog, document, dossierTemplateId);
return Stream.of(textMigrationEntities.stream(), images.stream()).flatMap(Function.identity()).toList();
List<MigrationEntity> images = getImageBasedMigrationEntities(redactionLog, document, fileId);
List<MigrationEntity> textMigrationEntities = getTextBasedMigrationEntities(redactionLog, document, dossierTemplateId, fileId);
return Stream.of(textMigrationEntities.stream(), images.stream())
.flatMap(Function.identity())
.toList();
}
@@ -108,20 +157,28 @@ public class RedactionLogToEntityLogMigrationService {
}
private List<MigrationEntity> getImageBasedMigrationEntities(RedactionLog redactionLog, Document document, String dossierTemplateId) {
private List<MigrationEntity> getImageBasedMigrationEntities(RedactionLog redactionLog, Document document, String fileId) {
List<Image> images = document.streamAllImages().collect(Collectors.toList());
List<Image> images = document.streamAllImages()
.collect(Collectors.toList());
List<RedactionLogEntry> redactionLogImages = redactionLog.getRedactionLogEntry().stream().filter(RedactionLogEntry::isImage).toList();
List<RedactionLogEntry> redactionLogImages = redactionLog.getRedactionLogEntry()
.stream()
.filter(RedactionLogEntry::isImage)
.toList();
List<MigrationEntity> migrationEntities = new LinkedList<>();
for (RedactionLogEntry redactionLogImage : redactionLogImages) {
List<RectangleWithPage> imagePositions = redactionLogImage.getPositions().stream().map(RectangleWithPage::fromRedactionLogRectangle).toList();
List<RectangleWithPage> imagePositions = redactionLogImage.getPositions()
.stream()
.map(RectangleWithPage::fromRedactionLogRectangle)
.toList();
assert imagePositions.size() == 1;
Optional<Image> optionalClosestImage = images.stream()
.filter(image -> image.onPage(redactionLogImage.getPositions().get(0).getPage()))
.min(Comparator.comparingDouble(image -> entityFindingUtility.calculateDistance(image.getPosition(), imagePositions.get(0).rectangle2D())))
.filter(image -> entityFindingUtility.calculateDistance(image.getPosition(), imagePositions.get(0).rectangle2D()) <= MATCH_THRESHOLD);
.filter(image -> image.onPage(redactionLogImage.getPositions()
.get(0).getPage()))
.min(Comparator.comparingDouble(image -> EntityFindingUtility.calculateDistance(image.getPosition(), imagePositions.get(0).rectangle2D())))
.filter(image -> EntityFindingUtility.calculateDistance(image.getPosition(), imagePositions.get(0).rectangle2D()) <= MATCH_THRESHOLD);
Image closestImage;
if (optionalClosestImage.isEmpty()) { // if no fitting image can be found create a new one with the previous values!
@@ -132,6 +189,8 @@ public class RedactionLogToEntityLogMigrationService {
}
String ruleIdentifier;
String reason = Optional.ofNullable(redactionLogImage.getReason())
.orElse("");
if (redactionLogImage.getMatchedRule().isBlank() || redactionLogImage.getMatchedRule() == null) {
ruleIdentifier = "OLDIMG.0.0";
} else {
@@ -139,13 +198,13 @@ public class RedactionLogToEntityLogMigrationService {
}
if (redactionLogImage.lastChangeIsRemoved()) {
closestImage.remove(ruleIdentifier, redactionLogImage.getReason());
closestImage.remove(ruleIdentifier, reason);
} else if (redactionLogImage.isRedacted()) {
closestImage.apply(ruleIdentifier, redactionLogImage.getReason(), redactionLogImage.getLegalBasis());
closestImage.apply(ruleIdentifier, reason, redactionLogImage.getLegalBasis());
} else {
closestImage.skip(ruleIdentifier, redactionLogImage.getReason());
closestImage.skip(ruleIdentifier, reason);
}
migrationEntities.add(new MigrationEntity(null, redactionLogImage, closestImage, redactionLogImage.getId(), closestImage.getId()));
migrationEntities.add(MigrationEntity.fromRedactionLogImage(redactionLogImage, closestImage, fileId));
}
return migrationEntities;
}
@@ -157,13 +216,24 @@ public class RedactionLogToEntityLogMigrationService {
.documentTree(document.getDocumentTree())
.imageType(ImageType.fromString(redactionLogImage.getType()))
.transparent(redactionLogImage.isImageHasTransparency())
.page(document.getPages().stream().filter(p -> p.getNumber() == redactionLogImage.getPositions().get(0).getPage()).findFirst().orElseThrow())
.position(toRectangle2D(redactionLogImage.getPositions().get(0)))
.page(document.getPages()
.stream()
.filter(p -> p.getNumber() == redactionLogImage.getPositions()
.get(0).getPage())
.findFirst()
.orElseThrow())
.position(toRectangle2D(redactionLogImage.getPositions()
.get(0)))
.build();
List<Integer> treeId = document.getDocumentTree().createNewMainEntryAndReturnId(image);
image.setTreeId(treeId);
image.setId(IdBuilder.buildId(image.getPages(), image.getBBox().values().stream().toList(), "", ""));
image.setId(IdBuilder.buildId(image.getPages(),
image.getBBox().values()
.stream()
.toList(),
"",
""));
return image;
}
@@ -175,85 +245,46 @@ public class RedactionLogToEntityLogMigrationService {
}
private List<MigrationEntity> getTextBasedMigrationEntities(RedactionLog redactionLog, Document document, String dossierTemplateId) {
private List<MigrationEntity> getTextBasedMigrationEntities(RedactionLog redactionLog, Document document, String dossierTemplateId, String fileId) {
List<MigrationEntity> entitiesToMigrate = redactionLog.getRedactionLogEntry()
.stream()
.filter(redactionLogEntry -> !redactionLogEntry.isImage())
.map(entry -> MigrationEntity.fromRedactionLogEntry(entry, dictionaryService.isHint(entry.getType(), dossierTemplateId)))
.peek(migrationEntity -> {
if (migrationEntity.getManualEntity().getEntityType().equals(EntityType.HINT) &&//
!migrationEntity.getRedactionLogEntry().isHint() &&//
!migrationEntity.getRedactionLogEntry().isRedacted()) {
migrationEntity.getManualEntity().ignore(migrationEntity.getManualEntity().getRuleIdentifier(), migrationEntity.getRedactionLogEntry().getReason());
} else if (migrationEntity.getRedactionLogEntry().lastChangeIsRemoved()) {
migrationEntity.getManualEntity().remove(migrationEntity.getManualEntity().getRuleIdentifier(), migrationEntity.getRedactionLogEntry().getReason());
} else if (lastManualChangeIsRemove(migrationEntity)) {
migrationEntity.getManualEntity().ignore(migrationEntity.getManualEntity().getRuleIdentifier(), migrationEntity.getManualEntity().getReason());
} else if (migrationEntity.getManualEntity().isApplied() && migrationEntity.getRedactionLogEntry().isRecommendation()) {
migrationEntity.getManualEntity().skip(migrationEntity.getManualEntity().getRuleIdentifier(), migrationEntity.getManualEntity().getReason());
} else if (migrationEntity.getManualEntity().isApplied()) {
migrationEntity.getManualEntity()
.apply(migrationEntity.getManualEntity().getRuleIdentifier(),
migrationEntity.getManualEntity().getReason(),
migrationEntity.getManualEntity().getLegalBasis());
} else {
migrationEntity.getManualEntity().skip(migrationEntity.getManualEntity().getRuleIdentifier(), migrationEntity.getManualEntity().getReason());
}
})
.map(entry -> MigrationEntity.fromRedactionLogEntry(entry, dictionaryService.isHint(entry.getType(), dossierTemplateId), fileId))
.toList();
Map<String, List<TextEntity>> tempEntitiesByValue = entityFindingUtility.findAllPossibleEntitiesAndGroupByValue(document,
entitiesToMigrate.stream().map(MigrationEntity::getManualEntity).toList());
List<PrecursorEntity> precursorEntities = entitiesToMigrate.stream()
.map(MigrationEntity::getPrecursorEntity)
.toList();
log.info("Finding all possible entities");
Map<String, List<TextEntity>> tempEntitiesByValue = entityFindingUtility.findAllPossibleEntitiesAndGroupByValue(document, precursorEntities);
for (MigrationEntity migrationEntity : entitiesToMigrate) {
Optional<TextEntity> optionalTextEntity = entityFindingUtility.findClosestEntityAndReturnEmptyIfNotFound(migrationEntity.getManualEntity(),
tempEntitiesByValue,
MATCH_THRESHOLD);
Optional<TextEntity> optionalTextEntity = entityFindingUtility.findClosestEntityAndReturnEmptyIfNotFound(migrationEntity.getPrecursorEntity(),
tempEntitiesByValue,
MATCH_THRESHOLD);
if (optionalTextEntity.isEmpty()) {
migrationEntity.setMigratedEntity(migrationEntity.getManualEntity());
migrationEntity.setOldId(migrationEntity.getManualEntity().getId());
migrationEntity.setNewId(migrationEntity.getManualEntity().getId());
migrationEntity.setMigratedEntity(migrationEntity.getPrecursorEntity());
migrationEntity.setOldId(migrationEntity.getPrecursorEntity().getId());
migrationEntity.setNewId(migrationEntity.getPrecursorEntity().getId());
continue;
}
TextEntity entity = createCorrectEntity(migrationEntity.getManualEntity(), document, optionalTextEntity.get().getTextRange());
migrationEntity.setMigratedEntity(entity);
migrationEntity.setOldId(migrationEntity.getManualEntity().getId());
migrationEntity.setNewId(entity.getPositionsOnPagePerPage().get(0).getId()); // Can only be on one page, since redactionLogEntries can only be on one page
TextEntity migratedEntity = EntityFromPrecursorCreationService.createCorrectEntity(migrationEntity.getPrecursorEntity(), optionalTextEntity.get(), true);
migrationEntity.setMigratedEntity(migratedEntity);
migrationEntity.setOldId(migrationEntity.getPrecursorEntity().getId());
migrationEntity.setNewId(migratedEntity.getId());
}
tempEntitiesByValue.values().stream().flatMap(Collection::stream).forEach(TextEntity::removeFromGraph);
tempEntitiesByValue.values()
.stream()
.flatMap(Collection::stream)
.forEach(TextEntity::removeFromGraph);
return entitiesToMigrate;
}
private static boolean lastManualChangeIsRemove(MigrationEntity migrationEntity) {
if (migrationEntity.getRedactionLogEntry().getManualChanges() == null) {
return false;
}
return migrationEntity.getRedactionLogEntry()
.getManualChanges()
.stream()
.reduce((a, b) -> b)
.map(m -> m.getManualRedactionType().equals(ManualRedactionType.REMOVE_LOCALLY))
.orElse(false);
}
private TextEntity createCorrectEntity(ManualEntity manualEntity, SemanticNode node, TextRange closestTextRange) {
EntityCreationService entityCreationService = new EntityCreationService(entityEnrichmentService);
TextEntity correctEntity = entityCreationService.forceByTextRange(closestTextRange, manualEntity.getType(), manualEntity.getEntityType(), node);
correctEntity.addMatchedRules(manualEntity.getMatchedRuleList());
correctEntity.setDictionaryEntry(manualEntity.isDictionaryEntry());
correctEntity.setDossierDictionaryEntry(manualEntity.isDossierDictionaryEntry());
correctEntity.getManualOverwrite().addChanges(manualEntity.getManualOverwrite().getManualChangeLog());
return correctEntity;
}
}
@@ -1,7 +1,10 @@
package com.iqser.red.service.redaction.v1.server.model;
import java.util.List;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.migration.MigratedIds;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import lombok.AllArgsConstructor;
import lombok.Builder;
@@ -16,5 +19,4 @@ public class MigratedEntityLog {
MigratedIds migratedIds;
EntityLog entityLog;
}
@@ -1,66 +1,121 @@
package com.iqser.red.service.redaction.v1.server.model;
import static com.iqser.red.service.redaction.v1.server.service.EntityLogCreatorService.buildEntryState;
import static com.iqser.red.service.redaction.v1.server.service.EntityLogCreatorService.buildEntryType;
import java.awt.geom.Rectangle2D;
import java.util.Collections;
import java.util.LinkedList;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.Optional;
import java.util.Set;
import java.util.stream.Collectors;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryState;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Change;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.server.migration.MigrationMapper;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.IEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.ManualChangeOverwrite;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Image;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.ImageType;
import com.iqser.red.service.redaction.v1.server.service.ManualChangeFactory;
import com.iqser.red.service.redaction.v1.server.service.ManualChangesApplicationService;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Data
@Builder
@AllArgsConstructor
@RequiredArgsConstructor
public final class MigrationEntity {
private final ManualEntity manualEntity;
private final PrecursorEntity precursorEntity;
private final RedactionLogEntry redactionLogEntry;
private IEntity migratedEntity;
private String oldId;
private String newId;
private String fileId;
@Builder.Default
List<BaseAnnotation> manualChanges = new LinkedList<>();
public static MigrationEntity fromRedactionLogEntry(RedactionLogEntry redactionLogEntry, boolean hint) {
public static MigrationEntity fromRedactionLogEntry(RedactionLogEntry redactionLogEntry, boolean hint, String fileId) {
return new MigrationEntity(createManualEntity(redactionLogEntry, hint), redactionLogEntry);
PrecursorEntity precursorEntity = createPrecursorEntity(redactionLogEntry, hint);
if (precursorEntity.getEntityType().equals(EntityType.HINT) && !redactionLogEntry.isHint() && !redactionLogEntry.isRedacted()) {
precursorEntity.ignore(precursorEntity.getRuleIdentifier(), precursorEntity.getReason());
} else if (redactionLogEntry.lastChangeIsRemoved()) {
precursorEntity.remove(precursorEntity.getRuleIdentifier(), precursorEntity.getReason());
} else if (lastManualChangeIsRemove(redactionLogEntry)) {
precursorEntity.ignore(precursorEntity.getRuleIdentifier(), precursorEntity.getReason());
} else if (precursorEntity.isApplied() && redactionLogEntry.isRecommendation()) {
precursorEntity.skip(precursorEntity.getRuleIdentifier(), precursorEntity.getReason());
} else if (precursorEntity.isApplied()) {
precursorEntity.apply(precursorEntity.getRuleIdentifier(), precursorEntity.getReason(), precursorEntity.getLegalBasis());
} else {
precursorEntity.skip(precursorEntity.getRuleIdentifier(), precursorEntity.getReason());
}
return MigrationEntity.builder().precursorEntity(precursorEntity).redactionLogEntry(redactionLogEntry).oldId(redactionLogEntry.getId()).fileId(fileId).build();
}
public static ManualEntity createManualEntity(RedactionLogEntry redactionLogEntry, boolean hint) {
public static MigrationEntity fromRedactionLogImage(RedactionLogEntry redactionLogImage, Image image, String fileId) {
return MigrationEntity.builder().redactionLogEntry(redactionLogImage).migratedEntity(image).oldId(redactionLogImage.getId()).newId(image.getId()).fileId(fileId).build();
}
private static boolean lastManualChangeIsRemove(RedactionLogEntry redactionLogEntry) {
if (redactionLogEntry.getManualChanges() == null) {
return false;
}
return redactionLogEntry.getManualChanges()
.stream()
.reduce((a, b) -> b)
.map(m -> m.getManualRedactionType().equals(ManualRedactionType.REMOVE_LOCALLY))
.orElse(false);
}
public static PrecursorEntity createPrecursorEntity(RedactionLogEntry redactionLogEntry, boolean hint) {
String ruleIdentifier = buildRuleIdentifier(redactionLogEntry);
List<RectangleWithPage> rectangleWithPages = redactionLogEntry.getPositions().stream().map(RectangleWithPage::fromRedactionLogRectangle).toList();
List<RectangleWithPage> rectangleWithPages = redactionLogEntry.getPositions()
.stream()
.map(RectangleWithPage::fromRedactionLogRectangle)
.toList();
EntityType entityType = getEntityType(redactionLogEntry, hint);
return ManualEntity.builder()
return PrecursorEntity.builder()
.id(redactionLogEntry.getId())
.value(redactionLogEntry.getValue())
.entityPosition(rectangleWithPages)
.ruleIdentifier(ruleIdentifier)
.reason(redactionLogEntry.getReason())
.reason(Optional.ofNullable(redactionLogEntry.getReason())
.orElse(""))
.legalBasis(redactionLogEntry.getLegalBasis())
.type(redactionLogEntry.getType())
.section(redactionLogEntry.getSection())
.engines(MigrationMapper.getMigratedEngines(redactionLogEntry))
.entityType(entityType)
.applied(redactionLogEntry.isRedacted())
.isDictionaryEntry(redactionLogEntry.isDictionaryEntry())
@@ -101,14 +156,6 @@ public final class MigrationEntity {
}
private static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change toEntityLogChanges(Change change) {
return new com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change(change.getAnalysisNumber(),
toEntityLogType(change.getType()),
change.getDateTime());
}
private static EntryType getEntryType(EntityType entityType) {
return switch (entityType) {
@@ -121,42 +168,6 @@ public final class MigrationEntity {
}
private static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange toEntityLogManualChanges(ManualChange manualChange) {
return new com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange(toManualRedactionType(manualChange.getManualRedactionType()),
manualChange.getProcessedDate(),
manualChange.getRequestedDate(),
manualChange.getUserId(),
manualChange.getPropertyChanges());
}
private static ChangeType toEntityLogType(com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ChangeType type) {
return switch (type) {
case ADDED -> ChangeType.ADDED;
case REMOVED -> ChangeType.REMOVED;
case CHANGED -> ChangeType.CHANGED;
};
}
private static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType toManualRedactionType(ManualRedactionType manualRedactionType) {
return switch (manualRedactionType) {
case ADD_LOCALLY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.ADD_LOCALLY;
case ADD_TO_DICTIONARY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.ADD_TO_DICTIONARY;
case REMOVE_LOCALLY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.REMOVE_LOCALLY;
case REMOVE_FROM_DICTIONARY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.REMOVE_FROM_DICTIONARY;
case FORCE_REDACT -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.FORCE_REDACT;
case FORCE_HINT -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.FORCE_HINT;
case RECATEGORIZE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.RECATEGORIZE;
case LEGAL_BASIS_CHANGE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.LEGAL_BASIS_CHANGE;
case RESIZE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.RESIZE;
};
}
public EntityLogEntry toEntityLogEntry(Map<String, String> oldToNewIdMapping) {
EntityLogEntry entityLogEntry;
@@ -164,17 +175,21 @@ public final class MigrationEntity {
entityLogEntry = createEntityLogEntry(image);
} else if (migratedEntity instanceof TextEntity textEntity) {
entityLogEntry = createEntityLogEntry(textEntity);
} else if (migratedEntity instanceof ManualEntity entity) {
} else if (migratedEntity instanceof PrecursorEntity entity) {
entityLogEntry = createEntityLogEntry(entity);
} else {
throw new UnsupportedOperationException("Unknown subclass " + migratedEntity.getClass());
}
entityLogEntry.setChanges(redactionLogEntry.getChanges().stream().map(MigrationEntity::toEntityLogChanges).toList());
entityLogEntry.setManualChanges(migrateManualChanges(redactionLogEntry.getManualChanges()));
entityLogEntry.setManualChanges(ManualChangeFactory.toManualChangeList(migratedEntity.getManualOverwrite().getManualChangeLog(), redactionLogEntry.isHint()));
entityLogEntry.setColor(redactionLogEntry.getColor());
entityLogEntry.setChanges(redactionLogEntry.getChanges()
.stream()
.map(MigrationMapper::toEntityLogChanges)
.toList());
entityLogEntry.setReference(migrateSetOfIds(redactionLogEntry.getReference(), oldToNewIdMapping));
entityLogEntry.setImportedRedactionIntersections(migrateSetOfIds(redactionLogEntry.getImportedRedactionIntersections(), oldToNewIdMapping));
entityLogEntry.setEngines(getMigratedEngines(redactionLogEntry));
entityLogEntry.setEngines(MigrationMapper.getMigratedEngines(redactionLogEntry));
if (redactionLogEntry.getLegalBasis() != null) {
entityLogEntry.setLegalBasis(redactionLogEntry.getLegalBasis());
}
@@ -192,65 +207,38 @@ public final class MigrationEntity {
return entityLogEntry.getManualChanges()
.stream()
.reduce((a, b) -> b)
.filter(mc -> mc.getManualRedactionType()
.equals(com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.REMOVE_LOCALLY))
.filter(mc -> mc.getManualRedactionType().equals(com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.REMOVE))
.isPresent();
}
private List<com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange> migrateManualChanges(List<ManualChange> manualChanges) {
if (manualChanges == null) {
return Collections.emptyList();
}
return manualChanges.stream()
.map(MigrationEntity::toEntityLogManualChanges)
.toList();
}
private static Set<com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine> getMigratedEngines(RedactionLogEntry entry) {
if (entry.getEngines() == null) {
return Collections.emptySet();
}
return entry.getEngines().stream().map(MigrationEntity::toEntityLogEngine).collect(Collectors.toSet());
}
private Set<String> migrateSetOfIds(Set<String> ids, Map<String, String> oldToNewIdMapping) {
if (ids == null) {
return Collections.emptySet();
}
return ids.stream().map(oldToNewIdMapping::get).collect(Collectors.toSet());
}
private static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine toEntityLogEngine(Engine engine) {
return switch (engine) {
case DICTIONARY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine.DICTIONARY;
case NER -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine.NER;
case RULE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine.RULE;
};
return ids.stream()
.map(oldToNewIdMapping::get)
.collect(Collectors.toSet());
}
public EntityLogEntry createEntityLogEntry(Image image) {
String imageType = image.getImageType().equals(ImageType.OTHER) ? "image" : image.getImageType().toString().toLowerCase(Locale.ENGLISH);
List<Position> positions = getPositionsFromOverride(image).orElse(List.of(new Position(image.getPosition(), image.getPage().getNumber())));
return EntityLogEntry.builder()
.id(image.getId())
.value(image.value())
.type(imageType)
.type(image.type())
.reason(image.buildReasonWithManualChangeDescriptions())
.legalBasis(image.legalBasis())
.matchedRule(image.getMatchedRule().getRuleIdentifier().toString())
.dictionaryEntry(false)
.positions(List.of(new Position(image.getPosition(), image.getPage().getNumber())))
.positions(positions)
.containingNodeId(image.getTreeId())
.closestHeadline(image.getHeadline().getTextBlock().getSearchText())
.section(redactionLogEntry.getSection())
.section(image.getManualOverwrite().getSection()
.orElse(redactionLogEntry.getSection()))
.textAfter(redactionLogEntry.getTextAfter())
.textBefore(redactionLogEntry.getTextBefore())
.imageHasTransparency(image.isTransparent())
@@ -261,33 +249,32 @@ public final class MigrationEntity {
}
public EntityLogEntry createEntityLogEntry(ManualEntity manualEntity) {
public EntityLogEntry createEntityLogEntry(PrecursorEntity precursorEntity) {
String type = manualEntity.getManualOverwrite().getType().orElse(manualEntity.getType());
return EntityLogEntry.builder()
.id(manualEntity.getId())
.reason(manualEntity.buildReasonWithManualChangeDescriptions())
.legalBasis(manualEntity.legalBasis())
.value(manualEntity.value())
.type(type)
.state(buildEntryState(manualEntity))
.entryType(buildEntryType(manualEntity))
.section(redactionLogEntry.getSection())
.id(precursorEntity.getId())
.reason(precursorEntity.buildReasonWithManualChangeDescriptions())
.legalBasis(precursorEntity.legalBasis())
.value(precursorEntity.value())
.type(precursorEntity.type())
.state(buildEntryState(precursorEntity))
.entryType(buildEntryType(precursorEntity))
.section(precursorEntity.getManualOverwrite().getSection()
.orElse(redactionLogEntry.getSection()))
.textAfter(redactionLogEntry.getTextAfter())
.textBefore(redactionLogEntry.getTextBefore())
.containingNodeId(Collections.emptyList())
.closestHeadline("")
.matchedRule(manualEntity.getMatchedRule().getRuleIdentifier().toString())
.dictionaryEntry(manualEntity.isDictionaryEntry())
.dossierDictionaryEntry(manualEntity.isDossierDictionaryEntry())
.matchedRule(precursorEntity.getMatchedRule().getRuleIdentifier().toString())
.dictionaryEntry(precursorEntity.isDictionaryEntry())
.dossierDictionaryEntry(precursorEntity.isDossierDictionaryEntry())
.startOffset(-1)
.endOffset(-1)
.positions(manualEntity.getManualOverwrite()
.getPositions()
.orElse(manualEntity.getEntityPosition())
.stream()
.map(entityPosition -> new Position(entityPosition.rectangle2D(), entityPosition.pageNumber()))
.toList())
.positions(precursorEntity.getManualOverwrite().getPositions()
.orElse(precursorEntity.getEntityPosition())
.stream()
.map(entityPosition -> new Position(entityPosition.rectangle2D(), entityPosition.pageNumber()))
.toList())
.engines(Collections.emptySet())
.build();
}
@@ -296,21 +283,19 @@ public final class MigrationEntity {
public EntityLogEntry createEntityLogEntry(TextEntity entity) {
assert entity.getPositionsOnPagePerPage().size() == 1;
PositionOnPage positionOnPage = entity.getPositionsOnPagePerPage().get(0);
List<Position> rectanglesPerLine = positionOnPage.getRectanglePerLine()
.stream()
.map(rectangle2D -> new Position(rectangle2D, positionOnPage.getPage().getNumber()))
.toList();
List<Position> rectanglesPerLine = getRectanglesPerLine(entity);
return EntityLogEntry.builder()
.id(positionOnPage.getId())
.id(entity.getId())
.positions(rectanglesPerLine)
.reason(entity.buildReasonWithManualChangeDescriptions())
.legalBasis(entity.legalBasis())
.value(entity.getManualOverwrite().getValue().orElse(entity.getMatchedRule().isWriteValueWithLineBreaks() ? entity.getValueWithLineBreaks() : entity.getValue()))
.value(entity.getManualOverwrite().getValue()
.orElse(entity.getMatchedRule().isWriteValueWithLineBreaks() ? entity.getValueWithLineBreaks() : entity.getValue()))
.type(entity.type())
.section(redactionLogEntry.getSection())
.textAfter(redactionLogEntry.getTextAfter())
.textBefore(redactionLogEntry.getTextBefore())
.section(entity.getManualOverwrite().getSection()
.orElse(redactionLogEntry.getSection()))
.textAfter(entity.getTextAfter())
.textBefore(entity.getTextBefore())
.containingNodeId(entity.getDeepestFullyContainingNode().getTreeId())
.closestHeadline(entity.getDeepestFullyContainingNode().getHeadline().getTextBlock().getSearchText())
.matchedRule(entity.getMatchedRule().getRuleIdentifier().toString())
@@ -325,40 +310,132 @@ public final class MigrationEntity {
}
private EntryState buildEntryState(IEntity entity) {
private static List<Position> getRectanglesPerLine(TextEntity entity) {
if (entity.applied() && entity.active()) {
return EntryState.APPLIED;
} else if (entity.skipped() && entity.active()) {
return EntryState.SKIPPED;
} else if (entity.ignored()) {
return EntryState.IGNORED;
} else {
return EntryState.REMOVED;
}
return getPositionsFromOverride(entity).orElse(entity.getPositionsOnPagePerPage()
.get(0).getRectanglePerLine()
.stream()
.map(rectangle2D -> new Position(rectangle2D,
entity.getPositionsOnPagePerPage()
.get(0).getPage().getNumber()))
.toList());
}
private EntryType buildEntryType(IEntity entity) {
private static Optional<List<Position>> getPositionsFromOverride(IEntity entity) {
if (entity instanceof TextEntity textEntity) {
return getEntryType(textEntity.getEntityType());
} else if (entity instanceof ManualEntity manualEntity) {
if (manualEntity.isRectangle()) {
return EntryType.AREA;
}
return getEntryType(manualEntity.getEntityType());
} else if (entity instanceof Image) {
return EntryType.IMAGE;
}
throw new UnsupportedOperationException(String.format("Entity subclass %s is not implemented!", entity.getClass()));
return entity.getManualOverwrite().getPositions()
.map(rects -> rects.stream()
.map(r -> new Position(r.rectangle2D(), r.pageNumber()))
.toList());
}
public boolean hasManualChangesOrComments() {
return !(redactionLogEntry.getManualChanges() == null || redactionLogEntry.getManualChanges().isEmpty()) || //
!(redactionLogEntry.getComments() == null || redactionLogEntry.getComments().isEmpty());
!(redactionLogEntry.getComments() == null || redactionLogEntry.getComments().isEmpty()) //
|| hasManualChanges();
}
public boolean hasManualChanges() {
return !manualChanges.isEmpty();
}
public void applyManualChanges(List<BaseAnnotation> manualChangesToApply, ManualChangesApplicationService manualChangesApplicationService) {
manualChanges.addAll(manualChangesToApply);
manualChangesToApply.forEach(manualChange -> {
if (manualChange instanceof ManualResizeRedaction manualResizeRedaction && migratedEntity instanceof TextEntity textEntity) {
// Due to the value in the old redaction log already being resized, there is no way to find the original entity ID and therefore to migrate the resize annotation correctly.
// Instead, we add an add_locally change to the db.
ManualResizeRedaction migratedManualResizeRedaction = ManualResizeRedaction.builder()
.positions(manualResizeRedaction.getPositions())
.annotationId(getNewId())
.updateDictionary(manualResizeRedaction.getUpdateDictionary())
.addToAllDossiers(manualResizeRedaction.isAddToAllDossiers())
.textAfter(manualResizeRedaction.getTextAfter())
.textBefore(manualResizeRedaction.getTextBefore())
.build();
manualChangesApplicationService.resize(textEntity, migratedManualResizeRedaction);
} else {
migratedEntity.getManualOverwrite().addChange(manualChange);
}
});
}
public ManualRedactionEntry buildManualRedactionEntry() {
assert hasManualChanges();
// currently we need to insert a manual redaction entry, whenever an entity has been resized.
String user = manualChanges.stream()
.filter(mc -> mc instanceof ManualResizeRedaction)
.findFirst()
.orElse(manualChanges.get(0)).getUser();
return ManualRedactionEntry.builder()
.annotationId(newId)
.fileId(fileId)
.type(redactionLogEntry.getType())
.value(redactionLogEntry.getValue())
.reason(redactionLogEntry.getReason())
.legalBasis(redactionLogEntry.getLegalBasis())
.section(redactionLogEntry.getSection())
.addToDictionary(false)
.addToDossierDictionary(false)
.rectangle(false)
.positions(buildPositions(migratedEntity))
.user(user)
.build();
}
private List<Rectangle> buildPositions(IEntity entity) {
if (entity instanceof TextEntity textEntity) {
var positionsOnPage = textEntity.getPositionsOnPagePerPage()
.get(0);
return positionsOnPage.getRectanglePerLine()
.stream()
.map(p -> new Rectangle((float) p.getX(), (float) p.getY(), (float) p.getWidth(), (float) p.getHeight(), positionsOnPage.getPage().getNumber()))
.toList();
}
if (entity instanceof PrecursorEntity pEntity) {
return pEntity.getManualOverwrite().getPositions()
.orElse(pEntity.getEntityPosition())
.stream()
.map(p -> new Rectangle((float) p.rectangle2D().getX(),
(float) p.rectangle2D().getY(),
(float) p.rectangle2D().getWidth(),
(float) p.rectangle2D().getHeight(),
p.pageNumber()))
.toList();
}
if (entity instanceof Image image) {
Rectangle2D position = image.getManualOverwrite().getPositions()
.map(p -> p.get(0).rectangle2D())
.orElse(image.getPosition());
return List.of(new Rectangle((float) position.getX(), (float) position.getY(), (float) position.getWidth(), (float) position.getHeight(), image.getPage().getNumber()));
} else {
throw new UnsupportedOperationException();
}
}
public boolean needsManualEntry() {
return manualChanges.stream()
.anyMatch(mc -> mc instanceof ManualResizeRedaction && !((ManualResizeRedaction) mc).getUpdateDictionary()) && !(migratedEntity instanceof Image);
}
}
@@ -1,11 +1,17 @@
package com.iqser.red.service.redaction.v1.server.model;
import static com.iqser.red.service.redaction.v1.server.service.NotFoundImportedEntitiesService.IMPORTED_REDACTION_TYPE;
import java.util.List;
import java.util.Optional;
import java.util.PriorityQueue;
import java.util.Set;
import java.util.UUID;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
@@ -25,7 +31,7 @@ import lombok.experimental.FieldDefaults;
@AllArgsConstructor
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
@SuppressWarnings("PMD.AvoidFieldNameMatchingMethodName")
public class ManualEntity implements IEntity {
public class PrecursorEntity implements IEntity {
// The id must be mapped into a TextEntity as is for comments to work correctly
String id;
@@ -41,19 +47,24 @@ public class ManualEntity implements IEntity {
boolean isDictionaryEntry;
boolean isDossierDictionaryEntry;
boolean rectangle;
Set<Engine> engines;
@Builder.Default
PriorityQueue<MatchedRule> matchedRuleList = new PriorityQueue<>();
ManualChangeOverwrite manualOverwrite;
public static ManualEntity fromManualRedactionEntry(ManualRedactionEntry manualRedactionEntry, boolean hint) {
public static PrecursorEntity fromManualRedactionEntry(ManualRedactionEntry manualRedactionEntry, boolean hint) {
List<RectangleWithPage> rectangleWithPages = manualRedactionEntry.getPositions()
.stream()
.map(RectangleWithPage::fromAnnotationRectangle)
.toList();
List<RectangleWithPage> rectangleWithPages = manualRedactionEntry.getPositions().stream().map(RectangleWithPage::fromAnnotationRectangle).toList();
var entityType = hint ? EntityType.HINT : EntityType.ENTITY;
ManualChangeOverwrite manualChangeOverwrite = new ManualChangeOverwrite(entityType);
manualChangeOverwrite.addChange(manualRedactionEntry);
return ManualEntity.builder()
return PrecursorEntity.builder()
.id(manualRedactionEntry.getAnnotationId())
.value(manualRedactionEntry.getValue())
.entityPosition(rectangleWithPages)
@@ -68,15 +79,19 @@ public class ManualEntity implements IEntity {
.isDossierDictionaryEntry(false)
.rectangle(manualRedactionEntry.isRectangle())
.manualOverwrite(manualChangeOverwrite)
.engines(Set.of(Engine.MANUAL))
.build();
}
public static ManualEntity fromEntityLogEntry(EntityLogEntry entityLogEntry) {
public static PrecursorEntity fromEntityLogEntry(EntityLogEntry entityLogEntry) {
List<RectangleWithPage> rectangleWithPages = entityLogEntry.getPositions().stream().map(RectangleWithPage::fromEntityLogPosition).toList();
List<RectangleWithPage> rectangleWithPages = entityLogEntry.getPositions()
.stream()
.map(RectangleWithPage::fromEntityLogPosition)
.toList();
EntityType entityType = getEntityType(entityLogEntry.getEntryType());
return ManualEntity.builder()
return PrecursorEntity.builder()
.id(entityLogEntry.getId())
.value(entityLogEntry.getValue())
.entityPosition(rectangleWithPages)
@@ -89,14 +104,49 @@ public class ManualEntity implements IEntity {
.isDictionaryEntry(entityLogEntry.isDictionaryEntry())
.isDossierDictionaryEntry(entityLogEntry.isDossierDictionaryEntry())
.manualOverwrite(new ManualChangeOverwrite(entityType))
.engines(entityLogEntry.getEngines())
.build();
}
public static ManualEntity fromManualResizeRedaction(ManualResizeRedaction manualResizeRedaction) {
public static PrecursorEntity fromImportedEntry(ImportedRedaction importedRedaction) {
List<RectangleWithPage> rectangleWithPages = manualResizeRedaction.getPositions().stream().map(RectangleWithPage::fromAnnotationRectangle).toList();
return ManualEntity.builder()
List<RectangleWithPage> rectangleWithPages = importedRedaction.getPositions()
.stream()
.map(RectangleWithPage::fromEntityLogPosition)
.toList();
EntryType entryType = Optional.ofNullable(importedRedaction.getEntryType())
.orElse(EntryType.ENTITY);
EntityType entityType = getEntityType(entryType);
String value = Optional.ofNullable(importedRedaction.getValue())
.orElse("");
return PrecursorEntity.builder()
.id(importedRedaction.getId())
.value(value)
.entityPosition(rectangleWithPages)
.reason(Optional.ofNullable(importedRedaction.getReason())
.orElse(""))
.legalBasis(Optional.ofNullable(importedRedaction.getLegalBasis())
.orElse(""))
.type(Optional.ofNullable(importedRedaction.getType())
.orElse(IMPORTED_REDACTION_TYPE))
.entityType(entityType)
.isDictionaryEntry(false)
.isDossierDictionaryEntry(false)
.rectangle(value.isBlank() || entryType.equals(EntryType.IMAGE) || entryType.equals(EntryType.IMAGE_HINT) || entryType.equals(EntryType.AREA))
.manualOverwrite(new ManualChangeOverwrite(entityType))
.engines(Set.of(Engine.IMPORTED))
.build();
}
public static PrecursorEntity fromManualResizeRedaction(ManualResizeRedaction manualResizeRedaction) {
List<RectangleWithPage> rectangleWithPages = manualResizeRedaction.getPositions()
.stream()
.map(RectangleWithPage::fromAnnotationRectangle)
.toList();
return PrecursorEntity.builder()
.id(UUID.randomUUID().toString())
.value(manualResizeRedaction.getValue())
.entityPosition(rectangleWithPages)
@@ -116,7 +166,8 @@ public class ManualEntity implements IEntity {
@Override
public String type() {
return getManualOverwrite().getType().orElse(type);
return getManualOverwrite().getType()
.orElse(type);
}
@@ -141,10 +192,4 @@ public class ManualEntity implements IEntity {
}
}
private EntityType getEntityType(boolean isHint) {
return isHint ? EntityType.HINT : EntityType.ENTITY;
}
}
@@ -27,12 +27,12 @@ import lombok.experimental.FieldDefaults;
public class ManualChangeOverwrite {
private static final Map<Class<? extends BaseAnnotation>, String> MANUAL_CHANGE_DESCRIPTIONS = Map.of(//
ManualRedactionEntry.class, "created by manual change", //
ManualLegalBasisChange.class, "legal basis was manually changed", //
ManualResizeRedaction.class, "resized by manual override", //
ManualForceRedaction.class, "forced by manual override", //
IdRemoval.class, "removed by manual override", //
ManualRecategorization.class, "recategorized by manual override");
ManualRedactionEntry.class, "created by manual change", //
ManualLegalBasisChange.class, "legal basis was manually changed", //
ManualResizeRedaction.class, "resized by manual override", //
ManualForceRedaction.class, "forced by manual override", //
IdRemoval.class, "removed by manual override", //
ManualRecategorization.class, "recategorized by manual override");
List<BaseAnnotation> manualChanges = new LinkedList<>();
boolean changed;
@@ -80,7 +80,8 @@ public class ManualChangeOverwrite {
manualChanges.sort(Comparator.comparing(BaseAnnotation::getRequestDate));
updateFields(manualChanges);
// make list unmodifiable.
return manualChanges.stream().toList();
return manualChanges.stream()
.toList();
}
@@ -121,14 +122,18 @@ public class ManualChangeOverwrite {
resized = true;
// This is only for not found Manual Entities.
value = manualResizeRedaction.getValue();
positions = manualResizeRedaction.getPositions().stream().map(RectangleWithPage::fromAnnotationRectangle).toList();
positions = manualResizeRedaction.getPositions()
.stream()
.map(RectangleWithPage::fromAnnotationRectangle)
.toList();
}
if (manualChange instanceof ManualRecategorization recategorization) {
// recategorization logic happens in ManualChangesApplicationService.
recategorized = true;
// this is only relevant for ManualEntities. Image and TextEntity is recategorized in the ManualChangesApplicationService.
type = recategorization.getType();
if (recategorization.getLegalBasis() != null && !recategorization.getLegalBasis().isEmpty()) {
legalBasis = recategorization.getLegalBasis();
}
}
descriptions.add(MANUAL_CHANGE_DESCRIPTIONS.get(manualChange.getClass()));
@@ -24,7 +24,8 @@ public final class MatchedRule implements Comparable<MatchedRule> {
public static final RuleType FINAL_TYPE = RuleType.fromString("FINAL");
public static final RuleType ELIMINATION_RULE_TYPE = RuleType.fromString("X");
private static final List<RuleType> RULE_TYPE_PRIORITIES = List.of(FINAL_TYPE, ELIMINATION_RULE_TYPE);
public static final RuleType IMPORTED_TYPE = RuleType.fromString("IMP");
private static final List<RuleType> RULE_TYPE_PRIORITIES = List.of(FINAL_TYPE, ELIMINATION_RULE_TYPE, IMPORTED_TYPE);
RuleIdentifier ruleIdentifier;
@Builder.Default
@@ -14,6 +14,7 @@ import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlockCollector;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -33,6 +34,8 @@ public class Document implements GenericSemanticNode {
@EqualsAndHashCode.Include
List<Integer> treeId = Collections.emptyList();
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
Set<Page> pages;
DocumentTree documentTree;
@@ -9,6 +9,7 @@ import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -27,6 +28,8 @@ import lombok.experimental.FieldDefaults;
public class Footer implements GenericSemanticNode {
final static SectionIdentifier sectionIdentifier = SectionIdentifier.empty();
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
@@ -9,6 +9,7 @@ import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -27,6 +28,8 @@ import lombok.experimental.FieldDefaults;
public class Header implements GenericSemanticNode {
final static SectionIdentifier sectionIdentifier = SectionIdentifier.empty();
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
@@ -10,6 +10,7 @@ import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.AtomicTextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -27,6 +28,8 @@ import lombok.experimental.FieldDefaults;
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Headline implements GenericSemanticNode {
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
TextBlock leafTextBlock;
@@ -18,6 +18,7 @@ import com.iqser.red.service.redaction.v1.server.model.document.entity.MatchedRu
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlockCollector;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -35,6 +36,9 @@ import lombok.experimental.FieldDefaults;
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Image implements GenericSemanticNode, IEntity {
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
String id;
@@ -70,7 +74,9 @@ public class Image implements GenericSemanticNode, IEntity {
@Override
public TextBlock getTextBlock() {
return streamAllSubNodes().filter(SemanticNode::isLeaf).map(SemanticNode::getLeafTextBlock).collect(new TextBlockCollector());
return streamAllSubNodes().filter(SemanticNode::isLeaf)
.map(SemanticNode::getLeafTextBlock)
.collect(new TextBlockCollector());
}
@@ -91,7 +97,8 @@ public class Image implements GenericSemanticNode, IEntity {
@Override
public String type() {
return getManualOverwrite().getType().orElse(imageType.toString());
return getManualOverwrite().getType()
.orElse(imageType.toString());
}
@@ -124,6 +131,32 @@ public class Image implements GenericSemanticNode, IEntity {
}
public boolean mostlyContainedBy(Image image, double containmentThreshold) {
Map<Page, Rectangle2D> bboxImage = image.getBBox();
Map<Page, Rectangle2D> bbox = this.getBBox();
//image needs to be on the same page
if(bboxImage.get(this.page) != null) {
Rectangle2D intersection = bboxImage.get(this.page).createIntersection(bbox.get(this.page));
double calculatedIntersection = intersection.getWidth() * intersection.getHeight();
double area = bbox.get(this.page).getWidth() * bbox.get(this.page).getHeight();
return (calculatedIntersection / area) > containmentThreshold;
}
return false;
}
public boolean mostlyContains(Image image, double containmentThreshold) {
Map<Page, Rectangle2D> bboxImage = image.getBBox();
Map<Page, Rectangle2D> bbox = this.getBBox();
Rectangle2D intersection = bbox.get(this.page).createIntersection(bboxImage.get(this.page));
double calculatedIntersection = intersection.getWidth() * intersection.getHeight();
double area = bbox.get(this.page).getWidth() * bbox.get(this.page).getHeight();
return (area / calculatedIntersection) > containmentThreshold;
}
public int length() {
return 0;
@@ -6,10 +6,22 @@ public enum ImageType {
LOGO,
FORMULA,
SIGNATURE,
OTHER,
OTHER {
@Override
public String toString() {
return "image";
}
},
OCR;
public String toString() {
return name().toLowerCase(Locale.ENGLISH);
}
public static ImageType fromString(String imageType) {
return switch (imageType.toLowerCase(Locale.ROOT)) {
@@ -9,6 +9,7 @@ import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -24,6 +25,9 @@ import lombok.experimental.FieldDefaults;
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Paragraph implements GenericSemanticNode {
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
TextBlock leafTextBlock;
@@ -10,12 +10,14 @@ import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntit
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlockCollector;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.EqualsAndHashCode;
import lombok.RequiredArgsConstructor;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@@ -26,6 +28,7 @@ import lombok.extern.slf4j.Slf4j;
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Section implements GenericSemanticNode {
@EqualsAndHashCode.Include
List<Integer> treeId;
@@ -37,6 +40,9 @@ public class Section implements GenericSemanticNode {
Map<Page, Rectangle2D> bBoxCache;
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@Override
public NodeType getType() {
@@ -22,6 +22,7 @@ import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBl
import com.iqser.red.service.redaction.v1.server.service.document.NodeVisitor;
import com.iqser.red.service.redaction.v1.server.utils.RectangleTransformations;
import com.iqser.red.service.redaction.v1.server.utils.RedactionSearchUtility;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
public interface SemanticNode {
@@ -356,6 +357,13 @@ public interface SemanticNode {
return getTextBlock().getSearchText().contains(string);
}
Set<LayoutEngine> getEngines();
default void addEngine(LayoutEngine engine) {
getEngines().add(engine);
}
/**
* Checks whether this SemanticNode contains all the provided Strings.
@@ -554,7 +562,6 @@ public interface SemanticNode {
if (textBlock.containsTextRange(textEntity.getTextRange())) {
textEntity.setDeepestFullyContainingNode(this);
}
textEntity.addIntersectingNode(this);
streamChildren().filter(semanticNode -> semanticNode.getTextRange().intersects(textEntity.getTextRange()))
.forEach(node -> node.addThisToEntityIfIntersects(textEntity));
@@ -9,6 +9,7 @@ import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import java.util.stream.IntStream;
import java.util.stream.Stream;
@@ -16,6 +17,7 @@ import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlockCollector;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -31,6 +33,8 @@ import lombok.experimental.FieldDefaults;
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Table implements SemanticNode {
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
DocumentTree documentTree;
@@ -64,8 +68,7 @@ public class Table implements SemanticNode {
*/
public Stream<TextEntity> streamEntitiesWhereRowContainsStringsIgnoreCase(List<String> strings) {
return IntStream.range(0, numberOfRows)
.boxed()
return IntStream.range(0, numberOfRows).boxed()
.filter(row -> rowContainsStringsIgnoreCase(row, strings))
.flatMap(this::streamRow)
.map(TableCell::getEntities)
@@ -82,8 +85,11 @@ public class Table implements SemanticNode {
*/
public boolean rowContainsStringsIgnoreCase(Integer row, List<String> strings) {
String rowText = streamRow(row).map(TableCell::getTextBlock).collect(new TextBlockCollector()).getSearchText().toLowerCase(Locale.ROOT);
return strings.stream().map(String::toLowerCase).allMatch(rowText::contains);
String rowText = streamRow(row).map(TableCell::getTextBlock)
.collect(new TextBlockCollector()).getSearchText().toLowerCase(Locale.ROOT);
return strings.stream()
.map(String::toLowerCase)
.allMatch(rowText::contains);
}
@@ -96,9 +102,13 @@ public class Table implements SemanticNode {
*/
public Stream<TextEntity> streamEntitiesWhereRowHasHeaderAndValue(String header, String value) {
List<Integer> vertebrateStudyCols = streamHeaders().filter(headerNode -> headerNode.containsString(header)).map(TableCell::getCol).toList();
List<Integer> vertebrateStudyCols = streamHeaders().filter(headerNode -> headerNode.containsString(header))
.map(TableCell::getCol)
.toList();
return streamTableCells().filter(tableCellNode -> vertebrateStudyCols.stream()
.anyMatch(vertebrateStudyCol -> getCell(tableCellNode.getRow(), vertebrateStudyCol).containsString(value))).map(TableCell::getEntities).flatMap(Collection::stream);
.anyMatch(vertebrateStudyCol -> getCell(tableCellNode.getRow(), vertebrateStudyCol).containsString(value)))
.map(TableCell::getEntities)
.flatMap(Collection::stream);
}
@@ -111,9 +121,13 @@ public class Table implements SemanticNode {
*/
public Stream<TextEntity> streamEntitiesWhereRowHasHeaderAndAnyValue(String header, List<String> values) {
List<Integer> colsWithHeader = streamHeaders().filter(headerNode -> headerNode.containsString(header)).map(TableCell::getCol).toList();
List<Integer> colsWithHeader = streamHeaders().filter(headerNode -> headerNode.containsString(header))
.map(TableCell::getCol)
.toList();
return streamTableCells().filter(tableCellNode -> colsWithHeader.stream()
.anyMatch(colWithHeader -> getCell(tableCellNode.getRow(), colWithHeader).containsAnyString(values))).map(TableCell::getEntities).flatMap(Collection::stream);
.anyMatch(colWithHeader -> getCell(tableCellNode.getRow(), colWithHeader).containsAnyString(values)))
.map(TableCell::getEntities)
.flatMap(Collection::stream);
}
@@ -126,16 +140,33 @@ public class Table implements SemanticNode {
*/
public Stream<TextEntity> streamEntitiesWhereRowContainsEntitiesOfType(List<String> types) {
List<Integer> rowsWithEntityOfType = getEntities().stream()
.filter(TextEntity::active)
.filter(redactionEntity -> types.stream().anyMatch(type -> type.equals(redactionEntity.type())))
.map(TextEntity::getIntersectingNodes)
.filter(node -> node instanceof TableCell)
.map(node -> (TableCell) node)
.map(TableCell::getRow)
.toList();
return IntStream.range(0, numberOfRows).boxed()
.filter(rowNumber -> streamTextEntitiesInRow(rowNumber).map(TextEntity::type)
.anyMatch(types::contains))
.flatMap(this::streamRow)
.map(TableCell::getEntities)
.flatMap(Collection::stream);
}
return rowsWithEntityOfType.stream().flatMap(this::streamRow).map(TableCell::getEntities).flatMap(Collection::stream);
/**
* Streams all entities in this table, that appear in a row, which contains at least one entity of each of the provided types.
* Ignores Entity with ignored == true or removed == true.
*
* @param types type strings to check whether a row contains an entity like them
* @return Stream of all entities in this table, that appear in a row, which contains at least one entity of each of the provided types.
*/
public Stream<TextEntity> streamEntitiesWhereRowContainsEntitiesOfEachType(List<String> types) {
return IntStream.range(0, numberOfRows).boxed()
.filter(rowNumber -> {
Set<String> entityTypes = streamTextEntitiesInRow(rowNumber).map(TextEntity::type)
.collect(Collectors.toSet());
return entityTypes.containsAll(types);
})
.flatMap(this::streamRow)
.map(TableCell::getEntities)
.flatMap(Collection::stream);
}
@@ -148,18 +179,43 @@ public class Table implements SemanticNode {
*/
public Stream<TextEntity> streamEntitiesWhereRowContainsNoEntitiesOfType(List<String> types) {
return IntStream.range(0, numberOfRows)
.boxed()
.filter(rowNumber -> streamRow(rowNumber).map(TableCell::getEntities)
.flatMap(Collection::stream)
.filter(TextEntity::active)
.noneMatch(entity -> types.contains(entity.type())))
return IntStream.range(0, numberOfRows).boxed()
.filter(rowNumber -> streamTextEntitiesInRow(rowNumber).map(TextEntity::type)
.noneMatch(types::contains))
.flatMap(this::streamRow)
.map(TableCell::getEntities)
.flatMap(Collection::stream);
}
/**
* Streams all Entities in the given row.
*
* @param rowNumber the row number to look for
* @return stream of TextEntities occurring in row
*/
public Stream<TextEntity> streamTextEntitiesInRow(int rowNumber) {
return streamRow(rowNumber).map(TableCell::getEntities)
.flatMap(Collection::stream)
.filter(TextEntity::active);
}
/**
* Streams all Entities in the given col.
*
* @param colNumber the column number to look for
* @return stream of TextEntities occurring in row
*/
public Stream<TextEntity> streamTextEntitiesInCol(int colNumber) {
return streamCol(colNumber).map(TableCell::getEntities)
.flatMap(Collection::stream)
.filter(TextEntity::active);
}
/**
* Returns a TableCell at the provided row and column location.
*
@@ -173,7 +229,8 @@ public class Table implements SemanticNode {
throw new IllegalArgumentException(format("row %d, col %d is out of bounds for number of rows of %d and number of cols %d", row, col, numberOfRows, numberOfCols));
}
int idx = row * numberOfCols + col;
return (TableCell) documentTree.getEntryById(treeId).getChildren().get(idx).getNode();
return (TableCell) documentTree.getEntryById(treeId).getChildren()
.get(idx).getNode();
}
@@ -196,7 +253,7 @@ public class Table implements SemanticNode {
*/
public Stream<TableCell> streamTableCellsWhichContainType(String type) {
return streamTableCells().filter(tableCell -> tableCell.getEntities().stream().filter(TextEntity::active).anyMatch(entity -> entity.type().equals(type)));
return streamTableCells().filter(tableCell -> tableCell.hasEntitiesOfType(type));
}
@@ -222,7 +279,8 @@ public class Table implements SemanticNode {
*/
public Stream<TableCell> streamCol(int col) {
return IntStream.range(0, numberOfRows).boxed().map(row -> getCell(row, col));
return IntStream.range(0, numberOfRows).boxed()
.map(row -> getCell(row, col));
}
@@ -234,7 +292,8 @@ public class Table implements SemanticNode {
*/
public Stream<TableCell> streamRow(int row) {
return IntStream.range(0, numberOfCols).boxed().map(col -> getCell(row, col));
return IntStream.range(0, numberOfCols).boxed()
.map(col -> getCell(row, col));
}
@@ -258,7 +317,8 @@ public class Table implements SemanticNode {
*/
public Stream<TableCell> streamHeadersForCell(int row, int col) {
return Stream.concat(streamRow(row), streamCol(col)).filter(TableCell::isHeader);
return Stream.concat(streamRow(row), streamCol(col))
.filter(TableCell::isHeader);
}
@@ -348,7 +408,9 @@ public class Table implements SemanticNode {
public TextBlock getTextBlock() {
if (textBlock == null) {
textBlock = streamAllSubNodes().filter(SemanticNode::isLeaf).map(SemanticNode::getLeafTextBlock).collect(new TextBlockCollector());
textBlock = streamAllSubNodes().filter(SemanticNode::isLeaf)
.map(SemanticNode::getLeafTextBlock)
.collect(new TextBlockCollector());
}
return textBlock;
}
@@ -11,6 +11,7 @@ import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntit
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlockCollector;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -26,6 +27,9 @@ import lombok.experimental.FieldDefaults;
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class TableCell implements GenericSemanticNode {
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
int row;
@@ -1,11 +1,13 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.util.Collection;
import java.util.Collections;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import java.util.stream.Stream;
import org.springframework.stereotype.Service;
import org.springframework.web.bind.annotation.RequestBody;
@@ -18,6 +20,7 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.RuleFileTyp
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.componentlog.ComponentLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogChanges;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.dossier.file.FileType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.legalbasis.LegalBasis;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
@@ -28,7 +31,7 @@ import com.iqser.red.service.redaction.v1.server.RedactionServiceSettings;
import com.iqser.red.service.redaction.v1.server.client.LegalBasisClient;
import com.iqser.red.service.redaction.v1.server.client.model.NerEntitiesModel;
import com.iqser.red.service.redaction.v1.server.model.KieWrapper;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.NerEntities;
import com.iqser.red.service.redaction.v1.server.model.component.Component;
import com.iqser.red.service.redaction.v1.server.model.dictionary.Dictionary;
@@ -37,6 +40,7 @@ import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryVers
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.service.document.DocumentGraphMapper;
import com.iqser.red.service.redaction.v1.server.service.document.ImportedRedactionEntryService;
import com.iqser.red.service.redaction.v1.server.service.document.ManualRedactionEntryService;
import com.iqser.red.service.redaction.v1.server.service.document.NerEntitiesAdapter;
import com.iqser.red.service.redaction.v1.server.service.document.SectionFinderService;
@@ -65,18 +69,15 @@ public class AnalyzeService {
ComponentDroolsExecutionService componentDroolsExecutionService;
KieContainerCreationService kieContainerCreationService;
DictionarySearchService dictionarySearchService;
RedactionLogCreatorService redactionLogCreatorService;
EntityLogCreatorService entityLogCreatorService;
ComponentLogCreatorService componentLogCreatorService;
RedactionStorageService redactionStorageService;
RedactionChangeLogService redactionChangeLogService;
LegalBasisClient legalBasisClient;
RedactionServiceSettings redactionServiceSettings;
ImportedRedactionService importedRedactionService;
NotFoundImportedEntitiesService notFoundImportedEntitiesService;
SectionFinderService sectionFinderService;
ManualRedactionEntryService manualRedactionEntryService;
ImportedRedactionEntryService importedRedactionEntryService;
ObservedStorageService observedStorageService;
FunctionTimerValues redactmanagerAnalyzePagewiseValues;
@@ -86,55 +87,60 @@ public class AnalyzeService {
public AnalyzeResult reanalyze(@RequestBody AnalyzeRequest analyzeRequest) {
long startTime = System.currentTimeMillis();
RedactionLog previousRedactionLog = redactionStorageService.getRedactionLog(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
EntityLog previousEntityLog = redactionStorageService.getEntityLog(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
log.info("Loaded previous entity log for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
Document document = DocumentGraphMapper.toDocumentGraph(observedStorageService.getDocumentData(analyzeRequest.getDossierId(), analyzeRequest.getFileId()));
log.info("Loaded Document Graph for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
ImportedRedactions importedRedactions = redactionStorageService.getImportedRedactions(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
log.info("Loaded Imported Redactions for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
// not yet ready for reanalysis
if (previousEntityLog == null || document == null || document.getNumberOfPages() == 0) {
return analyze(analyzeRequest);
}
DictionaryIncrement dictionaryIncrement = dictionaryService.getDictionaryIncrements(analyzeRequest.getDossierTemplateId(),
new DictionaryVersion(previousEntityLog.getDictionaryVersion(), previousEntityLog.getDossierDictionaryVersion()),
analyzeRequest.getDossierId());
new DictionaryVersion(previousEntityLog.getDictionaryVersion(),
previousEntityLog.getDossierDictionaryVersion()),
analyzeRequest.getDossierId());
Set<Integer> sectionsToReanalyseIds = getSectionsToReanalyseIds(analyzeRequest, previousEntityLog, document, dictionaryIncrement);
Set<Integer> sectionsToReanalyseIds = getSectionsToReanalyseIds(analyzeRequest, previousEntityLog, document, dictionaryIncrement, importedRedactions);
List<SemanticNode> sectionsToReAnalyse = getSectionsToReAnalyse(document, sectionsToReanalyseIds);
log.info("{} Sections to reanalyze found for file {} in dossier {}", sectionsToReanalyseIds.size(), analyzeRequest.getFileId(), analyzeRequest.getDossierId());
if (sectionsToReAnalyse.isEmpty()) {
// do this only to update the imported redactions with unprocessed manual changes if there are changes
importedRedactionService.processImportedRedactions(previousEntityLog, analyzeRequest);
EntityLogChanges entityLogChanges = entityLogCreatorService.updateVersionsAndReturnChanges(previousEntityLog,
dictionaryIncrement.getDictionaryVersion(),
analyzeRequest,
false);
dictionaryIncrement.getDictionaryVersion(),
analyzeRequest,
false);
return finalizeAnalysis(analyzeRequest,
startTime,
kieContainerCreationService.getLatestKieContainer(analyzeRequest.getDossierTemplateId(), RuleFileType.COMPONENT),
entityLogChanges,
document,
previousRedactionLog,
document.getNumberOfPages(),
dictionaryIncrement.getDictionaryVersion(),
true,
Collections.emptySet());
startTime,
kieContainerCreationService.getLatestKieContainer(analyzeRequest.getDossierTemplateId(), RuleFileType.COMPONENT),
entityLogChanges,
document,
document.getNumberOfPages(),
dictionaryIncrement.getDictionaryVersion(),
true,
Collections.emptySet());
}
KieWrapper kieWrapperEntityRules = kieContainerCreationService.getLatestKieContainer(analyzeRequest.getDossierTemplateId(), RuleFileType.ENTITY);
log.info("Updated entity rules to version {} for file {} in dossier {}", kieWrapperEntityRules.rulesVersion(), analyzeRequest.getFileId(), analyzeRequest.getDossierId());
NerEntities nerEntities = getEntityRecognitionEntitiesFilteredBySectionIds(analyzeRequest, document, sectionsToReanalyseIds);
log.info("Loaded Ner Entities for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
List<ManualEntity> notFoundManualRedactionEntries = manualRedactionEntryService.addManualRedactionEntriesAndReturnNotFoundEntries(analyzeRequest,
document,
analyzeRequest.getDossierTemplateId());
var notFoundManualRedactionEntries = manualRedactionEntryService.addManualRedactionEntriesAndReturnNotFoundEntries(analyzeRequest,
document,
analyzeRequest.getDossierTemplateId());
var notFoundImportedEntries = importedRedactionEntryService.addImportedEntriesAndReturnNotFoundEntries(analyzeRequest, importedRedactions, document);
var notFoundManualOrImportedEntries = Stream.of(notFoundManualRedactionEntries, notFoundImportedEntries)
.flatMap(Collection::stream)
.collect(Collectors.toList());
Dictionary dictionary = dictionaryService.getDeepCopyDictionary(analyzeRequest.getDossierTemplateId(), analyzeRequest.getDossierId());
log.info("Updated Dictionaries for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
@@ -142,33 +148,34 @@ public class AnalyzeService {
dictionarySearchService.addDictionaryEntities(dictionary, sectionsToReAnalyse);
log.info("Finished Dictionary Search for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
// we could add the imported redactions similar to the manual redactions here as well for additional processing
List<FileAttribute> allFileAttributes = entityDroolsExecutionService.executeRules(kieWrapperEntityRules.container(),
document,
sectionsToReAnalyse,
dictionary,
analyzeRequest.getFileAttributes(),
analyzeRequest.getManualRedactions(),
nerEntities);
document,
sectionsToReAnalyse,
dictionary,
analyzeRequest.getFileAttributes(),
analyzeRequest.getManualRedactions(),
nerEntities);
log.info("Finished entity rule execution for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
RedactionLog redactionLog = updatePreviousRedactionLog(analyzeRequest, document, notFoundManualRedactionEntries, previousRedactionLog, sectionsToReanalyseIds);
EntityLogChanges entityLogChanges = entityLogCreatorService.updatePreviousEntityLog(analyzeRequest,
document,
notFoundManualRedactionEntries,
previousEntityLog,
sectionsToReanalyseIds,
dictionary.getVersion());
document,
notFoundManualOrImportedEntries,
previousEntityLog,
sectionsToReanalyseIds,
dictionary.getVersion());
notFoundImportedEntitiesService.processEntityLog(entityLogChanges.getEntityLog(), analyzeRequest, notFoundImportedEntries);
return finalizeAnalysis(analyzeRequest,
startTime,
kieContainerCreationService.getLatestKieContainer(analyzeRequest.getDossierTemplateId(), RuleFileType.COMPONENT),
entityLogChanges,
document,
redactionLog,
document.getNumberOfPages(),
dictionaryIncrement.getDictionaryVersion(),
true,
new HashSet<>(allFileAttributes));
startTime,
kieContainerCreationService.getLatestKieContainer(analyzeRequest.getDossierTemplateId(), RuleFileType.COMPONENT),
entityLogChanges,
document,
document.getNumberOfPages(),
dictionaryIncrement.getDictionaryVersion(),
true,
new HashSet<>(allFileAttributes));
}
@@ -187,6 +194,9 @@ public class AnalyzeService {
Document document = DocumentGraphMapper.toDocumentGraph(observedStorageService.getDocumentData(analyzeRequest.getDossierId(), analyzeRequest.getFileId()));
log.info("Loaded Document Graph for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
ImportedRedactions importedRedactions = redactionStorageService.getImportedRedactions(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
log.info("Loaded Imported Redactions for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
NerEntities nerEntities = getEntityRecognitionEntities(analyzeRequest, document);
log.info("Loaded Ner Entities for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
@@ -194,64 +204,43 @@ public class AnalyzeService {
Dictionary dictionary = dictionaryService.getDeepCopyDictionary(analyzeRequest.getDossierTemplateId(), analyzeRequest.getDossierId());
log.info("Updated Dictionaries for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
List<ManualEntity> notFoundManualRedactionEntries = manualRedactionEntryService.addManualRedactionEntriesAndReturnNotFoundEntries(analyzeRequest,
document,
analyzeRequest.getDossierTemplateId());
var notFoundManualRedactionEntries = manualRedactionEntryService.addManualRedactionEntriesAndReturnNotFoundEntries(analyzeRequest,
document,
analyzeRequest.getDossierTemplateId());
var notFoundImportedEntries = importedRedactionEntryService.addImportedEntriesAndReturnNotFoundEntries(analyzeRequest, importedRedactions, document);
var notFoundManualOrImportedEntries = Stream.of(notFoundManualRedactionEntries, notFoundImportedEntries)
.flatMap(Collection::stream)
.collect(Collectors.toList());
dictionarySearchService.addDictionaryEntities(dictionary, document);
log.info("Finished Dictionary Search for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
// we could add the imported redactions similar to the manual redactions here as well for additional processing
List<FileAttribute> allFileAttributes = entityDroolsExecutionService.executeRules(kieWrapperEntityRules.container(),
document,
dictionary,
analyzeRequest.getFileAttributes(),
analyzeRequest.getManualRedactions(),
nerEntities);
document,
dictionary,
analyzeRequest.getFileAttributes(),
analyzeRequest.getManualRedactions(),
nerEntities);
log.info("Finished entity rule execution for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
RedactionLog redactionLog = createRedactionLog(analyzeRequest, document, notFoundManualRedactionEntries, dictionary, kieWrapperEntityRules);
EntityLog entityLog = entityLogCreatorService.createInitialEntityLog(analyzeRequest,
document,
notFoundManualRedactionEntries,
dictionary.getVersion(),
kieWrapperEntityRules.rulesVersion());
document,
notFoundManualOrImportedEntries,
dictionary.getVersion(),
kieWrapperEntityRules.rulesVersion());
notFoundImportedEntitiesService.processEntityLog(entityLog, analyzeRequest, notFoundImportedEntries);
return finalizeAnalysis(analyzeRequest,
startTime,
kieWrapperComponentRules,
new EntityLogChanges(entityLog, false),
document,
redactionLog,
document.getNumberOfPages(),
dictionary.getVersion(),
false,
new HashSet<>(allFileAttributes));
}
@Deprecated(forRemoval = true)
private RedactionLog updatePreviousRedactionLog(AnalyzeRequest analyzeRequest,
Document document,
List<ManualEntity> notFoundManualRedactionEntries,
RedactionLog previousRedactionLog,
Set<Integer> sectionsToReanalyseIds) {
List<RedactionLogEntry> newRedactionLogEntries = redactionLogCreatorService.createRedactionLog(document,
analyzeRequest.getDossierTemplateId(),
notFoundManualRedactionEntries);
var importedRedactionFilteredEntries = importedRedactionService.processImportedRedactions(analyzeRequest.getDossierTemplateId(),
analyzeRequest.getDossierId(),
analyzeRequest.getFileId(),
newRedactionLogEntries,
false);
previousRedactionLog.getRedactionLogEntry()
.removeIf(entry -> sectionsToReanalyseIds.contains(entry.getSectionNumber()) && !entry.getType().equals(ImportedRedactionService.IMPORTED_REDACTION_TYPE));
previousRedactionLog.getRedactionLogEntry().addAll(importedRedactionFilteredEntries);
return previousRedactionLog;
startTime,
kieWrapperComponentRules,
new EntityLogChanges(entityLog, false),
document,
document.getNumberOfPages(),
dictionary.getVersion(),
false,
new HashSet<>(allFileAttributes));
}
@@ -260,14 +249,11 @@ public class AnalyzeService {
KieWrapper kieWrapperComponentRules,
EntityLogChanges entityLogChanges,
Document document,
RedactionLog redactionLog,
int numberOfPages,
DictionaryVersion dictionaryVersion,
boolean isReanalysis,
Set<FileAttribute> addedFileAttributes) {
finalizeRedactionLog(analyzeRequest, redactionLog, dictionaryVersion);
EntityLog entityLog = entityLogChanges.getEntityLog();
redactionStorageService.storeObject(analyzeRequest.getDossierId(), analyzeRequest.getFileId(), FileType.ENTITY_LOG, entityLogChanges.getEntityLog());
@@ -314,9 +300,10 @@ public class AnalyzeService {
}
List<Component> components = componentDroolsExecutionService.executeRules(kieWrapperComponentRules.container(),
entityLogChanges.getEntityLog(),
document,
addedFileAttributes.stream().toList());
entityLogChanges.getEntityLog(),
document,
addedFileAttributes.stream()
.toList());
log.info("Finished component rule execution for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
ComponentLog componentLog = componentLogCreatorService.buildComponentLog(analyzeRequest.getAnalysisNumber(), components, kieWrapperComponentRules.rulesVersion());
@@ -326,33 +313,22 @@ public class AnalyzeService {
}
private RedactionLogChanges finalizeRedactionLog(AnalyzeRequest analyzeRequest, RedactionLog redactionLog, DictionaryVersion dictionaryVersion) {
// TODO: remove redactionLog related stuff
RedactionLog previousRedactionLog = redactionStorageService.getRedactionLog(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
redactionLog.setDictionaryVersion(dictionaryVersion.getDossierTemplateVersion());
redactionLog.setDossierDictionaryVersion(dictionaryVersion.getDossierVersion());
RedactionLogChanges redactionLogChange = redactionChangeLogService.computeChanges(previousRedactionLog, redactionLog, analyzeRequest.getAnalysisNumber());
redactionStorageService.storeObject(analyzeRequest.getDossierId(), analyzeRequest.getFileId(), FileType.REDACTION_LOG, redactionLogChange.getRedactionLog());
return redactionLogChange;
}
private static List<SemanticNode> getSectionsToReAnalyse(Document document, Set<Integer> sectionsToReanalyseIds) {
return document.streamChildren().filter(section -> sectionsToReanalyseIds.contains(section.getTreeId().get(0))).collect(Collectors.toList());
return document.streamChildren()
.filter(section -> sectionsToReanalyseIds.contains(section.getTreeId()
.get(0)))
.collect(Collectors.toList());
}
private Set<Integer> getSectionsToReanalyseIds(AnalyzeRequest analyzeRequest, EntityLog entityLog, Document document, DictionaryIncrement dictionaryIncrement) {
private Set<Integer> getSectionsToReanalyseIds(AnalyzeRequest analyzeRequest,
EntityLog entityLog,
Document document,
DictionaryIncrement dictionaryIncrement,
ImportedRedactions importedRedactions) {
return analyzeRequest.getSectionsToReanalyse().isEmpty() //
? sectionFinderService.findSectionsToReanalyse(dictionaryIncrement, entityLog, document, analyzeRequest) //
: analyzeRequest.getSectionsToReanalyse();
return sectionFinderService.findSectionsToReanalyse(dictionaryIncrement, entityLog, document, analyzeRequest, importedRedactions);
}
@@ -372,9 +348,10 @@ public class AnalyzeService {
private static NerEntitiesModel filterNerEntitiesModelBySectionIds(Set<Integer> sectionsToReanalyseIds, NerEntitiesModel nerEntitiesModel) {
return new NerEntitiesModel(nerEntitiesModel.getData().entrySet().stream() //
.filter(entry -> sectionsToReanalyseIds.contains(entry.getKey())) //
.collect(Collectors.toMap(Map.Entry::getKey, Map.Entry::getValue)));
return new NerEntitiesModel(nerEntitiesModel.getData().entrySet()
.stream() //
.filter(entry -> sectionsToReanalyseIds.contains(entry.getKey())) //
.collect(Collectors.toMap(Map.Entry::getKey, Map.Entry::getValue)));
}
@@ -389,41 +366,4 @@ public class AnalyzeService {
return nerEntities;
}
@Deprecated(forRemoval = true)
private RedactionLog createRedactionLog(AnalyzeRequest analyzeRequest,
Document document,
List<ManualEntity> notFoundManualRedactionEntries,
Dictionary dictionary,
KieWrapper wrapper) {
List<RedactionLogEntry> redactionLogEntries = redactionLogCreatorService.createRedactionLog(document,
analyzeRequest.getDossierTemplateId(),
notFoundManualRedactionEntries);
List<LegalBasis> legalBasis = legalBasisClient.getLegalBasisMapping(analyzeRequest.getDossierTemplateId());
RedactionLog redactionLog = new RedactionLog(redactionServiceSettings.getAnalysisVersion(),
analyzeRequest.getAnalysisNumber(),
redactionLogEntries,
toRedactionLogLegalBasis(legalBasis),
dictionary.getVersion().getDossierTemplateVersion(),
dictionary.getVersion().getDossierVersion(),
wrapper.rulesVersion(),
legalBasisClient.getVersion(analyzeRequest.getDossierTemplateId()));
List<RedactionLogEntry> importedRedactionFilteredEntries = importedRedactionService.processImportedRedactions(analyzeRequest.getDossierTemplateId(),
analyzeRequest.getDossierId(),
analyzeRequest.getFileId(),
redactionLog.getRedactionLogEntry(),
true);
redactionLog.setRedactionLogEntry(importedRedactionFilteredEntries);
return redactionLog;
}
public List<RedactionLogLegalBasis> toRedactionLogLegalBasis(List<LegalBasis> legalBasis) {
return legalBasis.stream().map(l -> new RedactionLogLegalBasis(l.getName(), l.getDescription(), l.getReason())).collect(Collectors.toList());
}
}
@@ -1,6 +1,7 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.util.List;
import java.util.Set;
import org.springframework.stereotype.Service;
@@ -28,7 +29,8 @@ public class DictionarySearchService {
@Observed(name = "DictionarySearchService", contextualName = "add-dictionary-entries")
public void addDictionaryEntities(Dictionary dictionary, List<SemanticNode> semanticNodes){
public void addDictionaryEntities(Dictionary dictionary, List<SemanticNode> semanticNodes) {
semanticNodes.forEach(node -> addDictionaryEntities(dictionary, node));
}
@@ -52,11 +54,12 @@ public class DictionarySearchService {
EntityCreationService entityCreationService = new EntityCreationService(entityEnrichmentService);
searchImplementation.getBoundaries(node.getTextBlock(), node.getTextRange())
.stream().filter(boundary -> entityCreationService.isValidEntityTextRange(node.getTextBlock(), boundary))
.map(bounds -> entityCreationService.forceByTextRange(bounds, type, entityType, node))
.peek(entity -> entity.setDictionaryEntry(true))
.peek(entity -> entity.setDossierDictionaryEntry(isDossierDictionaryEntry))
.forEach(entity -> entity.addEngine(Engine.DICTIONARY));
.stream()
.filter(boundary -> entityCreationService.isValidEntityTextRange(node.getTextBlock(), boundary))
.forEach(bounds -> entityCreationService.byTextRangeWithEngine(bounds, type, entityType, node, Set.of(Engine.DICTIONARY)).ifPresent(entity -> {
entity.setDictionaryEntry(true);
entity.setDossierDictionaryEntry(isDossierDictionaryEntry);
}));
}
}
@@ -160,13 +160,19 @@ public class DictionaryService {
List<DictionaryModel> dictionary = typeResponse.stream().map(t -> {
Optional<DictionaryModel> oldModel;
Optional<DictionaryModel> optionalOldModel;
if (dossierId == null) {
var representation = getDossierTemplateDictionary(dossierTemplateId);
oldModel = representation != null ? representation.getDictionary().stream().filter(f -> f.getType().equals(t.getType())).findAny() : Optional.empty();
optionalOldModel = representation != null ? representation.getDictionary()
.stream()
.filter(f -> f.getType().equals(t.getType()))
.findAny() : Optional.empty();
} else {
var representation = getDossierDictionary(dossierId);
oldModel = representation != null ? representation.getDictionary().stream().filter(f -> f.getType().equals(t.getType())).findAny() : Optional.empty();
optionalOldModel = representation != null ? representation.getDictionary()
.stream()
.filter(f -> f.getType().equals(t.getType()))
.findAny() : Optional.empty();
}
Set<DictionaryEntryModel> entries = new HashSet<>();
@@ -179,19 +185,38 @@ public class DictionaryService {
var newFalsePositivesValues = newEntries.getFalsePositives().stream().map(DictionaryEntry::getValue).collect(Collectors.toSet());
var newFalseRecommendationsValues = newEntries.getFalseRecommendations().stream().map(DictionaryEntry::getValue).collect(Collectors.toSet());
oldModel.ifPresent(oldDictionaryModel -> {
optionalOldModel.ifPresent(oldDictionaryModel -> {
});
// add old entries from existing DictionaryModel
oldModel.ifPresent(dictionaryModel -> entries.addAll(dictionaryModel.getEntries().stream().filter(f -> !newValues.contains(f.getValue())).toList()));
oldModel.ifPresent(dictionaryModel -> falsePositives.addAll(dictionaryModel.getFalsePositives()
.stream()
.filter(f -> !newFalsePositivesValues.contains(f.getValue()))
.toList()));
oldModel.ifPresent(dictionaryModel -> falseRecommendations.addAll(dictionaryModel.getFalseRecommendations()
.stream()
.filter(f -> !newFalseRecommendationsValues.contains(f.getValue()))
.toList()));
if (optionalOldModel.isPresent()) {
var oldModel = optionalOldModel.get();
if (oldModel.isCaseInsensitive() && !t.isCaseInsensitive()) {
// add old entries from existing DictionaryModel but exclude lower case representation
entries.addAll(oldModel.getEntries().stream().filter(f -> !newValues.stream().map(s -> s.toLowerCase(Locale.ROOT)).toList().contains(f.getValue())).toList());
falsePositives.addAll(oldModel.getFalsePositives()
.stream()
.filter(f -> !newFalsePositivesValues.stream().map(s -> s.toLowerCase(Locale.ROOT)).toList().contains(f.getValue()))
.toList());
falseRecommendations.addAll(oldModel.getFalseRecommendations()
.stream()
.filter(f -> !newFalseRecommendationsValues.stream().map(s -> s.toLowerCase(Locale.ROOT)).toList().contains(f.getValue()))
.toList());
} else if (!oldModel.isCaseInsensitive() && t.isCaseInsensitive()) {
// add old entries from existing DictionaryModel but exclude upper case representation
entries.addAll(oldModel.getEntries().stream().filter(f -> !newValues.contains(f.getValue().toLowerCase(Locale.ROOT))).toList());
falsePositives.addAll(oldModel.getFalsePositives().stream().filter(f -> !newFalsePositivesValues.contains(f.getValue().toLowerCase(Locale.ROOT))).toList());
falseRecommendations.addAll(oldModel.getFalseRecommendations()
.stream()
.filter(f -> !newFalseRecommendationsValues.contains(f.getValue().toLowerCase(Locale.ROOT)))
.toList());
} else {
// add old entries from existing DictionaryModel
entries.addAll(oldModel.getEntries().stream().filter(f -> !newValues.contains(f.getValue())).toList());
falsePositives.addAll(oldModel.getFalsePositives().stream().filter(f -> !newFalsePositivesValues.contains(f.getValue())).toList());
falseRecommendations.addAll(oldModel.getFalseRecommendations().stream().filter(f -> !newFalseRecommendationsValues.contains(f.getValue())).toList());
}
}
// Add Increments
entries.addAll(newEntries.getEntries());
@@ -1,6 +1,7 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.time.OffsetDateTime;
import java.util.Comparator;
import java.util.List;
import java.util.Optional;
import java.util.Set;
@@ -12,19 +13,24 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryState;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
import io.micrometer.core.annotation.Timed;
import lombok.AccessLevel;
import lombok.RequiredArgsConstructor;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@RequiredArgsConstructor
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
public class EntityChangeLogService {
@Timed("redactmanager_computeChanges")
public boolean computeChanges(List<EntityLogEntry> previousEntityLogEntries, List<EntityLogEntry> newEntityLogEntries, int analysisNumber) {
public boolean computeChanges(List<EntityLogEntry> previousEntityLogEntries, List<EntityLogEntry> newEntityLogEntries, ManualRedactions manualRedactions, int analysisNumber) {
var now = OffsetDateTime.now();
if (previousEntityLogEntries.isEmpty()) {
@@ -35,13 +41,16 @@ public class EntityChangeLogService {
boolean hasChanges = false;
for (EntityLogEntry entityLogEntry : newEntityLogEntries) {
Optional<EntityLogEntry> optionalPreviousEntity = previousEntityLogEntries.stream().filter(entry -> entry.getId().equals(entityLogEntry.getId())).findAny();
Optional<EntityLogEntry> optionalPreviousEntity = previousEntityLogEntries.stream()
.filter(entry -> entry.getId().equals(entityLogEntry.getId()))
.findAny();
if (optionalPreviousEntity.isEmpty()) {
hasChanges = true;
entityLogEntry.getChanges().add(new Change(analysisNumber, ChangeType.ADDED, now));
continue;
}
var previousEntity = optionalPreviousEntity.get();
EntityLogEntry previousEntity = optionalPreviousEntity.get();
entityLogEntry.getChanges().addAll(previousEntity.getChanges());
if (!previousEntity.getState().equals(entityLogEntry.getState())) {
hasChanges = true;
@@ -49,27 +58,50 @@ public class EntityChangeLogService {
entityLogEntry.getChanges().add(new Change(analysisNumber, changeType, now));
}
}
addRemovedEntriesAsRemoved(previousEntityLogEntries, newEntityLogEntries, analysisNumber, now);
addRemovedEntriesAsRemoved(previousEntityLogEntries, newEntityLogEntries, manualRedactions, analysisNumber, now);
return hasChanges;
}
private static void addRemovedEntriesAsRemoved(List<EntityLogEntry> previousEntityLogEntries,
List<EntityLogEntry> newEntityLogEntries,
int analysisNumber,
OffsetDateTime now) {
private void addRemovedEntriesAsRemoved(List<EntityLogEntry> previousEntityLogEntries,
List<EntityLogEntry> newEntityLogEntries,
ManualRedactions manualRedactions,
int analysisNumber,
OffsetDateTime now) {
Set<String> existingIds = newEntityLogEntries.stream().map(EntityLogEntry::getId).collect(Collectors.toSet());
// no need to check imported redactions because they will be added with the merged changes after this step
Set<String> existingIds = newEntityLogEntries.stream()
.map(EntityLogEntry::getId)
.collect(Collectors.toSet());
List<EntityLogEntry> removedEntries = previousEntityLogEntries.stream()
.filter(entry -> !entry.getType().equals(ImportedRedactionService.IMPORTED_REDACTION_TYPE) && !existingIds.contains(entry.getId()))
.filter(entry -> !existingIds.contains(entry.getId()))
.collect(Collectors.toList());
List<EntityLogEntry> removedDossierRedaction = removedEntries.stream()
.filter(e -> e.getState() == EntryState.REMOVED && e.getType().equals("dossier_redaction"))
.toList();
previousEntityLogEntries.removeAll(removedDossierRedaction);
removedEntries.removeAll(removedDossierRedaction);
removedEntries.forEach(entry -> entry.getChanges().add(new Change(analysisNumber, ChangeType.REMOVED, now)));
removedEntries.forEach(entry -> entry.setState(EntryState.REMOVED));
removedEntries.forEach(entry -> addManualChangeForDictionaryRemovals(entry, manualRedactions));
newEntityLogEntries.addAll(removedEntries);
}
private void addManualChangeForDictionaryRemovals(EntityLogEntry entry, ManualRedactions manualRedactions) {
if (manualRedactions == null || manualRedactions.getIdsToRemove().isEmpty()) {
return;
}
manualRedactions.getIdsToRemove()
.stream()
.filter(IdRemoval::isRemoveFromDictionary)//
.filter(removed -> removed.getAnnotationId().equals(entry.getId()))//
.findFirst()//
.ifPresent(idRemove -> entry.getManualChanges().add(ManualChangeFactory.toManualChange(idRemove, false)));
}
private ChangeType calculateChangeType(EntryState state, EntryState previousState) {
if (state.equals(previousState)) {
@@ -11,6 +11,7 @@ import java.util.stream.Collectors;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogChanges;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
@@ -21,10 +22,11 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.legalbasis.LegalBasis;
import com.iqser.red.service.redaction.v1.server.RedactionServiceSettings;
import com.iqser.red.service.redaction.v1.server.client.LegalBasisClient;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryVersion;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.IEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.ManualChangeOverwrite;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
@@ -44,8 +46,6 @@ import lombok.extern.slf4j.Slf4j;
public class EntityLogCreatorService {
DictionaryService dictionaryService;
ManualChangeFactory manualChangeFactory;
ImportedRedactionService importedRedactionService;
RedactionServiceSettings redactionServiceSettings;
LegalBasisClient legalBasisClient;
EntityChangeLogService entityChangeLogService;
@@ -60,31 +60,26 @@ public class EntityLogCreatorService {
public EntityLog createInitialEntityLog(AnalyzeRequest analyzeRequest,
Document document,
List<ManualEntity> notFoundManualEntities,
List<PrecursorEntity> notFoundEntities,
DictionaryVersion dictionaryVersion,
long rulesVersion) {
List<EntityLogEntry> entityLogEntries = createEntityLogEntries(document, analyzeRequest.getDossierTemplateId(), notFoundManualEntities);
List<EntityLogEntry> entityLogEntries = createEntityLogEntries(document, analyzeRequest, notFoundEntities);
List<LegalBasis> legalBasis = legalBasisClient.getLegalBasisMapping(analyzeRequest.getDossierTemplateId());
EntityLog entityLog = new EntityLog(redactionServiceSettings.getAnalysisVersion(),
analyzeRequest.getAnalysisNumber(),
entityLogEntries,
toEntityLogLegalBasis(legalBasis),
dictionaryVersion.getDossierTemplateVersion(),
dictionaryVersion.getDossierVersion(),
rulesVersion,
legalBasisClient.getVersion(analyzeRequest.getDossierTemplateId()));
List<EntityLogEntry> previousExistingEntityLogEntries = getPreviousEntityLogEntries(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
// compute changes will be done for the new entries without the imported redactions, since previous imported redactions are present in
// previousExistingEntityLogEntries and have to be ignored in this calculation because the changes will be merged in the next step (processImportedRedactions)
entityChangeLogService.computeChanges(previousExistingEntityLogEntries, entityLogEntries, analyzeRequest.getAnalysisNumber());
// check to see if there are imported redactions and only then recreate them
importedRedactionService.processImportedRedactions(entityLog, analyzeRequest);
entityChangeLogService.computeChanges(previousExistingEntityLogEntries, entityLogEntries, analyzeRequest.getManualRedactions(), analyzeRequest.getAnalysisNumber());
return entityLog;
return new EntityLog(redactionServiceSettings.getAnalysisVersion(),
analyzeRequest.getAnalysisNumber(),
entityLogEntries,
toEntityLogLegalBasis(legalBasis),
dictionaryVersion.getDossierTemplateVersion(),
dictionaryVersion.getDossierVersion(),
rulesVersion,
legalBasisClient.getVersion(analyzeRequest.getDossierTemplateId()));
}
@@ -113,43 +108,54 @@ public class EntityLogCreatorService {
public EntityLogChanges updatePreviousEntityLog(AnalyzeRequest analyzeRequest,
Document document,
List<ManualEntity> notFoundManualRedactionEntries,
List<PrecursorEntity> notFoundEntries,
EntityLog previousEntityLog,
Set<Integer> sectionsToReanalyseIds,
DictionaryVersion dictionaryVersion) {
List<EntityLogEntry> newEntityLogEntries = createEntityLogEntries(document, analyzeRequest.getDossierTemplateId(), notFoundManualRedactionEntries).stream()
.filter(entry -> entry.getContainingNodeId().isEmpty() || sectionsToReanalyseIds.contains(entry.getContainingNodeId().get(0)))
List<EntityLogEntry> newEntityLogEntries = createEntityLogEntries(document, analyzeRequest, notFoundEntries).stream()
.filter(entry -> entry.getContainingNodeId().isEmpty() || sectionsToReanalyseIds.contains(entry.getContainingNodeId()
.get(0)))
.collect(Collectors.toList());
Set<String> newEntityIds = newEntityLogEntries.stream().map(EntityLogEntry::getId).collect(Collectors.toSet());
Set<String> newEntityIds = newEntityLogEntries.stream()
.map(EntityLogEntry::getId)
.collect(Collectors.toSet());
List<EntityLogEntry> previousEntriesFromReAnalyzedSections = previousEntityLog.getEntityLogEntry()
.stream()
.filter(entry -> !entry.getType().equals(ImportedRedactionService.IMPORTED_REDACTION_TYPE) && (newEntityIds.contains(entry.getId()) || entry.getContainingNodeId()
.isEmpty() || sectionsToReanalyseIds.contains(entry.getContainingNodeId().get(0))))
.toList();
.filter(entry -> (newEntityIds.contains(entry.getId()) || entry.getContainingNodeId().isEmpty() || sectionsToReanalyseIds.contains(entry.getContainingNodeId()
.get(0))))
.collect(Collectors.toList());
previousEntityLog.getEntityLogEntry().removeAll(previousEntriesFromReAnalyzedSections);
boolean hasChanges = entityChangeLogService.computeChanges(previousEntriesFromReAnalyzedSections, newEntityLogEntries, analyzeRequest.getAnalysisNumber());
boolean hasChanges = entityChangeLogService.computeChanges(previousEntriesFromReAnalyzedSections,
newEntityLogEntries,
analyzeRequest.getManualRedactions(),
analyzeRequest.getAnalysisNumber());
previousEntityLog.getEntityLogEntry().addAll(newEntityLogEntries);
importedRedactionService.processImportedRedactions(previousEntityLog, analyzeRequest);
return updateVersionsAndReturnChanges(previousEntityLog, dictionaryVersion, analyzeRequest, hasChanges);
}
private List<EntityLogEntry> createEntityLogEntries(Document document, String dossierTemplateId, List<ManualEntity> notFoundManualRedactionEntries) {
private List<EntityLogEntry> createEntityLogEntries(Document document, AnalyzeRequest analyzeRequest, List<PrecursorEntity> notFoundPrecursorEntries) {
String dossierTemplateId = analyzeRequest.getDossierTemplateId();
List<EntityLogEntry> entries = new ArrayList<>();
document.getEntities()
.stream()
.filter(entity -> !entity.getValue().isEmpty())
.filter(EntityLogCreatorService::notFalsePositiveOrFalseRecommendation)
.filter(entity -> !entity.removed())
.forEach(entityNode -> entries.addAll(toEntityLogEntries(entityNode)));
document.streamAllImages().filter(entity -> !entity.removed()).forEach(imageNode -> entries.add(createEntityLogEntry(imageNode, dossierTemplateId)));
notFoundManualRedactionEntries.stream().filter(entity -> !entity.removed()).forEach(manualEntity -> entries.add(createEntityLogEntry(manualEntity)));
document.streamAllImages()
.filter(entity -> !entity.removed())
.forEach(imageNode -> entries.add(createEntityLogEntry(imageNode, dossierTemplateId)));
notFoundPrecursorEntries.stream()
.filter(entity -> !entity.removed())
.forEach(precursorEntity -> entries.add(createEntityLogEntry(precursorEntity, dossierTemplateId)));
return entries;
}
@@ -180,12 +186,11 @@ public class EntityLogCreatorService {
private EntityLogEntry createEntityLogEntry(Image image, String dossierTemplateId) {
String imageType = image.getImageType().equals(ImageType.OTHER) ? "image" : image.getImageType().toString().toLowerCase(Locale.ENGLISH);
boolean isHint = dictionaryService.isHint(imageType, dossierTemplateId);
boolean isHint = dictionaryService.isHint(image.type(), dossierTemplateId);
return EntityLogEntry.builder()
.id(image.getId())
.value(image.value())
.type(imageType)
.type(image.type())
.reason(image.buildReasonWithManualChangeDescriptions())
.legalBasis(image.legalBasis())
.matchedRule(image.getMatchedRule().getRuleIdentifier().toString())
@@ -193,47 +198,53 @@ public class EntityLogCreatorService {
.positions(List.of(new Position(image.getPosition(), image.getPage().getNumber())))
.containingNodeId(image.getTreeId())
.closestHeadline(image.getHeadline().getTextBlock().getSearchText())
.section(image.getManualOverwrite().getSection().orElse(image.getParent().toString()))
.section(image.getManualOverwrite().getSection()
.orElse(image.getParent().toString()))
.imageHasTransparency(image.isTransparent())
.manualChanges(manualChangeFactory.toManualChangeList(image.getManualOverwrite().getManualChangeLog(), isHint))
.manualChanges(ManualChangeFactory.toManualChangeList(image.getManualOverwrite().getManualChangeLog(), isHint))
.state(buildEntryState(image))
.entryType(isHint ? EntryType.IMAGE_HINT : EntryType.IMAGE)
.engines(getEngines(null, image.getManualOverwrite()))
.build();
}
private EntityLogEntry createEntityLogEntry(ManualEntity manualEntity) {
private EntityLogEntry createEntityLogEntry(PrecursorEntity precursorEntity, String dossierTemplateId) {
String type = manualEntity.getManualOverwrite().getType().orElse(manualEntity.getType());
boolean isHint = isHint(manualEntity.getEntityType());
String type = precursorEntity.getManualOverwrite().getType()
.orElse(precursorEntity.getType());
boolean isHint = isHint(precursorEntity.getEntityType());
return EntityLogEntry.builder()
.id(manualEntity.getId())
.reason(manualEntity.buildReasonWithManualChangeDescriptions())
.legalBasis(manualEntity.legalBasis())
.value(manualEntity.value())
.id(precursorEntity.getId())
.reason(precursorEntity.buildReasonWithManualChangeDescriptions())
.legalBasis(precursorEntity.legalBasis())
.value(precursorEntity.value())
.type(type)
.state(buildEntryState(manualEntity))
.entryType(buildEntryType(manualEntity))
.section(manualEntity.getManualOverwrite().getSection().orElse(manualEntity.getSection()))
.state(buildEntryState(precursorEntity))
.entryType(buildEntryType(precursorEntity))
.section(precursorEntity.getManualOverwrite().getSection()
.orElse(precursorEntity.getSection()))
.containingNodeId(Collections.emptyList())
.closestHeadline("")
.matchedRule(manualEntity.getMatchedRule().getRuleIdentifier().toString())
.dictionaryEntry(manualEntity.isDictionaryEntry())
.dossierDictionaryEntry(manualEntity.isDossierDictionaryEntry())
.matchedRule(precursorEntity.getMatchedRule().getRuleIdentifier().toString())
.dictionaryEntry(precursorEntity.isDictionaryEntry())
.dossierDictionaryEntry(precursorEntity.isDossierDictionaryEntry())
.textAfter("")
.textBefore("")
.startOffset(-1)
.endOffset(-1)
.positions(manualEntity.getManualOverwrite()
.getPositions()
.orElse(manualEntity.getEntityPosition())
.stream()
.map(entityPosition -> new Position(entityPosition.rectangle2D(), entityPosition.pageNumber()))
.toList())
.engines(Collections.emptySet())
.positions(precursorEntity.getManualOverwrite().getPositions()
.orElse(precursorEntity.getEntityPosition())
.stream()
.map(entityPosition -> new Position(entityPosition.rectangle2D(), entityPosition.pageNumber()))
.toList())
.engines(getEngines(precursorEntity.getEngines(), precursorEntity.getManualOverwrite()))
//imported is no longer used, frontend should check engines
//(was .imported(precursorEntity.getEngines() != null && precursorEntity.getEngines().contains(Engine.IMPORTED)))
.imported(false)
.reference(Collections.emptySet())
.manualChanges(manualChangeFactory.toManualChangeList(manualEntity.getManualOverwrite().getManualChangeLog(), isHint))
.manualChanges(ManualChangeFactory.toManualChangeList(precursorEntity.getManualOverwrite().getManualChangeLog(), isHint))
.build();
}
@@ -241,14 +252,20 @@ public class EntityLogCreatorService {
private EntityLogEntry createEntityLogEntry(TextEntity entity) {
Set<String> referenceIds = new HashSet<>();
entity.references().stream().filter(TextEntity::active).forEach(ref -> ref.getPositionsOnPagePerPage().forEach(pos -> referenceIds.add(pos.getId())));
entity.references()
.stream()
.filter(TextEntity::active)
.forEach(ref -> ref.getPositionsOnPagePerPage()
.forEach(pos -> referenceIds.add(pos.getId())));
boolean isHint = isHint(entity.getEntityType());
return EntityLogEntry.builder()
.reason(entity.buildReasonWithManualChangeDescriptions())
.legalBasis(entity.legalBasis())
.value(entity.getManualOverwrite().getValue().orElse(entity.getMatchedRule().isWriteValueWithLineBreaks() ? entity.getValueWithLineBreaks() : entity.getValue()))
.value(entity.getManualOverwrite().getValue()
.orElse(entity.getMatchedRule().isWriteValueWithLineBreaks() ? entity.getValueWithLineBreaks() : entity.getValue()))
.type(entity.type())
.section(entity.getManualOverwrite().getSection().orElse(entity.getDeepestFullyContainingNode().toString()))
.section(entity.getManualOverwrite().getSection()
.orElse(entity.getDeepestFullyContainingNode().toString()))
.containingNodeId(entity.getDeepestFullyContainingNode().getTreeId())
.closestHeadline(entity.getDeepestFullyContainingNode().getHeadline().getTextBlock().getSearchText())
.matchedRule(entity.getMatchedRule().getRuleIdentifier().toString())
@@ -258,22 +275,36 @@ public class EntityLogCreatorService {
.startOffset(entity.getTextRange().start())
.endOffset(entity.getTextRange().end())
.dossierDictionaryEntry(entity.isDossierDictionaryEntry())
.engines(entity.getEngines() != null ? entity.getEngines() : Collections.emptySet())
.engines(getEngines(entity.getEngines(), entity.getManualOverwrite()))
//imported is no longer used, frontend should check engines
//(was .imported(entity.getEngines() != null && entity.getEngines().contains(Engine.IMPORTED)))
.imported(false)
.reference(referenceIds)
.manualChanges(manualChangeFactory.toManualChangeList(entity.getManualOverwrite().getManualChangeLog(), isHint))
.manualChanges(ManualChangeFactory.toManualChangeList(entity.getManualOverwrite().getManualChangeLog(), isHint))
.state(buildEntryState(entity))
.entryType(buildEntryType(entity))
.build();
}
private Set<Engine> getEngines(Set<Engine> currentEngines, ManualChangeOverwrite manualChangeOverwrite) {
Set<Engine> engines = currentEngines != null ? new HashSet<>(currentEngines) : new HashSet<>();
if (manualChangeOverwrite != null && !manualChangeOverwrite.getManualChangeLog().isEmpty()) {
engines.add(Engine.MANUAL);
}
return engines;
}
private boolean isHint(EntityType entityType) {
return entityType.equals(EntityType.HINT);
}
private EntryState buildEntryState(IEntity entity) {
public static EntryState buildEntryState(IEntity entity) {
if (entity.applied() && entity.active()) {
return EntryState.APPLIED;
@@ -287,15 +318,17 @@ public class EntityLogCreatorService {
}
private EntryType buildEntryType(IEntity entity) {
public static EntryType buildEntryType(IEntity entity) {
if (entity instanceof TextEntity textEntity) {
return getEntryType(textEntity.getEntityType());
} else if (entity instanceof ManualEntity manualEntity) {
if (manualEntity.isRectangle()) {
} else if (entity instanceof PrecursorEntity precursorEntity) {
if (precursorEntity.isRectangle()) {
return EntryType.AREA;
}
return getEntryType(manualEntity.getEntityType());
return getEntryType(precursorEntity.getEntityType());
} else if (entity instanceof Image) {
return EntryType.IMAGE;
}
throw new UnsupportedOperationException(String.format("Entity subclass %s is not implemented!", entity.getClass()));
}
@@ -315,7 +348,9 @@ public class EntityLogCreatorService {
private List<EntityLogLegalBasis> toEntityLogLegalBasis(List<LegalBasis> legalBasis) {
return legalBasis.stream().map(l -> new EntityLogLegalBasis(l.getName(), l.getDescription(), l.getReason())).collect(Collectors.toList());
return legalBasis.stream()
.map(l -> new EntityLogLegalBasis(l.getName(), l.getDescription(), l.getReason()))
.collect(Collectors.toList());
}
}
@@ -1,195 +0,0 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.time.OffsetDateTime;
import java.util.Collection;
import java.util.Collections;
import java.util.Comparator;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import java.util.stream.Stream;
import org.springframework.stereotype.Service;
import com.google.common.base.Strings;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryState;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualForceRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
// This is retrieved from persistence service and updated to the needs for imported redactions
@Service
@Slf4j
@RequiredArgsConstructor
public class ImportedRedactionEntriesMergeService {
public List<EntityLogEntry> mergeManualChangesForImportedRedactions(List<EntityLogEntry> importedRedactionsEntityLogEntries, AnalyzeRequest analyzeRequest) {
log.debug("Merging manual changes for imported redactions with analyze number: {}", analyzeRequest.getAnalysisNumber());
Set<String> importedRedactionsIds = importedRedactionsEntityLogEntries.stream().map(e -> e.getId()).collect(Collectors.toSet());
List<BaseAnnotation> allManualChangesForImportedRedactions = allManualChangesForImportedRedactions(analyzeRequest.getManualRedactions(), importedRedactionsIds);
if (allManualChangesForImportedRedactions.isEmpty()) {
log.debug("no changes for imported redactions");
// no changes for the imported redactions
return importedRedactionsEntityLogEntries;
}
final int analysisNumber = analyzeRequest.getAnalysisNumber();
// Sort manual changes by date, so we process them in order of when they were requested
allManualChangesForImportedRedactions = allManualChangesForImportedRedactions.stream().sorted(Comparator.comparing(BaseAnnotation::getRequestDate)).toList();
allManualChangesForImportedRedactions.forEach(manualChange -> {
// this is ugly and should be replaced with switch pattern matching https://openjdk.org/jeps/406 -> requires Java 17 (preview) or higher
if (manualChange instanceof IdRemoval idRemoval) {
mergeIdsToRemove(idRemoval, importedRedactionsEntityLogEntries, analysisNumber);
} else if (manualChange instanceof ManualResizeRedaction manualResizeRedaction) {
mergeResizeRedactions(manualResizeRedaction, importedRedactionsEntityLogEntries, analysisNumber);
} else if (manualChange instanceof ManualLegalBasisChange manualLegalBasisChange) {
mergeLegalBasisChanges(manualLegalBasisChange, importedRedactionsEntityLogEntries, analysisNumber);
} else if (manualChange instanceof ManualForceRedaction manualForceRedaction) {
mergeForceRedactions(manualForceRedaction, importedRedactionsEntityLogEntries, analysisNumber);
}
});
return importedRedactionsEntityLogEntries;
}
private List<BaseAnnotation> allManualChangesForImportedRedactions(ManualRedactions manualRedactions, Set<String> importedRedactionsIds) {
log.debug("allManualChangesForImportedRedactions {} manualRedactions resize: {} legalChanges {} removals {} force {}", importedRedactionsIds.size(), manualRedactions.getResizeRedactions().size(), manualRedactions.getLegalBasisChanges().size(),
manualRedactions.getIdsToRemove().size(), manualRedactions.getForceRedactions().size());
List<BaseAnnotation> annotations = Stream.of(manualRedactions.getForceRedactions(),
manualRedactions.getResizeRedactions(),
manualRedactions.getIdsToRemove(),
manualRedactions.getLegalBasisChanges()).flatMap(Collection::stream).map(baseAnnotation -> (BaseAnnotation) baseAnnotation)
.filter(baseAnnotation -> importedRedactionsIds.contains(baseAnnotation.getAnnotationId())).toList();
return annotations;
}
public void mergeIdsToRemove(IdRemoval idRemoval, List<EntityLogEntry> entityLogEntries, int analysisNumber) {
var entity = entityLogEntries.stream().filter(entityLogEntry -> entityLogEntry.getId().equals(idRemoval.getAnnotationId())).findAny();
entity.ifPresent(entityLogEntry -> {
entityLogEntry.setState(EntryState.IGNORED);
addChanges(entityLogEntry.getChanges(), ChangeType.REMOVED, analysisNumber, idRemoval.getRequestDate());
entityLogEntry.getManualChanges()
.add(ManualChange.builder()
.manualRedactionType(ManualRedactionType.REMOVE_LOCALLY)
.requestedDate(idRemoval.getRequestDate())
.processedDate(idRemoval.getProcessedDate() == null ? OffsetDateTime.now() : idRemoval.getProcessedDate())
.userId(idRemoval.getUser())
.build());
});
}
public void mergeResizeRedactions(ManualResizeRedaction manualResizeRedaction, List<EntityLogEntry> entityLogEntries, int analysisNumber) {
var entity = entityLogEntries.stream().filter(entityLogEntry -> entityLogEntry.getId().equals(manualResizeRedaction.getAnnotationId())).findAny();
entity.ifPresent(entityLogEntry -> {
entityLogEntry.setTextAfter(manualResizeRedaction.getTextAfter());
entityLogEntry.setTextBefore(manualResizeRedaction.getTextBefore());
entityLogEntry.setPositions(convertPositions(manualResizeRedaction.getPositions()));
addChanges(entityLogEntry.getChanges(), ChangeType.CHANGED, analysisNumber, manualResizeRedaction.getRequestDate());
ManualChange.ManualChangeBuilder manualChange = ManualChange.builder()
.manualRedactionType(ManualRedactionType.RESIZE)
.requestedDate(manualResizeRedaction.getRequestDate())
.processedDate(manualResizeRedaction.getProcessedDate() == null ? OffsetDateTime.now() : manualResizeRedaction.getProcessedDate())
.userId(manualResizeRedaction.getUser());
entityLogEntry.getManualChanges().add(manualChange.build());
});
}
public void mergeLegalBasisChanges(ManualLegalBasisChange manualLegalBasisChange, List<EntityLogEntry> entityLogEntries, int analysisNumber) {
var entity = entityLogEntries.stream().filter(entityLogEntry -> entityLogEntry.getId().equals(manualLegalBasisChange.getAnnotationId())).findAny();
entity.ifPresent(entityLogEntry -> {
entityLogEntry.setLegalBasis(manualLegalBasisChange.getLegalBasis());
entityLogEntry.setSection(manualLegalBasisChange.getSection());
entityLogEntry.setValue(manualLegalBasisChange.getValue());
addChanges(entityLogEntry.getChanges(), ChangeType.CHANGED, analysisNumber, manualLegalBasisChange.getRequestDate());
Map<String, String> propertyChanges = getPropertyChanges(manualLegalBasisChange);
entityLogEntry.getManualChanges().add(ManualChange.builder()
.manualRedactionType(ManualRedactionType.LEGAL_BASIS_CHANGE)
.requestedDate(manualLegalBasisChange.getRequestDate())
.processedDate(manualLegalBasisChange.getProcessedDate() == null ? OffsetDateTime.now() : manualLegalBasisChange.getProcessedDate())
.propertyChanges(propertyChanges)
.userId(manualLegalBasisChange.getUser())
.build());
});
}
private Map<String, String> getPropertyChanges(ManualLegalBasisChange manualLegalBasisChange) {
Map<String, String> propertyChanges = new HashMap<>();
if (!Strings.isNullOrEmpty(manualLegalBasisChange.getLegalBasis())) {
propertyChanges.put("legalBasis", manualLegalBasisChange.getLegalBasis());
}
if (!Strings.isNullOrEmpty(manualLegalBasisChange.getValue())) {
propertyChanges.put("value", manualLegalBasisChange.getValue());
}
if(!Strings.isNullOrEmpty(manualLegalBasisChange.getSection())) {
propertyChanges.put("section", manualLegalBasisChange.getSection());
}
return propertyChanges;
}
public void mergeForceRedactions(ManualForceRedaction forceRedaction, List<EntityLogEntry> entityLogEntries, int analysisNumber) {
var entity = entityLogEntries.stream().filter(entityLogEntry -> entityLogEntry.getId().equals(forceRedaction.getAnnotationId())).findAny();
entity.ifPresent(entityLogEntry -> {
entityLogEntry.setLegalBasis(forceRedaction.getLegalBasis());
entityLogEntry.setState(entityLogEntry.getEntryType().equals(EntryType.HINT) ? EntryState.SKIPPED : EntryState.APPLIED);
addChanges(entityLogEntry.getChanges(), ChangeType.CHANGED, analysisNumber, forceRedaction.getRequestDate());
var forceRedactManualChange = ManualChange.builder()
.manualRedactionType(ManualRedactionType.FORCE_REDACT)
.requestedDate(forceRedaction.getRequestDate())
.processedDate(forceRedaction.getProcessedDate() == null ? OffsetDateTime.now() : forceRedaction.getProcessedDate())
.userId(forceRedaction.getUser());
if (forceRedaction.getLegalBasis() != null && !forceRedaction.getLegalBasis().isEmpty()) {
forceRedactManualChange.propertyChanges(Map.of("legalBasis", forceRedaction.getLegalBasis()));
}
entityLogEntry.getManualChanges().add(forceRedactManualChange.build());
});
}
private void addChanges(List<Change> changes, ChangeType changeType, int analysisNumber, OffsetDateTime offsetDateTime) {
if (!changes.isEmpty()) {
changes.add(Change.builder()
.analysisNumber(analysisNumber)
.dateTime(offsetDateTime)
.type(changeType)
.build());
} else {
changes.add(Change.builder().analysisNumber(analysisNumber).dateTime(OffsetDateTime.now()).type(changeType).build());
}
}
private List<Position> convertPositions(List<Rectangle> rectangles) {
return rectangles.stream().map(rectangle -> new Position(rectangle.getTopLeftX(), rectangle.getTopLeftY(), rectangle.getWidth(), rectangle.getHeight(), rectangle.getPage())).collect(Collectors.toList());
}
}
@@ -1,339 +0,0 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.time.OffsetDateTime;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Collections;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Optional;
import java.util.Set;
import java.util.stream.Collectors;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Point;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryState;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import io.micrometer.core.annotation.Timed;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Service
@Slf4j
@RequiredArgsConstructor
public class ImportedRedactionService {
public static final String IMPORTED_REDACTION_TYPE = "imported_redaction";
private final DictionaryService dictionaryService;
private final RedactionStorageService redactionStorageService;
private final ImportedRedactionEntriesMergeService importedRedactionEntriesMergeService;
@Deprecated(forRemoval = true)
@Timed("redactmanager_processImportedRedactions")
public List<RedactionLogEntry> processImportedRedactions(String dossierTemplateId,
String dossierId,
String fileId,
List<RedactionLogEntry> redactionLogEntries,
boolean addImportedRedactions) {
var importedRedactions = redactionStorageService.getImportedRedactions(dossierId, fileId);
if (importedRedactions == null) {
return redactionLogEntries;
}
redactionLogEntries.forEach(redactionLogEntry -> addIntersections(redactionLogEntry, importedRedactions));
if (addImportedRedactions) {
return addImportedRedactionsRedactionLogEntries(dossierTemplateId, redactionLogEntries, importedRedactions);
}
return redactionLogEntries;
}
// Always recreate the imported redactions
@Timed("redactmanager_processImportedRedactions")
public void processImportedRedactions(EntityLog entityLog, AnalyzeRequest analyzeRequest) {
// recreate imported redactions with manual changes
ImportedRedactions importedRedactions = redactionStorageService.getImportedRedactions(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
if (importedRedactions == null || importedRedactions.getImportedRedactions() == null || importedRedactions.getImportedRedactions().isEmpty()) {
log.debug("checkForImportedRedactions - no imported redactions");
return;
}
List<EntityLogEntry> initialImportedRedactionsEntityLogEntries = addImportedRedactionsEntityLogEntries(analyzeRequest.getDossierTemplateId(), importedRedactions);
//merge manual changes for imported redactions
var newEntityLogsForImportedEntities = importedRedactionEntriesMergeService.mergeManualChangesForImportedRedactions(initialImportedRedactionsEntityLogEntries, analyzeRequest);
//remove the old imported redactions
List<EntityLogEntry> previousImportedRedactionsEntries = entityLog.getEntityLogEntry()
.stream()
.filter(entry -> entry.getType().equals(ImportedRedactionService.IMPORTED_REDACTION_TYPE))
.toList();
entityLog.getEntityLogEntry().removeAll(previousImportedRedactionsEntries);
// add all changes to entity log
entityLog.getEntityLogEntry().addAll(newEntityLogsForImportedEntities);
// remove all intersections and update with merged imported redactions
calculateIntersections(newEntityLogsForImportedEntities, entityLog, analyzeRequest.getAnalysisNumber());
}
private void calculateIntersections(List<EntityLogEntry> importedRedactionAndMergedEntries, EntityLog entityLog, int analysisNumber) {
if (!importedRedactionAndMergedEntries.isEmpty()) {
// imported redactions present, intersections must be added with merged imported redactions
Map<Integer, List<EntityLogEntry>> importedRedactionsMap = mapImportedRedactionsOnPage(importedRedactionAndMergedEntries);
entityLog.getEntityLogEntry().stream().filter(entry -> !entry.getType().equals(ImportedRedactionService.IMPORTED_REDACTION_TYPE)).forEach(redactionLogEntry -> {
redactionLogEntry.setImportedRedactionIntersections(new HashSet<>());
addIntersections(redactionLogEntry, importedRedactionsMap, analysisNumber);
});
}
}
@Deprecated(forRemoval = true)
private List<RedactionLogEntry> addImportedRedactionsRedactionLogEntries(String dossierTemplateId,
List<RedactionLogEntry> redactionLogEntries,
ImportedRedactions importedRedactions) {
for (var importedRedactionsValues : importedRedactions.getImportedRedactions().values()) {
for (var importedRedaction : importedRedactionsValues) {
RedactionLogEntry redactionLogEntry = RedactionLogEntry.builder()
.id(importedRedaction.getId())
.type(IMPORTED_REDACTION_TYPE)
.imported(true)
.redacted(true)
.positions(importedRedaction.getPositions().stream().map(this::normalize).collect(Collectors.toList()))
.color(getColor(IMPORTED_REDACTION_TYPE, dossierTemplateId))
.build();
redactionLogEntries.add(redactionLogEntry);
}
}
return redactionLogEntries;
}
private List<EntityLogEntry> addImportedRedactionsEntityLogEntries(String dossierTemplateId, ImportedRedactions importedRedactions) {
List<EntityLogEntry> initialImportedRedactionsEntityLogEntries = new ArrayList<>();
var now = OffsetDateTime.now();
for (var importedRedactionsValues : importedRedactions.getImportedRedactions().values()) {
for (var importedRedaction : importedRedactionsValues) {
EntityLogEntry redactionLogEntry = EntityLogEntry.builder()
.id(importedRedaction.getId())
.type(IMPORTED_REDACTION_TYPE)
.entryType(EntryType.ENTITY)
.value(Optional.ofNullable(importedRedaction.getValue()).orElse(""))
.imported(true)
.state(EntryState.APPLIED)
.positions(importedRedaction.getPositions())
.color(getColor(IMPORTED_REDACTION_TYPE, dossierTemplateId))
.containingNodeId(Collections.emptyList())
.build();
redactionLogEntry.getChanges().add(new Change(1, ChangeType.ADDED, now));
initialImportedRedactionsEntityLogEntries.add(redactionLogEntry);
}
}
return initialImportedRedactionsEntityLogEntries;
}
private List<Position> toPositions(List<Rectangle> positions) {
return positions.stream().map(this::toPosition).toList();
}
private Position toPosition(Rectangle rectangle) {
return new Position(new float[]{rectangle.getTopLeft().getX(), rectangle.getTopLeft().getY(), rectangle.getWidth(), rectangle.getHeight()}, rectangle.getPage());
}
@Deprecated(forRemoval = true)
private void addIntersections(RedactionLogEntry redactionLogEntry, ImportedRedactions importedRedactions) {
for (Rectangle rectangle : redactionLogEntry.getPositions()) {
var normalizedRectangle = normalize(rectangle);
if (importedRedactions.getImportedRedactions().containsKey(rectangle.getPage())) {
var importedRedactionsOnPage = importedRedactions.getImportedRedactions().get(rectangle.getPage());
for (ImportedRedaction importedRedaction : importedRedactionsOnPage) {
for (Position importedRedactionPosition : importedRedaction.getPositions()) {
if (rectOverlap(normalizedRectangle, normalize(importedRedactionPosition))) {
if (redactionLogEntry.getImportedRedactionIntersections() == null) {
redactionLogEntry.setImportedRedactionIntersections(new HashSet<>());
}
redactionLogEntry.getImportedRedactionIntersections().add(importedRedaction.getId());
}
}
}
}
}
}
public Map<Integer, List<EntityLogEntry>> mapImportedRedactionsOnPage(List<EntityLogEntry> importedRedactions) {
Map<Integer, List<EntityLogEntry>> importedRedactionsMap = new HashMap<>();
Set<Integer> pageNumbers = importedRedactions.stream().map(EntityLogEntry::getPositions)
.flatMap(Collection::stream)
.map(com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position::getPageNumber)
.collect(Collectors.toSet());
pageNumbers.forEach(pageNumber ->
importedRedactionsMap.put(pageNumber, importedRedactions.stream().filter(i -> pageNumber == i.getPositions().get(0).getPageNumber()).collect(Collectors.toList())));
return importedRedactionsMap;
}
public void addIntersections(EntityLogEntry entityLogEntry, Map<Integer, List<EntityLogEntry>> importedRedactionsMap, int analysisNumber) {
for (Position rectangle : entityLogEntry.getPositions()) {
var normalizedRectangle = normalize(rectangle);
if (importedRedactionsMap.containsKey(rectangle.getPageNumber())) {
var importedRedactionsOnPage = importedRedactionsMap.get(rectangle.getPageNumber());
for (EntityLogEntry importedRedactionLogEntry : importedRedactionsOnPage) {
for (Position importedRedactionPosition : importedRedactionLogEntry.getPositions()) {
if (rectOverlap(normalizedRectangle, normalize(importedRedactionPosition))) {
if (entityLogEntry.getImportedRedactionIntersections() == null) {
entityLogEntry.setImportedRedactionIntersections(new HashSet<>());
}
entityLogEntry.getImportedRedactionIntersections().add(importedRedactionLogEntry.getId());
if(entityLogEntry.getState() != EntryState.REMOVED) {
entityLogEntry.setState(EntryState.REMOVED);
entityLogEntry.getChanges().add(new Change(analysisNumber, ChangeType.REMOVED, OffsetDateTime.now()));
}
}
}
}
}
}
}
private void addIntersections(EntityLogEntry entityLogEntry, ImportedRedactions importedRedactions) {
for (Position rectangle : entityLogEntry.getPositions()) {
var normalizedRectangle = normalize(rectangle);
if (importedRedactions.getImportedRedactions().containsKey(rectangle.getPageNumber())) {
var importedRedactionsOnPage = importedRedactions.getImportedRedactions().get(rectangle.getPageNumber());
for (ImportedRedaction importedRedaction : importedRedactionsOnPage) {
for (Position importedRedactionPosition : importedRedaction.getPositions()) {
if (rectOverlap(normalizedRectangle, normalize(importedRedactionPosition))) {
if (entityLogEntry.getImportedRedactionIntersections() == null) {
entityLogEntry.setImportedRedactionIntersections(new HashSet<>());
}
entityLogEntry.getImportedRedactionIntersections().add(importedRedaction.getId());
}
}
}
}
}
}
boolean valueInRange(float value, float min, float max) {
return round(value) >= round(min) && round(value) <= round(max);
}
boolean rectOverlap(Rectangle a, Rectangle b) {
boolean xOverlap = valueInRange(a.getTopLeft().getX(), b.getTopLeft().getX(), b.getTopLeft().getX() + b.getWidth()) || valueInRange(b.getTopLeft().getX(),
a.getTopLeft().getX(),
a.getTopLeft().getX() + a.getWidth());
boolean yOverlap = valueInRange(a.getTopLeft().getY(), b.getTopLeft().getY(), b.getTopLeft().getY() + b.getHeight()) || valueInRange(b.getTopLeft().getY(),
a.getTopLeft().getY(),
a.getTopLeft().getY() + a.getHeight());
return xOverlap && yOverlap;
}
@Deprecated(forRemoval = true)
private Rectangle normalize(Rectangle rectangle) {
Rectangle r = new Rectangle();
Point p = new Point();
if (rectangle.getWidth() < 0) {
p.setX(rectangle.getTopLeft().getX() + rectangle.getWidth());
r.setWidth(Math.abs(rectangle.getWidth()));
} else {
p.setX(rectangle.getTopLeft().getX());
r.setWidth(rectangle.getWidth());
}
if (rectangle.getHeight() < 0) {
p.setY(rectangle.getTopLeft().getY() + rectangle.getHeight());
r.setHeight(Math.abs(rectangle.getHeight()));
} else {
p.setY(rectangle.getTopLeft().getY());
r.setHeight(rectangle.getHeight());
}
r.setTopLeft(p);
r.setPage(rectangle.getPage());
return r;
}
private Rectangle normalize(Position position) {
Rectangle r = new Rectangle();
Point p = new Point();
if (position.getRectangle()[2] < 0) {
p.setX(position.getRectangle()[0] + position.getRectangle()[2]);
r.setWidth(Math.abs(position.getRectangle()[2]));
} else {
p.setX(position.getRectangle()[0]);
r.setWidth(position.getRectangle()[2]);
}
if (position.getRectangle()[3] < 0) {
p.setY(position.getRectangle()[1] + position.getRectangle()[3]);
r.setHeight(Math.abs(position.getRectangle()[3]));
} else {
p.setY(position.getRectangle()[1]);
r.setHeight(position.getRectangle()[3]);
}
r.setTopLeft(p);
r.setPage(position.getPageNumber());
return r;
}
private float round(float value) {
double d = Math.pow(10, 0);
return (float) (Math.round(value * d) / d);
}
private float[] getColor(String type, String dossierTemplateId) {
return dictionaryService.getColor(type, dossierTemplateId);
}
}
@@ -2,9 +2,10 @@ package com.iqser.red.service.redaction.v1.server.service;
import java.time.OffsetDateTime;
import java.util.List;
import java.util.stream.Collectors;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualForceRedaction;
@@ -12,31 +13,34 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType;
@Service
import lombok.experimental.UtilityClass;
@UtilityClass
public class ManualChangeFactory {
public List<ManualChange> toManualChangeList(List<BaseAnnotation> manualChanges, boolean isHint) {
return manualChanges.stream().map(baseAnnotation -> toManualChange(baseAnnotation, isHint)).toList();
return manualChanges.stream()
.map(baseAnnotation -> toManualChange(baseAnnotation, isHint))
.collect(Collectors.toList());
}
private ManualChange toManualChange(BaseAnnotation baseAnnotation, boolean isHint) {
public ManualChange toManualChange(BaseAnnotation baseAnnotation, boolean isHint) {
ManualChange manualChange = ManualChange.from(baseAnnotation);
if (baseAnnotation instanceof ManualRecategorization imageRecategorization) {
manualChange.withManualRedactionType(ManualRedactionType.RECATEGORIZE).withChange("type", imageRecategorization.getType());
} else if (baseAnnotation instanceof IdRemoval manualRemoval) {
manualChange.withManualRedactionType(manualRemoval.isRemoveFromDictionary() ? ManualRedactionType.REMOVE_FROM_DICTIONARY : ManualRedactionType.REMOVE_LOCALLY);
} else if (baseAnnotation instanceof ManualForceRedaction) {
manualChange.withManualRedactionType(isHint ? ManualRedactionType.FORCE_HINT : ManualRedactionType.FORCE_REDACT);
manualChange.withManualRedactionType(manualRemoval.isRemoveFromDictionary() ? ManualRedactionType.REMOVE_FROM_DICTIONARY : ManualRedactionType.REMOVE);
} else if (baseAnnotation instanceof ManualForceRedaction manualForceRedaction) {
manualChange.withManualRedactionType(ManualRedactionType.FORCE).withChange("legalBasis", manualForceRedaction.getLegalBasis());
} else if (baseAnnotation instanceof ManualResizeRedaction manualResizeRedact) {
manualChange.withManualRedactionType(ManualRedactionType.RESIZE).withChange("value", manualResizeRedact.getValue());
manualChange.withManualRedactionType(manualResizeRedact.getUpdateDictionary() ? ManualRedactionType.RESIZE_IN_DICTIONARY : ManualRedactionType.RESIZE)
.withChange("value", manualResizeRedact.getValue());
} else if (baseAnnotation instanceof ManualRedactionEntry manualRedactionEntry) {
manualChange.withManualRedactionType(manualRedactionEntry.isAddToDictionary() ? ManualRedactionType.ADD_TO_DICTIONARY : ManualRedactionType.ADD_LOCALLY)
manualChange.withManualRedactionType(manualRedactionEntry.isAddToDictionary() ? ManualRedactionType.ADD_TO_DICTIONARY : ManualRedactionType.ADD)
.withChange("value", manualRedactionEntry.getValue());
} else if (baseAnnotation instanceof ManualLegalBasisChange manualLegalBasisChange) {
manualChange.withManualRedactionType(ManualRedactionType.LEGAL_BASIS_CHANGE)
@@ -16,7 +16,7 @@ import org.springframework.stereotype.Service;
import com.google.common.collect.Sets;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.IEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
@@ -78,8 +78,10 @@ public class ManualChangesApplicationService {
.map(ManualChangesApplicationService::toRectangle2D)
.collect(Collectors.toList()));
entityToBeResized.getManualOverwrite().addChange(manualResizeRedaction);
SemanticNode node = entityToBeResized.getDeepestFullyContainingNode();
ManualEntity searchEntity = ManualEntity.fromManualResizeRedaction(manualResizeRedaction);
PrecursorEntity searchEntity = PrecursorEntity.fromManualResizeRedaction(manualResizeRedaction);
// Loop through nodes starting from the deepest fully containing node all the way to the document node
while (node != null) {
@@ -125,7 +127,6 @@ public class ManualChangesApplicationService {
entityToBeResized.setDuplicateTextRanges(new ArrayList<>(closestEntity.getDuplicateTextRanges()));
entityToBeResized.setValue(closestEntity.getValue());
entityToBeResized.setPages(newIntersectingPages);
entityToBeResized.getManualOverwrite().addChange(manualResizeRedaction);
}
@@ -0,0 +1,102 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.time.OffsetDateTime;
import java.util.Collection;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryState;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.RectangleWithPage;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import org.springframework.stereotype.Service;
import io.micrometer.core.annotation.Timed;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Service
@Slf4j
@RequiredArgsConstructor
public class NotFoundImportedEntitiesService {
public static final String IMPORTED_REDACTION_TYPE = "imported_redaction";
@Timed("redactmanager_processEntityLog")
public void processEntityLog(EntityLog entityLog, AnalyzeRequest analyzeRequest, List<PrecursorEntity> notFoundEntities) {
// recreate imported redactions with manual changes
if (notFoundEntities == null || notFoundEntities.isEmpty()) {
log.debug("checkForImportedRedactions - no not found imported entities");
return;
}
// remove all intersections and update imported entities
calculateIntersectionsForNotFound(notFoundEntities, entityLog, analyzeRequest.getAnalysisNumber());
}
private void calculateIntersectionsForNotFound(List<PrecursorEntity> notFoundEntities, EntityLog entityLog, int analysisNumber) {
if (!notFoundEntities.isEmpty()) {
// imported redactions present, intersections must be added with merged imported redactions
Map<Integer, List<PrecursorEntity>> importedRedactionsMap = mapImportedRedactionsOnPage(notFoundEntities);
entityLog.getEntityLogEntry().stream().filter(entry -> !entry.getEngines().contains(Engine.IMPORTED)).forEach(redactionLogEntry -> {
redactionLogEntry.setImportedRedactionIntersections(new HashSet<>());
addIntersections(redactionLogEntry, importedRedactionsMap, analysisNumber);
});
}
}
public Map<Integer, List<PrecursorEntity>> mapImportedRedactionsOnPage(List<PrecursorEntity> importedEntities) {
Map<Integer, List<PrecursorEntity>> importedRedactionsMap = new HashMap<>();
Set<Integer> pageNumbers = importedEntities.stream()
.map(PrecursorEntity::getEntityPosition)
.flatMap(Collection::stream)
.map(RectangleWithPage::pageNumber)
.collect(Collectors.toSet());
pageNumbers.forEach(pageNumber -> importedRedactionsMap.put(pageNumber,
importedEntities.stream().filter(i -> pageNumber == i.getEntityPosition().get(0).pageNumber()).collect(Collectors.toList())));
return importedRedactionsMap;
}
public void addIntersections(EntityLogEntry entityLogEntry, Map<Integer, List<PrecursorEntity>> importedEntitiesMap, int analysisNumber) {
for (Position rectangle : entityLogEntry.getPositions()) {
if (importedEntitiesMap.containsKey(rectangle.getPageNumber())) {
var importedEntitiesOnPage = importedEntitiesMap.get(rectangle.getPageNumber());
for (PrecursorEntity precursorEntity : importedEntitiesOnPage) {
for (RectangleWithPage rectangleWithPage : precursorEntity.getEntityPosition()) {
if (rectangle.toRectangle2D().intersects(rectangleWithPage.rectangle2D())) {
if (entityLogEntry.getImportedRedactionIntersections() == null) {
entityLogEntry.setImportedRedactionIntersections(new HashSet<>());
}
entityLogEntry.getImportedRedactionIntersections().add(precursorEntity.getId());
if (entityLogEntry.getState() != EntryState.REMOVED) {
entityLogEntry.setState(EntryState.REMOVED);
entityLogEntry.getChanges().add(new Change(analysisNumber, ChangeType.REMOVED, OffsetDateTime.now()));
}
}
}
}
}
}
}
}
@@ -1,125 +0,0 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.time.OffsetDateTime;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Change;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogChanges;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import io.micrometer.core.annotation.Timed;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Deprecated(forRemoval = true)
@Slf4j
@Service
@RequiredArgsConstructor
public class RedactionChangeLogService {
private final RedactionStorageService redactionStorageService;
@Timed("redactmanager_computeChanges")
public RedactionLogChanges computeChanges(RedactionLog previousRedactionLog, RedactionLog currentRedactionLog, int analysisNumber) {
long start = System.currentTimeMillis();
if (previousRedactionLog == null) {
currentRedactionLog.getRedactionLogEntry().forEach(entry -> {
entry.getChanges().add(new Change(analysisNumber, ChangeType.ADDED, OffsetDateTime.now()));
});
return new RedactionLogChanges(currentRedactionLog, false);
}
List<RedactionLogEntry> previouslyExistingEntries = previousRedactionLog.getRedactionLogEntry().stream().filter(entry -> !entry.lastChangeIsRemoved()).toList();
Map<String, RedactionLogEntry> addedEntryIds = getEntriesThatExistInCurrentButNotInPreviousRedactionLog(currentRedactionLog, previouslyExistingEntries);
Set<String> removedIds = getEntryIdsThatExistInPreviousButNotInCurrentRedactionLog(currentRedactionLog, previouslyExistingEntries);
List<RedactionLogEntry> newRedactionLogEntries = previousRedactionLog.getRedactionLogEntry();
List<RedactionLogEntry> toRemove = new ArrayList<>();
newRedactionLogEntries.forEach(entry -> {
if (removedIds.contains(entry.getId()) && addedEntryIds.containsKey(entry.getId())) {
List<Change> changes = entry.getChanges();
changes.add(new Change(analysisNumber, ChangeType.CHANGED, OffsetDateTime.now()));
var newEntry = addedEntryIds.get(entry.getId());
newEntry.setChanges(changes);
addedEntryIds.put(entry.getId(), newEntry);
toRemove.add(entry);
} else if (removedIds.contains(entry.getId())) {
entry.getChanges().add(new Change(analysisNumber, ChangeType.REMOVED, OffsetDateTime.now()));
} else if (addedEntryIds.containsKey(entry.getId())) {
List<Change> changes = entry.getChanges();
changes.add(new Change(analysisNumber, ChangeType.ADDED, OffsetDateTime.now()));
var newEntry = addedEntryIds.get(entry.getId());
newEntry.setChanges(changes);
addedEntryIds.put(entry.getId(), newEntry);
toRemove.add(entry);
}
});
newRedactionLogEntries.removeAll(toRemove);
addedEntryIds.forEach((k, v) -> {
if (v.getChanges().isEmpty()) {
v.getChanges().add(new Change(analysisNumber, ChangeType.ADDED, OffsetDateTime.now()));
}
newRedactionLogEntries.add(v);
});
currentRedactionLog.setRedactionLogEntry(newRedactionLogEntries);
log.debug("Change computation took: {}", System.currentTimeMillis() - start);
return new RedactionLogChanges(currentRedactionLog, !addedEntryIds.isEmpty() || !removedIds.isEmpty());
}
private static Set<String> getEntryIdsThatExistInPreviousButNotInCurrentRedactionLog(RedactionLog currentRedactionLog, List<RedactionLogEntry> previouslyExistingEntries) {
Set<RedactionLogEntry> removed = new HashSet<>(previouslyExistingEntries);
currentRedactionLog.getRedactionLogEntry().forEach(removed::remove);
Set<String> removedIds = removed.stream().map(RedactionLogEntry::getId).collect(Collectors.toSet());
return removedIds;
}
private static Map<String, RedactionLogEntry> getEntriesThatExistInCurrentButNotInPreviousRedactionLog(RedactionLog currentRedactionLog,
List<RedactionLogEntry> previouslyExistingEntries) {
Set<RedactionLogEntry> currentExistingEntries = currentRedactionLog.getRedactionLogEntry()
.stream()
.filter(entry -> (entry.getChanges().isEmpty() || !entry.lastChangeIsRemoved()) && !isLastManualChangeRemove(entry))
.collect(Collectors.toSet());
previouslyExistingEntries.forEach(currentExistingEntries::remove);
Map<String, RedactionLogEntry> addedIds = new HashMap<>();
currentExistingEntries.forEach(entry -> {
addedIds.put(entry.getId(), entry);
});
return addedIds;
}
private static boolean isLastManualChangeRemove(RedactionLogEntry redactionLogEntry){
if(redactionLogEntry.getManualChanges() == null || redactionLogEntry.getManualChanges().isEmpty()){
return false;
}
return redactionLogEntry.getManualChanges().get(redactionLogEntry.getManualChanges().size() -1).getManualRedactionType() == ManualRedactionType.REMOVE_LOCALLY;
}
}
@@ -1,259 +0,0 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.awt.geom.Rectangle2D;
import java.util.ArrayList;
import java.util.Collections;
import java.util.HashSet;
import java.util.List;
import java.util.Locale;
import java.util.Objects;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.beans.BeanUtils;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.AnnotationStatus;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Point;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.IEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.ManualChangeOverwrite;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Image;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.ImageType;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Deprecated(forRemoval = true)
@Service
@Slf4j
@RequiredArgsConstructor
public class RedactionLogCreatorService {
private final DictionaryService dictionaryService;
private final ManualChangeFactory manualChangeFactory;
public List<RedactionLogEntry> createRedactionLog(Document document, String dossierTemplateId, List<ManualEntity> notFoundManualRedactionEntries) {
List<RedactionLogEntry> entries = new ArrayList<>();
Set<String> processIds = new HashSet<>();
document.getEntities()
.stream()
.filter(entity -> !entity.getValue().isEmpty())
.filter(RedactionLogCreatorService::notFalsePositiveOrFalseRecommendation)
.filter(IEntity::active)
.forEach(entityNode -> entries.addAll(toRedactionLogEntries(entityNode, dossierTemplateId, processIds)));
document.streamAllImages().filter(image -> !image.removed()).forEach(imageNode -> entries.add(createRedactionLogEntry(imageNode, dossierTemplateId)));
notFoundManualRedactionEntries.forEach(entityIdentifier -> entries.add(createRedactionLogEntry(entityIdentifier, dossierTemplateId)));
return entries;
}
private static boolean notFalsePositiveOrFalseRecommendation(TextEntity textEntity) {
return !(textEntity.getEntityType() == EntityType.FALSE_POSITIVE || textEntity.getEntityType() == EntityType.FALSE_RECOMMENDATION);
}
private List<RedactionLogEntry> toRedactionLogEntries(TextEntity textEntity, String dossierTemplateId, Set<String> processedIds) {
List<RedactionLogEntry> redactionLogEntities = new ArrayList<>();
for (PositionOnPage positionOnPage : textEntity.getPositionsOnPagePerPage()) {
// Duplicates should be removed. They might exist due to table extraction duplicating cells spanning multiple columns/rows.
if (processedIds.contains(positionOnPage.getId())) {
continue;
}
processedIds.add(positionOnPage.getId());
RedactionLogEntry redactionLogEntry = createRedactionLogEntry(textEntity, dossierTemplateId);
redactionLogEntry.setId(positionOnPage.getId());
List<Rectangle> rectanglesPerLine = positionOnPage.getRectanglePerLine()
.stream()
.map(rectangle2D -> toRedactionLogRectangle(rectangle2D, positionOnPage.getPage().getNumber()))
.toList();
redactionLogEntry.setPositions(rectanglesPerLine);
redactionLogEntities.add(redactionLogEntry);
}
return redactionLogEntities;
}
private RedactionLogEntry createRedactionLogEntry(TextEntity entity, String dossierTemplateId) {
Set<String> referenceIds = new HashSet<>();
entity.references().stream().filter(TextEntity::active).forEach(ref -> ref.getPositionsOnPagePerPage().forEach(pos -> referenceIds.add(pos.getId())));
int sectionNumber = entity.getDeepestFullyContainingNode().getTreeId().isEmpty() ? 0 : entity.getDeepestFullyContainingNode().getTreeId().get(0);
boolean isHint = isHint(entity.getEntityType());
return RedactionLogEntry.builder()
.color(getColor(entity.type(), dossierTemplateId, entity.applied(), isHint))
.reason(entity.buildReasonWithManualChangeDescriptions())
.legalBasis(entity.legalBasis())
.value(entity.getManualOverwrite().getValue().orElse(entity.getMatchedRule().isWriteValueWithLineBreaks() ? entity.getValueWithLineBreaks() : entity.getValue()))
.type(entity.type())
.redacted(entity.applied())
.isHint(isHint)
.isRecommendation(entity.getEntityType().equals(EntityType.RECOMMENDATION))
.isFalsePositive(entity.getEntityType().equals(EntityType.FALSE_POSITIVE) || entity.getEntityType().equals(EntityType.FALSE_RECOMMENDATION))
.section(entity.getManualOverwrite().getSection().orElse(entity.getDeepestFullyContainingNode().toString()))
.sectionNumber(sectionNumber)
.matchedRule(entity.getMatchedRule().getRuleIdentifier().toString())
.isDictionaryEntry(entity.isDictionaryEntry())
.textAfter(entity.getTextAfter())
.textBefore(entity.getTextBefore())
.startOffset(entity.getTextRange().start())
.endOffset(entity.getTextRange().end())
.isDossierDictionaryEntry(entity.isDossierDictionaryEntry())
.engines(getEngines(entity))
.reference(referenceIds)
.manualChanges(mapManualChanges(entity.getManualOverwrite(), isHint))
.build();
}
private Set<Engine> getEngines(TextEntity entity) {
return entity.getEngines() != null ? mapToEngines(entity.getEngines()) : Collections.emptySet();
}
private Set<Engine> mapToEngines(Set<com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine> engines) {
return engines.stream().map(engine -> switch (engine) {
case NER -> Engine.NER;
case RULE -> Engine.RULE;
case DICTIONARY -> Engine.DICTIONARY;
default -> null;
}).filter(Objects::nonNull).collect(Collectors.toSet());
}
private boolean isHint(EntityType entityType) {
return entityType.equals(EntityType.HINT);
}
private List<ManualChange> mapManualChanges(ManualChangeOverwrite manualEntity, boolean isHint) {
return manualChangeFactory.toManualChangeList(manualEntity.getManualChangeLog(), isHint).stream().map(this::mapManualChange).toList();
}
private ManualChange mapManualChange(com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange manualChange) {
ManualChange manualChange1 = new ManualChange();
BeanUtils.copyProperties(manualChange, manualChange1);
manualChange1.setManualRedactionType(switch (manualChange.getManualRedactionType()) {
case ADD_LOCALLY -> ManualRedactionType.ADD_LOCALLY;
case ADD_TO_DICTIONARY -> ManualRedactionType.ADD_TO_DICTIONARY;
case REMOVE_LOCALLY -> ManualRedactionType.REMOVE_LOCALLY;
case REMOVE_FROM_DICTIONARY -> ManualRedactionType.REMOVE_FROM_DICTIONARY;
case FORCE_REDACT -> ManualRedactionType.FORCE_REDACT;
case FORCE_HINT -> ManualRedactionType.FORCE_HINT;
case RECATEGORIZE -> ManualRedactionType.RECATEGORIZE;
case LEGAL_BASIS_CHANGE -> ManualRedactionType.LEGAL_BASIS_CHANGE;
case RESIZE -> ManualRedactionType.RESIZE;
});
manualChange1.setProcessedDate(manualChange.getProcessedDate());
manualChange1.setRequestedDate(manualChange.getRequestedDate());
manualChange1.setPropertyChanges(manualChange.getPropertyChanges());
manualChange1.setAnnotationStatus(AnnotationStatus.APPROVED);
return manualChange1;
}
private float[] getColor(String type, String dossierTemplateId, boolean isRedaction, boolean isHint) {
if (!isRedaction && isHint) {
return dictionaryService.getNotRedactedColor(dossierTemplateId);
}
return dictionaryService.getColor(type, dossierTemplateId);
}
public RedactionLogEntry createRedactionLogEntry(Image image, String dossierTemplateId) {
String imageType = image.getImageType().equals(ImageType.OTHER) ? "image" : image.getImageType().toString().toLowerCase(Locale.ENGLISH);
boolean isHint = dictionaryService.isHint(imageType, dossierTemplateId);
return RedactionLogEntry.builder()
.id(image.getId())
.color(getColor(imageType, dossierTemplateId, image.applied(), isHint))
.isImage(true)
.value(image.value())
.type(imageType)
.redacted(image.applied())
.reason(image.buildReasonWithManualChangeDescriptions())
.legalBasis(image.legalBasis())
.matchedRule(image.getMatchedRule().getRuleIdentifier().toString())
.isHint(isHint)
.isDictionaryEntry(false)
.isRecommendation(false)
.positions(List.of(toRedactionLogRectangle(image.getPosition(), image.getPage().getNumber())))
.sectionNumber(image.getTreeId().get(0))
.section(image.getManualOverwrite().getSection().orElse(image.getParent().toString()))
.imageHasTransparency(image.isTransparent())
.manualChanges(mapManualChanges(image.getManualOverwrite(), isHint))
.build();
}
private Rectangle toRedactionLogRectangle(Rectangle2D rectangle2D, int pageNumber) {
return new Rectangle(new Point((float) rectangle2D.getMinX(), (float) rectangle2D.getMinY()), (float) rectangle2D.getWidth(), (float) rectangle2D.getHeight(), pageNumber);
}
public RedactionLogEntry createRedactionLogEntry(ManualEntity manualEntity, String dossierTemplateId) {
String type = manualEntity.getManualOverwrite().getType().orElse(manualEntity.getType());
boolean isHint = isHint(manualEntity.getEntityType());
return RedactionLogEntry.builder()
.id(manualEntity.getId())
.color(getColor(type, dossierTemplateId, manualEntity.applied(), isHint))
.reason(manualEntity.buildReasonWithManualChangeDescriptions())
.legalBasis(manualEntity.legalBasis())
.value(manualEntity.value())
.type(type)
.redacted(manualEntity.applied())
.isHint(isHint)
.isRecommendation(manualEntity.getEntityType().equals(EntityType.RECOMMENDATION))
.isFalsePositive(manualEntity.getEntityType().equals(EntityType.FALSE_POSITIVE) || manualEntity.getEntityType().equals(EntityType.FALSE_RECOMMENDATION))
.section(manualEntity.getManualOverwrite().getSection().orElse(manualEntity.getSection()))
.sectionNumber(0)
.matchedRule(manualEntity.getMatchedRule().getRuleIdentifier().toString())
.rectangle(manualEntity.isRectangle())
.isDictionaryEntry(manualEntity.isDictionaryEntry())
.isDossierDictionaryEntry(manualEntity.isDossierDictionaryEntry())
.textAfter("")
.textBefore("")
.startOffset(-1)
.endOffset(-1)
.positions(manualEntity.getManualOverwrite()
.getPositions()
.orElse(manualEntity.getEntityPosition())
.stream()
.map(entityPosition -> toRedactionLogRectangle(entityPosition.rectangle2D(), entityPosition.pageNumber()))
.toList())
.engines(Collections.emptySet())
.reference(Collections.emptySet())
.manualChanges(mapManualChanges(manualEntity.getManualOverwrite(), isHint))
.build();
}
}
@@ -16,27 +16,22 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequ
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.redaction.v1.model.AnalyzeResponse;
import com.iqser.red.service.redaction.v1.model.QueueNames;
import com.iqser.red.service.redaction.v1.model.UnprocessedManualEntity;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.service.document.DocumentGraphMapper;
import com.iqser.red.service.redaction.v1.server.service.document.EntityCreationService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityEnrichmentService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityFindingUtility;
import com.iqser.red.service.redaction.v1.server.service.document.ManualEntityCreationService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityFromPrecursorCreationService;
import com.iqser.red.service.redaction.v1.server.storage.ObservedStorageService;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import io.micrometer.observation.annotation.Observed;
import jakarta.annotation.PostConstruct;
import lombok.AccessLevel;
import lombok.RequiredArgsConstructor;
import lombok.experimental.FieldDefaults;
@@ -54,20 +49,10 @@ public class UnprocessedChangesService {
final ObservedStorageService observedStorageService;
final EntityFindingUtility entityFindingUtility;
final RedactionStorageService redactionStorageService;
final EntityEnrichmentService entityEnrichmentService;
final ManualEntityCreationService manualEntityCreationService;
final EntityFromPrecursorCreationService entityFromPrecursorCreationService;
final DictionaryService dictionaryService;
final ManualChangesApplicationService manualChangesApplicationService;
EntityCreationService entityCreationService;
@PostConstruct
public void initEntityCreationService() {
entityCreationService = new EntityCreationService(entityEnrichmentService);
}
@Observed(name = "UnprocessedChangesService", contextualName = "analyse-surrounding-text")
public void analyseSurroundingText(AnalyzeRequest analyzeRequest) {
@@ -79,76 +64,93 @@ public class UnprocessedChangesService {
EntityLog previousEntityLog = redactionStorageService.getEntityLog(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
Document document = DocumentGraphMapper.toDocumentGraph(observedStorageService.getDocumentData(analyzeRequest.getDossierId(), analyzeRequest.getFileId()));
Set<String> allAnnotationIds = analyzeRequest.getManualRedactions().getEntriesToAdd().stream().map(ManualRedactionEntry::getAnnotationId).collect(Collectors.toSet());
Set<String> resizeIds = analyzeRequest.getManualRedactions().getResizeRedactions().stream().map(ManualResizeRedaction::getAnnotationId).collect(Collectors.toSet());
Set<String> allAnnotationIds = analyzeRequest.getManualRedactions().getEntriesToAdd()
.stream()
.map(ManualRedactionEntry::getAnnotationId)
.collect(Collectors.toSet());
Set<String> resizeIds = analyzeRequest.getManualRedactions().getResizeRedactions()
.stream()
.map(ManualResizeRedaction::getAnnotationId)
.collect(Collectors.toSet());
allAnnotationIds.addAll(resizeIds);
List<ManualResizeRedaction> manualResizeRedactions = analyzeRequest.getManualRedactions().getResizeRedactions().stream().toList();
List<ManualEntity> manualEntitiesToBeResized = previousEntityLog.getEntityLogEntry()
.stream().filter(entityLogEntry -> resizeIds.contains(entityLogEntry.getId())).toList()
.stream().map(ManualEntity::fromEntityLogEntry).toList();
List<ManualResizeRedaction> manualResizeRedactions = analyzeRequest.getManualRedactions().getResizeRedactions()
.stream()
.toList();
List<PrecursorEntity> manualEntitiesToBeResized = previousEntityLog.getEntityLogEntry()
.stream()
.filter(entityLogEntry -> resizeIds.contains(entityLogEntry.getId()))
.toList()
.stream()
.map(PrecursorEntity::fromEntityLogEntry)
.toList();
if (!manualResizeRedactions.isEmpty()) {
processManualResizeRedactions(document, manualEntitiesToBeResized, unprocessedManualEntities, manualResizeRedactions);
}
List<ManualEntity> notFoundManualEntities = new ArrayList<>();
List<ManualEntity> manualEntities = manualEntitiesConverter(analyzeRequest.getManualRedactions(), analyzeRequest.getDossierTemplateId());
List<PrecursorEntity> notFoundManualEntities = new ArrayList<>();
List<PrecursorEntity> manualEntities = manualEntitiesConverter(analyzeRequest.getManualRedactions(), analyzeRequest.getDossierTemplateId());
if (!manualEntities.isEmpty()) {
notFoundManualEntities = manualEntityCreationService.toTextEntity(manualEntities, document);
notFoundManualEntities = entityFromPrecursorCreationService.toTextEntity(manualEntities, document);
}
document.getEntities().forEach(textEntity -> {
Set<String> processedIds = new HashSet<>();
for (var positionsOnPerPage : textEntity.getPositionsOnPagePerPage()) {
if (processedIds.contains(positionsOnPerPage.getId())) {
continue;
}
processedIds.add(positionsOnPerPage.getId());
List<Position> positions = positionsOnPerPage.getRectanglePerLine()
.stream()
.map(rectangle2D -> new Position(rectangle2D, positionsOnPerPage.getPage().getNumber()))
.collect(Collectors.toList());
unprocessedManualEntities.add(UnprocessedManualEntity.builder()
.annotationId(allAnnotationIds.stream().filter(textEntity::matchesAnnotationId).findFirst().orElse(""))
.textBefore(textEntity.getTextBefore())
.textAfter(textEntity.getTextAfter())
.section(textEntity.getManualOverwrite().getSection().orElse(textEntity.getDeepestFullyContainingNode().toString()))
.positions(positions)
.build());
}
});
document.getEntities()
.forEach(textEntity -> {
Set<String> processedIds = new HashSet<>();
for (var positionsOnPerPage : textEntity.getPositionsOnPagePerPage()) {
if (processedIds.contains(positionsOnPerPage.getId())) {
continue;
}
processedIds.add(positionsOnPerPage.getId());
List<Position> positions = positionsOnPerPage.getRectanglePerLine()
.stream()
.map(rectangle2D -> new Position(rectangle2D, positionsOnPerPage.getPage().getNumber()))
.collect(Collectors.toList());
unprocessedManualEntities.add(UnprocessedManualEntity.builder()
.annotationId(allAnnotationIds.stream()
.filter(textEntity::matchesAnnotationId)
.findFirst()
.orElse(""))
.textBefore(textEntity.getTextBefore())
.textAfter(textEntity.getTextAfter())
.section(textEntity.getManualOverwrite().getSection()
.orElse(textEntity.getDeepestFullyContainingNode().toString()))
.positions(positions)
.build());
}
});
notFoundManualEntities.forEach(manualEntity -> unprocessedManualEntities.add(builDefaultUnprocessedManualEntity(manualEntity)));
rabbitTemplate.convertAndSend(QueueNames.REDACTION_ANALYSIS_RESPONSE_QUEUE,
AnalyzeResponse.builder().fileId(analyzeRequest.getFileId()).unprocessedManualEntities(unprocessedManualEntities).build());
AnalyzeResponse.builder().fileId(analyzeRequest.getFileId()).unprocessedManualEntities(unprocessedManualEntities).build());
}
private void processManualResizeRedactions(Document document,
List<ManualEntity> manualEntities,
List<PrecursorEntity> manualEntities,
List<UnprocessedManualEntity> unprocessedManualEntities,
List<ManualResizeRedaction> manualResizeRedactions) {
Map<String, List<TextEntity>> tempEntities = entityFindingUtility.findAllPossibleEntitiesAndGroupByValue(document, manualEntities);
for (ManualEntity manualEntity : manualEntities) {
for (PrecursorEntity precursorEntity : manualEntities) {
Optional<TextEntity> optionalTextEntity = entityFindingUtility.findClosestEntityAndReturnEmptyIfNotFound(manualEntity, tempEntities, THRESHOLD);
Optional<TextEntity> optionalTextEntity = entityFindingUtility.findClosestEntityAndReturnEmptyIfNotFound(precursorEntity, tempEntities, THRESHOLD);
if (optionalTextEntity.isEmpty()) {
unprocessedManualEntities.add(builDefaultUnprocessedManualEntity(manualEntity));
unprocessedManualEntities.add(builDefaultUnprocessedManualEntity(precursorEntity));
continue;
}
TextEntity correctEntity = createCorrectEntity(manualEntity, optionalTextEntity.get());
TextEntity correctEntity = EntityFromPrecursorCreationService.createCorrectEntity(precursorEntity, optionalTextEntity.get());
Optional<ManualResizeRedaction> optionalManualResizeRedaction = manualResizeRedactions.stream()
.filter(manualResizeRedaction -> manualResizeRedaction.getAnnotationId().equals(manualEntity.getId()))
.filter(manualResizeRedaction -> manualResizeRedaction.getAnnotationId().equals(precursorEntity.getId()))
.findFirst();
if (optionalManualResizeRedaction.isPresent()) {
ManualResizeRedaction manualResizeRedaction = optionalManualResizeRedaction.get();
manualChangesApplicationService.resizeEntityAndReinsert(correctEntity, manualResizeRedaction);
manualChangesApplicationService.resize(correctEntity, manualResizeRedaction);
// If the entity's value is not the same as the manual resize request's value it means we didn't find it anywhere and we want to remove it
// from the graph, so it does not get processed and sent back to persistence-service to update its value.
@@ -156,63 +158,40 @@ public class UnprocessedChangesService {
correctEntity.removeFromGraph();
}
}
}
// remove all temp entities from the graph
tempEntities.values().stream().flatMap(Collection::stream).forEach(TextEntity::removeFromGraph);
tempEntities.values()
.stream()
.flatMap(Collection::stream)
.forEach(TextEntity::removeFromGraph);
}
private TextEntity createCorrectEntity(ManualEntity manualEntity, TextEntity closestEntity) {
TextEntity correctEntity = TextEntity.initialEntityNode(closestEntity.getTextRange(), manualEntity.type(), manualEntity.getEntityType(), manualEntity.getId());
correctEntity.setDeepestFullyContainingNode(closestEntity.getDeepestFullyContainingNode());
correctEntity.setIntersectingNodes(new ArrayList<>(closestEntity.getIntersectingNodes()));
correctEntity.setDuplicateTextRanges(new ArrayList<>(closestEntity.getDuplicateTextRanges()));
correctEntity.setPages(new HashSet<>(closestEntity.getPages()));
correctEntity.setValue(closestEntity.getValue());
correctEntity.setTextAfter(closestEntity.getTextAfter());
correctEntity.setTextBefore(closestEntity.getTextBefore());
correctEntity.getIntersectingNodes().forEach(n -> n.getEntities().add(correctEntity));
correctEntity.getPages().forEach(page -> page.getEntities().add(correctEntity));
correctEntity.addMatchedRules(manualEntity.getMatchedRuleList());
correctEntity.setDictionaryEntry(manualEntity.isDictionaryEntry());
correctEntity.setDossierDictionaryEntry(manualEntity.isDossierDictionaryEntry());
correctEntity.getManualOverwrite().addChanges(manualEntity.getManualOverwrite().getManualChangeLog());
return correctEntity;
}
private UnprocessedManualEntity builDefaultUnprocessedManualEntity(ManualEntity manualEntity) {
private UnprocessedManualEntity builDefaultUnprocessedManualEntity(PrecursorEntity precursorEntity) {
return UnprocessedManualEntity.builder()
.annotationId(manualEntity.getId())
.annotationId(precursorEntity.getId())
.textAfter("")
.textBefore("")
.section("")
.positions(manualEntity.getManualOverwrite()
.getPositions()
.orElse(manualEntity.getEntityPosition())
.stream()
.map(entityPosition -> new Position(entityPosition.rectangle2D(), entityPosition.pageNumber()))
.toList())
.positions(precursorEntity.getManualOverwrite().getPositions()
.orElse(precursorEntity.getEntityPosition())
.stream()
.map(entityPosition -> new Position(entityPosition.rectangle2D(), entityPosition.pageNumber()))
.toList())
.build();
}
private List<ManualEntity> manualEntitiesConverter(ManualRedactions manualRedactions, String dossierTemplateId) {
private List<PrecursorEntity> manualEntitiesConverter(ManualRedactions manualRedactions, String dossierTemplateId) {
return manualRedactions.getEntriesToAdd()
.stream()
.filter(manualRedactionEntry -> manualRedactionEntry.getPositions() != null && !manualRedactionEntry.getPositions().isEmpty())
.map(manualRedactionEntry -> ManualEntity.fromManualRedactionEntry(manualRedactionEntry,
dictionaryService.isHint(manualRedactionEntry.getType(), dossierTemplateId)))
.filter(BaseAnnotation::isLocal)
.map(manualRedactionEntry -> PrecursorEntity.fromManualRedactionEntry(manualRedactionEntry,
dictionaryService.isHint(manualRedactionEntry.getType(), dossierTemplateId)))
.toList();
}
@@ -6,6 +6,7 @@ import java.util.LinkedList;
import java.util.List;
import java.util.Map;
import java.util.NoSuchElementException;
import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Footer;
@@ -76,6 +77,7 @@ public class DocumentGraphMapper {
node.setLeafTextBlock(textBlock);
}
List<Integer> treeId = Arrays.stream(entryData.getTreeId()).boxed().toList();
entryData.getEngines().forEach(engine -> node.addEngine(engine));
node.setTreeId(treeId);
switch (entryData.getType()) {
@@ -19,7 +19,7 @@ import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
import com.iqser.red.service.redaction.v1.server.model.ClosestEntity;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.RectangleWithPage;
import com.iqser.red.service.redaction.v1.server.model.dictionary.SearchImplementation;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
@@ -47,35 +47,35 @@ public class EntityFindingUtility {
}
public Optional<TextEntity> findClosestEntityAndReturnEmptyIfNotFound(ManualEntity manualEntity, Map<String, List<TextEntity>> entitiesWithSameValue, double matchThreshold) {
public Optional<TextEntity> findClosestEntityAndReturnEmptyIfNotFound(PrecursorEntity precursorEntity, Map<String, List<TextEntity>> entitiesWithSameValue, double matchThreshold) {
if (manualEntity.getValue() == null) {
if (precursorEntity.getValue() == null) {
return Optional.empty();
}
List<TextEntity> possibleEntities = entitiesWithSameValue.get(manualEntity.getValue().toLowerCase(Locale.ENGLISH));
List<TextEntity> possibleEntities = entitiesWithSameValue.get(precursorEntity.getValue().toLowerCase(Locale.ENGLISH));
if (entityIdentifierValueNotFound(possibleEntities)) {
log.warn("Entity could not be created with manualEntity: {}, due to the value {} not being found anywhere.", manualEntity, manualEntity.getValue());
log.warn("Entity could not be created with precursorEntity: {}, due to the value {} not being found anywhere.", precursorEntity, precursorEntity.getValue());
return Optional.empty();
}
Optional<ClosestEntity> optionalClosestEntity = possibleEntities.stream()
.filter(entity -> pagesMatch(entity, manualEntity.getEntityPosition()))
.map(entity -> ClosestEntity.builder().distance(calculateMinDistance(manualEntity.getEntityPosition(), entity)).textEntity(entity).build())
.filter(entity -> pagesMatch(entity, precursorEntity.getEntityPosition()))
.map(entity -> ClosestEntity.builder().distance(calculateMinDistance(precursorEntity.getEntityPosition(), entity)).textEntity(entity).build())
.min(Comparator.comparingDouble(ClosestEntity::getDistance));
if (optionalClosestEntity.isEmpty()) {
log.warn("No Entity with value {} found on page {}", manualEntity.getValue(), manualEntity.getEntityPosition());
log.warn("No Entity with value {} found on page {}", precursorEntity.getValue(), precursorEntity.getEntityPosition());
return Optional.empty();
}
ClosestEntity closestEntity = optionalClosestEntity.get();
if (closestEntity.getDistance() > matchThreshold) {
log.warn("For entity {} on page {} with positions {} distance to closest found entity is {} and therefore higher than the threshold of {}",
manualEntity.getValue(),
manualEntity.getEntityPosition().get(0).pageNumber(),
manualEntity.getEntityPosition().stream().map(RectangleWithPage::rectangle2D).toList(),
precursorEntity.getValue(),
precursorEntity.getEntityPosition().get(0).pageNumber(),
precursorEntity.getEntityPosition().stream().map(RectangleWithPage::rectangle2D).toList(),
closestEntity.getDistance(),
matchThreshold);
return Optional.empty();
@@ -150,10 +150,10 @@ public class EntityFindingUtility {
}
public Map<String, List<TextEntity>> findAllPossibleEntitiesAndGroupByValue(SemanticNode node, List<ManualEntity> manualEntities) {
public Map<String, List<TextEntity>> findAllPossibleEntitiesAndGroupByValue(SemanticNode node, List<PrecursorEntity> manualEntities) {
Set<Integer> pageNumbers = manualEntities.stream().flatMap(entry -> entry.getEntityPosition().stream().map(RectangleWithPage::pageNumber)).collect(Collectors.toSet());
Set<String> entryValues = manualEntities.stream().map(ManualEntity::getValue).filter(Objects::nonNull).map(String::toLowerCase).collect(Collectors.toSet());
Set<String> entryValues = manualEntities.stream().map(PrecursorEntity::getValue).filter(Objects::nonNull).map(String::toLowerCase).collect(Collectors.toSet());
if (!pageNumbers.stream().allMatch(node::onPage)) {
throw new IllegalArgumentException(format("SemanticNode \"%s\" does not contain these pages %s, it has pages: %s",
@@ -0,0 +1,161 @@
package com.iqser.red.service.redaction.v1.server.service.document;
import java.util.ArrayList;
import java.util.Collection;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Optional;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import lombok.AccessLevel;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
public class EntityFromPrecursorCreationService {
static double MATCH_THRESHOLD = 10; // Is compared to the average sum of distances in pdf coordinates for each corner of the bounding box of the entities
EntityFindingUtility entityFindingUtility;
EntityCreationService entityCreationService;
DictionaryService dictionaryService;
@Autowired
public EntityFromPrecursorCreationService(EntityEnrichmentService entityEnrichmentService, DictionaryService dictionaryService, EntityFindingUtility entityFindingUtility) {
this.entityFindingUtility = entityFindingUtility;
entityCreationService = new EntityCreationService(entityEnrichmentService);
this.dictionaryService = dictionaryService;
}
public List<PrecursorEntity> createEntitiesIfFoundAndReturnNotFoundEntries(ManualRedactions manualRedactions, SemanticNode node, String dossierTemplateId) {
Set<IdRemoval> idRemovals = manualRedactions.getIdsToRemove();
List<PrecursorEntity> manualEntities = manualRedactions.getEntriesToAdd()
.stream()
.filter(BaseAnnotation::isLocal)
.filter(manualRedactionEntry -> idRemovals.stream()
.filter(idRemoval -> idRemoval.getAnnotationId().equals(manualRedactionEntry.getAnnotationId()))
.filter(idRemoval -> idRemoval.getRequestDate().isBefore(manualRedactionEntry.getRequestDate()))
.findAny()//
.isEmpty())
.map(manualRedactionEntry -> //
PrecursorEntity.fromManualRedactionEntry(manualRedactionEntry, dictionaryService.isHint(manualRedactionEntry.getType(), dossierTemplateId)))
.peek(manualEntity -> {
if (manualEntity.getEntityType().equals(EntityType.HINT)) {
manualEntity.skip("MAN.5.1", "manual hint is skipped by default");
} else {
manualEntity.apply("MAN.5.0", "manual entries are applied by default", manualEntity.getLegalBasis());
}
})
.toList();
return toTextEntity(manualEntities, node);
}
public List<PrecursorEntity> createEntitiesIfFoundAndReturnNotFoundEntries(ImportedRedactions importedRedactions, SemanticNode node) {
List<PrecursorEntity> importedEntities = importedRedactions.getImportedRedactions()
.stream()
.map(PrecursorEntity::fromImportedEntry)
.peek(importedEntity -> importedEntity.apply("IMP.0.0", importedEntity.getReason(), importedEntity.getLegalBasis()))
.toList();
//we could add image handling here as well and create not only text entities
return toTextEntity(importedEntities, node);
}
public List<PrecursorEntity> toTextEntity(List<PrecursorEntity> precursorEntities, SemanticNode node) {
var notFoundEntities = precursorEntities.stream()
.filter(PrecursorEntity::isRectangle)
.collect(Collectors.toList());
var findableEntities = precursorEntities.stream()
.filter(precursorEntity -> !precursorEntity.isRectangle())
.toList();
Map<String, List<TextEntity>> tempEntitiesByValue = entityFindingUtility.findAllPossibleEntitiesAndGroupByValue(node, findableEntities);
for (PrecursorEntity precursorEntity : findableEntities) {
Optional<TextEntity> optionalClosestEntity = entityFindingUtility.findClosestEntityAndReturnEmptyIfNotFound(precursorEntity, tempEntitiesByValue, MATCH_THRESHOLD);
if (optionalClosestEntity.isEmpty()) {
notFoundEntities.add(precursorEntity);
continue;
}
createCorrectEntity(precursorEntity, optionalClosestEntity.get());
}
tempEntitiesByValue.values()
.stream()
.flatMap(Collection::stream)
.forEach(TextEntity::removeFromGraph);
return notFoundEntities;
}
/**
* Deletes the temp Entity and creates a RedactionEntity with correct values, based on the given parameters.
*
* @param precursorEntity The entity identifier for the RedactionEntity.
* @param closestEntity The closest Boundary to the RedactionEntity.
*/
public static TextEntity createCorrectEntity(PrecursorEntity precursorEntity, TextEntity closestEntity) {
return createCorrectEntity(precursorEntity, closestEntity, false);
}
public static TextEntity createCorrectEntity(PrecursorEntity precursorEntity, TextEntity closestEntity, boolean generateId) {
TextEntity correctEntity;
if (generateId) {
correctEntity = TextEntity.initialEntityNode(closestEntity.getTextRange(),
precursorEntity.type(),
precursorEntity.getEntityType(),
closestEntity.getDeepestFullyContainingNode());
} else {
correctEntity = TextEntity.initialEntityNode(closestEntity.getTextRange(), precursorEntity.type(), precursorEntity.getEntityType(), precursorEntity.getId());
}
correctEntity.setDeepestFullyContainingNode(closestEntity.getDeepestFullyContainingNode());
correctEntity.setIntersectingNodes(new ArrayList<>(closestEntity.getIntersectingNodes()));
correctEntity.setDuplicateTextRanges(new ArrayList<>(closestEntity.getDuplicateTextRanges()));
correctEntity.setPages(new HashSet<>(closestEntity.getPages()));
correctEntity.setValue(closestEntity.getValue());
correctEntity.setTextAfter(closestEntity.getTextAfter());
correctEntity.setTextBefore(closestEntity.getTextBefore());
correctEntity.getIntersectingNodes()
.forEach(n -> n.getEntities().add(correctEntity));
correctEntity.getPages()
.forEach(page -> page.getEntities().add(correctEntity));
correctEntity.addMatchedRules(precursorEntity.getMatchedRuleList());
correctEntity.setDictionaryEntry(precursorEntity.isDictionaryEntry());
correctEntity.setDossierDictionaryEntry(precursorEntity.isDossierDictionaryEntry());
correctEntity.getManualOverwrite().addChanges(precursorEntity.getManualOverwrite().getManualChangeLog());
correctEntity.addEngines(precursorEntity.getEngines());
return correctEntity;
}
}
@@ -0,0 +1,60 @@
package com.iqser.red.service.redaction.v1.server.service.document;
import java.util.Collection;
import java.util.Collections;
import java.util.List;
import java.util.stream.Stream;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import io.micrometer.observation.annotation.Observed;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@RequiredArgsConstructor
public class ImportedRedactionEntryService {
private final EntityFromPrecursorCreationService entityFromPrecursorCreationService;
@Observed(name = "ImportedRedactionEntryService", contextualName = "add-imported-redaction-entries")
public List<PrecursorEntity> addImportedEntriesAndReturnNotFoundEntries(AnalyzeRequest analyzeRequest, ImportedRedactions importedRedactions, Document document) {
List<PrecursorEntity> notFoundImportedEntries = Collections.emptyList();
if (!importedRedactions.getImportedRedactions().isEmpty()) {
notFoundImportedEntries = entityFromPrecursorCreationService.createEntitiesIfFoundAndReturnNotFoundEntries(importedRedactions, document);
log.info("Added Imported entries for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
}
if (notFoundImportedEntries.isEmpty()) {
return Collections.emptyList();
}
List<BaseAnnotation> manualChanges = allManualChangesExceptAdd(analyzeRequest.getManualRedactions());
for (PrecursorEntity notFoundManualRedactionEntry : notFoundImportedEntries) {
manualChanges.stream()
.filter(change -> change.getAnnotationId().equals(notFoundManualRedactionEntry.getId()))
.forEach(change -> notFoundManualRedactionEntry.getManualOverwrite().addChange(change));
}
return notFoundImportedEntries;
}
private List<BaseAnnotation> allManualChangesExceptAdd(ManualRedactions manualRedactions) {
return Stream.of(manualRedactions.getForceRedactions(),
manualRedactions.getResizeRedactions(),
manualRedactions.getRecategorizations(),
manualRedactions.getIdsToRemove(),
manualRedactions.getLegalBasisChanges()).flatMap(Collection::stream).map(baseAnnotation -> (BaseAnnotation) baseAnnotation).toList();
}
}
@@ -1,126 +0,0 @@
package com.iqser.red.service.redaction.v1.server.service.document;
import java.util.ArrayList;
import java.util.Collection;
import java.util.HashSet;
import java.util.LinkedList;
import java.util.List;
import java.util.Map;
import java.util.Optional;
import java.util.Set;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import lombok.AccessLevel;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
public class ManualEntityCreationService {
static double MATCH_THRESHOLD = 10; // Is compared to the average sum of distances in pdf coordinates for each corner of the bounding box of the entities
EntityFindingUtility entityFindingUtility;
EntityCreationService entityCreationService;
DictionaryService dictionaryService;
@Autowired
public ManualEntityCreationService(EntityEnrichmentService entityEnrichmentService, DictionaryService dictionaryService, EntityFindingUtility entityFindingUtility) {
this.entityFindingUtility = entityFindingUtility;
entityCreationService = new EntityCreationService(entityEnrichmentService);
this.dictionaryService = dictionaryService;
}
public List<ManualEntity> createRedactionEntitiesIfFoundAndReturnNotFoundEntries(ManualRedactions manualRedactions, SemanticNode node, String dossierTemplateId) {
Set<IdRemoval> idRemovals = manualRedactions.getIdsToRemove();
List<ManualEntity> manualEntities = manualRedactions.getEntriesToAdd()
.stream()
.filter(manualRedactionEntry -> !(idRemovals.stream()
.map(BaseAnnotation::getAnnotationId)
.toList()
.contains(manualRedactionEntry.getAnnotationId()) && manualRedactionEntry.getRequestDate()
.isBefore(idRemovals.stream()
.filter(idRemoval -> idRemoval.getAnnotationId().equals(manualRedactionEntry.getAnnotationId()))
.findFirst()
.get()
.getRequestDate())))
.filter(manualRedactionEntry -> !(manualRedactionEntry.isAddToDictionary() || manualRedactionEntry.isAddToDossierDictionary()))
.map(manualRedactionEntry -> ManualEntity.fromManualRedactionEntry(manualRedactionEntry,
dictionaryService.isHint(manualRedactionEntry.getType(), dossierTemplateId)))
.peek(manualEntity -> {
if (manualEntity.getEntityType().equals(EntityType.HINT)) {
manualEntity.skip("MAN.5.1", "manual hint is skipped by default");
} else {
manualEntity.apply("MAN.5.0", "manual entries are applied by default", manualEntity.getLegalBasis());
}
})
.toList();
return toTextEntity(manualEntities, node);
}
public List<ManualEntity> toTextEntity(List<ManualEntity> manualEntities, SemanticNode node) {
Map<String, List<TextEntity>> tempEntitiesByValue = entityFindingUtility.findAllPossibleEntitiesAndGroupByValue(node, manualEntities);
List<ManualEntity> notFoundManualEntities = new LinkedList<>();
for (ManualEntity manualEntity : manualEntities) {
Optional<TextEntity> optionalClosestEntity = entityFindingUtility.findClosestEntityAndReturnEmptyIfNotFound(manualEntity, tempEntitiesByValue, MATCH_THRESHOLD);
if (optionalClosestEntity.isEmpty()) {
notFoundManualEntities.add(manualEntity);
continue;
}
createCorrectEntity(manualEntity, optionalClosestEntity.get());
}
tempEntitiesByValue.values().stream().flatMap(Collection::stream).forEach(TextEntity::removeFromGraph);
return notFoundManualEntities;
}
/**
* Deletes the temp Entity and creates a RedactionEntity with correct values, based on the given parameters.
*
* @param manualEntity The entity identifier for the RedactionEntity.
* @param closestEntity The closest Boundary to the RedactionEntity.
*/
private void createCorrectEntity(ManualEntity manualEntity, TextEntity closestEntity) {
TextEntity correctEntity = TextEntity.initialEntityNode(closestEntity.getTextRange(), manualEntity.type(), manualEntity.getEntityType(), manualEntity.getId());
correctEntity.setDeepestFullyContainingNode(closestEntity.getDeepestFullyContainingNode());
correctEntity.setIntersectingNodes(new ArrayList<>(closestEntity.getIntersectingNodes()));
correctEntity.setDuplicateTextRanges(new ArrayList<>(closestEntity.getDuplicateTextRanges()));
correctEntity.setPages(new HashSet<>(closestEntity.getPages()));
correctEntity.setValue(closestEntity.getValue());
correctEntity.setTextAfter(closestEntity.getTextAfter());
correctEntity.setTextBefore(closestEntity.getTextBefore());
correctEntity.getIntersectingNodes().forEach(n -> n.getEntities().add(correctEntity));
correctEntity.getPages().forEach(page -> page.getEntities().add(correctEntity));
correctEntity.addMatchedRules(manualEntity.getMatchedRuleList());
correctEntity.setDictionaryEntry(manualEntity.isDictionaryEntry());
correctEntity.setDossierDictionaryEntry(manualEntity.isDossierDictionaryEntry());
correctEntity.getManualOverwrite().addChanges(manualEntity.getManualOverwrite().getManualChangeLog());
}
}
@@ -10,8 +10,8 @@ import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import io.micrometer.observation.annotation.Observed;
import lombok.RequiredArgsConstructor;
@@ -22,23 +22,24 @@ import lombok.extern.slf4j.Slf4j;
@RequiredArgsConstructor
public class ManualRedactionEntryService {
private final ManualEntityCreationService manualEntityCreationService;
private final EntityFromPrecursorCreationService entityFromPrecursorCreationService;
@Observed(name = "ManualRedactionEntryService", contextualName = "add-manual-redaction-entries")
public List<ManualEntity> addManualRedactionEntriesAndReturnNotFoundEntries(AnalyzeRequest analyzeRequest, Document document, String dossierTemplateId) {
public List<PrecursorEntity> addManualRedactionEntriesAndReturnNotFoundEntries(AnalyzeRequest analyzeRequest, Document document, String dossierTemplateId) {
List<ManualEntity> notFoundManualRedactionEntries = Collections.emptyList();
List<PrecursorEntity> notFoundManualRedactionEntries = Collections.emptyList();
if (analyzeRequest.getManualRedactions() != null) {
notFoundManualRedactionEntries = manualEntityCreationService.createRedactionEntitiesIfFoundAndReturnNotFoundEntries(analyzeRequest.getManualRedactions(),
notFoundManualRedactionEntries = entityFromPrecursorCreationService.createEntitiesIfFoundAndReturnNotFoundEntries(analyzeRequest.getManualRedactions(),
document, dossierTemplateId);
log.info("Added Manual redaction entries for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
}
if (notFoundManualRedactionEntries.isEmpty()) {
return Collections.emptyList();
}
List<BaseAnnotation> manualChanges = allManualChangesExceptAdd(analyzeRequest.getManualRedactions());
for (ManualEntity notFoundManualRedactionEntry : notFoundManualRedactionEntries) {
for (PrecursorEntity notFoundManualRedactionEntry : notFoundManualRedactionEntries) {
manualChanges.stream()
.filter(change -> change.getAnnotationId().equals(notFoundManualRedactionEntry.getId()))
.forEach(change -> notFoundManualRedactionEntry.getManualOverwrite().addChange(change));
@@ -13,6 +13,9 @@ import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
@@ -40,7 +43,11 @@ import lombok.extern.slf4j.Slf4j;
public class SectionFinderService {
@Timed("redactmanager_findSectionsToReanalyse")
public Set<Integer> findSectionsToReanalyse(DictionaryIncrement dictionaryIncrement, EntityLog entityLog, Document document, AnalyzeRequest analyzeRequest) {
public Set<Integer> findSectionsToReanalyse(DictionaryIncrement dictionaryIncrement,
EntityLog entityLog,
Document document,
AnalyzeRequest analyzeRequest,
ImportedRedactions importedRedactions) {
long start = System.currentTimeMillis();
Set<String> relevantManuallyModifiedAnnotationIds = getRelevantManuallyModifiedAnnotationIds(analyzeRequest.getManualRedactions());
@@ -50,20 +57,26 @@ public class SectionFinderService {
if (entry.getContainingNodeId().isEmpty()) {
continue; // Empty list means either Entity has not been found or it is between main sections. Thus, this might lead to wrong reanalysis.
}
sectionsToReanalyse.add(entry.getContainingNodeId().get(0));
sectionsToReanalyse.add(entry.getContainingNodeId()
.get(0));
}
}
var dictionaryIncrementsSearch = new SearchImplementation(dictionaryIncrement.getValues().stream().map(DictionaryIncrementValue::getValue).collect(Collectors.toList()),
true);
var dictionaryIncrementsSearch = new SearchImplementation(dictionaryIncrement.getValues()
.stream()
.map(DictionaryIncrementValue::getValue)
.toList(), true);
document.streamChildren().forEach(mainNode -> {
if (dictionaryIncrementsSearch.atLeastOneMatches(mainNode.getTextBlock().getSearchText())) {
sectionsToReanalyse.add(mainNode.getTreeId().get(0));
}
});
document.streamChildren()
.forEach(mainNode -> {
if (dictionaryIncrementsSearch.atLeastOneMatches(mainNode.getTextBlock().getSearchText())) {
sectionsToReanalyse.add(mainNode.getTreeId()
.get(0));
}
});
Set<Integer> relevantPagesForReanalysis = getRelevantPageNumbersForAddRedactions(analyzeRequest);
relevantPagesForReanalysis.addAll(getRelevantPageNumbersForImportedRedactions(importedRedactions, relevantManuallyModifiedAnnotationIds));
if (!relevantPagesForReanalysis.isEmpty()) {
sectionsToReanalyse.addAll(getSectionNumbersOnPages(document, relevantPagesForReanalysis));
}
@@ -79,8 +92,11 @@ public class SectionFinderService {
return document.getPages()
.stream()
.filter(page -> relevantPagesForReanalysis.contains(page.getNumber()))
.flatMap(page -> Stream.concat(page.getMainBody().stream().filter(node -> node.getType().equals(NodeType.SECTION)), Stream.of(page.getHeader(), page.getFooter())))
.map(node -> node.getTreeId().get(0))
.flatMap(page -> Stream.concat(page.getMainBody()
.stream()
.filter(node -> node.getType().equals(NodeType.SECTION)), Stream.of(page.getHeader(), page.getFooter())))
.map(node -> node.getTreeId()
.get(0))
.toList();
}
@@ -91,8 +107,7 @@ public class SectionFinderService {
return Collections.emptySet();
}
return analyzeRequest.getManualRedactions()
.getEntriesToAdd()
return analyzeRequest.getManualRedactions().getEntriesToAdd()
.stream()
.filter(addRedaction -> !(addRedaction.isAddToDictionary() || addRedaction.isAddToDossierDictionary()))
.map(ManualRedactionEntry::getPositions)
@@ -102,17 +117,44 @@ public class SectionFinderService {
}
private static Set<Integer> getRelevantPageNumbersForImportedRedactions(ImportedRedactions importedRedactions, Set<String> idsWithUnprocessedManualChanges) {
if (importedRedactions == null || importedRedactions.getImportedRedactions() == null) {
return Collections.emptySet();
}
return importedRedactions.getImportedRedactions()
.stream()
.filter(importedRedaction -> idsWithUnprocessedManualChanges.contains(importedRedaction.getId()))
.map(ImportedRedaction::getPositions)
.flatMap(Collection::stream)
.map(Position::getPageNumber)
.collect(Collectors.toSet());
}
private static Set<String> getRelevantManuallyModifiedAnnotationIds(ManualRedactions manualRedactions) {
if (manualRedactions == null) {
return new HashSet<>();
}
return Stream.concat(manualRedactions.getResizeRedactions().stream().map(ManualResizeRedaction::getAnnotationId),
Stream.concat(manualRedactions.getLegalBasisChanges().stream().map(ManualLegalBasisChange::getAnnotationId),
Stream.concat(manualRedactions.getRecategorizations().stream().map(ManualRecategorization::getAnnotationId),
Stream.concat(manualRedactions.getIdsToRemove().stream().map(IdRemoval::getAnnotationId),
manualRedactions.getForceRedactions().stream().map(ManualForceRedaction::getAnnotationId))))).collect(Collectors.toSet());
return Stream.concat(manualRedactions.getResizeRedactions()
.stream()
.map(ManualResizeRedaction::getAnnotationId),
Stream.concat(manualRedactions.getLegalBasisChanges()
.stream()
.map(ManualLegalBasisChange::getAnnotationId),
Stream.concat(manualRedactions.getRecategorizations()
.stream()
.map(ManualRecategorization::getAnnotationId),
Stream.concat(manualRedactions.getIdsToRemove()
.stream()
.map(IdRemoval::getAnnotationId),
manualRedactions.getForceRedactions()
.stream()
.map(ManualForceRedaction::getAnnotationId)))))
.collect(Collectors.toSet());
}
}
@@ -1,6 +1,9 @@
package com.iqser.red.service.redaction.v1.server.service.drools;
import java.util.ArrayList;
import java.util.Comparator;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.regex.Pattern;
import java.util.stream.Collectors;
@@ -12,24 +15,34 @@ import org.springframework.stereotype.Service;
import com.google.common.collect.Sets;
import com.iqser.red.service.persistence.service.v1.api.shared.model.RuleFileType;
import com.iqser.red.service.redaction.v1.model.DroolsSyntaxDeprecatedWarnings;
import com.iqser.red.service.redaction.v1.model.DroolsSyntaxErrorMessage;
import com.iqser.red.service.redaction.v1.model.DroolsSyntaxValidation;
import com.iqser.red.service.redaction.v1.model.RuleValidationModel;
import com.iqser.red.service.redaction.v1.server.DeprecatedElementsFinder;
import com.iqser.red.service.redaction.v1.server.model.dictionary.SearchImplementation;
import com.iqser.red.service.redaction.v1.server.model.drools.BasicQuery;
import com.iqser.red.service.redaction.v1.server.model.drools.BasicRule;
import com.iqser.red.service.redaction.v1.server.model.drools.RuleClass;
import com.iqser.red.service.redaction.v1.server.model.drools.RuleFileBluePrint;
import com.iqser.red.service.redaction.v1.server.model.drools.RuleUnit;
import com.iqser.red.service.redaction.v1.server.storage.RuleManagementResources;
import lombok.RequiredArgsConstructor;
import lombok.SneakyThrows;
import lombok.extern.slf4j.Slf4j;
@Service
@RequiredArgsConstructor
@Slf4j
public class DroolsSyntaxValidationService {
private static final Pattern allowedImportsPattern = Pattern.compile("^(?:import\\s+static\\s+)?(?:import\\s+)?(?:com\\.knecon\\.fforesight|com\\.iqser\\.red)\\..*;$");
private final KieContainerCreationService kieContainerCreationService;
private final DeprecatedElementsFinder deprecatedElementsFinder;
@SneakyThrows
public DroolsSyntaxValidation testRules(RuleValidationModel rules) {
@@ -43,15 +56,74 @@ public class DroolsSyntaxValidationService {
}
DroolsSyntaxValidation droolsCompilerSyntaxValidation = buildDroolsCompilerSyntaxValidation(rules);
droolsCompilerSyntaxValidation.getDroolsSyntaxErrorMessages().addAll(customDroolsSyntaxValidation.getDroolsSyntaxErrorMessages());
droolsCompilerSyntaxValidation.getDroolsSyntaxDeprecatedWarnings().addAll(customDroolsSyntaxValidation.getDroolsSyntaxDeprecatedWarnings());
return droolsCompilerSyntaxValidation;
}
private DroolsSyntaxDeprecatedWarnings getWarningsForDeprecatedImports(RuleFileBluePrint ruleFileBluePrint) {
if (!deprecatedElementsFinder.getDeprecatedClasses().isEmpty()) {
String imports = ruleFileBluePrint.getImports();
SearchImplementation classesSearchImplementation = deprecatedElementsFinder.getClassesSearchImplementation();
List<SearchImplementation.MatchPosition> matches = classesSearchImplementation.getMatches(imports);
if (!matches.isEmpty()) {
String sb = "Following imports are deprecated: \n" + matches.stream()
.map(m -> imports.substring(m.startIndex(), m.endIndex()))
.collect(Collectors.joining("\n"));
return DroolsSyntaxDeprecatedWarnings.builder().line(ruleFileBluePrint.getImportLine()).column(0).message(sb)
.build();
}
}
return null;
}
private List<DroolsSyntaxDeprecatedWarnings> getWarningsForDeprecatedRules(RuleFileBluePrint ruleFileBluePrint) {
List<DroolsSyntaxDeprecatedWarnings> warningMessages = new ArrayList<>();
// checks the rules for deprecateMethods
if (!deprecatedElementsFinder.getDeprecatedMethods().isEmpty()) {
SearchImplementation methodsSearchImplementation = deprecatedElementsFinder.getMethodsSearchImplementation();
Map<String, String> deprecatedMethodsSignatureMap = deprecatedElementsFinder.getDeprecatedMethodsSignaturesMap();
for (RuleClass ruleClass : ruleFileBluePrint.getRuleClasses()) {
for (RuleUnit ruleUnit : ruleClass.ruleUnits()) {
for (BasicRule basicRule : ruleUnit.rules()) {
List<SearchImplementation.MatchPosition> matches = methodsSearchImplementation.getMatches(basicRule.getCode());
if (!matches.isEmpty()) {
String warningMessage = matches.stream()
.map(m -> basicRule.getCode().substring(m.startIndex(), m.endIndex()))
.distinct()
.map(dm -> String.format("Method %s might be deprecated because of \n %s \n", dm, deprecatedMethodsSignatureMap.get(dm)))
.collect(Collectors.joining("\n"));
warningMessages.add(DroolsSyntaxDeprecatedWarnings.builder().line(basicRule.getLine()).column(0).message(warningMessage)
.build());
}
}
}
}
}
return warningMessages.stream()
.sorted(Comparator.comparingInt(DroolsSyntaxDeprecatedWarnings::getLine))
.collect(Collectors.toList());
}
private DroolsSyntaxValidation buildCustomDroolsSyntaxValidation(String ruleString, RuleFileType ruleFileType) throws DroolsParserException {
RuleFileBluePrint ruleFileBluePrint = RuleFileParser.buildBluePrintFromRulesString(ruleString);
DroolsSyntaxValidation customSyntaxValidation = ruleFileBluePrint.getDroolsSyntaxValidation();
// find deprecated elements in the ruleFileBluePrint
DroolsSyntaxDeprecatedWarnings warningMessageForImports = getWarningsForDeprecatedImports(ruleFileBluePrint);
if (warningMessageForImports != null) {
customSyntaxValidation.getDroolsSyntaxDeprecatedWarnings().add(warningMessageForImports);
}
customSyntaxValidation.getDroolsSyntaxDeprecatedWarnings().addAll(getWarningsForDeprecatedRules(ruleFileBluePrint));
RuleFileBluePrint baseRuleFileBluePrint = switch (ruleFileType) {
case ENTITY -> RuleFileParser.buildBluePrintFromRulesString(RuleManagementResources.getBaseRuleFileString());
case COMPONENT -> RuleFileParser.buildBluePrintFromRulesString(RuleManagementResources.getBaseComponentRuleFileString());
@@ -60,35 +132,36 @@ public class DroolsSyntaxValidationService {
if (!importsAreValid(baseRuleFileBluePrint, ruleFileBluePrint)) {
customSyntaxValidation.getDroolsSyntaxErrorMessages()
.add(DroolsSyntaxErrorMessage.builder()
.line(ruleFileBluePrint.getImportLine())
.column(0)
.message(String.format("Changing the imports is not allowed! Must be: %n%s", baseRuleFileBluePrint.getImports()))
.build());
.line(ruleFileBluePrint.getImportLine())
.column(0)
.message(String.format("Changing the imports is not allowed! Must be: %n%s", baseRuleFileBluePrint.getImports()))
.build());
}
if (!ruleFileBluePrint.getGlobals().equals(baseRuleFileBluePrint.getGlobals())) {
customSyntaxValidation.getDroolsSyntaxErrorMessages()
.add(DroolsSyntaxErrorMessage.builder()
.line(ruleFileBluePrint.getGlobalsLine())
.column(0)
.message(String.format("Changing the globals is not allowed! Must be: %n%s", baseRuleFileBluePrint.getGlobals()))
.build());
.line(ruleFileBluePrint.getGlobalsLine())
.column(0)
.message(String.format("Changing the globals is not allowed! Must be: %n%s", baseRuleFileBluePrint.getGlobals()))
.build());
}
baseRuleFileBluePrint.getQueries().forEach(basicQuery -> {
if (!validateQueryIsPresent(basicQuery, ruleFileBluePrint)) {
customSyntaxValidation.getDroolsSyntaxErrorMessages()
.add(DroolsSyntaxErrorMessage.builder()
.line(basicQuery.getLine())
.column(0)
.message(String.format("Changing or removing the query %s is not allowed! Must be: %n%s", basicQuery.getName(), basicQuery.getCode()))
.build());
}
});
baseRuleFileBluePrint.getQueries()
.forEach(basicQuery -> {
if (!validateQueryIsPresent(basicQuery, ruleFileBluePrint)) {
customSyntaxValidation.getDroolsSyntaxErrorMessages()
.add(DroolsSyntaxErrorMessage.builder()
.line(basicQuery.getLine())
.column(0)
.message(String.format("Changing or removing the query %s is not allowed! Must be: %n%s", basicQuery.getName(), basicQuery.getCode()))
.build());
}
});
if (ruleFileType.equals(RuleFileType.ENTITY)) {
String requiredAgendaGroup = "LOCAL_DICTIONARY_ADDS";
if (!validateAgendaGroupIsPresent(ruleFileBluePrint, requiredAgendaGroup)) {
customSyntaxValidation.getDroolsSyntaxErrorMessages().add(DroolsSyntaxErrorMessage.builder().line(0)
.column(0).message(String.format("At least one rule with Agenda-Group '%s' required!", requiredAgendaGroup))
.build());
customSyntaxValidation.getDroolsSyntaxErrorMessages()
.add(DroolsSyntaxErrorMessage.builder().line(0).column(0).message(String.format("At least one rule with Agenda-Group '%s' required!", requiredAgendaGroup))
.build());
}
}
return customSyntaxValidation;
@@ -97,7 +170,8 @@ public class DroolsSyntaxValidationService {
private boolean validateAgendaGroupIsPresent(RuleFileBluePrint ruleFileBluePrint, String agendaGroupName) {
return ruleFileBluePrint.streamAllRules().anyMatch(basicRule -> basicRule.getAgendaGroup().equals(agendaGroupName));
return ruleFileBluePrint.streamAllRules()
.anyMatch(basicRule -> basicRule.getAgendaGroup().equals(agendaGroupName));
}
@@ -109,13 +183,16 @@ public class DroolsSyntaxValidationService {
Set<String> additionalImports = Sets.difference(imports, baseImports);
return additionalImports.stream().allMatch(additionalImport -> allowedImportsPattern.matcher(additionalImport).matches());
return additionalImports.stream()
.allMatch(additionalImport -> allowedImportsPattern.matcher(additionalImport).matches());
}
private static boolean validateQueryIsPresent(BasicQuery queryToCheckFor, RuleFileBluePrint ruleFileBluePrint) {
return ruleFileBluePrint.getQueries().stream().anyMatch(query -> query.getName().equals(queryToCheckFor.getName()) && query.getCode().equals(queryToCheckFor.getCode()));
return ruleFileBluePrint.getQueries()
.stream()
.anyMatch(query -> query.getName().equals(queryToCheckFor.getName()) && query.getCode().equals(queryToCheckFor.getCode()));
}
@@ -124,9 +201,9 @@ public class DroolsSyntaxValidationService {
var versionId = System.currentTimeMillis();
var testRules = "test-rules";
KieBuilder kieBuilder = kieContainerCreationService.registerNewKieContainerVersion(testRules,
versionId,
rules.getRulesString(),
RuleFileType.valueOf(rules.getRuleFileType()));
versionId,
rules.getRulesString(),
RuleFileType.valueOf(rules.getRuleFileType()));
return buildDroolsCompilerSyntaxValidation(kieBuilder);
}
@@ -134,14 +211,18 @@ public class DroolsSyntaxValidationService {
private DroolsSyntaxValidation buildDroolsCompilerSyntaxValidation(KieBuilder kieBuilder) {
List<Message> errorMessages = kieBuilder.getResults().getMessages(Message.Level.ERROR);
List<DroolsSyntaxErrorMessage> droolsSyntaxErrorMessages = errorMessages.stream().map(this::buildDroolsSyntaxErrorMessage).collect(Collectors.toList());
return DroolsSyntaxValidation.builder().droolsSyntaxErrorMessages(droolsSyntaxErrorMessages).build();
List<DroolsSyntaxErrorMessage> droolsSyntaxErrorMessages = errorMessages.stream()
.map(this::buildDroolsSyntaxErrorMessage)
.collect(Collectors.toList());
return DroolsSyntaxValidation.builder().droolsSyntaxErrorMessages(droolsSyntaxErrorMessages)
.build();
}
private DroolsSyntaxErrorMessage buildDroolsSyntaxErrorMessage(Message message) {
return DroolsSyntaxErrorMessage.builder().line(message.getLine()).column(message.getColumn()).message(message.getText()).build();
return DroolsSyntaxErrorMessage.builder().line(message.getLine()).column(message.getColumn()).message(message.getText())
.build();
}
}
@@ -16,6 +16,7 @@ import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.FileAttribute;
import com.iqser.red.service.persistence.service.v1.api.shared.model.RuleFileType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.redaction.v1.server.RedactionServiceSettings;
import com.iqser.red.service.redaction.v1.server.model.NerEntities;
import com.iqser.red.service.redaction.v1.server.model.dictionary.Dictionary;
@@ -55,7 +56,14 @@ public class EntityDroolsExecutionService {
ManualRedactions manualRedactions,
NerEntities nerEntities) {
return executeRules(kieContainer, document, document.streamChildren().toList(), dictionary, fileAttributes, manualRedactions, nerEntities);
return executeRules(kieContainer,
document,
document.streamChildren()
.toList(),
dictionary,
fileAttributes,
manualRedactions,
nerEntities);
}
@@ -80,19 +88,28 @@ public class EntityDroolsExecutionService {
kieSession.setGlobal("dictionary", dictionary);
kieSession.insert(document);
document.getEntities().forEach(kieSession::insert);
document.getEntities()
.forEach(kieSession::insert);
sectionsToAnalyze.forEach(kieSession::insert);
sectionsToAnalyze.stream().flatMap(SemanticNode::streamAllSubNodes).forEach(kieSession::insert);
document.getPages().forEach(kieSession::insert);
fileAttributes.stream().filter(f -> f.getValue() != null).forEach(kieSession::insert);
sectionsToAnalyze.stream()
.flatMap(SemanticNode::streamAllSubNodes)
.forEach(kieSession::insert);
document.getPages()
.forEach(kieSession::insert);
fileAttributes.stream()
.filter(f -> f.getValue() != null)
.forEach(kieSession::insert);
if (manualRedactions != null) {
manualRedactions.getResizeRedactions().forEach(kieSession::insert);
manualRedactions.getRecategorizations().forEach(kieSession::insert);
manualRedactions.getEntriesToAdd().forEach(kieSession::insert);
manualRedactions.getForceRedactions().forEach(kieSession::insert);
manualRedactions.getIdsToRemove().forEach(kieSession::insert);
manualRedactions.getLegalBasisChanges().forEach(kieSession::insert);
manualRedactions.buildAll()
.stream()
.filter(BaseAnnotation::isLocal)
.forEach(kieSession::insert);
}
kieSession.insert(nerEntities);
@@ -105,7 +122,8 @@ public class EntityDroolsExecutionService {
});
try {
completableFuture.orTimeout(settings.getDroolsExecutionTimeoutSecs(), TimeUnit.SECONDS).get();
completableFuture.orTimeout(settings.getDroolsExecutionTimeoutSecs(), TimeUnit.SECONDS)
.get();
} catch (ExecutionException e) {
kieSession.dispose();
if (e.getCause() instanceof TimeoutException) {
@@ -3,6 +3,7 @@ package com.iqser.red.service.redaction.v1.server.storage;
import java.io.File;
import java.io.FileInputStream;
import java.io.InputStream;
import java.util.List;
import java.util.stream.Collectors;
import org.springframework.cache.annotation.Cacheable;
@@ -11,6 +12,7 @@ import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.componentlog.ComponentLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactionsPerPage;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.dossier.file.FileType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
import com.iqser.red.service.redaction.v1.server.client.model.NerEntitiesModel;
@@ -76,10 +78,26 @@ public class RedactionStorageService {
@Timed("redactmanager_getImportedRedactions")
public ImportedRedactions getImportedRedactions(String dossierId, String fileId) {
try {
ImportedRedactionsPerPage importedRedactionsPerPage = storageService.readJSONObject(TenantContext.getTenantId(),
StorageIdUtils.getStorageId(dossierId, fileId, FileType.IMPORTED_REDACTIONS),
ImportedRedactionsPerPage.class);
return new ImportedRedactions(importedRedactionsPerPage.getImportedRedactions().values().stream().flatMap(List::stream).collect(Collectors.toList()));
} catch (StorageObjectDoesNotExist e) {
log.debug("Imported redactions not available.");
return new ImportedRedactions();
}
}
@Timed("redactmanager_getImportedRedactions")
public ImportedRedactionsPerPage getImportedRedactionsPerPage(String dossierId, String fileId) {
try {
return storageService.readJSONObject(TenantContext.getTenantId(),
StorageIdUtils.getStorageId(dossierId, fileId, FileType.IMPORTED_REDACTIONS),
ImportedRedactions.class);
ImportedRedactionsPerPage.class);
} catch (StorageObjectDoesNotExist e) {
log.debug("Imported redactions not available.");
return null;
@@ -1,5 +1,6 @@
package com.iqser.red.service.redaction.v1.server.utils;
import java.util.Collections;
import java.util.LinkedList;
import java.util.Set;
import java.util.function.BiConsumer;
@@ -17,7 +18,7 @@ public class MigratedIdsCollector implements Collector<MigrationEntity, Migrated
@Override
public Supplier<MigratedIds> supplier() {
return () -> new MigratedIds(new LinkedList<>());
return () -> new MigratedIds(new LinkedList<>(), Collections.emptyList());
}
@@ -4,9 +4,11 @@ import static org.junit.jupiter.api.Assertions.assertEquals;
import static org.junit.jupiter.api.Assertions.assertTrue;
import static org.mockito.Mockito.when;
import java.awt.geom.Rectangle2D;
import java.io.File;
import java.io.FileInputStream;
import java.io.FileOutputStream;
import java.io.IOException;
import java.nio.file.Path;
import java.util.Collections;
import java.util.LinkedList;
@@ -29,6 +31,7 @@ import org.springframework.test.context.junit.jupiter.SpringExtension;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.migration.MigratedIds;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
@@ -46,6 +49,7 @@ import com.iqser.red.service.redaction.v1.server.model.MigratedEntityLog;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.redaction.utils.OsUtils;
import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityFindingUtility;
import com.knecon.fforesight.tenantcommons.TenantContext;
import lombok.SneakyThrows;
@@ -83,15 +87,15 @@ public class MigrationIntegrationTest extends BuildDocumentIntegrationTest {
when(dictionaryClient.getVersion(TEST_DOSSIER_TEMPLATE_ID)).thenReturn(0L);
when(dictionaryClient.getAllTypesForDossier(TEST_DOSSIER_ID, true)).thenReturn(List.of(Type.builder()
.id(DOSSIER_REDACTIONS_INDICATOR + ":" + TEST_DOSSIER_TEMPLATE_ID)
.type(DOSSIER_REDACTIONS_INDICATOR)
.dossierTemplateId(TEST_DOSSIER_ID)
.hexColor("#ffe187")
.isHint(hintTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.isCaseInsensitive(caseInSensitiveMap.get(DOSSIER_REDACTIONS_INDICATOR))
.isRecommendation(recommendationTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.rank(rankTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.build()));
.id(DOSSIER_REDACTIONS_INDICATOR + ":" + TEST_DOSSIER_TEMPLATE_ID)
.type(DOSSIER_REDACTIONS_INDICATOR)
.dossierTemplateId(TEST_DOSSIER_ID)
.hexColor("#ffe187")
.isHint(hintTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.isCaseInsensitive(caseInSensitiveMap.get(DOSSIER_REDACTIONS_INDICATOR))
.isRecommendation(recommendationTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.rank(rankTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.build()));
mockDictionaryCalls(null);
@@ -103,7 +107,7 @@ public class MigrationIntegrationTest extends BuildDocumentIntegrationTest {
@SneakyThrows
public void testSave() {
MigratedIds ids = new MigratedIds(new LinkedList<>());
MigratedIds ids = new MigratedIds(new LinkedList<>(), null);
ids.addMapping("123", "321");
ids.addMapping("123", "321");
ids.addMapping("123", "321");
@@ -120,12 +124,13 @@ public class MigrationIntegrationTest extends BuildDocumentIntegrationTest {
@SneakyThrows
public void testMigration() {
String filesPrefix = "files/migration/178ee8cd99fe786e03fad50d51a69ad3";
String filesPrefix = "files/migration/test";
String fileName = filesPrefix + ".ORIGIN.pdf";
String imageFileName = filesPrefix + ".IMAGE_INFO.json";
String tableFileName = filesPrefix + ".TABLES.json";
String manualChangesFileName = filesPrefix + ".MANUAL_CHANGES.json";
String migratedIdsFileName = filesPrefix + ".MIGRATED_IDS.json";
Document document = buildGraph(fileName, imageFileName, tableFileName);
RedactionLog redactionLog;
@@ -137,8 +142,8 @@ public class MigrationIntegrationTest extends BuildDocumentIntegrationTest {
redactionLog = mapper.readValue(in, RedactionLog.class);
}
var manualChangesResource = new ClassPathResource(manualChangesFileName);
ManualRedactions manualRedactions;
if (manualChangesResource.exists()) {
ManualRedactions manualRedactions;
try (var in = manualChangesResource.getInputStream()) {
manualRedactions = mapper.readValue(in, ManualRedactions.class);
if (manualRedactions.getEntriesToAdd() == null) {
@@ -160,17 +165,22 @@ public class MigrationIntegrationTest extends BuildDocumentIntegrationTest {
manualRedactions.setResizeRedactions(Collections.emptySet());
}
}
mergedRedactionLog = legacyRedactionLogMergeService.mergeManualChanges(redactionLog, manualRedactions, TEST_DOSSIER_TEMPLATE_ID);
MigratedIds migratedIds = getMigratedIds(migratedIdsFileName);
revertMigration(manualRedactions, migratedIds);
mergedRedactionLog = legacyRedactionLogMergeService.addManualAddEntriesAndRemoveSkippedImported(redactionLog, manualRedactions, TEST_DOSSIER_TEMPLATE_ID);
} else {
manualRedactions = new ManualRedactions();
mergedRedactionLog = redactionLog;
}
MigratedEntityLog migratedEntityLog = redactionLogToEntityLogMigrationService.migrate(mergedRedactionLog, document, TEST_DOSSIER_TEMPLATE_ID);
MigratedEntityLog migratedEntityLog = redactionLogToEntityLogMigrationService.migrate(mergedRedactionLog,
document,
TEST_DOSSIER_TEMPLATE_ID,
manualRedactions,
TEST_FILE_ID);
redactionStorageService.storeObject(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.ENTITY_LOG, migratedEntityLog.getEntityLog());
assertEquals(mergedRedactionLog.getRedactionLogEntry().size(), migratedEntityLog.getEntityLog().getEntityLogEntry().size());
assertEquals(mergedRedactionLog.getRedactionLogEntry().stream().filter(MigrationIntegrationTest::hasManualChanges).count(),
migratedEntityLog.getMigratedIds().getMappings().size());
EntityLog entityLog = migratedEntityLog.getEntityLog();
assertEquals(mergedRedactionLog.getAnalysisNumber(), entityLog.getAnalysisNumber());
assertEquals(mergedRedactionLog.getAnalysisVersion(), entityLog.getAnalysisVersion());
@@ -181,6 +191,8 @@ public class MigrationIntegrationTest extends BuildDocumentIntegrationTest {
assertEquals(mergedRedactionLog.getLegalBasis().size(), entityLog.getLegalBasis().size());
Map<String, String> migratedIds = migratedEntityLog.getMigratedIds().buildOldToNewMapping();
// assertEquals(legacyRedactionLogMergeService.getNumberOfAffectedAnnotations(manualRedactions), migratedIds.size());
migratedIds.forEach((oldId, newId) -> assertEntryIsEqual(oldId, newId, mergedRedactionLog, entityLog, migratedIds));
AnnotateResponse annotateResponse = annotationService.annotate(AnnotateRequest.builder().dossierId(TEST_DOSSIER_ID).fileId(TEST_FILE_ID).build());
@@ -192,6 +204,53 @@ public class MigrationIntegrationTest extends BuildDocumentIntegrationTest {
}
private void revertMigration(ManualRedactions manualRedactions, MigratedIds migratedIds) {
var mapping = migratedIds.buildNewToOldMapping();
manualRedactions.getEntriesToAdd()
.stream()
.filter(e -> mapping.containsKey(e.getAnnotationId()))
.forEach(e -> e.setAnnotationId(mapping.get(e.getAnnotationId())));
manualRedactions.getRecategorizations()
.stream()
.filter(e -> mapping.containsKey(e.getAnnotationId()))
.forEach(e -> e.setAnnotationId(mapping.get(e.getAnnotationId())));
manualRedactions.getResizeRedactions()
.stream()
.filter(e -> mapping.containsKey(e.getAnnotationId()))
.forEach(e -> e.setAnnotationId(mapping.get(e.getAnnotationId())));
manualRedactions.getIdsToRemove()
.stream()
.filter(e -> mapping.containsKey(e.getAnnotationId()))
.forEach(e -> e.setAnnotationId(mapping.get(e.getAnnotationId())));
manualRedactions.getLegalBasisChanges()
.stream()
.filter(e -> mapping.containsKey(e.getAnnotationId()))
.forEach(e -> e.setAnnotationId(mapping.get(e.getAnnotationId())));
manualRedactions.getForceRedactions()
.stream()
.filter(e -> mapping.containsKey(e.getAnnotationId()))
.forEach(e -> e.setAnnotationId(mapping.get(e.getAnnotationId())));
}
private MigratedIds getMigratedIds(String migratedIdsFileName) throws IOException {
var migratedIdsResource = new ClassPathResource(migratedIdsFileName);
if (!migratedIdsResource.exists()) {
return new MigratedIds();
}
try (var in = migratedIdsResource.getInputStream()) {
return mapper.readValue(in, MigratedIds.class);
}
}
private static boolean hasManualChanges(RedactionLogEntry entry) {
return !entry.getManualChanges().isEmpty() || (entry.getComments() != null && !entry.getComments().isEmpty());
@@ -200,54 +259,74 @@ public class MigrationIntegrationTest extends BuildDocumentIntegrationTest {
private void assertEntryIsEqual(String oldId, String newId, RedactionLog redactionLog, EntityLog entityLog, Map<String, String> oldToNewMapping) {
RedactionLogEntry redactionLogEntry = redactionLog.getRedactionLogEntry().stream().filter(entry -> entry.getId().equals(oldId)).findAny().orElseThrow();
EntityLogEntry entityLogEntry = entityLog.getEntityLogEntry().stream().filter(entry -> entry.getId().equals(newId)).findAny().orElseThrow();
RedactionLogEntry redactionLogEntry = redactionLog.getRedactionLogEntry()
.stream()
.filter(entry -> entry.getId().equals(oldId))
.findAny()
.orElseThrow();
EntityLogEntry entityLogEntry = entityLog.getEntityLogEntry()
.stream()
.filter(entry -> entry.getId().equals(newId))
.findAny()
.orElseThrow();
if (!redactionLogEntry.isImage()) {
assertEquals(redactionLogEntry.getValue().toLowerCase(Locale.ENGLISH), entityLogEntry.getValue().toLowerCase(Locale.ENGLISH));
}
if (entityLogEntry.getManualChanges()
.stream()
.noneMatch(mc -> mc.getManualRedactionType().equals(ManualRedactionType.RECATEGORIZE))) {
assertEquals(redactionLogEntry.getType(), entityLogEntry.getType());
}
assertEquals(redactionLogEntry.getChanges().size(), entityLogEntry.getChanges().size());
assertEquals(redactionLogEntry.getManualChanges().size(), entityLogEntry.getManualChanges().size());
assertTrue(redactionLogEntry.getManualChanges().size() <= entityLogEntry.getManualChanges().size());
assertEquals(redactionLogEntry.getPositions().size(), entityLogEntry.getPositions().size());
// assertTrue(positionsAlmostEqual(redactionLogEntry.getPositions(), entityLogEntry.getPositions()));
assertEquals(redactionLogEntry.getColor(), entityLogEntry.getColor());
assertEqualsNullSafe(redactionLogEntry.getLegalBasis(), entityLogEntry.getLegalBasis());
assertEqualsNullSafe(redactionLogEntry.getReason(), entityLogEntry.getReason());
if (entityLogEntry.getManualChanges()
.stream()
.noneMatch(mc -> mc.getManualRedactionType().equals(ManualRedactionType.RESIZE) || mc.getManualRedactionType().equals(ManualRedactionType.RESIZE_IN_DICTIONARY))) {
assertTrue(positionsAlmostEqual(redactionLogEntry.getPositions(), entityLogEntry.getPositions()));
}
if (entityLogEntry.getManualChanges()
.stream()
.noneMatch(mc -> mc.getManualRedactionType().equals(ManualRedactionType.FORCE))) {
assertEqualsNullSafe(redactionLogEntry.getLegalBasis(), entityLogEntry.getLegalBasis());
}
assertReferencesEqual(redactionLogEntry.getReference(), entityLogEntry.getReference(), oldToNewMapping);
assertEquals(redactionLogEntry.isDictionaryEntry(), entityLogEntry.isDictionaryEntry());
assertEquals(redactionLogEntry.isDossierDictionaryEntry(), entityLogEntry.isDossierDictionaryEntry());
if (redactionLogEntry.getEngines() == null) {
assertTrue(entityLogEntry.getEngines().isEmpty());
} else {
assertEquals(redactionLogEntry.getEngines().stream().map(Enum::name).collect(Collectors.toSet()),
entityLogEntry.getEngines().stream().map(Enum::name).collect(Collectors.toSet()));
assertEquals(redactionLogEntry.getEngines()
.stream()
.map(Enum::name)
.collect(Collectors.toSet()),
entityLogEntry.getEngines()
.stream()
.map(Enum::name)
.collect(Collectors.toSet()));
}
}
private boolean positionsAlmostEqual(List<Rectangle> positions1, List<Position> positions2) {
double tolerance = 3;
double tolerance = 10;
double averageDistance = 0;
for (int i = 0; i < positions1.size(); i++) {
Rectangle p1 = positions1.get(0);
Position p2 = positions2.get(0);
if (p1.getPage() != p2.getPageNumber()) {
return false;
}
if (Math.abs(p1.getHeight() - p2.h()) > tolerance) {
return false;
}
if (Math.abs(p1.getWidth() - p2.w()) > tolerance) {
return false;
}
if (Math.abs(p1.getTopLeft().getX() - p2.x()) > tolerance) {
return false;
}
if (Math.abs(p1.getTopLeft().getY() - p2.y()) > tolerance) {
Rectangle r1 = positions1.get(i);
Rectangle2D p1 = new Rectangle2D.Double(r1.getTopLeft().getX(), r1.getTopLeft().getY(), r1.getWidth(), r1.getHeight());
Position p2 = positions2.get(i);
double distance = EntityFindingUtility.calculateDistance(p1, p2.toRectangle2D());
if (r1.getPage() != p2.getPageNumber()) {
return false;
}
averageDistance += distance;
}
return true;
averageDistance /= positions1.size();
return averageDistance <= tolerance;
}
@@ -273,7 +352,9 @@ public class MigrationIntegrationTest extends BuildDocumentIntegrationTest {
return;
}
assertEquals(reference.stream().map(oldToNewMapping::get).collect(Collectors.toSet()), reference1);
assertEquals(reference.stream()
.map(oldToNewMapping::get)
.collect(Collectors.toSet()), reference1);
}
@@ -119,15 +119,15 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
when(dictionaryClient.getVersion(TEST_DOSSIER_TEMPLATE_ID)).thenReturn(0L);
when(dictionaryClient.getAllTypesForDossier(TEST_DOSSIER_ID, true)).thenReturn(List.of(Type.builder()
.id(DOSSIER_REDACTIONS_INDICATOR + ":" + TEST_DOSSIER_TEMPLATE_ID)
.type(DOSSIER_REDACTIONS_INDICATOR)
.dossierTemplateId(TEST_DOSSIER_ID)
.hexColor("#ffe187")
.isHint(hintTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.isCaseInsensitive(caseInSensitiveMap.get(DOSSIER_REDACTIONS_INDICATOR))
.isRecommendation(recommendationTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.rank(rankTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.build()));
.id(DOSSIER_REDACTIONS_INDICATOR + ":" + TEST_DOSSIER_TEMPLATE_ID)
.type(DOSSIER_REDACTIONS_INDICATOR)
.dossierTemplateId(TEST_DOSSIER_ID)
.hexColor("#ffe187")
.isHint(hintTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.isCaseInsensitive(caseInSensitiveMap.get(DOSSIER_REDACTIONS_INDICATOR))
.isRecommendation(recommendationTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.rank(rankTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.build()));
mockDictionaryCalls(null);
@@ -169,9 +169,10 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
entityLog.getEntityLogEntry().forEach(entry -> {
duplicates.computeIfAbsent(entry.getId(), v -> new ArrayList<>()).add(entry);
});
entityLog.getEntityLogEntry()
.forEach(entry -> {
duplicates.computeIfAbsent(entry.getId(), v -> new ArrayList<>()).add(entry);
});
duplicates.forEach((key, value) -> assertThat(value.size()).isEqualTo(1));
@@ -216,12 +217,12 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
ManualRedactions manualRedactions = ManualRedactions.builder()
.resizeRedactions(Set.of(ManualResizeRedaction.builder()
.annotationId("c6be5277f5ee60dc3d83527798b7fe02")
.value("Dr. Alan")
.positions(List.of(new Rectangle(236.8f, 182.90005f, 40.584f, 12.642f, 7)))
.requestDate(OffsetDateTime.now())
.updateDictionary(false)
.build()))
.annotationId("c6be5277f5ee60dc3d83527798b7fe02")
.value("Dr. Alan")
.positions(List.of(new Rectangle(236.8f, 182.90005f, 40.584f, 12.642f, 7)))
.requestDate(OffsetDateTime.now())
.updateDictionary(false)
.build()))
.build();
request.setManualRedactions(manualRedactions);
@@ -256,7 +257,10 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
var redactionLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var values = redactionLog.getEntityLogEntry().stream().map(EntityLogEntry::getValue).collect(Collectors.toList());
var values = redactionLog.getEntityLogEntry()
.stream()
.map(EntityLogEntry::getValue)
.collect(Collectors.toList());
assertThat(values).containsExactlyInAnyOrder("Lastname M.", "Doe", "Doe J.", "M. Mustermann", "Mustermann M.", "F. Lastname");
}
@@ -268,8 +272,8 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
ClassPathResource importedRedactionClasspathResource = new ClassPathResource(
"files/ImportedRedactions/18 Chlorothalonil RAR 08 Volume 3CA B 6a Oct 2017.IMPORTED_REDACTIONS.json");
storageService.storeObject(TenantContext.getTenantId(),
RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.IMPORTED_REDACTIONS),
importedRedactionClasspathResource.getInputStream());
RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.IMPORTED_REDACTIONS),
importedRedactionClasspathResource.getInputStream());
AnalyzeRequest request = uploadFileToStorage("files/ImportedRedactions/18 Chlorothalonil RAR 08 Volume 3CA B 6a Oct 2017.pdf");
System.out.println("Start Full integration test");
@@ -353,10 +357,18 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
var mergedEntityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var cbiAddressBeforeHintRemoval = entityLog.getEntityLogEntry().stream().filter(re -> re.getType().equalsIgnoreCase("CBI_Address")).findAny().get();
var cbiAddressBeforeHintRemoval = entityLog.getEntityLogEntry()
.stream()
.filter(re -> re.getType().equalsIgnoreCase("CBI_Address"))
.findAny()
.get();
assertThat(cbiAddressBeforeHintRemoval.getState().equals(EntryState.APPLIED)).isFalse();
var cbiAddressAfterHintRemoval = mergedEntityLog.getEntityLogEntry().stream().filter(re -> re.getType().equalsIgnoreCase("CBI_Address")).findAny().get();
var cbiAddressAfterHintRemoval = mergedEntityLog.getEntityLogEntry()
.stream()
.filter(re -> re.getType().equalsIgnoreCase("CBI_Address"))
.findAny()
.get();
assertThat(cbiAddressAfterHintRemoval.getState().equals(EntryState.APPLIED)).isTrue();
}
@@ -386,9 +398,10 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
entityLog.getEntityLogEntry().forEach(entry -> {
duplicates.computeIfAbsent(entry.getId(), v -> new ArrayList<>()).add(entry);
});
entityLog.getEntityLogEntry()
.forEach(entry -> {
duplicates.computeIfAbsent(entry.getId(), v -> new ArrayList<>()).add(entry);
});
duplicates.forEach((id, redactionLogEntries) -> assertThat(redactionLogEntries.size()).isEqualTo(1));
@@ -421,11 +434,11 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
AnalyzeRequest request = uploadFileToStorage(fileName);
request.setFileAttributes(List.of(FileAttribute.builder()
.id("fileAttributeId")
.label("Vertebrate Study")
.placeholder("{fileattributes.vertebrateStudy}")
.value("true")
.build()));
.id("fileAttributeId")
.label("Vertebrate Study")
.placeholder("{fileattributes.vertebrateStudy}")
.value("true")
.build()));
analyzeDocumentStructure(LayoutParsingType.REDACT_MANAGER, request);
AnalyzeResult result = analyzeService.analyze(request);
@@ -449,7 +462,10 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
correctFound++;
continue loop;
}
if (Objects.equals(entityLogEntry.getContainingNodeId().get(0), section.getTreeId().get(0))) {
if (Objects.equals(entityLogEntry.getContainingNodeId()
.get(0),
section.getTreeId()
.get(0))) {
String value = section.getTextBlock().subSequence(new TextRange(entityLogEntry.getStartOffset(), entityLogEntry.getEndOffset())).toString();
if (entityLogEntry.getValue().equalsIgnoreCase(value)) {
correctFound++;
@@ -481,12 +497,12 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
ManualRedactions manualRedactions = new ManualRedactions();
manualRedactions.setEntriesToAdd(Set.of(ManualRedactionEntry.builder()
.value("Redact")
.addToDictionary(true)
.addToDossierDictionary(true)
.positions(List.of(new Rectangle(new Point(95.96979999999999f, 515.7984f), 19.866899999999987f, 46.953f, 2)))
.type("dossier_redaction")
.build()));
.value("Redact")
.addToDictionary(true)
.addToDossierDictionary(true)
.positions(List.of(new Rectangle(new Point(95.96979999999999f, 515.7984f), 19.866899999999987f, 46.953f, 2)))
.type("dossier_redaction")
.build()));
request.setManualRedactions(manualRedactions);
@@ -548,7 +564,11 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var changes = entityLog.getEntityLogEntry().stream().filter(entry -> entry.getValue() != null && entry.getValue().equals("report")).findFirst().get().getChanges();
var changes = entityLog.getEntityLogEntry()
.stream()
.filter(entry -> entry.getValue() != null && entry.getValue().equals("report"))
.findFirst()
.get().getChanges();
assertThat(changes.size()).isEqualTo(2);
@@ -568,18 +588,18 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
ClassPathResource responseJson = new ClassPathResource("files/crafted_document.NER_ENTITIES.json");
storageService.storeObject(TenantContext.getTenantId(),
RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.NER_ENTITIES),
responseJson.getInputStream());
RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.NER_ENTITIES),
responseJson.getInputStream());
long start = System.currentTimeMillis();
AnalyzeRequest request = uploadFileToStorage(fileName);
request.setFileAttributes(List.of(FileAttribute.builder()
.id("fileAttributeId")
.label("Vertebrate Study")
.placeholder("{fileattributes.vertebrateStudy}")
.value("true")
.build()));
.id("fileAttributeId")
.label("Vertebrate Study")
.placeholder("{fileattributes.vertebrateStudy}")
.value("true")
.build()));
analyzeDocumentStructure(LayoutParsingType.REDACT_MANAGER, request);
AnalyzeResult result = analyzeService.analyze(request);
@@ -601,7 +621,11 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
.map(redactionLogEntry -> new TextRange(redactionLogEntry.getStartOffset(), redactionLogEntry.getEndOffset()))
.map(boundary -> documentGraph.getTextBlock().subSequence(boundary).toString())
.toList();
List<String> valuesInRedactionLog = entityLog.getEntityLogEntry().stream().filter(e -> !e.getEntryType().equals(EntryType.IMAGE)).map(EntityLogEntry::getValue).toList();
List<String> valuesInRedactionLog = entityLog.getEntityLogEntry()
.stream()
.filter(e -> !e.getEntryType().equals(EntryType.IMAGE))
.map(EntityLogEntry::getValue)
.toList();
assertEquals(valuesInRedactionLog, valuesInDocument);
@@ -628,11 +652,11 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
ManualRedactions manualRedactions = new ManualRedactions();
manualRedactions.setRecategorizations(Set.of(ManualRecategorization.builder()
.annotationId("37eee3e9d589a5cc529bfec38c3ba479")
.fileId("fileId")
.type("signature")
.requestDate(OffsetDateTime.now())
.build()));
.annotationId("37eee3e9d589a5cc529bfec38c3ba479")
.fileId("fileId")
.type("signature")
.requestDate(OffsetDateTime.now())
.build()));
request.setManualRedactions(manualRedactions);
@@ -683,40 +707,40 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
ManualRedactions manualRedactions = new ManualRedactions();
manualRedactions.getIdsToRemove()
.add(IdRemoval.builder()
.annotationId("308dab9015bfafd911568cffe0a7f7de")
.fileId(TEST_FILE_ID)
.requestDate(OffsetDateTime.of(2022, 05, 23, 8, 30, 07, 475479, ZoneOffset.UTC))
.processedDate(OffsetDateTime.of(2022, 05, 23, 8, 30, 07, 483651, ZoneOffset.UTC))
.build());
.annotationId("308dab9015bfafd911568cffe0a7f7de")
.fileId(TEST_FILE_ID)
.requestDate(OffsetDateTime.of(2022, 05, 23, 8, 30, 07, 475479, ZoneOffset.UTC))
.processedDate(OffsetDateTime.of(2022, 05, 23, 8, 30, 07, 483651, ZoneOffset.UTC))
.build());
manualRedactions.getForceRedactions()
.add(ManualForceRedaction.builder()
.annotationId("0b56ea1a87c83f351df177315af94f0d")
.fileId(TEST_FILE_ID)
.legalBasis("Something")
.requestDate(OffsetDateTime.of(2022, 05, 23, 9, 30, 15, 4653, ZoneOffset.UTC))
.processedDate(OffsetDateTime.of(2022, 05, 23, 9, 30, 15, 794, ZoneOffset.UTC))
.build());
.annotationId("0b56ea1a87c83f351df177315af94f0d")
.fileId(TEST_FILE_ID)
.legalBasis("Something")
.requestDate(OffsetDateTime.of(2022, 05, 23, 9, 30, 15, 4653, ZoneOffset.UTC))
.processedDate(OffsetDateTime.of(2022, 05, 23, 9, 30, 15, 794, ZoneOffset.UTC))
.build());
manualRedactions.getIdsToRemove()
.add(IdRemoval.builder()
.annotationId("0b56ea1a87c83f351df177315af94f0d")
.fileId(TEST_FILE_ID)
.requestDate(OffsetDateTime.of(2022, 05, 23, 8, 30, 23, 961721, ZoneOffset.UTC))
.processedDate(OffsetDateTime.of(2022, 05, 23, 8, 30, 23, 96528, ZoneOffset.UTC))
.build());
.annotationId("0b56ea1a87c83f351df177315af94f0d")
.fileId(TEST_FILE_ID)
.requestDate(OffsetDateTime.of(2022, 05, 23, 8, 30, 23, 961721, ZoneOffset.UTC))
.processedDate(OffsetDateTime.of(2022, 05, 23, 8, 30, 23, 96528, ZoneOffset.UTC))
.build());
request.setManualRedactions(manualRedactions);
AnalyzeResult result = analyzeService.analyze(request);
AnnotateResponse annotateResponse = annotationService.annotate(AnnotateRequest.builder()
.manualRedactions(manualRedactions)
.colors(colors)
.types(types)
.dossierId(TEST_DOSSIER_ID)
.fileId(TEST_FILE_ID)
.build());
.manualRedactions(manualRedactions)
.colors(colors)
.types(types)
.dossierId(TEST_DOSSIER_ID)
.fileId(TEST_FILE_ID)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Annotated.pdf")) {
fileOutputStream.write(annotateResponse.getDocument());
@@ -932,12 +956,12 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
AnnotateResponse annotateResponse = annotationService.annotate(AnnotateRequest.builder()
.manualRedactions(manualRedactions)
.colors(colors)
.types(types)
.dossierId(TEST_DOSSIER_ID)
.fileId(TEST_FILE_ID)
.build());
.manualRedactions(manualRedactions)
.colors(colors)
.types(types)
.dossierId(TEST_DOSSIER_ID)
.fileId(TEST_FILE_ID)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Annotated.pdf")) {
fileOutputStream.write(annotateResponse.getDocument());
@@ -960,15 +984,16 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
var redactionLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
redactionLog.getEntityLogEntry().forEach(entry -> {
if (!entry.getEntryType().equals(EntryType.HINT)) {
if (entry.getType().equals("CBI_author")) {
assertThat(entry.getReason()).isEqualTo("Not redacted because it's row does not belong to a vertebrate study");
} else if (entry.getType().equals("CBI_address")) {
assertThat(entry.getReason()).isEqualTo("No vertebrate found");
}
}
});
redactionLog.getEntityLogEntry()
.forEach(entry -> {
if (!entry.getEntryType().equals(EntryType.HINT)) {
if (entry.getType().equals("CBI_author")) {
assertThat(entry.getReason()).isEqualTo("Not redacted because it's row does not belong to a vertebrate study");
} else if (entry.getType().equals("CBI_address")) {
assertThat(entry.getReason()).isEqualTo("No vertebrate found");
}
}
});
}
@@ -1005,18 +1030,18 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
String manualAddId = UUID.randomUUID().toString();
manualRedactions.setIdsToRemove(Set.of(IdRemoval.builder()
.annotationId("5b940b2cb401ed9f5be6fc24f6e77bcf")
.fileId("fileId")
.processedDate(OffsetDateTime.now())
.requestDate(OffsetDateTime.now())
.build()));
.annotationId("5b940b2cb401ed9f5be6fc24f6e77bcf")
.fileId("fileId")
.processedDate(OffsetDateTime.now())
.requestDate(OffsetDateTime.now())
.build()));
manualRedactions.setForceRedactions(Set.of(ManualForceRedaction.builder()
.annotationId("675eba69b0c2917de55462c817adaa05")
.fileId("fileId")
.legalBasis("Something")
.requestDate(OffsetDateTime.now())
.processedDate(OffsetDateTime.now())
.build()));
.annotationId("675eba69b0c2917de55462c817adaa05")
.fileId("fileId")
.legalBasis("Something")
.requestDate(OffsetDateTime.now())
.processedDate(OffsetDateTime.now())
.build()));
ManualRedactionEntry manualRedactionEntry = new ManualRedactionEntry();
manualRedactionEntry.setAnnotationId(manualAddId);
@@ -1027,7 +1052,7 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
manualRedactionEntry.setProcessedDate(OffsetDateTime.now());
manualRedactionEntry.setRequestDate(OffsetDateTime.now());
manualRedactionEntry.setPositions(List.of(Rectangle.builder().topLeftX(375.61096f).topLeftY(241.282f).width(7.648041f).height(43.72262f).page(1).build(),
Rectangle.builder().topLeftX(384.83517f).topLeftY(241.282f).width(7.648041f).height(17.043358f).page(1).build()));
Rectangle.builder().topLeftX(384.83517f).topLeftY(241.282f).width(7.648041f).height(17.043358f).page(1).build()));
// manualRedactions.getEntriesToAdd().add(manualRedactionEntry);
@@ -1038,39 +1063,63 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
manualRedactions.getEntriesToAdd().add(manualRedactionEntry);
manualRedactions.setIdsToRemove(Set.of(IdRemoval.builder()
.annotationId("5b940b2cb401ed9f5be6fc24f6e77bcf")
.fileId("fileId")
.requestDate(OffsetDateTime.now())
.processedDate(OffsetDateTime.now())
.build()));
.annotationId("5b940b2cb401ed9f5be6fc24f6e77bcf")
.fileId("fileId")
.requestDate(OffsetDateTime.now())
.processedDate(OffsetDateTime.now())
.build()));
manualRedactions.setLegalBasisChanges((Set.of(ManualLegalBasisChange.builder()
.annotationId("675eba69b0c2917de55462c817adaa05")
.fileId("fileId")
.legalBasis("Manual Legal Basis Change")
.processedDate(OffsetDateTime.now())
.requestDate(OffsetDateTime.now())
.build())));
.annotationId("675eba69b0c2917de55462c817adaa05")
.fileId("fileId")
.legalBasis("Manual Legal Basis Change")
.processedDate(OffsetDateTime.now())
.requestDate(OffsetDateTime.now())
.build())));
manualRedactions.setResizeRedactions(Set.of(ManualResizeRedaction.builder()
.annotationId("fc287b74be2421156ab2895c7474ccdd")
.fileId("fileId")
.processedDate(OffsetDateTime.now())
.requestDate(OffsetDateTime.now())
.value("Syngenta Crop Protection AG, Basel, Switzerland RCC Ltd., Itingen, Switzerland")
.positions(List.of(Rectangle.builder().topLeftX(289.44595f).topLeftY(327.567f).width(7.648041f).height(82.51475f).page(1).build(),
Rectangle.builder().topLeftX(298.67056f).topLeftY(327.567f).width(7.648041f).height(75.32377f).page(1).build(),
Rectangle.builder().topLeftX(307.89517f).topLeftY(327.567f).width(7.648041f).height(61.670967f).page(1).build(),
Rectangle.builder().topLeftX(316.99985f).topLeftY(327.567f).width(7.648041f).height(38.104286f).page(1).build()))
.updateDictionary(false)
.build()));
.annotationId("fc287b74be2421156ab2895c7474ccdd")
.fileId("fileId")
.processedDate(OffsetDateTime.now())
.requestDate(OffsetDateTime.now())
.value("Syngenta Crop Protection AG, Basel, Switzerland RCC Ltd., Itingen, Switzerland")
.positions(List.of(Rectangle.builder()
.topLeftX(289.44595f)
.topLeftY(327.567f)
.width(7.648041f)
.height(82.51475f)
.page(1)
.build(),
Rectangle.builder()
.topLeftX(298.67056f)
.topLeftY(327.567f)
.width(7.648041f)
.height(75.32377f)
.page(1)
.build(),
Rectangle.builder()
.topLeftX(307.89517f)
.topLeftY(327.567f)
.width(7.648041f)
.height(61.670967f)
.page(1)
.build(),
Rectangle.builder()
.topLeftX(316.99985f)
.topLeftY(327.567f)
.width(7.648041f)
.height(38.104286f)
.page(1)
.build()))
.updateDictionary(false)
.build()));
analyzeService.reanalyze(request);
AnnotateResponse annotateResponse = annotationService.annotate(AnnotateRequest.builder()
.dossierId(TEST_DOSSIER_ID)
.fileId(TEST_FILE_ID)
.dossierTemplateId(TEST_DOSSIER_TEMPLATE_ID)
.manualRedactions(manualRedactions)
.build());
.dossierId(TEST_DOSSIER_ID)
.fileId(TEST_FILE_ID)
.dossierTemplateId(TEST_DOSSIER_TEMPLATE_ID)
.manualRedactions(manualRedactions)
.build());
try (FileOutputStream fileOutputStream = new FileOutputStream(OsUtils.getTemporaryDirectory() + "/Annotated.pdf")) {
fileOutputStream.write(annotateResponse.getDocument());
@@ -1110,8 +1159,8 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
AnalyzeRequest request = uploadFileToStorage("files/ImportedRedactions/RotateTestFile_without_highlights.pdf");
storageService.storeObject(TenantContext.getTenantId(),
RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.IMPORTED_REDACTIONS),
importedRedactions.getInputStream());
RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.IMPORTED_REDACTIONS),
importedRedactions.getInputStream());
analyzeDocumentStructure(LayoutParsingType.REDACT_MANAGER, request);
AnalyzeResult result = analyzeService.analyze(request);
@@ -1124,17 +1173,18 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
fileOutputStream.write(annotateResponse.getDocument());
}
entityLog.getEntityLogEntry().forEach(entry -> {
if (entry.getValue() == null) {
return;
}
if (entry.getValue().equals("David")) {
assertThat(entry.getImportedRedactionIntersections()).hasSize(1);
}
if (entry.getValue().equals("annotation")) {
assertThat(entry.getImportedRedactionIntersections()).isEmpty();
}
});
entityLog.getEntityLogEntry()
.forEach(entry -> {
if (entry.getValue() == null) {
return;
}
if (entry.getValue().equals("David")) {
assertThat(entry.getImportedRedactionIntersections()).hasSize(1);
}
if (entry.getValue().equals("annotation")) {
assertThat(entry.getImportedRedactionIntersections()).isEmpty();
}
});
}
@@ -1163,7 +1213,10 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
}
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var values = entityLog.getEntityLogEntry().stream().map(EntityLogEntry::getValue).collect(Collectors.toList());
var values = entityLog.getEntityLogEntry()
.stream()
.map(EntityLogEntry::getValue)
.collect(Collectors.toList());
assertThat(values).contains("Mrs. Robinson");
assertThat(values).contains("Mr. Bojangles");
@@ -1178,8 +1231,8 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
ClassPathResource imageServiceResponseFileResource = new ClassPathResource("files/new/SYNGENTA_EFSA_sanitisation_GFL_v1 (1).IMAGE_INFO.json");
storageService.storeObject(TenantContext.getTenantId(),
RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.IMAGE_INFO),
imageServiceResponseFileResource.getInputStream());
RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.IMAGE_INFO),
imageServiceResponseFileResource.getInputStream());
System.out.println("Start Full integration test");
analyzeDocumentStructure(LayoutParsingType.REDACT_MANAGER, request);
@@ -1188,23 +1241,26 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
System.out.println("Finished analysis");
request.setManualRedactions(ManualRedactions.builder()
.legalBasisChanges(Set.of(ManualLegalBasisChange.builder()
.annotationId("3029651d0842a625f2d23f8375c23600")
.section("[19, 2]: Paragraph: Contact point: LexCo Contact:")
.value("0049 331 441 551 14")
.requestDate(OffsetDateTime.now())
.fileId(TEST_FILE_ID)
.legalBasis("Article 39(e)(2) of Regulation (EC) No 178/2002")
.build()))
.build());
.legalBasisChanges(Set.of(ManualLegalBasisChange.builder()
.annotationId("3029651d0842a625f2d23f8375c23600")
.section("[19, 2]: Paragraph: Contact point: LexCo Contact:")
.value("0049 331 441 551 14")
.requestDate(OffsetDateTime.now())
.fileId(TEST_FILE_ID)
.legalBasis("Article 39(e)(2) of Regulation (EC) No 178/2002")
.build()))
.build());
analyzeService.reanalyze(request);
System.out.println("Finished reanalysis");
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
entityLog.getEntityLogEntry().stream().filter(entityLogEntry -> entityLogEntry.getType().equals("signature")).forEach(entityLogEntry -> {
assertThat(entityLogEntry.getState() == EntryState.APPLIED).isTrue();
});
entityLog.getEntityLogEntry()
.stream()
.filter(entityLogEntry -> entityLogEntry.getType().equals("signature"))
.forEach(entityLogEntry -> {
assertThat(entityLogEntry.getState() == EntryState.APPLIED).isTrue();
});
}
@@ -1215,8 +1271,8 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
ClassPathResource imageServiceResponseFileResource = new ClassPathResource("files/new/SYNGENTA_EFSA_sanitisation_GFL_v1 (1).IMAGE_INFO.json");
storageService.storeObject(TenantContext.getTenantId(),
RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.IMAGE_INFO),
imageServiceResponseFileResource.getInputStream());
RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.IMAGE_INFO),
imageServiceResponseFileResource.getInputStream());
System.out.println("Start Full integration test");
analyzeDocumentStructure(LayoutParsingType.REDACT_MANAGER, request);
@@ -1225,21 +1281,22 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
System.out.println("Finished analysis");
request.setManualRedactions(ManualRedactions.builder()
.legalBasisChanges(Set.of(ManualLegalBasisChange.builder()
.annotationId("3029651d0842a625f2d23f8375c23600")
.section("[19, 2]: Paragraph: Contact point: LexCo Contact:")
.value("0049 331 441 551 14")
.requestDate(OffsetDateTime.now())
.fileId(TEST_FILE_ID)
.legalBasis("Article 39(e)(2) of Regulation (EC) No 178/2002")
.build()))
.recategorizations(Set.of(ManualRecategorization.builder()
.annotationId("3029651d0842a625f2d23f8375c23600")
.type("CBI_author")
.requestDate(OffsetDateTime.now())
.fileId(TEST_FILE_ID)
.build()))
.build());
.legalBasisChanges(Set.of(ManualLegalBasisChange.builder()
.annotationId("3029651d0842a625f2d23f8375c23600")
.section("[19, 2]: Paragraph: Contact point: LexCo Contact:")
.value("0049 331 441 551 14")
.requestDate(OffsetDateTime.now())
.fileId(TEST_FILE_ID)
.legalBasis("Article 39(e)(2) of Regulation (EC) No 178/2002")
.build()))
.recategorizations(Set.of(ManualRecategorization.builder()
.annotationId("3029651d0842a625f2d23f8375c23600")
.type("CBI_author")
.legalBasis("")
.requestDate(OffsetDateTime.now())
.fileId(TEST_FILE_ID)
.build()))
.build());
analyzeService.reanalyze(request);
System.out.println("Finished reanalysis");
@@ -1266,11 +1323,11 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
String manualAddId2 = UUID.randomUUID().toString();
List<Rectangle> positions = List.of(Rectangle.builder().topLeftX(305.35f).topLeftY(332.5033f).width(71.40744f).height(13.645125f).page(1).build());
ManualRedactionEntry manualRedactionEntry = getManualRedactionEntry(manualAddId,
positions,
"the manufacturing or production process, including the method and innovative aspects thereof, as well as other technical and industrial specifications inherent to that process or method, except for information which is relevant to the assessment of safety");
positions,
"the manufacturing or production process, including the method and innovative aspects thereof, as well as other technical and industrial specifications inherent to that process or method, except for information which is relevant to the assessment of safety");
ManualRedactionEntry manualRedactionEntry2 = getManualRedactionEntry(manualAddId2,
positions,
"commercial information revealing sourcing, market shares or business strategy of the applicant");
positions,
"commercial information revealing sourcing, market shares or business strategy of the applicant");
IdRemoval idRemoval = getIdRemoval(manualAddId);
IdRemoval idRemoval2 = getIdRemoval(manualAddId2);
@@ -1282,55 +1339,101 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
assertTrue(entityLog.getEntityLogEntry().stream().anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)));
assertEquals(entityLog.getEntityLogEntry().stream().filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)).findFirst().get().getState(), EntryState.APPLIED);
assertTrue(entityLog.getEntityLogEntry()
.stream()
.anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)));
assertEquals(entityLog.getEntityLogEntry()
.stream()
.filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId))
.findFirst()
.get().getState(), EntryState.APPLIED);
request.setManualRedactions(ManualRedactions.builder().entriesToAdd(Set.of(manualRedactionEntry)).idsToRemove(Set.of(idRemoval)).build());
analyzeService.reanalyze(request);
entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
assertTrue(entityLog.getEntityLogEntry().stream().anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)));
assertEquals(entityLog.getEntityLogEntry().stream().filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)).findFirst().get().getState(), EntryState.REMOVED);
assertTrue(entityLog.getEntityLogEntry()
.stream()
.anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)));
assertEquals(entityLog.getEntityLogEntry()
.stream()
.filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId))
.findFirst()
.get().getState(), EntryState.REMOVED);
request.setManualRedactions(ManualRedactions.builder().entriesToAdd(Set.of(manualRedactionEntry, manualRedactionEntry2)).idsToRemove(Set.of(idRemoval)).build());
analyzeService.reanalyze(request);
entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
assertTrue(entityLog.getEntityLogEntry().stream().anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)));
assertEquals(entityLog.getEntityLogEntry().stream().filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)).findFirst().get().getState(), EntryState.REMOVED);
assertTrue(entityLog.getEntityLogEntry().stream().anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2)));
assertEquals(entityLog.getEntityLogEntry().stream().filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2)).findFirst().get().getState(), EntryState.APPLIED);
assertTrue(entityLog.getEntityLogEntry()
.stream()
.anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)));
assertEquals(entityLog.getEntityLogEntry()
.stream()
.filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId))
.findFirst()
.get().getState(), EntryState.REMOVED);
assertTrue(entityLog.getEntityLogEntry()
.stream()
.anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2)));
assertEquals(entityLog.getEntityLogEntry()
.stream()
.filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2))
.findFirst()
.get().getState(), EntryState.APPLIED);
request.setManualRedactions(ManualRedactions.builder()
.entriesToAdd(Set.of(manualRedactionEntry, manualRedactionEntry2))
.idsToRemove(Set.of(idRemoval, idRemoval2))
.build());
.entriesToAdd(Set.of(manualRedactionEntry, manualRedactionEntry2))
.idsToRemove(Set.of(idRemoval, idRemoval2))
.build());
analyzeService.reanalyze(request);
entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
assertTrue(entityLog.getEntityLogEntry().stream().anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)));
assertEquals(entityLog.getEntityLogEntry().stream().filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)).findFirst().get().getState(), EntryState.REMOVED);
assertTrue(entityLog.getEntityLogEntry().stream().anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2)));
assertEquals(entityLog.getEntityLogEntry().stream().filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2)).findFirst().get().getState(), EntryState.REMOVED);
assertTrue(entityLog.getEntityLogEntry()
.stream()
.anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)));
assertEquals(entityLog.getEntityLogEntry()
.stream()
.filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId))
.findFirst()
.get().getState(), EntryState.REMOVED);
assertTrue(entityLog.getEntityLogEntry()
.stream()
.anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2)));
assertEquals(entityLog.getEntityLogEntry()
.stream()
.filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2))
.findFirst()
.get().getState(), EntryState.REMOVED);
manualRedactionEntry.setRequestDate(OffsetDateTime.now());
request.setManualRedactions(ManualRedactions.builder()
.entriesToAdd(Set.of(manualRedactionEntry, manualRedactionEntry2))
.idsToRemove(Set.of(idRemoval, idRemoval2))
.build());
request.setManualRedactions(ManualRedactions.builder().entriesToAdd(Set.of(manualRedactionEntry, manualRedactionEntry2)).idsToRemove(Set.of(idRemoval2)).build());
analyzeService.reanalyze(request);
entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
assertTrue(entityLog.getEntityLogEntry().stream().anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)));
assertEquals(entityLog.getEntityLogEntry().stream().filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)).findFirst().get().getState(), EntryState.APPLIED);
assertTrue(entityLog.getEntityLogEntry().stream().anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2)));
assertEquals(entityLog.getEntityLogEntry().stream().filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2)).findFirst().get().getState(), EntryState.REMOVED);
assertTrue(entityLog.getEntityLogEntry()
.stream()
.anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId)));
assertEquals(entityLog.getEntityLogEntry()
.stream()
.filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId))
.findFirst()
.get().getState(), EntryState.APPLIED);
assertTrue(entityLog.getEntityLogEntry()
.stream()
.anyMatch(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2)));
assertEquals(entityLog.getEntityLogEntry()
.stream()
.filter(entityLogEntry -> entityLogEntry.getId().equals(manualAddId2))
.findFirst()
.get().getState(), EntryState.REMOVED);
}
@Test
@SneakyThrows
public void testResizeWithUpdateDictionaryTrue() {
@@ -1342,34 +1445,44 @@ public class RedactionIntegrationTest extends AbstractRedactionIntegrationTest {
analyzeService.analyze(request);
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var david = entityLog.getEntityLogEntry().stream().filter(e -> e.getValue().equals("David")).findFirst().get();
var david = entityLog.getEntityLogEntry()
.stream()
.filter(e -> e.getValue().equals("David"))
.findFirst()
.get();
request.setManualRedactions(ManualRedactions.builder()
.resizeRedactions(Set.of(ManualResizeRedaction.builder()
.updateDictionary(true)
.annotationId(david.getId())
.requestDate(OffsetDateTime.now())
.value("David Ksenia")
.positions(List.of(Rectangle.builder().topLeftX(56.8f).topLeftY(293.564f).width(65.592f).height(15.408f).page(1).build()))
.addToAllDossiers(false)
.build()))
.build());
.resizeRedactions(Set.of(ManualResizeRedaction.builder()
.updateDictionary(true)
.annotationId(david.getId())
.requestDate(OffsetDateTime.now())
.value("David Ksenia")
.positions(List.of(Rectangle.builder()
.topLeftX(56.8f)
.topLeftY(293.564f)
.width(65.592f)
.height(15.408f)
.page(1)
.build()))
.addToAllDossiers(false)
.build()))
.build());
analyzeService.reanalyze(request);
entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var resizedEntity = entityLog.getEntityLogEntry().stream().filter(e -> e.getId().equals(david.getId())).findFirst().get();
var resizedEntity = entityLog.getEntityLogEntry()
.stream()
.filter(e -> e.getId().equals(david.getId()))
.findFirst()
.get();
assertEquals(resizedEntity.getState(), EntryState.APPLIED);
assertEquals(resizedEntity.getValue(), "David Ksenia");
assertEquals(resizedEntity.getValue(), "David");
assertEquals(0, resizedEntity.getManualChanges().size());
}
private IdRemoval getIdRemoval(String id) {
return IdRemoval.builder()
.annotationId(id)
.removeFromAllDossiers(false)
.removeFromDictionary(false)
.requestDate(OffsetDateTime.now())
.build();
return IdRemoval.builder().annotationId(id).removeFromAllDossiers(false).removeFromDictionary(false).requestDate(OffsetDateTime.now()).build();
}
@@ -63,8 +63,8 @@ public class AnnotationService {
public AnnotateResponse annotate(AnnotateRequest annotateRequest) {
var storedObjectFile = redactionStorageService.getStoredObjectFile(RedactionStorageService.StorageIdUtils.getStorageId(annotateRequest.getDossierId(),
annotateRequest.getFileId(),
FileType.VIEWER_DOCUMENT));
annotateRequest.getFileId(),
FileType.VIEWER_DOCUMENT));
var entityLog = redactionStorageService.getEntityLog(annotateRequest.getDossierId(), annotateRequest.getFileId());
@@ -79,7 +79,8 @@ public class AnnotationService {
try (ByteArrayOutputStream byteArrayOutputStream = new ByteArrayOutputStream()) {
pdDocument.save(byteArrayOutputStream);
return AnnotateResponse.builder().document(byteArrayOutputStream.toByteArray()).build();
return AnnotateResponse.builder().document(byteArrayOutputStream.toByteArray())
.build();
}
}
}
@@ -137,7 +138,10 @@ public class AnnotationService {
List<PDAnnotation> annotations = new ArrayList<>();
List<Position> rectangles = redactionLogEntry.getPositions().stream().filter(pos -> pos.getPageNumber() == page).collect(Collectors.toList());
List<Position> rectangles = redactionLogEntry.getPositions()
.stream()
.filter(pos -> pos.getPageNumber() == page)
.collect(Collectors.toList());
if (rectangles.isEmpty()) {
return annotations;
@@ -154,22 +158,25 @@ public class AnnotationService {
float[] color;
if (redactionLogEntry.getEntryType().equals(EntryType.RECOMMENDATION)) {
color = new float[]{0, 0.8f, 0};
} else if ((redactionLogEntry.getEntryType().equals(EntryType.ENTITY) || redactionLogEntry.getEntryType().equals(EntryType.IMAGE)) &&//
redactionLogEntry.getState().equals(EntryState.APPLIED)) {
} else if ((redactionLogEntry.getEntryType().equals(EntryType.ENTITY) || redactionLogEntry.getEntryType().equals(EntryType.IMAGE)) //
&& redactionLogEntry.getState().equals(EntryState.APPLIED)) {
color = new float[]{0.5764706f, 0.59607846f, 0.627451f};
} else if ((redactionLogEntry.getEntryType().equals(EntryType.ENTITY) || redactionLogEntry.getEntryType().equals(EntryType.IMAGE)) &&//
redactionLogEntry.getState().equals(EntryState.SKIPPED)) {
} else if ((redactionLogEntry.getEntryType().equals(EntryType.ENTITY) || redactionLogEntry.getEntryType().equals(EntryType.IMAGE)) //
&& (redactionLogEntry.getState().equals(EntryState.SKIPPED) || redactionLogEntry.getState().equals(EntryState.IGNORED))) {
color = new float[]{0.76862746f, 0.59607846f, 0.98039216f};
} else if (redactionLogEntry.getEntryType().equals(EntryType.HINT) && redactionLogEntry.getState().equals(EntryState.SKIPPED) && redactionLogEntry.getType().equals("published_information")) {
} else if (redactionLogEntry.getEntryType().equals(EntryType.HINT) && redactionLogEntry.getState().equals(EntryState.SKIPPED) && redactionLogEntry.getType()
.equals("published_information")) {
color = new float[]{0.52156866f, 0.92156863f, 1.0f};
} else if (redactionLogEntry.getEntryType().equals(EntryType.HINT) && redactionLogEntry.getState().equals(EntryState.SKIPPED)) {
color = new float[]{0.98039216f, 0.59607846f, 0.96862745f};
} else if (redactionLogEntry.getEntryType().equals(EntryType.HINT) && redactionLogEntry.getState().equals(EntryState.IGNORED)) {
color = new float[]{0.76862746f, 0.59607846f, 0.98039216f};
} else if (redactionLogEntry.getState().equals(EntryState.APPLIED)){
color = Optional.ofNullable(redactionLogEntry.getColor()).orElse(new float[]{0.5764706f, 0.59607846f, 0.627451f});
} else if (redactionLogEntry.getState().equals(EntryState.APPLIED)) {
color = Optional.ofNullable(redactionLogEntry.getColor())
.orElse(new float[]{0.5764706f, 0.59607846f, 0.627451f});
} else {
color = Optional.ofNullable(redactionLogEntry.getColor()).orElse(new float[]{0.76862746f, 0.59607846f, 0.98039216f});
color = Optional.ofNullable(redactionLogEntry.getColor())
.orElse(new float[]{0.76862746f, 0.59607846f, 0.98039216f});
}
annotation.setColor(new PDColor(color, PDDeviceRGB.INSTANCE));
annotation.setNoRotate(false);
@@ -194,7 +201,10 @@ public class AnnotationService {
public static List<Double> toQuadPoints(List<Position> rectangles) {
return rectangles.stream().map(Position::toRectangle2D).flatMap(AnnotationService::toQuadPoints).toList();
return rectangles.stream()
.map(Position::toRectangle2D)
.flatMap(AnnotationService::toQuadPoints)
.toList();
}
@@ -218,12 +228,20 @@ public class AnnotationService {
private String createAnnotationContent(EntityLogEntry redactionLogEntry) {
return redactionLogEntry.getType() +//
" \nRule " + redactionLogEntry.getMatchedRule() +//
" matched\n\n" + redactionLogEntry.getReason() +//
"\n\nLegal basis:" + redactionLogEntry.getLegalBasis() +//
"\n\nIn section: \"" + redactionLogEntry.getSection() + "\"" +//
"\n\nChanges: " + redactionLogEntry.getChanges().stream().map(Change::getType).map(Enum::name).collect(Collectors.joining("\n")) +//
"\n\nManualChanges: " + redactionLogEntry.getManualChanges().stream().map(ManualChange::getManualRedactionType).map(Enum::name).collect(Collectors.joining("\n"));
" \nRule " + redactionLogEntry.getMatchedRule() +//
" matched\n\n" + redactionLogEntry.getReason() +//
"\n\nLegal basis:" + redactionLogEntry.getLegalBasis() +//
"\n\nIn section: \"" + redactionLogEntry.getSection() + "\"" +//
"\n\nChanges: " + redactionLogEntry.getChanges()
.stream()
.map(Change::getType)
.map(Enum::name)
.collect(Collectors.joining("\n")) +//
"\n\nManualChanges: " + redactionLogEntry.getManualChanges()
.stream()
.map(ManualChange::getManualRedactionType)
.map(Enum::name)
.collect(Collectors.joining("\n"));
}
}
@@ -5,7 +5,7 @@ import static org.junit.jupiter.api.Assertions.assertThrows;
import org.junit.jupiter.api.Test;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
public class TextEntityTest {
@@ -13,7 +13,7 @@ public class TextEntityTest {
@Test
public void testMatchedRule() {
ManualEntity entity = ManualEntity.builder()
PrecursorEntity entity = PrecursorEntity.builder()
.type("PII")
.entityType(EntityType.ENTITY)
.build();
@@ -31,7 +31,7 @@ public class TextEntityTest {
@Test
public void testMatchedRuleWithNonsense() {
ManualEntity entity = ManualEntity.builder()
PrecursorEntity entity = PrecursorEntity.builder()
.type("PII")
.entityType(EntityType.ENTITY)
.build();
@@ -0,0 +1,162 @@
package com.iqser.red.service.redaction.v1.server.document.graph;
import static com.iqser.red.service.redaction.v1.server.utils.EntityVisualizationUtility.ENTITY_LAYER;
import static org.junit.jupiter.api.Assertions.assertEquals;
import java.awt.Color;
import java.io.File;
import java.io.FileOutputStream;
import java.nio.file.Path;
import java.util.List;
import java.util.Set;
import java.util.function.Function;
import java.util.stream.Collectors;
import org.drools.io.ClassPathResource;
import org.junit.jupiter.api.BeforeEach;
import org.junit.jupiter.api.Test;
import org.springframework.beans.factory.annotation.Autowired;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.dossier.file.FileType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.NodeType;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Table;
import com.iqser.red.service.redaction.v1.server.service.document.EntityCreationService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityEnrichmentService;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import com.iqser.red.service.redaction.v1.server.utils.EntityVisualizationUtility;
import com.knecon.fforesight.service.viewerdoc.model.Visualizations;
import com.knecon.fforesight.service.viewerdoc.service.ViewerDocumentService;
import com.knecon.fforesight.tenantcommons.TenantContext;
import lombok.SneakyThrows;
public class TableTest extends BuildDocumentIntegrationTest {
private static final boolean DRAW_FILE = false;
@Autowired
private EntityEnrichmentService entityEnrichmentService;
private EntityCreationService entityCreationService;
private static final String TYPE_1 = "type1";
private static final String TYPE_2 = "type2";
private static final String TYPE_3 = "type3";
private static final String TYPE_4 = "type4";
private Table table;
private Set<TextEntity> entities;
@SneakyThrows
@BeforeEach
public void createTable() {
entityCreationService = new EntityCreationService(entityEnrichmentService);
String fileName = "files/Minimal Examples/BasicTable.pdf";
Document document = buildGraph(fileName);
table = (Table) document.streamAllSubNodesOfType(NodeType.TABLE)
.findAny()
.orElseThrow();
entities = List.of(//
entityCreationService.byString("Cell11", TYPE_1, EntityType.ENTITY, document),
entityCreationService.byString("Cell21", TYPE_1, EntityType.ENTITY, document),
entityCreationService.byString("Cell31", TYPE_1, EntityType.ENTITY, document),
entityCreationService.byString("Cell41", TYPE_1, EntityType.ENTITY, document),
entityCreationService.byString("Cell51", TYPE_1, EntityType.ENTITY, document),
entityCreationService.byString("Cell12", TYPE_2, EntityType.ENTITY, document),
entityCreationService.byString("Cell32", TYPE_2, EntityType.ENTITY, document),
entityCreationService.byString("Cell42", TYPE_2, EntityType.ENTITY, document),
entityCreationService.byString("Cell23", TYPE_3, EntityType.ENTITY, document),
entityCreationService.byString("Cell53", TYPE_3, EntityType.ENTITY, document),
entityCreationService.byString("Cell14", TYPE_4, EntityType.ENTITY, document),
entityCreationService.byString("Cell34", TYPE_4, EntityType.ENTITY, document))
.stream()
.flatMap(Function.identity())
.collect(Collectors.toSet());
if (DRAW_FILE) {
File file = new File("/tmp/" + Path.of(fileName).getFileName().toString());
storageService.downloadTo(TenantContext.getTenantId(),
RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.VIEWER_DOCUMENT),
file);
ViewerDocumentService viewerDocumentService = new ViewerDocumentService(null);
var visualizationsOnPage = EntityVisualizationUtility.createVisualizationsOnPage(document.getEntities(), Color.MAGENTA);
viewerDocumentService.addVisualizationsOnPage(file,
file,
Visualizations.builder()
.layer(ENTITY_LAYER)
.visualizationsOnPages(visualizationsOnPage)
.layerVisibilityDefaultValue(true)
.build());
}
}
@Test
public void testStreamEntitiesWhereRowContainsEntitiesOfType() {
int type_2_count = table.getEntitiesOfType(TYPE_2).size();
assertEquals(type_2_count,
table.streamEntitiesWhereRowContainsEntitiesOfType(List.of(TYPE_1))
.filter(textEntity -> textEntity.type().equals(TYPE_2))
.count());
assertEquals(type_2_count,
table.streamEntitiesWhereRowContainsEntitiesOfType(List.of(TYPE_1, TYPE_4))
.filter(textEntity -> textEntity.type().equals(TYPE_2))
.count());
assertEquals(2,
table.streamEntitiesWhereRowContainsEntitiesOfEachType(List.of(TYPE_1, TYPE_4))
.filter(textEntity -> textEntity.type().equals(TYPE_2))
.count());
assertEquals(0,
table.streamEntitiesWhereRowContainsEntitiesOfEachType(List.of(TYPE_1, TYPE_3))
.filter(textEntity -> textEntity.type().equals(TYPE_2))
.count());
assertEquals(0,
table.streamEntitiesWhereRowContainsEntitiesOfEachType(List.of(TYPE_1, TYPE_3, TYPE_4))
.filter(textEntity -> textEntity.type().equals(TYPE_2))
.count());
assertEquals(type_2_count,
table.streamEntitiesWhereRowContainsEntitiesOfEachType(List.of())
.filter(textEntity -> textEntity.type().equals(TYPE_2))
.count());
assertEquals(3,
table.streamTextEntitiesInRow(1)
.count());
assertEquals(2,
table.streamTextEntitiesInRow(4)
.count());
assertEquals(5,
table.streamTextEntitiesInCol(1)
.count());
assertEquals(3,
table.streamTextEntitiesInRow(3)
.count());
}
}
@@ -1,5 +1,6 @@
package com.iqser.red.service.redaction.v1.server.drools.files.management.services;
import static org.junit.jupiter.api.Assertions.assertEquals;
import static org.junit.jupiter.api.Assertions.assertFalse;
import static org.junit.jupiter.api.Assertions.assertTrue;
@@ -18,6 +19,7 @@ import org.springframework.core.io.ClassPathResource;
import com.iqser.red.service.persistence.service.v1.api.shared.model.RuleFileType;
import com.iqser.red.service.redaction.v1.model.DroolsSyntaxValidation;
import com.iqser.red.service.redaction.v1.model.RuleValidationModel;
import com.iqser.red.service.redaction.v1.server.DeprecatedElementsFinder;
import com.iqser.red.service.redaction.v1.server.client.RulesClient;
import com.iqser.red.service.redaction.v1.server.model.drools.RuleFileBluePrint;
import com.iqser.red.service.redaction.v1.server.service.document.EntityEnrichmentService;
@@ -47,13 +49,15 @@ class DroolsSyntaxValidationServiceTest {
@SneakyThrows
void testRules() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@@ -62,14 +66,16 @@ class DroolsSyntaxValidationServiceTest {
@SneakyThrows
void testRulesWithRemovedImportsAndChangedName() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
rulesString = rulesString.replaceAll("import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;", "");
rulesString = rulesString.replaceAll("rule \"LDS.0.0: Run local dictionary search\"", "rule \"LDS.0.0: run local dictionary search\"");
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@@ -77,102 +83,32 @@ class DroolsSyntaxValidationServiceTest {
@SneakyThrows
void testRulesWithAddedImports() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
rulesString = rulesString.replaceAll("import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;", "import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;\nimport com.iqser.red.service.redaction.v1.server.service.document.EntityComparators;");
rulesString = rulesString.replaceAll("import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;",
"import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;\nimport com.iqser.red.service.redaction.v1.server.service.document.EntityComparators;");
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@Test
@SneakyThrows
void testRulesWithUnallowedAddedImports() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
var rulesFile = new ClassPathResource("drools/rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
rulesString = rulesString.replaceAll("import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;", "import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;\nimport com.google.common.collect.Sets;");
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
assertFalse(droolsSyntaxValidation.isCompiled());
}
@Test
@SneakyThrows
void testAllRules() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
var rulesFile = new ClassPathResource("drools/all_redact_manager_rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@Test
@SneakyThrows
void testAcceptanceRules() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
var rulesFile = new ClassPathResource("drools/acceptance_rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@Test
@SneakyThrows
void testManualRedactionRules() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
var rulesFile = new ClassPathResource("drools/manual_redaction_rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@Test
@SneakyThrows
void testRulesV2() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
var rulesFile = new ClassPathResource("drools/rules_v2.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@Test
@SneakyThrows
void testDocumineRules() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/documine_flora.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@@ -181,7 +117,8 @@ class DroolsSyntaxValidationServiceTest {
@SneakyThrows
void testCorruptedRules() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
@@ -196,12 +133,13 @@ class DroolsSyntaxValidationServiceTest {
@SneakyThrows
void testCorruptedImports() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
String corruptedRules = rulesString.replaceAll("import com.iqser.red.service.redaction.v1.server.model.document.nodes.ImageType;",
"import com.iqser.red.service.redaction.v1.server.model.document.nodes.ImageType;\nimport com.iqser.red.service.redaction.v1.server.model.document.nodes.SomethingElse;");
"import com.iqser.red.service.redaction.v1.server.model.document.nodes.ImageType;\nimport com.iqser.red.service.redaction.v1.server.model.document.nodes.SomethingElse;");
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), corruptedRules));
assertFalse(droolsSyntaxValidation.isCompiled());
@@ -212,14 +150,16 @@ class DroolsSyntaxValidationServiceTest {
@SneakyThrows
void testRemoveQuery() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
String corruptedRules = rulesString.replaceAll("query \"getFileAttributes\"\n.*\n *end", "");
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), corruptedRules));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertFalse(droolsSyntaxValidation.isCompiled());
}
@@ -228,13 +168,15 @@ class DroolsSyntaxValidationServiceTest {
@SneakyThrows
void testComponentDrools() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/documine_flora_components.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.COMPONENT.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@@ -243,13 +185,15 @@ class DroolsSyntaxValidationServiceTest {
@SneakyThrows
void testComponentDroolsAsEntityDrools() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/documine_flora_components.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages().forEach(System.out::println);
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertFalse(droolsSyntaxValidation.isCompiled());
}
@@ -259,13 +203,15 @@ class DroolsSyntaxValidationServiceTest {
@Disabled
void attemptImportsFixToAllRuleFiles() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient));
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
List<String> ruleFiles = List.of("drools/rules.drl", "drools/all_redact_manager_rules.drl",
"drools/documine_flora.drl",
"drools/manual_redaction_rules.drl",
"drools/acceptance_rules.drl",
"drools/rules_v2.drl");
List<String> ruleFiles = List.of("drools/rules.drl",
"drools/all_redact_manager_rules.drl",
"drools/documine_flora.drl",
"drools/manual_redaction_rules.drl",
"drools/acceptance_rules.drl",
"drools/rules_v2.drl");
for (String ruleFile : ruleFiles) {
var rulesFile = new ClassPathResource(ruleFile);
@@ -288,4 +234,109 @@ class DroolsSyntaxValidationServiceTest {
}
@Test
@SneakyThrows
void testRulesWithUnallowedAddedImports() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
rulesString = rulesString.replaceAll("import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;",
"import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;\nimport com.google.common.collect.Sets;");
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertFalse(droolsSyntaxValidation.isCompiled());
}
@Test
@SneakyThrows
void testAllRules() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/all_redact_manager_rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@Test
@SneakyThrows
void testAcceptanceRules() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/acceptance_rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@Test
@SneakyThrows
void testManualRedactionRules() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/manual_redaction_rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@Test
@SneakyThrows
void testRulesV2() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/rules_v2.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
}
@Test
@SneakyThrows
void testRulesWithDeprecatedFunctions() {
DroolsSyntaxValidationService droolsSyntaxValidationService = new DroolsSyntaxValidationService(new KieContainerCreationService(rulesClient),
new DeprecatedElementsFinder());
var rulesFile = new ClassPathResource("drools/rules.drl");
String rulesString = new String(rulesFile.getInputStream().readAllBytes());
rulesString = rulesString.replaceAll(".resize\\(", ".resizeEntityAndReinsert(");
DroolsSyntaxValidation droolsSyntaxValidation = droolsSyntaxValidationService.testRules(new RuleValidationModel(RuleFileType.ENTITY.name(), rulesString));
droolsSyntaxValidation.getDroolsSyntaxErrorMessages()
.forEach(System.out::println);
assertTrue(droolsSyntaxValidation.isCompiled());
assertEquals(droolsSyntaxValidation.getDroolsSyntaxDeprecatedWarnings().size(), 2);
}
}
@@ -38,6 +38,7 @@ import com.iqser.red.commons.jackson.ObjectMapperFactory;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeResult;
import com.iqser.red.service.persistence.service.v1.api.shared.model.RuleFileType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryState;
@@ -58,7 +59,6 @@ import com.iqser.red.service.redaction.v1.server.Application;
import com.iqser.red.service.redaction.v1.server.annotate.AnnotateRequest;
import com.iqser.red.service.redaction.v1.server.annotate.AnnotateResponse;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.redaction.utils.OsUtils;
import com.iqser.red.service.redaction.v1.server.service.document.DocumentGraphMapper;
@@ -318,6 +318,7 @@ public class ManualChangesEnd2EndTest extends AbstractRedactionIntegrationTest {
.filter(entry -> entry.getValue().equals("Oxford University Press"))
.findFirst()
.get();
assertFalse(oxfordUniversityPress.getEngines().contains(Engine.MANUAL));
var asyaLyon = redactionLog.getEntityLogEntry()
.stream()
@@ -364,6 +365,7 @@ public class ManualChangesEnd2EndTest extends AbstractRedactionIntegrationTest {
assertEquals(asyaLyon2.getState(), EntryState.APPLIED);
assertEquals(1, oxfordUniversityPressRecategorized.getManualChanges().size());
assertTrue(oxfordUniversityPressRecategorized.getEngines().contains(Engine.MANUAL));
}
@@ -401,10 +403,58 @@ public class ManualChangesEnd2EndTest extends AbstractRedactionIntegrationTest {
analyzeService.reanalyze(request);
EntityLog entityLog = redactionStorageService.getEntityLog(request.getDossierId(), request.getFileId());
EntityLogEntry entityLogEntry = entityLog.getEntityLogEntry().stream().filter(entry -> entry.getId().equals(annotationId)).findFirst().orElseThrow();
EntityLogEntry entityLogEntry = entityLog.getEntityLogEntry()
.stream()
.filter(entry -> entry.getId().equals(annotationId))
.findFirst()
.orElseThrow();
assertEquals("Expand to Hint", entityLogEntry.getValue());
assertEquals(1, entityLogEntry.getPositions().size());
assertEquals(ManualRedactionType.RESIZE, entityLogEntry.getManualChanges().get(entityLogEntry.getManualChanges().size() - 1).getManualRedactionType());
assertEquals(ManualRedactionType.RESIZE,
entityLogEntry.getManualChanges()
.get(entityLogEntry.getManualChanges().size() - 1).getManualRedactionType());
assertTrue(entityLogEntry.getEngines().contains(Engine.MANUAL));
}
@Test
@SneakyThrows
public void testAddEngineManualToResizeDictionaryEntry() {
String filePath = "files/new/crafted document.pdf";
AnalyzeRequest request = uploadFileToStorage(filePath);
analyzeDocumentStructure(LayoutParsingType.REDACT_MANAGER, request);
AnalyzeResult result = analyzeService.analyze(request);
ManualRedactions manualRedactions = new ManualRedactions();
EntityLog entityLog = redactionStorageService.getEntityLog(request.getDossierId(), request.getFileId());
var dictionaryEntry = entityLog.getEntityLogEntry()
.stream()
.filter(entry -> entry.isDictionaryEntry() || entry.isDossierDictionaryEntry())
.findFirst()
.get();
ManualResizeRedaction manualResizeRedaction = ManualResizeRedaction.builder()
.annotationId(dictionaryEntry.getId())
.requestDate(OffsetDateTime.now())
.value("Image")
.positions(List.of(new Rectangle(new Point(56.8f, 496.27f), 61.25f, 12.83f, 1)))
.updateDictionary(true)
.build();
manualRedactions.setResizeRedactions(Set.of(manualResizeRedaction));
request.setManualRedactions(manualRedactions);
analyzeService.reanalyze(request);
entityLog = redactionStorageService.getEntityLog(request.getDossierId(), request.getFileId());
EntityLogEntry entityLogEntry = entityLog.getEntityLogEntry()
.stream()
.filter(entry -> entry.getId().equals(dictionaryEntry.getId()))
.findFirst()
.orElseThrow();
assertEquals(ManualRedactionType.RESIZE_IN_DICTIONARY,
entityLogEntry.getManualChanges()
.get(entityLogEntry.getManualChanges().size() - 1).getManualRedactionType());
assertTrue(entityLogEntry.getEngines().contains(Engine.MANUAL));
}
}
@@ -115,7 +115,12 @@ public class ManualChangesUnitTest extends BuildDocumentIntegrationTest {
assertEquals(legalBasis, entity.getManualOverwrite().getLegalBasis().orElse(entity.getMatchedRule().getLegalBasis()));
assertEquals(section, entity.getManualOverwrite().getSection().orElse(entity.getDeepestFullyContainingNode().toString()));
ManualRecategorization imageRecategorizationRequest = ManualRecategorization.builder().type("type").requestDate(start.plusSeconds(5)).annotationId(annotationId).build();
ManualRecategorization imageRecategorizationRequest = ManualRecategorization.builder()
.type("type")
.requestDate(start.plusSeconds(5))
.annotationId(annotationId)
.legalBasis("")
.build();
entity.getManualOverwrite().addChange(imageRecategorizationRequest);
assertTrue(entity.getManualOverwrite().getRecategorized().isPresent());
assertTrue(entity.getManualOverwrite().getRecategorized().get());
@@ -25,7 +25,7 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Point;
import com.iqser.red.service.redaction.v1.server.document.graph.BuildDocumentIntegrationTest;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryVersion;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.IEntity;
@@ -35,17 +35,17 @@ import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import com.iqser.red.service.redaction.v1.server.service.EntityLogCreatorService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityCreationService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityEnrichmentService;
import com.iqser.red.service.redaction.v1.server.service.document.ManualEntityCreationService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityFromPrecursorCreationService;
import lombok.SneakyThrows;
public class ManualEntityTest extends BuildDocumentIntegrationTest {
public class PrecursorEntityTest extends BuildDocumentIntegrationTest {
@Autowired
private EntityEnrichmentService entityEnrichmentService;
@Autowired
private ManualEntityCreationService manualEntityCreationService;
private EntityFromPrecursorCreationService entityFromPrecursorCreationService;
@Autowired
private EntityLogCreatorService entityLogCreatorService;
@@ -122,7 +122,7 @@ public class ManualEntityTest extends BuildDocumentIntegrationTest {
assertTrue(document.getEntities().isEmpty());
List<ManualEntity> notFoundManualEntities = manualEntityCreationService.createRedactionEntitiesIfFoundAndReturnNotFoundEntries(ManualRedactions.builder().entriesToAdd(Set.of(manualRedactionEntry)).build(),
List<PrecursorEntity> notFoundManualEntities = entityFromPrecursorCreationService.createEntitiesIfFoundAndReturnNotFoundEntries(ManualRedactions.builder().entriesToAdd(Set.of(manualRedactionEntry)).build(),
document,
TEST_DOSSIER_TEMPLATE_ID);
assertEquals(1, notFoundManualEntities.size());
@@ -162,7 +162,7 @@ public class ManualEntityTest extends BuildDocumentIntegrationTest {
.reason("reason")
.legalBasis("n-a")
.section(tempEntity.getDeepestFullyContainingNode().toString())
.rectangle(true)
.rectangle(false)
.positions(positions)
.requestDate(OffsetDateTime.now())
.textAfter("")
@@ -172,7 +172,7 @@ public class ManualEntityTest extends BuildDocumentIntegrationTest {
tempEntity.removeFromGraph();
assertTrue(document.getEntities().isEmpty());
List<ManualEntity> notFoundManualEntities = manualEntityCreationService.createRedactionEntitiesIfFoundAndReturnNotFoundEntries(ManualRedactions.builder().entriesToAdd(Set.of(manualRedactionEntry)).build(),
List<PrecursorEntity> notFoundManualEntities = entityFromPrecursorCreationService.createEntitiesIfFoundAndReturnNotFoundEntries(ManualRedactions.builder().entriesToAdd(Set.of(manualRedactionEntry)).build(),
document,
TEST_DOSSIER_TEMPLATE_ID);
assertTrue(notFoundManualEntities.isEmpty());
@@ -16,8 +16,8 @@ class SemanticNodeComparatorsTest {
@Test
public void testFirstSemanticNode() {
var node = new Section(List.of(0, 1), null, null, null, null);
var otherNode = new Section(List.of(0, 2), null, null, null, null);
var node = new Section(List.of(0, 1), null, null, null, null,null);
var otherNode = new Section(List.of(0, 2), null, null, null, null,null);
List<SemanticNode> list = new ArrayList<>();
list.add(otherNode);
list.add(node);
@@ -29,8 +29,8 @@ class SemanticNodeComparatorsTest {
@Test
public void testFirstSemanticNode2() {
var node = new Section(Collections.emptyList(), null, null, null, null);
var otherNode = new Section(List.of(0, 2), null, null, null, null);
var node = new Section(Collections.emptyList(), null, null, null, null, null);
var otherNode = new Section(List.of(0, 2), null, null, null, null, null);
List<SemanticNode> list = new ArrayList<>();
list.add(otherNode);
list.add(node);
@@ -42,8 +42,8 @@ class SemanticNodeComparatorsTest {
@Test
public void testFirstSemanticNode3() {
var node = new Section(List.of(1, 5, 8), null, null, null, null);
var otherNode = new Section(List.of(0, 2), null, null, null, null);
var node = new Section(List.of(1, 5, 8), null, null, null, null, null);
var otherNode = new Section(List.of(0, 2), null, null, null, null, null);
List<SemanticNode> list = new ArrayList<>();
list.add(otherNode);
list.add(node);
@@ -55,8 +55,8 @@ class SemanticNodeComparatorsTest {
@Test
public void testFirstSemanticNode4() {
var node = new Section(List.of(1, 5, 8), null, null, null, null);
var otherNode = new Section(List.of(1, 5, 9), null, null, null, null);
var node = new Section(List.of(1, 5, 8), null, null, null, null,null);
var otherNode = new Section(List.of(1, 5, 9), null, null, null, null,null);
List<SemanticNode> list = new ArrayList<>();
list.add(otherNode);
list.add(node);
@@ -0,0 +1,61 @@
package com.iqser.red.service.redaction.v1.server.utils;
import java.awt.Color;
import java.util.Collection;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import org.apache.pdfbox.cos.COSName;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Page;
import com.knecon.fforesight.service.viewerdoc.ContentStreams;
import com.knecon.fforesight.service.viewerdoc.model.ColoredRectangle;
import com.knecon.fforesight.service.viewerdoc.model.VisualizationsOnPage;
import lombok.experimental.UtilityClass;
@UtilityClass
public class EntityVisualizationUtility {
public static final ContentStreams.Identifier ENTITY_LAYER = new ContentStreams.Identifier("Entities", COSName.getPDFName("KNECON_ENTITIES"), true);
public Map<Integer, VisualizationsOnPage> createVisualizationsOnPage(Collection<TextEntity> entity, Color color) {
Map<Integer, VisualizationsOnPage> visualizations = new HashMap<>();
Set<Page> pages = entity.stream()
.map(TextEntity::getPages)
.flatMap(Collection::stream)
.collect(Collectors.toSet());
pages.forEach(page -> visualizations.put(page.getNumber() - 1, buildVisualizationsOnPage(color, page)));
return visualizations;
}
private static VisualizationsOnPage buildVisualizationsOnPage(Color color, Page page) {
return VisualizationsOnPage.builder().coloredRectangles(getEntityRectangles(color, page)).build();
}
private static List<ColoredRectangle> getEntityRectangles(Color color, Page page) {
return page.getEntities()
.stream()
.map(TextEntity::getPositionsOnPagePerPage)
.flatMap(Collection::stream)
.filter(p -> p.getPage().equals(page))
.map(PositionOnPage::getRectanglePerLine)
.flatMap(Collection::stream)
.map(r -> new ColoredRectangle(r, color, 1))
.toList();
}
}
@@ -29,11 +29,14 @@ public class LayoutParsingRequestProvider {
.originFileStorageId(originFileStorageId)
.tablesFileStorageId(Optional.of(tablesFileStorageId))
.imagesFileStorageId(Optional.of(imagesFileStorageId))
.visualLayoutParsingFileId(Optional.empty())
.structureFileStorageId(structureFileStorageId)
.textBlockFileStorageId(textBlockFileStorageId)
.positionBlockFileStorageId(positionBlockFileStorageId)
.pageFileStorageId(pageFileStorageId)
.simplifiedTextStorageId(simplifiedTextStorageId).viewerDocumentStorageId(viewerDocumentStorageId)
.simplifiedTextStorageId(simplifiedTextStorageId)
.viewerDocumentStorageId(viewerDocumentStorageId)
.visualLayoutParsingFileId(Optional.empty())
.build();
}
@@ -54,6 +54,8 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
global Document document
global EntityCreationService entityCreationService
global ManualChangesApplicationService manualChangesApplicationService
@@ -690,13 +692,22 @@ rule "ETC.3.1: Redact logos (vertebrate study)"
// Rule unit: ETC.5
rule "ETC.5.0: Ignore dossier_redaction entries if confidentiality is not 'confidential'"
rule "ETC.5.0: Skip dossier_redaction entries if confidentiality is 'confidential'"
when
FileAttribute(label == "Confidentiality", value == "confidential")
$dossierRedaction: TextEntity(type() == "dossier_redaction")
then
$dossierRedaction.skip("ETC.5.0", "Ignore dossier_redaction when confidential");
$dossierRedaction.getIntersectingNodes().forEach(node -> update(node));
end
rule "ETC.5.1: Remove dossier_redaction entries if confidentiality is not 'confidential'"
when
not FileAttribute(label == "Confidentiality", value == "confidential")
$dossierRedaction: TextEntity(type() == "dossier_redaction")
then
$dossierRedaction.ignore("ETC.5.0", "Ignore dossier redactions, when not confidential");
$dossierRedaction.getIntersectingNodes().forEach(node -> update(node));
$dossierRedaction.remove("ETC.5.1", "Remove dossier_redaction when not confidential");
retract($dossierRedaction);
end
@@ -846,7 +857,7 @@ rule "MAN.3.2: Apply image recategorization"
rule "MAN.3.3: Apply recategorization entities by default"
salience 128
when
$entity: IEntity(getManualOverwrite().getRecategorized().orElse(false))
$entity: TextEntity(getManualOverwrite().getRecategorized().orElse(false), !dictionary.isHint(type()))
then
$entity.apply("MAN.3.3", "Recategorized entities are applied by default.", $entity.legalBasis());
end
@@ -883,7 +894,7 @@ rule "X.0.0: Remove Entity contained by Entity of same type"
salience 65
when
$larger: TextEntity($type: type(), $entityType: entityType, active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges(), active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges())
then
$contained.remove("X.0.0", "remove Entity contained by Entity of same type");
retract($contained);
@@ -911,7 +922,7 @@ rule "X.2.0: Remove Entity of type ENTITY when contained by FALSE_POSITIVE"
salience 64
when
$falsePositive: TextEntity($type: type(), entityType == EntityType.FALSE_POSITIVE, active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges(), active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges())
then
$entity.getIntersectingNodes().forEach(node -> update(node));
$entity.remove("X.2.0", "remove Entity of type ENTITY when contained by FALSE_POSITIVE");
@@ -924,7 +935,7 @@ rule "X.3.0: Remove Entity of type RECOMMENDATION when contained by FALSE_RECOMM
salience 64
when
$falseRecommendation: TextEntity($type: type(), entityType == EntityType.FALSE_RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.3.0", "remove Entity of type RECOMMENDATION when contained by FALSE_RECOMMENDATION");
retract($recommendation);
@@ -936,7 +947,7 @@ rule "X.4.0: Remove Entity of type RECOMMENDATION when text range equals ENTITY
salience 256
when
$entity: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$entity.addEngines($recommendation.getEngines());
$recommendation.remove("X.4.0", "remove Entity of type RECOMMENDATION when text range equals ENTITY with same type");
@@ -949,7 +960,7 @@ rule "X.5.0: Remove Entity of type RECOMMENDATION when intersected by ENTITY"
salience 256
when
$entity: TextEntity((entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.0", "remove Entity of type RECOMMENDATION when intersected by ENTITY");
retract($recommendation);
@@ -959,7 +970,7 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
salience 256
when
$entity: TextEntity($type: type(), entityType == EntityType.RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.1", "remove Entity of type RECOMMENDATION when contained by RECOMMENDATION");
retract($recommendation);
@@ -967,26 +978,70 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
// Rule unit: X.6
rule "X.6.0: Remove Entity of lower rank, when contained by by entity of type ENTITY"
rule "X.6.0: Remove Entity of lower rank, when contained by entity of type ENTITY or HINT"
salience 32
when
$higherRank: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges(), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges())
then
$lowerRank.getIntersectingNodes().forEach(node -> update(node));
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY");
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY or HINT");
retract($lowerRank);
end
rule "X.6.1: remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity"
rule "X.6.1: remove Entity, when contained in another entity of type ENTITY or HINT with larger text range"
salience 32
when
$higherRank: TextEntity($type: type(), $value: value, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active(), !hasManualChanges())
$lowerRank: TextEntity(intersects($higherRank), type() != $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), active(), $lowerRank.getValue().length() > $value.length())
$outer: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$inner: TextEntity(containedBy($outer), type() != $type, $outer.getTextRange().length > getTextRange().length(), !hasManualChanges())
then
$higherRank.getIntersectingNodes().forEach(node -> update(node));
$higherRank.remove("X.6.1", "remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity");
retract($higherRank);
$inner.getIntersectingNodes().forEach(node -> update(node));
$inner.remove("X.6.1", "remove Entity, when contained in another entity of type ENTITY or HINT with larger text range");
retract($inner);
end
// Rule unit: X.8
rule "X.8.0: Remove Entity when text range and type equals to imported Entity"
salience 257
when
$entity: TextEntity($type: type(), engines contains Engine.IMPORTED, active())
$other: TextEntity(getTextRange().equals($entity.getTextRange()), this != $entity, type() == $type, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.0", "remove Entity when text range and type equals to imported Entity");
$entity.addEngines($other.getEngines());
retract($other);
end
rule "X.8.1: Remove Entity when intersected by imported Entity"
salience 256
when
$entity: TextEntity(engines contains Engine.IMPORTED, active())
$other: TextEntity(intersects($entity), this != $entity, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.1", "remove Entity when intersected by imported Entity");
retract($other);
end
// Rule unit: X.9
rule "X.9.0: Merge mostly contained signatures"
when
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI)
$signature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.ALGORITHM, mostlyContains($aiSignature, 0.8))
then
$aiSignature.remove("X.9.0", "removed because already contained by alogrithm signature");
$signature.addEngine(LayoutEngine.AI);
end
// Rule unit: X.10
rule "X.10.0: remove false positives of ai"
when
$anyImage: Image(engines contains LayoutEngine.ALGORITHM)
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI, !mostlyContainedBy($anyImage, 0.8))
then
$aiSignature.remove("X.10.0", "Removed because false positive");
end
@@ -54,6 +54,8 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
global Document document
global EntityCreationService entityCreationService
global ManualChangesApplicationService manualChangesApplicationService
@@ -157,18 +159,17 @@ rule "CBI.3.0: Redacted because Section contains a vertebrate"
rule "CBI.3.1: Redacted because table row contains a vertebrate"
when
$table: Table(hasEntitiesOfType("vertebrate"), (hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("vertebrate"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
$cellsWithvertebrate: TableCell() from $table.streamTableCellsWhichContainType("vertebrate").toList()
$tableCell: TableCell(row == $cellsWithvertebrate.row) from $table.streamTableCells().toList()
$authorOrAddress: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("vertebrate"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.applyWithReferences(
$authorOrAddress.applyWithReferences(
"CBI.3.1",
"Vertebrate found",
"Reg (EC) No 1107/2009 Art. 63 (2g)",
$table.getEntitiesOfTypeInSameRow("vertebrate", entity)
$table.getEntitiesOfTypeInSameRow("vertebrate", $authorOrAddress)
);
});
end
rule "CBI.3.2: Do not redact because Section does not contain a vertebrate"
@@ -207,23 +208,21 @@ rule "CBI.4.0: Do not redact Names and Addresses if no_redaction_indicator is fo
});
end
rule "CBI.4.1: Do not redact Names and Addresses if no_redaction_indicator is found in table row"
rule "CBI.4.1: Redacted because table row contains a vertebrate"
when
$table: Table(hasEntitiesOfType("no_redaction_indicator"),
hasEntitiesOfType("vertebrate"),
(hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("no_redaction_indicator"), hasEntitiesOfType("vertebrate"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
TableCell($row: row) from $table.streamTableCellsWhichContainType("vertebrate").toList()
TableCell(row == $row) from $table.streamTableCellsWhichContainType("no_redaction_indicator").toList()
$tableCell: TableCell(row == $row) from $table.streamTableCells().toList()
$authorOrAddress: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("vertebrate", "no-redaction_indicator"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.skipWithReferences(
$authorOrAddress.skipWithReferences(
"CBI.4.1",
"Vertebrate but a no redaction indicator found",
Stream.concat(
$table.getEntitiesOfTypeInSameRow("vertebrate", entity).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", entity).stream()).toList()
$table.getEntitiesOfTypeInSameRow("vertebrate", $authorOrAddress).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", $authorOrAddress).stream()).toList()
);
});
end
@@ -250,22 +249,20 @@ rule "CBI.5.0: Redact Names and Addresses if no_redaction_indicator but also red
rule "CBI.5.1: Redact Names and Addresses if no_redaction_indicator but also redaction_indicator is found in table row"
when
$table: Table(hasEntitiesOfType("no_redaction_indicator"),
hasEntitiesOfType("redaction_indicator"),
(hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("no_redaction_indicator"), hasEntitiesOfType("redaction_indicator"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
TableCell($row: row) from $table.streamTableCellsWhichContainType("redaction_indicator").toList()
TableCell(row == $row) from $table.streamTableCellsWhichContainType("no_redaction_indicator").toList()
$tableCell: TableCell(row == $row) from $table.streamTableCells().toList()
$entity: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("redaction_indicator", "no_redaction_indicator"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.applyWithReferences(
$entity.applyWithReferences(
"CBI.5.1",
"no_redaction_indicator but also redaction_indicator found",
"Reg (EC) No 1107/2009 Art. 63 (2g)",
Stream.concat(
$table.getEntitiesOfTypeInSameRow("vertebrate", entity).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", entity).stream()).toList()
$table.getEntitiesOfTypeInSameRow("redaction_indicator", $entity).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", $entity).stream()).toList()
);
});
end
@@ -355,18 +352,17 @@ rule "CBI.8.0: Redacted because Section contains must_redact entity"
rule "CBI.8.1: Redacted because table row contains must_redact entity"
when
$table: Table(hasEntitiesOfType("must_redact"), (hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("must_redact"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
$cellsWithMustRedact: TableCell() from $table.streamTableCellsWhichContainType("must_redact").toList()
$tableCell: TableCell(row == $cellsWithMustRedact.row) from $table.streamTableCells().toList()
$authorOrAddress: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("must_redact"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.applyWithReferences(
$authorOrAddress.applyWithReferences(
"CBI.8.1",
"must_redact entity found",
"Must_redact found",
"Reg (EC) No 1107/2009 Art. 63 (2g)",
$table.getEntitiesOfTypeInSameRow("must_redact", entity)
$table.getEntitiesOfTypeInSameRow("must_redact", $authorOrAddress)
);
});
end
@@ -448,7 +444,6 @@ rule "CBI.12.0: Redact and recommend TableCell with header 'Author' or 'Author(s
TableCell(!header, containsAnyString("Yes", "Y"), $rowWithYes: row) from $table.streamCol($vertebrateCol).toList()
$authorCell: TableCell(row == $rowWithYes) from $table.streamCol($authorCol).toList()
then
entityCreationService.bySemanticNode($authorCell, "CBI_author", EntityType.ENTITY)
.ifPresent(authorEntity -> {
authorEntity.redact("CBI.12.0", "Redacted because it's row belongs to a vertebrate study", "Article 39(e)(3) of Regulation (EC) No 178/2002");
@@ -744,7 +739,7 @@ rule "PII.1.2: Redact typoed Emails with indicator"
when
$section: Section(containsString("@") || containsStringIgnoreCase("mail"))
then
entityCreationService.byRegexIgnoreCase("mail[:\\.\\s]{1,2}([\\w\\/\\-\\{\\(\\. ]{3,20}(@|a|f)\\s?[\\w\\/\\-\\{\\(\\. ]{3,20}(\\. \\w{2,4}\\b|\\.\\B|\\.\\w{1,4}\\b))", "PII", EntityType.ENTITY, $section)
entityCreationService.byRegexIgnoreCase("mail[:\\.\\s]{1,2}([\\w\\/\\-\\{\\(\\. ]{3,20}(@|a|f)\\s?[\\w\\/\\-\\{\\(\\. ]{3,20}(\\. \\w{2,4}\\b|\\.\\B|\\.\\w{1,4}\\b))", "PII", EntityType.ENTITY, 1, $section)
.forEach(emailEntity -> emailEntity.redact("PII.1.2", "Personal information found", "Article 39(e)(3) of Regulation (EC) No 178/2002"));
end
@@ -1155,13 +1150,22 @@ rule "ETC.4.2: Redact dossier dictionary entries"
// Rule unit: ETC.5
rule "ETC.5.0: Ignore dossier_redaction entries if confidentiality is not 'confidential'"
rule "ETC.5.0: Skip dossier_redaction entries if confidentiality is 'confidential'"
when
FileAttribute(label == "Confidentiality", value == "confidential")
$dossierRedaction: TextEntity(type() == "dossier_redaction")
then
$dossierRedaction.skip("ETC.5.0", "Ignore dossier_redaction when confidential");
$dossierRedaction.getIntersectingNodes().forEach(node -> update(node));
end
rule "ETC.5.1: Remove dossier_redaction entries if confidentiality is not 'confidential'"
when
not FileAttribute(label == "Confidentiality", value == "confidential")
$dossierRedaction: TextEntity(type() == "dossier_redaction")
then
$dossierRedaction.ignore("ETC.5.0", "Ignore dossier redactions, when not confidential");
$dossierRedaction.getIntersectingNodes().forEach(node -> update(node));
$dossierRedaction.remove("ETC.5.1", "Remove dossier_redaction when not confidential");
retract($dossierRedaction);
end
@@ -1416,7 +1420,7 @@ rule "MAN.3.2: Apply image recategorization"
rule "MAN.3.3: Apply recategorization entities by default"
salience 128
when
$entity: IEntity(getManualOverwrite().getRecategorized().orElse(false))
$entity: TextEntity(getManualOverwrite().getRecategorized().orElse(false), !dictionary.isHint(type()))
then
$entity.apply("MAN.3.3", "Recategorized entities are applied by default.", $entity.legalBasis());
end
@@ -1453,7 +1457,7 @@ rule "X.0.0: Remove Entity contained by Entity of same type"
salience 65
when
$larger: TextEntity($type: type(), $entityType: entityType, active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges(), active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges())
then
$contained.remove("X.0.0", "remove Entity contained by Entity of same type");
retract($contained);
@@ -1481,7 +1485,7 @@ rule "X.2.0: Remove Entity of type ENTITY when contained by FALSE_POSITIVE"
salience 64
when
$falsePositive: TextEntity($type: type(), entityType == EntityType.FALSE_POSITIVE, active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges(), active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges())
then
$entity.getIntersectingNodes().forEach(node -> update(node));
$entity.remove("X.2.0", "remove Entity of type ENTITY when contained by FALSE_POSITIVE");
@@ -1494,7 +1498,7 @@ rule "X.3.0: Remove Entity of type RECOMMENDATION when contained by FALSE_RECOMM
salience 64
when
$falseRecommendation: TextEntity($type: type(), entityType == EntityType.FALSE_RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.3.0", "remove Entity of type RECOMMENDATION when contained by FALSE_RECOMMENDATION");
retract($recommendation);
@@ -1506,7 +1510,7 @@ rule "X.4.0: Remove Entity of type RECOMMENDATION when text range equals ENTITY
salience 256
when
$entity: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$entity.addEngines($recommendation.getEngines());
$recommendation.remove("X.4.0", "remove Entity of type RECOMMENDATION when text range equals ENTITY with same type");
@@ -1519,7 +1523,7 @@ rule "X.5.0: Remove Entity of type RECOMMENDATION when intersected by ENTITY"
salience 256
when
$entity: TextEntity((entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.0", "remove Entity of type RECOMMENDATION when intersected by ENTITY");
retract($recommendation);
@@ -1529,7 +1533,7 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
salience 256
when
$entity: TextEntity($type: type(), entityType == EntityType.RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.1", "remove Entity of type RECOMMENDATION when contained by RECOMMENDATION");
retract($recommendation);
@@ -1537,26 +1541,70 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
// Rule unit: X.6
rule "X.6.0: Remove Entity of lower rank, when contained by by entity of type ENTITY"
rule "X.6.0: Remove Entity of lower rank, when contained by entity of type ENTITY or HINT"
salience 32
when
$higherRank: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges(), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges())
then
$lowerRank.getIntersectingNodes().forEach(node -> update(node));
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY");
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY or HINT");
retract($lowerRank);
end
rule "X.6.1: remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity"
rule "X.6.1: remove Entity, when contained in another entity of type ENTITY or HINT with larger text range"
salience 32
when
$higherRank: TextEntity($type: type(), $value: value, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active(), !hasManualChanges())
$lowerRank: TextEntity(intersects($higherRank), type() != $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), active(), $lowerRank.getValue().length() > $value.length())
$outer: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$inner: TextEntity(containedBy($outer), type() != $type, $outer.getTextRange().length > getTextRange().length(), !hasManualChanges())
then
$higherRank.getIntersectingNodes().forEach(node -> update(node));
$higherRank.remove("X.6.1", "remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity");
retract($higherRank);
$inner.getIntersectingNodes().forEach(node -> update(node));
$inner.remove("X.6.1", "remove Entity, when contained in another entity of type ENTITY or HINT with larger text range");
retract($inner);
end
// Rule unit: X.8
rule "X.8.0: Remove Entity when text range and type equals to imported Entity"
salience 257
when
$entity: TextEntity($type: type(), engines contains Engine.IMPORTED, active())
$other: TextEntity(getTextRange().equals($entity.getTextRange()), this != $entity, type() == $type, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.0", "remove Entity when text range and type equals to imported Entity");
$entity.addEngines($other.getEngines());
retract($other);
end
rule "X.8.1: Remove Entity when intersected by imported Entity"
salience 256
when
$entity: TextEntity(engines contains Engine.IMPORTED, active())
$other: TextEntity(intersects($entity), this != $entity, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.1", "remove Entity when intersected by imported Entity");
retract($other);
end
// Rule unit: X.9
rule "X.9.0: Merge mostly contained signatures"
when
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI)
$signature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.ALGORITHM, mostlyContains($aiSignature, 0.8))
then
$aiSignature.remove("X.9.0", "removed because already contained by alogrithm signature");
$signature.addEngine(LayoutEngine.AI);
end
// Rule unit: X.10
rule "X.10.0: remove false positives of ai"
when
$anyImage: Image(engines contains LayoutEngine.ALGORITHM)
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI, !mostlyContainedBy($anyImage, 0.8))
then
$aiSignature.remove("X.10.0", "Removed because false positive");
end
@@ -54,6 +54,8 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
global Document document
global EntityCreationService entityCreationService
global ManualChangesApplicationService manualChangesApplicationService
@@ -1276,7 +1278,7 @@ rule "MAN.3.2: Apply image recategorization"
rule "MAN.3.3: Apply recategorization entities by default"
salience 128
when
$entity: IEntity(getManualOverwrite().getRecategorized().orElse(false))
$entity: TextEntity(getManualOverwrite().getRecategorized().orElse(false), !dictionary.isHint(type()))
then
$entity.apply("MAN.3.3", "Recategorized entities are applied by default.", $entity.legalBasis());
end
@@ -1313,7 +1315,7 @@ rule "X.0.0: Remove Entity contained by Entity of same type"
salience 65
when
$larger: TextEntity($type: type(), $entityType: entityType, active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges(), active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges())
then
$contained.remove("X.0.0", "remove Entity contained by Entity of same type");
retract($contained);
@@ -1325,7 +1327,7 @@ rule "X.2.0: Remove Entity of type ENTITY when contained by FALSE_POSITIVE"
salience 64
when
$falsePositive: TextEntity($type: type(), entityType == EntityType.FALSE_POSITIVE, active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges(), active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges())
then
$entity.getIntersectingNodes().forEach(node -> update(node));
$entity.remove("X.2.0", "remove Entity of type ENTITY when contained by FALSE_POSITIVE");
@@ -1338,7 +1340,7 @@ rule "X.3.0: Remove Entity of type RECOMMENDATION when contained by FALSE_RECOMM
salience 64
when
$falseRecommendation: TextEntity($type: type(), entityType == EntityType.FALSE_RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.3.0", "remove Entity of type RECOMMENDATION when contained by FALSE_RECOMMENDATION");
retract($recommendation);
@@ -1350,7 +1352,7 @@ rule "X.4.0: Remove Entity of type RECOMMENDATION when text range equals ENTITY
salience 256
when
$entity: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$entity.addEngines($recommendation.getEngines());
$recommendation.remove("X.4.0", "remove Entity of type RECOMMENDATION when text range equals ENTITY with same type");
@@ -1363,7 +1365,7 @@ rule "X.5.0: Remove Entity of type RECOMMENDATION when intersected by ENTITY"
salience 256
when
$entity: TextEntity((entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.0", "remove Entity of type RECOMMENDATION when intersected by ENTITY");
retract($recommendation);
@@ -1373,7 +1375,7 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
salience 256
when
$entity: TextEntity($type: type(), entityType == EntityType.RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.1", "remove Entity of type RECOMMENDATION when contained by RECOMMENDATION");
retract($recommendation);
@@ -1391,6 +1393,50 @@ rule "X.7.0: Remove all images"
end
// Rule unit: X.8
rule "X.8.0: Remove Entity when text range and type equals to imported Entity"
salience 257
when
$entity: TextEntity($type: type(), engines contains Engine.IMPORTED, active())
$other: TextEntity(getTextRange().equals($entity.getTextRange()), this != $entity, type() == $type, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.0", "remove Entity when text range and type equals to imported Entity");
$entity.addEngines($other.getEngines());
retract($other);
end
rule "X.8.1: Remove Entity when intersected by imported Entity"
salience 256
when
$entity: TextEntity(engines contains Engine.IMPORTED, active())
$other: TextEntity(intersects($entity), this != $entity, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.1", "remove Entity when intersected by imported Entity");
retract($other);
end
// Rule unit: X.9
rule "X.9.0: Merge mostly contained signatures"
when
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI)
$signature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.ALGORITHM, mostlyContains($aiSignature, 0.8))
then
$aiSignature.remove("X.9.0", "removed because already contained by alogrithm signature");
$signature.addEngine(LayoutEngine.AI);
end
// Rule unit: X.10
rule "X.10.0: remove false positives of ai"
when
$anyImage: Image(engines contains LayoutEngine.ALGORITHM)
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI, !mostlyContainedBy($anyImage, 0.8))
then
$aiSignature.remove("X.10.0", "Removed because false positive");
end
//------------------------------------ File attributes rules ------------------------------------
// Rule unit: FA.1
@@ -54,6 +54,8 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
global Document document
global EntityCreationService entityCreationService
global ManualChangesApplicationService manualChangesApplicationService
@@ -188,7 +190,7 @@ rule "MAN.3.2: Apply image recategorization"
rule "MAN.3.3: Apply recategorization entities by default"
salience 128
when
$entity: IEntity(getManualOverwrite().getRecategorized().orElse(false))
$entity: TextEntity(getManualOverwrite().getRecategorized().orElse(false), !dictionary.isHint(type()))
then
$entity.apply("MAN.3.3", "Recategorized entities are applied by default.", $entity.legalBasis());
end
@@ -225,13 +227,57 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
salience 256
when
$entity: TextEntity($type: type(), entityType == EntityType.RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.1", "remove Entity of type RECOMMENDATION when contained by RECOMMENDATION");
retract($recommendation);
end
// Rule unit: X.8
rule "X.8.0: Remove Entity when text range and type equals to imported Entity"
salience 257
when
$entity: TextEntity($type: type(), engines contains Engine.IMPORTED, active())
$other: TextEntity(getTextRange().equals($entity.getTextRange()), this != $entity, type() == $type, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.0", "remove Entity when text range and type equals to imported Entity");
$entity.addEngines($other.getEngines());
retract($other);
end
rule "X.8.1: Remove Entity when intersected by imported Entity"
salience 256
when
$entity: TextEntity(engines contains Engine.IMPORTED, active())
$other: TextEntity(intersects($entity), this != $entity, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.1", "remove Entity when intersected by imported Entity");
retract($other);
end
// Rule unit: X.9
rule "X.9.0: Merge mostly contained signatures"
when
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI)
$signature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.ALGORITHM, mostlyContains($aiSignature, 0.8))
then
$aiSignature.remove("X.9.0", "removed because already contained by alogrithm signature");
$signature.addEngine(LayoutEngine.AI);
end
// Rule unit: X.10
rule "X.10.0: remove false positives of ai"
when
$anyImage: Image(engines contains LayoutEngine.ALGORITHM)
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI, !mostlyContainedBy($anyImage, 0.8))
then
$aiSignature.remove("X.10.0", "Removed because false positive");
end
//------------------------------------ Local dictionary search rules ------------------------------------
// Rule unit: LDS.0
@@ -54,6 +54,8 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
global Document document
global EntityCreationService entityCreationService
global ManualChangesApplicationService manualChangesApplicationService
@@ -100,18 +102,17 @@ rule "CBI.3.0: Redacted because Section contains a vertebrate"
rule "CBI.3.1: Redacted because table row contains a vertebrate"
when
$table: Table(hasEntitiesOfType("vertebrate"), (hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("vertebrate"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
$cellsWithvertebrate: TableCell() from $table.streamTableCellsWhichContainType("vertebrate").toList()
$tableCell: TableCell(row == $cellsWithvertebrate.row) from $table.streamTableCells().toList()
$authorOrAddress: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("vertebrate"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.applyWithReferences(
$authorOrAddress.applyWithReferences(
"CBI.3.1",
"Vertebrate found",
"Reg (EC) No 1107/2009 Art. 63 (2g)",
$table.getEntitiesOfTypeInSameRow("vertebrate", entity)
$table.getEntitiesOfTypeInSameRow("vertebrate", $authorOrAddress)
);
});
end
rule "CBI.3.2: Do not redact because Section does not contain a vertebrate"
@@ -150,23 +151,21 @@ rule "CBI.4.0: Do not redact Names and Addresses if no_redaction_indicator is fo
});
end
rule "CBI.4.1: Do not redact Names and Addresses if no_redaction_indicator is found in table row"
rule "CBI.4.1: Redacted because table row contains a vertebrate"
when
$table: Table(hasEntitiesOfType("no_redaction_indicator"),
hasEntitiesOfType("vertebrate"),
(hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("no_redaction_indicator"), hasEntitiesOfType("vertebrate"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
TableCell($row: row) from $table.streamTableCellsWhichContainType("vertebrate").toList()
TableCell(row == $row) from $table.streamTableCellsWhichContainType("no_redaction_indicator").toList()
$tableCell: TableCell(row == $row) from $table.streamTableCells().toList()
$authorOrAddress: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("vertebrate", "no-redaction_indicator"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.skipWithReferences(
$authorOrAddress.skipWithReferences(
"CBI.4.1",
"Vertebrate but a no redaction indicator found",
Stream.concat(
$table.getEntitiesOfTypeInSameRow("vertebrate", entity).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", entity).stream()).toList()
$table.getEntitiesOfTypeInSameRow("vertebrate", $authorOrAddress).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", $authorOrAddress).stream()).toList()
);
});
end
@@ -193,22 +192,20 @@ rule "CBI.5.0: Redact Names and Addresses if no_redaction_indicator but also red
rule "CBI.5.1: Redact Names and Addresses if no_redaction_indicator but also redaction_indicator is found in table row"
when
$table: Table(hasEntitiesOfType("no_redaction_indicator"),
hasEntitiesOfType("redaction_indicator"),
(hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("no_redaction_indicator"), hasEntitiesOfType("redaction_indicator"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
TableCell($row: row) from $table.streamTableCellsWhichContainType("redaction_indicator").toList()
TableCell(row == $row) from $table.streamTableCellsWhichContainType("no_redaction_indicator").toList()
$tableCell: TableCell(row == $row) from $table.streamTableCells().toList()
$entity: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("redaction_indicator", "no_redaction_indicator"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.applyWithReferences(
$entity.applyWithReferences(
"CBI.5.1",
"no_redaction_indicator but also redaction_indicator found",
"Reg (EC) No 1107/2009 Art. 63 (2g)",
Stream.concat(
$table.getEntitiesOfTypeInSameRow("vertebrate", entity).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", entity).stream()).toList()
$table.getEntitiesOfTypeInSameRow("redaction_indicator", $entity).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", $entity).stream()).toList()
);
});
end
@@ -230,18 +227,17 @@ rule "CBI.8.0: Redacted because Section contains must_redact entity"
rule "CBI.8.1: Redacted because table row contains must_redact entity"
when
$table: Table(hasEntitiesOfType("must_redact"), (hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("must_redact"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
$cellsWithMustRedact: TableCell() from $table.streamTableCellsWhichContainType("must_redact").toList()
$tableCell: TableCell(row == $cellsWithMustRedact.row) from $table.streamTableCells().toList()
$authorOrAddress: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("must_redact"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.applyWithReferences(
$authorOrAddress.applyWithReferences(
"CBI.8.1",
"must_redact entity found",
"Must_redact found",
"Reg (EC) No 1107/2009 Art. 63 (2g)",
$table.getEntitiesOfTypeInSameRow("must_redact", entity)
$table.getEntitiesOfTypeInSameRow("must_redact", $authorOrAddress)
);
});
end
@@ -295,7 +291,6 @@ rule "CBI.12.0: Redact and recommend TableCell with header 'Author' or 'Author(s
TableCell(!header, containsAnyString("Yes", "Y"), $rowWithYes: row) from $table.streamCol($vertebrateCol).toList()
$authorCell: TableCell(row == $rowWithYes) from $table.streamCol($authorCol).toList()
then
entityCreationService.bySemanticNode($authorCell, "CBI_author", EntityType.ENTITY)
.ifPresent(authorEntity -> {
authorEntity.redact("CBI.12.0", "Redacted because it's row belongs to a vertebrate study", "Article 39(e)(3) of Regulation (EC) No 178/2002");
@@ -807,13 +802,22 @@ rule "ETC.4.0: Redact dossier dictionary entries"
// Rule unit: ETC.5
rule "ETC.5.0: Ignore dossier_redaction entries if confidentiality is not 'confidential'"
rule "ETC.5.0: Skip dossier_redaction entries if confidentiality is 'confidential'"
when
FileAttribute(label == "Confidentiality", value == "confidential")
$dossierRedaction: TextEntity(type() == "dossier_redaction")
then
$dossierRedaction.skip("ETC.5.0", "Ignore dossier_redaction when confidential");
$dossierRedaction.getIntersectingNodes().forEach(node -> update(node));
end
rule "ETC.5.1: Remove dossier_redaction entries if confidentiality is not 'confidential'"
when
not FileAttribute(label == "Confidentiality", value == "confidential")
$dossierRedaction: TextEntity(type() == "dossier_redaction")
then
$dossierRedaction.ignore("ETC.5.0", "Ignore dossier redactions, when not confidential");
$dossierRedaction.getIntersectingNodes().forEach(node -> update(node));
$dossierRedaction.remove("ETC.5.1", "Remove dossier_redaction when not confidential");
retract($dossierRedaction);
end
@@ -1006,7 +1010,7 @@ rule "MAN.3.2: Apply image recategorization"
rule "MAN.3.3: Apply recategorization entities by default"
salience 128
when
$entity: IEntity(getManualOverwrite().getRecategorized().orElse(false))
$entity: TextEntity(getManualOverwrite().getRecategorized().orElse(false), !dictionary.isHint(type()))
then
$entity.apply("MAN.3.3", "Recategorized entities are applied by default.", $entity.legalBasis());
end
@@ -1043,7 +1047,7 @@ rule "X.0.0: Remove Entity contained by Entity of same type"
salience 65
when
$larger: TextEntity($type: type(), $entityType: entityType, active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges(), active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges())
then
$contained.remove("X.0.0", "remove Entity contained by Entity of same type");
retract($contained);
@@ -1071,7 +1075,7 @@ rule "X.2.0: Remove Entity of type ENTITY when contained by FALSE_POSITIVE"
salience 64
when
$falsePositive: TextEntity($type: type(), entityType == EntityType.FALSE_POSITIVE, active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges(), active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges())
then
$entity.getIntersectingNodes().forEach(node -> update(node));
$entity.remove("X.2.0", "remove Entity of type ENTITY when contained by FALSE_POSITIVE");
@@ -1084,7 +1088,7 @@ rule "X.3.0: Remove Entity of type RECOMMENDATION when contained by FALSE_RECOMM
salience 64
when
$falseRecommendation: TextEntity($type: type(), entityType == EntityType.FALSE_RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.3.0", "remove Entity of type RECOMMENDATION when contained by FALSE_RECOMMENDATION");
retract($recommendation);
@@ -1096,7 +1100,7 @@ rule "X.4.0: Remove Entity of type RECOMMENDATION when text range equals ENTITY
salience 256
when
$entity: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$entity.addEngines($recommendation.getEngines());
$recommendation.remove("X.4.0", "remove Entity of type RECOMMENDATION when text range equals ENTITY with same type");
@@ -1109,7 +1113,7 @@ rule "X.5.0: Remove Entity of type RECOMMENDATION when intersected by ENTITY"
salience 256
when
$entity: TextEntity((entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.0", "remove Entity of type RECOMMENDATION when intersected by ENTITY");
retract($recommendation);
@@ -1119,7 +1123,7 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
salience 256
when
$entity: TextEntity($type: type(), entityType == EntityType.RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.1", "remove Entity of type RECOMMENDATION when contained by RECOMMENDATION");
retract($recommendation);
@@ -1127,26 +1131,70 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
// Rule unit: X.6
rule "X.6.0: Remove Entity of lower rank, when contained by by entity of type ENTITY"
rule "X.6.0: Remove Entity of lower rank, when contained by entity of type ENTITY or HINT"
salience 32
when
$higherRank: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges(), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges())
then
$lowerRank.getIntersectingNodes().forEach(node -> update(node));
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY");
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY or HINT");
retract($lowerRank);
end
rule "X.6.1: remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity"
rule "X.6.1: remove Entity, when contained in another entity of type ENTITY or HINT with larger text range"
salience 32
when
$higherRank: TextEntity($type: type(), $value: value, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active(), !hasManualChanges())
$lowerRank: TextEntity(intersects($higherRank), type() != $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), active(), $lowerRank.getValue().length() > $value.length())
$outer: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$inner: TextEntity(containedBy($outer), type() != $type, $outer.getTextRange().length > getTextRange().length(), !hasManualChanges())
then
$higherRank.getIntersectingNodes().forEach(node -> update(node));
$higherRank.remove("X.6.1", "remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity");
retract($higherRank);
$inner.getIntersectingNodes().forEach(node -> update(node));
$inner.remove("X.6.1", "remove Entity, when contained in another entity of type ENTITY or HINT with larger text range");
retract($inner);
end
// Rule unit: X.8
rule "X.8.0: Remove Entity when text range and type equals to imported Entity"
salience 257
when
$entity: TextEntity($type: type(), engines contains Engine.IMPORTED, active())
$other: TextEntity(getTextRange().equals($entity.getTextRange()), this != $entity, type() == $type, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.0", "remove Entity when text range and type equals to imported Entity");
$entity.addEngines($other.getEngines());
retract($other);
end
rule "X.8.1: Remove Entity when intersected by imported Entity"
salience 256
when
$entity: TextEntity(engines contains Engine.IMPORTED, active())
$other: TextEntity(intersects($entity), this != $entity, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.1", "remove Entity when intersected by imported Entity");
retract($other);
end
// Rule unit: X.9
rule "X.9.0: Merge mostly contained signatures"
when
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI)
$signature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.ALGORITHM, mostlyContains($aiSignature, 0.8))
then
$aiSignature.remove("X.9.0", "removed because already contained by alogrithm signature");
$signature.addEngine(LayoutEngine.AI);
end
// Rule unit: X.10
rule "X.10.0: remove false positives of ai"
when
$anyImage: Image(engines contains LayoutEngine.ALGORITHM)
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI, !mostlyContainedBy($anyImage, 0.8))
then
$aiSignature.remove("X.10.0", "Removed because false positive");
end
@@ -54,6 +54,8 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
global Document document
global EntityCreationService entityCreationService
global ManualChangesApplicationService manualChangesApplicationService
@@ -212,7 +214,7 @@ rule "MAN.3.1: Apply entity recategorization of same type"
rule "MAN.3.3: Apply recategorization entities by default"
salience 128
when
$entity: IEntity(getManualOverwrite().getRecategorized().orElse(false))
$entity: TextEntity(getManualOverwrite().getRecategorized().orElse(false), !dictionary.isHint(type()))
then
$entity.apply("MAN.3.3", "Recategorized entities are applied by default.", $entity.legalBasis());
end
@@ -249,7 +251,7 @@ rule "X.0.0: Remove Entity contained by Entity of same type"
salience 65
when
$larger: TextEntity($type: type(), $entityType: entityType, active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges(), active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges())
then
$contained.remove("X.0.0", "remove Entity contained by Entity of same type");
retract($contained);
@@ -277,7 +279,7 @@ rule "X.2.0: Remove Entity of type ENTITY when contained by FALSE_POSITIVE"
salience 64
when
$falsePositive: TextEntity($type: type(), entityType == EntityType.FALSE_POSITIVE, active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges(), active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges())
then
$entity.getIntersectingNodes().forEach(node -> update(node));
$entity.remove("X.2.0", "remove Entity of type ENTITY when contained by FALSE_POSITIVE");
@@ -290,7 +292,7 @@ rule "X.3.0: Remove Entity of type RECOMMENDATION when contained by FALSE_RECOMM
salience 64
when
$falseRecommendation: TextEntity($type: type(), entityType == EntityType.FALSE_RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.3.0", "remove Entity of type RECOMMENDATION when contained by FALSE_RECOMMENDATION");
retract($recommendation);
@@ -302,7 +304,7 @@ rule "X.4.0: Remove Entity of type RECOMMENDATION when text range equals ENTITY
salience 256
when
$entity: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$entity.addEngines($recommendation.getEngines());
$recommendation.remove("X.4.0", "remove Entity of type RECOMMENDATION when text range equals ENTITY with same type");
@@ -315,7 +317,7 @@ rule "X.5.0: Remove Entity of type RECOMMENDATION when intersected by ENTITY"
salience 256
when
$entity: TextEntity((entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.0", "remove Entity of type RECOMMENDATION when intersected by ENTITY");
retract($recommendation);
@@ -325,7 +327,7 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
salience 256
when
$entity: TextEntity($type: type(), entityType == EntityType.RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.1", "remove Entity of type RECOMMENDATION when contained by RECOMMENDATION");
retract($recommendation);
@@ -333,26 +335,70 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
// Rule unit: X.6
rule "X.6.0: Remove Entity of lower rank, when contained by by entity of type ENTITY"
rule "X.6.0: Remove Entity of lower rank, when contained by entity of type ENTITY or HINT"
salience 32
when
$higherRank: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges(), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges())
then
$lowerRank.getIntersectingNodes().forEach(node -> update(node));
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY");
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY or HINT");
retract($lowerRank);
end
rule "X.6.1: remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity"
rule "X.6.1: remove Entity, when contained in another entity of type ENTITY or HINT with larger text range"
salience 32
when
$higherRank: TextEntity($type: type(), $value: value, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active(), !hasManualChanges())
$lowerRank: TextEntity(intersects($higherRank), type() != $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), active(), $lowerRank.getValue().length() > $value.length())
$outer: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$inner: TextEntity(containedBy($outer), type() != $type, $outer.getTextRange().length > getTextRange().length(), !hasManualChanges())
then
$higherRank.getIntersectingNodes().forEach(node -> update(node));
$higherRank.remove("X.6.1", "remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity");
retract($higherRank);
$inner.getIntersectingNodes().forEach(node -> update(node));
$inner.remove("X.6.1", "remove Entity, when contained in another entity of type ENTITY or HINT with larger text range");
retract($inner);
end
// Rule unit: X.8
rule "X.8.0: Remove Entity when text range and type equals to imported Entity"
salience 257
when
$entity: TextEntity($type: type(), engines contains Engine.IMPORTED, active())
$other: TextEntity(getTextRange().equals($entity.getTextRange()), this != $entity, type() == $type, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.0", "remove Entity when text range and type equals to imported Entity");
$entity.addEngines($other.getEngines());
retract($other);
end
rule "X.8.1: Remove Entity when intersected by imported Entity"
salience 256
when
$entity: TextEntity(engines contains Engine.IMPORTED, active())
$other: TextEntity(intersects($entity), this != $entity, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.1", "remove Entity when intersected by imported Entity");
retract($other);
end
// Rule unit: X.9
rule "X.9.0: Merge mostly contained signatures"
when
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI)
$signature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.ALGORITHM, mostlyContains($aiSignature, 0.8))
then
$aiSignature.remove("X.9.0", "removed because already contained by alogrithm signature");
$signature.addEngine(LayoutEngine.AI);
end
// Rule unit: X.10
rule "X.10.0: remove false positives of ai"
when
$anyImage: Image(engines contains LayoutEngine.ALGORITHM)
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI, !mostlyContainedBy($anyImage, 0.8))
then
$aiSignature.remove("X.10.0", "Removed because false positive");
end
@@ -54,6 +54,8 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
global Document document
global EntityCreationService entityCreationService
global ManualChangesApplicationService manualChangesApplicationService
@@ -338,7 +340,7 @@ rule "MAN.3.2: Apply image recategorization"
rule "MAN.3.3: Apply recategorization entities by default"
salience 128
when
$entity: IEntity(getManualOverwrite().getRecategorized().orElse(false))
$entity: TextEntity(getManualOverwrite().getRecategorized().orElse(false), !dictionary.isHint(type()))
then
$entity.apply("MAN.3.3", "Recategorized entities are applied by default.", $entity.legalBasis());
end
@@ -375,7 +377,7 @@ rule "X.0.0: Remove Entity contained by Entity of same type"
salience 65
when
$larger: TextEntity($type: type(), $entityType: entityType, active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges(), active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges())
then
$contained.remove("X.0.0", "remove Entity contained by Entity of same type");
retract($contained);
@@ -387,7 +389,7 @@ rule "X.2.0: Remove Entity of type ENTITY when contained by FALSE_POSITIVE"
salience 64
when
$falsePositive: TextEntity($type: type(), entityType == EntityType.FALSE_POSITIVE, active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges(), active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges())
then
$entity.getIntersectingNodes().forEach(node -> update(node));
$entity.remove("X.2.0", "remove Entity of type ENTITY when contained by FALSE_POSITIVE");
@@ -400,7 +402,7 @@ rule "X.3.0: Remove Entity of type RECOMMENDATION when contained by FALSE_RECOMM
salience 64
when
$falseRecommendation: TextEntity($type: type(), entityType == EntityType.FALSE_RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.3.0", "remove Entity of type RECOMMENDATION when contained by FALSE_RECOMMENDATION");
retract($recommendation);
@@ -412,7 +414,7 @@ rule "X.4.0: Remove Entity of type RECOMMENDATION when text range equals ENTITY
salience 256
when
$entity: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$entity.addEngines($recommendation.getEngines());
$recommendation.remove("X.4.0", "remove Entity of type RECOMMENDATION when text range equals ENTITY with same type");
@@ -425,7 +427,7 @@ rule "X.5.0: Remove Entity of type RECOMMENDATION when intersected by ENTITY"
salience 256
when
$entity: TextEntity((entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.0", "remove Entity of type RECOMMENDATION when intersected by ENTITY");
retract($recommendation);
@@ -435,7 +437,7 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
salience 256
when
$entity: TextEntity($type: type(), entityType == EntityType.RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.1", "remove Entity of type RECOMMENDATION when contained by RECOMMENDATION");
retract($recommendation);
@@ -443,26 +445,26 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
// Rule unit: X.6
rule "X.6.0: Remove Entity of lower rank, when contained by by entity of type ENTITY"
rule "X.6.0: Remove Entity of lower rank, when contained by entity of type ENTITY or HINT"
salience 32
when
$higherRank: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges(), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges())
then
$lowerRank.getIntersectingNodes().forEach(node -> update(node));
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY");
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY or HINT");
retract($lowerRank);
end
rule "X.6.1: remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity"
rule "X.6.1: remove Entity, when contained in another entity of type ENTITY or HINT with larger text range"
salience 32
when
$higherRank: TextEntity($type: type(), $value: value, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active(), !hasManualChanges())
$lowerRank: TextEntity(intersects($higherRank), type() != $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), active(), $lowerRank.getValue().length() > $value.length())
$outer: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$inner: TextEntity(containedBy($outer), type() != $type, $outer.getTextRange().length > getTextRange().length(), !hasManualChanges())
then
$higherRank.getIntersectingNodes().forEach(node -> update(node));
$higherRank.remove("X.6.1", "remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity");
retract($higherRank);
$inner.getIntersectingNodes().forEach(node -> update(node));
$inner.remove("X.6.1", "remove Entity, when contained in another entity of type ENTITY or HINT with larger text range");
retract($inner);
end
@@ -477,6 +479,50 @@ rule "X.7.0: Remove all images"
end
// Rule unit: X.8
rule "X.8.0: Remove Entity when text range and type equals to imported Entity"
salience 257
when
$entity: TextEntity($type: type(), engines contains Engine.IMPORTED, active())
$other: TextEntity(getTextRange().equals($entity.getTextRange()), this != $entity, type() == $type, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.0", "remove Entity when text range and type equals to imported Entity");
$entity.addEngines($other.getEngines());
retract($other);
end
rule "X.8.1: Remove Entity when intersected by imported Entity"
salience 256
when
$entity: TextEntity(engines contains Engine.IMPORTED, active())
$other: TextEntity(intersects($entity), this != $entity, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.1", "remove Entity when intersected by imported Entity");
retract($other);
end
// Rule unit: X.9
rule "X.9.0: Merge mostly contained signatures"
when
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI)
$signature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.ALGORITHM, mostlyContains($aiSignature, 0.8))
then
$aiSignature.remove("X.9.0", "removed because already contained by alogrithm signature");
$signature.addEngine(LayoutEngine.AI);
end
// Rule unit: X.10
rule "X.10.0: remove false positives of ai"
when
$anyImage: Image(engines contains LayoutEngine.ALGORITHM)
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI, !mostlyContainedBy($anyImage, 0.8))
then
$aiSignature.remove("X.10.0", "Removed because false positive");
end
//------------------------------------ File attributes rules ------------------------------------
// Rule unit: FA.1
@@ -54,6 +54,8 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
global Document document
global EntityCreationService entityCreationService
global ManualChangesApplicationService manualChangesApplicationService
@@ -238,7 +240,7 @@ rule "MAN.3.2: Apply image recategorization"
rule "MAN.3.3: Apply recategorization entities by default"
salience 128
when
$entity: IEntity(getManualOverwrite().getRecategorized().orElse(false))
$entity: TextEntity(getManualOverwrite().getRecategorized().orElse(false), !dictionary.isHint(type()))
then
$entity.apply("MAN.3.3", "Recategorized entities are applied by default.", $entity.legalBasis());
end
@@ -275,7 +277,7 @@ rule "X.0.0: Remove Entity contained by Entity of same type"
salience 65
when
$larger: TextEntity($type: type(), $entityType: entityType, active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges(), active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges())
then
$contained.remove("X.0.0", "remove Entity contained by Entity of same type");
retract($contained);
@@ -303,7 +305,7 @@ rule "X.2.0: Remove Entity of type ENTITY when contained by FALSE_POSITIVE"
salience 64
when
$falsePositive: TextEntity($type: type(), entityType == EntityType.FALSE_POSITIVE, active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges(), active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges())
then
$entity.getIntersectingNodes().forEach(node -> update(node));
$entity.remove("X.2.0", "remove Entity of type ENTITY when contained by FALSE_POSITIVE");
@@ -316,7 +318,7 @@ rule "X.3.0: Remove Entity of type RECOMMENDATION when contained by FALSE_RECOMM
salience 64
when
$falseRecommendation: TextEntity($type: type(), entityType == EntityType.FALSE_RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.3.0", "remove Entity of type RECOMMENDATION when contained by FALSE_RECOMMENDATION");
retract($recommendation);
@@ -328,7 +330,7 @@ rule "X.4.0: Remove Entity of type RECOMMENDATION when text range equals ENTITY
salience 256
when
$entity: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$entity.addEngines($recommendation.getEngines());
$recommendation.remove("X.4.0", "remove Entity of type RECOMMENDATION when text range equals ENTITY with same type");
@@ -341,7 +343,7 @@ rule "X.5.0: Remove Entity of type RECOMMENDATION when intersected by ENTITY"
salience 256
when
$entity: TextEntity((entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.0", "remove Entity of type RECOMMENDATION when intersected by ENTITY");
retract($recommendation);
@@ -351,7 +353,7 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
salience 256
when
$entity: TextEntity($type: type(), entityType == EntityType.RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.1", "remove Entity of type RECOMMENDATION when contained by RECOMMENDATION");
retract($recommendation);
@@ -359,26 +361,26 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
// Rule unit: X.6
rule "X.6.0: Remove Entity of lower rank, when contained by by entity of type ENTITY"
rule "X.6.0: Remove Entity of lower rank, when contained by entity of type ENTITY or HINT"
salience 32
when
$higherRank: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges(), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges())
then
$lowerRank.getIntersectingNodes().forEach(node -> update(node));
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY");
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY or HINT");
retract($lowerRank);
end
rule "X.6.1: remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity"
rule "X.6.1: remove Entity, when contained in another entity of type ENTITY or HINT with larger text range"
salience 32
when
$higherRank: TextEntity($type: type(), $value: value, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active(), !hasManualChanges())
$lowerRank: TextEntity(intersects($higherRank), type() != $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), active(), $lowerRank.getValue().length() > $value.length())
$outer: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$inner: TextEntity(containedBy($outer), type() != $type, $outer.getTextRange().length > getTextRange().length(), !hasManualChanges())
then
$higherRank.getIntersectingNodes().forEach(node -> update(node));
$higherRank.remove("X.6.1", "remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity");
retract($higherRank);
$inner.getIntersectingNodes().forEach(node -> update(node));
$inner.remove("X.6.1", "remove Entity, when contained in another entity of type ENTITY or HINT with larger text range");
retract($inner);
end
@@ -393,6 +395,50 @@ rule "X.7.0: Remove all images"
end
// Rule unit: X.8
rule "X.8.0: Remove Entity when text range and type equals to imported Entity"
salience 257
when
$entity: TextEntity($type: type(), engines contains Engine.IMPORTED, active())
$other: TextEntity(getTextRange().equals($entity.getTextRange()), this != $entity, type() == $type, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.0", "remove Entity when text range and type equals to imported Entity");
$entity.addEngines($other.getEngines());
retract($other);
end
rule "X.8.1: Remove Entity when intersected by imported Entity"
salience 256
when
$entity: TextEntity(engines contains Engine.IMPORTED, active())
$other: TextEntity(intersects($entity), this != $entity, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.1", "remove Entity when intersected by imported Entity");
retract($other);
end
// Rule unit: X.9
rule "X.9.0: Merge mostly contained signatures"
when
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI)
$signature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.ALGORITHM, mostlyContains($aiSignature, 0.8))
then
$aiSignature.remove("X.9.0", "removed because already contained by alogrithm signature");
$signature.addEngine(LayoutEngine.AI);
end
// Rule unit: X.10
rule "X.10.0: remove false positives of ai"
when
$anyImage: Image(engines contains LayoutEngine.ALGORITHM)
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI, !mostlyContainedBy($anyImage, 0.8))
then
$aiSignature.remove("X.10.0", "Removed because false positive");
end
//------------------------------------ File attributes rules ------------------------------------
// Rule unit: FA.1
@@ -1,491 +0,0 @@
{
"idsToRemove": [
{
"annotationId": "6808af23a9652917b73c1939b481f3e4",
"fileId": "2018ceba2d83a7de510c66c9f636cfbf",
"user": "4f5958e9-6444-4e52-97e4-9a995e54dc6d",
"status": "APPROVED",
"requestDate": "2024-01-26T10:11:06.468874Z",
"processedDate": "2024-01-26T10:11:06.555Z",
"softDeletedTime": null,
"removeFromDictionary": false,
"approved": true
},
{
"annotationId": "5316fff0ec9ae3f2773378f3cc833079",
"fileId": "2018ceba2d83a7de510c66c9f636cfbf",
"user": "4f5958e9-6444-4e52-97e4-9a995e54dc6d",
"status": "APPROVED",
"requestDate": "2024-01-26T10:09:16.092673Z",
"processedDate": "2024-01-26T10:09:16.172Z",
"softDeletedTime": null,
"removeFromDictionary": false,
"approved": true
},
{
"annotationId": "01fcfb3581723a4d164b4e5ed9e7db90",
"fileId": "2018ceba2d83a7de510c66c9f636cfbf",
"user": "4f5958e9-6444-4e52-97e4-9a995e54dc6d",
"status": "APPROVED",
"requestDate": "2024-01-26T10:09:05.824116Z",
"processedDate": "2024-01-26T10:09:05.885Z",
"softDeletedTime": null,
"removeFromDictionary": false,
"approved": true
},
{
"annotationId": "ad5c82acae51a8af70c9141e1ae4efde",
"fileId": "2018ceba2d83a7de510c66c9f636cfbf",
"user": "4f5958e9-6444-4e52-97e4-9a995e54dc6d",
"status": "APPROVED",
"requestDate": "2024-01-26T10:09:01.121129Z",
"processedDate": "2024-01-26T10:09:01.178Z",
"softDeletedTime": null,
"removeFromDictionary": false,
"approved": true
},
{
"annotationId": "1ec000364ca48d676af7e33be13685e4",
"fileId": "2018ceba2d83a7de510c66c9f636cfbf",
"user": "4f5958e9-6444-4e52-97e4-9a995e54dc6d",
"status": "APPROVED",
"requestDate": "2024-01-26T10:10:49.38646Z",
"processedDate": "2024-01-26T10:10:49.429Z",
"softDeletedTime": null,
"removeFromDictionary": false,
"approved": true
}
],
"entriesToAdd": [
{
"annotationId": "664d4f36dfb9549d1ba11d70c63274e1",
"fileId": "2018ceba2d83a7de510c66c9f636cfbf",
"user": "4f5958e9-6444-4e52-97e4-9a995e54dc6d",
"status": "APPROVED",
"requestDate": "2024-01-26T10:08:20.832Z",
"processedDate": "2024-01-26T10:08:20.832Z",
"softDeletedTime": null,
"type": "manual",
"value": "CBI.0.1",
"reason": "personal data (names and addresses) of individuals involved in testing on vertebrate studies or in obtaining toxicological information",
"legalBasis": "Article 39(e)(2) of Regulation (EC) No 178/2002",
"section": null,
"rectangle": false,
"addToDictionary": false,
"addToDossierDictionary": false,
"positions": [
{
"topLeftX": 216.38,
"topLeftY": 597.27,
"width": 31.09,
"height": 12.83,
"page": 1
}
],
"textBefore": null,
"textAfter": null,
"sourceId": null,
"approved": true
},
{
"annotationId": "e3d199546dd63db9746adbe0f71a9526",
"fileId": "2018ceba2d83a7de510c66c9f636cfbf",
"user": "4f5958e9-6444-4e52-97e4-9a995e54dc6d",
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}
],
"textBefore": null,
"textAfter": null,
"sourceId": null,
"dictionaryEntryType": null,
"annotationId": "2e0b1dd10a032ce27437b5b404a4d561",
"fileId": "56595118999b5bf98e47c1c918ada128",
"user": "2cb10c0f-e6e9-42de-a4ec-efb3fac5ef61",
"requestDate": "2024-02-09T14:00:16.794Z",
"processedDate": "2024-02-09T14:00:16.795Z",
"softDeletedTime": null,
"approved": true,
"status": "APPROVED"
},
{
"type": "PII",
"value": "Xinyi Y. Tao Possible incidents",
"reason": "False Positive",
"legalBasis": null,
"section": null,
"rectangle": false,
"addToDictionary": true,
"addToDossierDictionary": false,
"positions": [
{
"topLeft": {
"x": 56.8,
"y": 568.84204
},
"width": 60.575993,
"height": -12.641998,
"page": 6,
"topLeftX": 56.8,
"topLeftY": 568.84204
}
],
"textBefore": null,
"textAfter": null,
"sourceId": "3fcff2c472c4cce852815de9cb17a50d",
"dictionaryEntryType": "FALSE_POSITIVE",
"annotationId": "1abcd854c21c305d357677346d1fc3e2",
"fileId": "56595118999b5bf98e47c1c918ada128",
"user": "2cb10c0f-e6e9-42de-a4ec-efb3fac5ef61",
"requestDate": "2024-02-09T14:01:28.622Z",
"processedDate": "2024-02-09T14:01:29.449Z",
"softDeletedTime": null,
"approved": true,
"status": "APPROVED"
},
{
"type": "manual",
"value": "non-readable content",
"reason": "personal data (names and addresses) of individuals involved in testing on vertebrate studies or in obtaining toxicological information",
"legalBasis": "Article 39(e)(2) of Regulation (EC) No 178/2002",
"section": null,
"rectangle": true,
"addToDictionary": false,
"addToDossierDictionary": false,
"positions": [
{
"topLeft": {
"x": 346.08,
"y": 610.87
},
"width": 128.31,
"height": 109.97,
"page": 1,
"topLeftX": 346.08,
"topLeftY": 610.87
}
],
"textBefore": null,
"textAfter": null,
"sourceId": null,
"dictionaryEntryType": null,
"annotationId": "562ef1c464f3739c79fa9cedb9649658",
"fileId": "56595118999b5bf98e47c1c918ada128",
"user": "2cb10c0f-e6e9-42de-a4ec-efb3fac5ef61",
"requestDate": "2024-02-09T14:00:00.762Z",
"processedDate": "2024-02-09T14:00:00.762Z",
"softDeletedTime": null,
"approved": true,
"status": "APPROVED"
}
],
"forceRedactions": [
{
"legalBasis": "Article 39(e)(2) of Regulation (EC) No 178/2002",
"annotationId": "9b94e089cbc76a4eee06fa358d268015",
"fileId": "56595118999b5bf98e47c1c918ada128",
"user": "2cb10c0f-e6e9-42de-a4ec-efb3fac5ef61",
"requestDate": "2024-02-09T14:02:31.479111Z",
"processedDate": "2024-02-09T14:02:32.092Z",
"softDeletedTime": null,
"approved": true,
"status": "APPROVED"
},
{
"legalBasis": "Article 39(e)(2) of Regulation (EC) No 178/2002",
"annotationId": "81dea577c7e615375e2a7bd011ad1a6b",
"fileId": "56595118999b5bf98e47c1c918ada128",
"user": "2cb10c0f-e6e9-42de-a4ec-efb3fac5ef61",
"requestDate": "2024-02-09T14:03:59.774394Z",
"processedDate": "2024-02-09T14:04:00.373Z",
"softDeletedTime": null,
"approved": true,
"status": "APPROVED"
},
{
"legalBasis": "Article 39(e)(2) of Regulation (EC) No 178/2002",
"annotationId": "0c0164dfea2be886475482930b403de5",
"fileId": "56595118999b5bf98e47c1c918ada128",
"user": "2cb10c0f-e6e9-42de-a4ec-efb3fac5ef61",
"requestDate": "2024-02-09T14:02:14.953642Z",
"processedDate": "2024-02-09T14:02:15.58Z",
"softDeletedTime": null,
"approved": true,
"status": "APPROVED"
}
],
"recategorizations": [
{
"type": "formula",
"annotationId": "c6df2cf8cca12cad76fa89f5ee0b3214",
"fileId": "56595118999b5bf98e47c1c918ada128",
"user": "2cb10c0f-e6e9-42de-a4ec-efb3fac5ef61",
"requestDate": "2024-02-09T14:04:06.892584Z",
"processedDate": "2024-02-09T14:04:07.574Z",
"softDeletedTime": null,
"approved": true,
"status": "APPROVED"
}
],
"legalBasisChanges": [],
"resizeRedactions": [
{
"value": "for this project are library@outlook.com",
"positions": [
{
"topLeft": {
"x": 248.632,
"y": 328.464
},
"width": 194.58,
"height": 15.408,
"page": 6,
"topLeftX": 248.632,
"topLeftY": 328.464
}
],
"textBefore": null,
"textAfter": null,
"updateDictionary": false,
"addToAllDossiers": false,
"annotationId": "f2ef0bb904c4e055ce1963d635b41789",
"fileId": "56595118999b5bf98e47c1c918ada128",
"user": "2cb10c0f-e6e9-42de-a4ec-efb3fac5ef61",
"requestDate": "2024-02-09T14:01:49.857167Z",
"processedDate": "2024-02-09T14:01:49.857Z",
"softDeletedTime": null,
"approved": true,
"status": "APPROVED"
},
{
"value": "Alfred",
"positions": [
{
"topLeft": {
"x": 80.788,
"y": 568.364
},
"width": 31.284,
"height": 15.408,
"page": 6,
"topLeftX": 80.788,
"topLeftY": 568.364
}
],
"textBefore": null,
"textAfter": null,
"updateDictionary": false,
"addToAllDossiers": false,
"annotationId": "d251f8afaa84d0f0c939df9ca0eb1b88",
"fileId": "56595118999b5bf98e47c1c918ada128",
"user": "2cb10c0f-e6e9-42de-a4ec-efb3fac5ef61",
"requestDate": "2024-02-09T14:01:21.749389Z",
"processedDate": "2024-02-09T14:01:21.749Z",
"softDeletedTime": null,
"approved": true,
"status": "APPROVED"
},
{
"value": "Image",
"positions": [
{
"topLeft": {
"x": 287,
"y": 613
},
"width": 278.86,
"height": 128.24,
"page": 14,
"topLeftX": 287,
"topLeftY": 613
}
],
"textBefore": null,
"textAfter": null,
"updateDictionary": false,
"addToAllDossiers": false,
"annotationId": "1d7c699be6cfa57e36d26add7f1fd0c5",
"fileId": "56595118999b5bf98e47c1c918ada128",
"user": "2cb10c0f-e6e9-42de-a4ec-efb3fac5ef61",
"requestDate": "2024-02-09T14:03:51.725296Z",
"processedDate": "2024-02-09T14:03:51.725Z",
"softDeletedTime": null,
"approved": true,
"status": "APPROVED"
}
]
}
@@ -0,0 +1,68 @@
{
"mappings": [
{
"oldId": "63a758ca88b0e0a6da546b1a8ece7e39",
"newId": "0c0164dfea2be886475482930b403de5"
},
{
"oldId": "01fcfb3581723a4d164b4e5ed9e7db90",
"newId": "5c0ee1942517fa0f8b7862eeb720a7fe"
},
{
"oldId": "ad5c82acae51a8af70c9141e1ae4efde",
"newId": "c9c3283baf73e327a8ddbdd4d603aad5"
},
{
"oldId": "5316fff0ec9ae3f2773378f3cc833079",
"newId": "aed17872b01a30e019978a99fb1b3c69"
},
{
"oldId": "af762b495f33a941dc94155ed7db9fa7",
"newId": "9b94e089cbc76a4eee06fa358d268015"
},
{
"oldId": "c2cc46b2fd7b3a68639ad12f9ae4c70d",
"newId": "c4587ec065c8e81ad53c34417b8ef866"
},
{
"oldId": "1ec000364ca48d676af7e33be13685e4",
"newId": "234bfcab1a40c5346191a0da99e99e7c"
},
{
"oldId": "90129d370d60b07d8cb060400338255e",
"newId": "d251f8afaa84d0f0c939df9ca0eb1b88"
},
{
"oldId": "30cb40dc6f495193f1b47d0d557fd682",
"newId": "f2ef0bb904c4e055ce1963d635b41789"
},
{
"oldId": "a9eb84b047ecc5f11d1fe835a4c814ad",
"newId": "2e0b1dd10a032ce27437b5b404a4d561"
},
{
"oldId": "fe41fc0f9f5f1e90a2df6eda2f1ba88f",
"newId": "cb27dd265a1c09418b55317c68be6c12"
},
{
"oldId": "52e0c82360238d1a2d4e7023550f5c3c",
"newId": "7ff0836d041a05a5e7165c0712d85b61"
},
{
"oldId": "6808af23a9652917b73c1939b481f3e4",
"newId": "657b681db1be8118ac305b40758effb8"
},
{
"oldId": "3ed0487b61fdb556c8982450aa39a8db",
"newId": "1d7c699be6cfa57e36d26add7f1fd0c5"
},
{
"oldId": "44f684045879e7a6decd34baaae0930f",
"newId": "81dea577c7e615375e2a7bd011ad1a6b"
},
{
"oldId": "647a450f5feba4859297886a4263b653",
"newId": "c6df2cf8cca12cad76fa89f5ee0b3214"
}
]
}
@@ -449,14 +449,22 @@ rule "ETC.3.1: Redact logos (non vertebrate study)"
// Rule unit: ETC.5
rule "ETC.5.0: Ignore dossier_redaction entries if confidentiality is not 'confidential'"
rule "ETC.5.0: Skip dossier_redaction entries if confidentiality is 'confidential'"
when
FileAttribute(label == "Confidentiality", value == "confidential")
$dossierRedaction: TextEntity(type() == "dossier_redaction")
then
$dossierRedaction.skip("ETC.5.0", "Ignore dossier_redaction when confidential");
$dossierRedaction.getIntersectingNodes().forEach(node -> update(node));
end
rule "ETC.5.1: Remove dossier_redaction entries if confidentiality is not 'confidential'"
when
not FileAttribute(label == "Confidentiality", value == "confidential")
$dossierRedaction: TextEntity(type() == "dossier_redaction")
then
$dossierRedaction.ignore("ETC.5.0", "Ignore dossier redactions, when not confidential");
update($dossierRedaction);
$dossierRedaction.getIntersectingNodes().forEach(node -> update(node));
$dossierRedaction.remove("ETC.5.1", "Remove dossier_redaction when not confidential");
retract($dossierRedaction);
end
@@ -33,7 +33,11 @@ public class RuleFileMigrator {
rulesToAdd.forEach(ruleFileBluePrint::addRule);
}
String migratedRulesString = RuleFileFactory.buildRuleString(ruleFileBluePrint);
RuleFileBluePrint newBluePrint = new RuleFileBluePrint(combinedBluePrint.imports(),
combinedBluePrint.globals(),
combinedBluePrint.queries(),
ruleFileBluePrint.ruleClasses());
String migratedRulesString = RuleFileFactory.buildRuleString(newBluePrint);
String migratedFilePath = ruleFile.getAbsolutePath();
try (var out = new FileOutputStream(migratedFilePath)) {
out.write(migratedRulesString.getBytes(StandardCharsets.UTF_8));
@@ -54,6 +54,8 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
global Document document
global EntityCreationService entityCreationService
global ManualChangesApplicationService manualChangesApplicationService
@@ -157,20 +159,20 @@ rule "CBI.3.0: Redacted because Section contains a vertebrate"
rule "CBI.3.1: Redacted because table row contains a vertebrate"
when
$table: Table(hasEntitiesOfType("vertebrate"), (hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("vertebrate"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
$cellsWithvertebrate: TableCell() from $table.streamTableCellsWhichContainType("vertebrate").toList()
$tableCell: TableCell(row == $cellsWithvertebrate.row) from $table.streamTableCells().toList()
$authorOrAddress: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("vertebrate"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.applyWithReferences(
$authorOrAddress.applyWithReferences(
"CBI.3.1",
"Vertebrate found",
"Reg (EC) No 1107/2009 Art. 63 (2g)",
$table.getEntitiesOfTypeInSameRow("vertebrate", entity)
$table.getEntitiesOfTypeInSameRow("vertebrate", $authorOrAddress)
);
});
end
rule "CBI.3.2: Do not redact because Section does not contain a vertebrate"
when
$section: Section(!hasTables(), !hasEntitiesOfType("vertebrate"), (hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
@@ -207,23 +209,21 @@ rule "CBI.4.0: Do not redact Names and Addresses if no_redaction_indicator is fo
});
end
rule "CBI.4.1: Do not redact Names and Addresses if no_redaction_indicator is found in table row"
rule "CBI.4.1: Redacted because table row contains a vertebrate"
when
$table: Table(hasEntitiesOfType("no_redaction_indicator"),
hasEntitiesOfType("vertebrate"),
(hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("no_redaction_indicator"), hasEntitiesOfType("vertebrate"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
TableCell($row: row) from $table.streamTableCellsWhichContainType("vertebrate").toList()
TableCell(row == $row) from $table.streamTableCellsWhichContainType("no_redaction_indicator").toList()
$tableCell: TableCell(row == $row) from $table.streamTableCells().toList()
$authorOrAddress: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("vertebrate", "no-redaction_indicator"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.skipWithReferences(
$authorOrAddress.skipWithReferences(
"CBI.4.1",
"Vertebrate but a no redaction indicator found",
Stream.concat(
$table.getEntitiesOfTypeInSameRow("vertebrate", entity).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", entity).stream()).toList()
$table.getEntitiesOfTypeInSameRow("vertebrate", $authorOrAddress).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", $authorOrAddress).stream()).toList()
);
});
end
@@ -250,22 +250,20 @@ rule "CBI.5.0: Redact Names and Addresses if no_redaction_indicator but also red
rule "CBI.5.1: Redact Names and Addresses if no_redaction_indicator but also redaction_indicator is found in table row"
when
$table: Table(hasEntitiesOfType("no_redaction_indicator"),
hasEntitiesOfType("redaction_indicator"),
(hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("no_redaction_indicator"), hasEntitiesOfType("redaction_indicator"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
TableCell($row: row) from $table.streamTableCellsWhichContainType("redaction_indicator").toList()
TableCell(row == $row) from $table.streamTableCellsWhichContainType("no_redaction_indicator").toList()
$tableCell: TableCell(row == $row) from $table.streamTableCells().toList()
$entity: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("redaction_indicator", "no_redaction_indicator"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.applyWithReferences(
$entity.applyWithReferences(
"CBI.5.1",
"no_redaction_indicator but also redaction_indicator found",
"Reg (EC) No 1107/2009 Art. 63 (2g)",
Stream.concat(
$table.getEntitiesOfTypeInSameRow("vertebrate", entity).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", entity).stream()).toList()
$table.getEntitiesOfTypeInSameRow("redaction_indicator", $entity).stream(),
$table.getEntitiesOfTypeInSameRow("no_redaction_indicator", $entity).stream()).toList()
);
});
end
@@ -355,18 +353,17 @@ rule "CBI.8.0: Redacted because Section contains must_redact entity"
rule "CBI.8.1: Redacted because table row contains must_redact entity"
when
$table: Table(hasEntitiesOfType("must_redact"), (hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address")))
$table: Table(hasEntitiesOfType("must_redact"), hasEntitiesOfType("CBI_author") || hasEntitiesOfType("CBI_address"))
$cellsWithMustRedact: TableCell() from $table.streamTableCellsWhichContainType("must_redact").toList()
$tableCell: TableCell(row == $cellsWithMustRedact.row) from $table.streamTableCells().toList()
$authorOrAddress: TextEntity(type() == "CBI_author" || type() == "CBI_address", active()) from $tableCell.getEntities()
then
$table.streamEntitiesWhereRowContainsEntitiesOfType(List.of("must_redact"))
.filter(entity -> entity.getType().equals("CBI_author") || entity.getType().equals("CBI_address"))
.forEach(entity -> {
entity.applyWithReferences(
$authorOrAddress.applyWithReferences(
"CBI.8.1",
"must_redact entity found",
"Must_redact found",
"Reg (EC) No 1107/2009 Art. 63 (2g)",
$table.getEntitiesOfTypeInSameRow("must_redact", entity)
$table.getEntitiesOfTypeInSameRow("must_redact", $authorOrAddress)
);
});
end
@@ -448,7 +445,6 @@ rule "CBI.12.0: Redact and recommend TableCell with header 'Author' or 'Author(s
TableCell(!header, containsAnyString("Yes", "Y"), $rowWithYes: row) from $table.streamCol($vertebrateCol).toList()
$authorCell: TableCell(row == $rowWithYes) from $table.streamCol($authorCol).toList()
then
entityCreationService.bySemanticNode($authorCell, "CBI_author", EntityType.ENTITY)
.ifPresent(authorEntity -> {
authorEntity.redact("CBI.12.0", "Redacted because it's row belongs to a vertebrate study", "Article 39(e)(3) of Regulation (EC) No 178/2002");
@@ -743,7 +739,7 @@ rule "PII.1.2: Redact typoed Emails with indicator"
when
$section: Section(containsString("@") || containsStringIgnoreCase("mail"))
then
entityCreationService.byRegexIgnoreCase("mail[:\\.\\s]{1,2}([\\w\\/\\-\\{\\(\\. ]{3,20}(@|a|f)\\s?[\\w\\/\\-\\{\\(\\. ]{3,20}(\\. \\w{2,4}\\b|\\.\\B|\\.\\w{1,4}\\b))", "PII", EntityType.ENTITY, $section)
entityCreationService.byRegexIgnoreCase("mail[:\\.\\s]{1,2}([\\w\\/\\-\\{\\(\\. ]{3,20}(@|a|f)\\s?[\\w\\/\\-\\{\\(\\. ]{3,20}(\\. \\w{2,4}\\b|\\.\\B|\\.\\w{1,4}\\b))", "PII", EntityType.ENTITY, 1, $section)
.forEach(emailEntity -> emailEntity.redact("PII.1.2", "Personal information found", "Article 39(e)(3) of Regulation (EC) No 178/2002"));
end
@@ -1163,13 +1159,22 @@ rule "ETC.4.2: Redact dossier dictionary entries"
// Rule unit: ETC.5
rule "ETC.5.0: Ignore dossier_redaction entries if confidentiality is not 'confidential'"
rule "ETC.5.0: Skip dossier_redaction entries if confidentiality is 'confidential'"
when
FileAttribute(label == "Confidentiality", value == "confidential")
$dossierRedaction: TextEntity(type() == "dossier_redaction")
then
$dossierRedaction.skip("ETC.5.0", "Ignore dossier_redaction when confidential");
$dossierRedaction.getIntersectingNodes().forEach(node -> update(node));
end
rule "ETC.5.1: Remove dossier_redaction entries if confidentiality is not 'confidential'"
when
not FileAttribute(label == "Confidentiality", value == "confidential")
$dossierRedaction: TextEntity(type() == "dossier_redaction")
then
$dossierRedaction.ignore("ETC.5.0", "Ignore dossier redactions, when not confidential");
$dossierRedaction.getIntersectingNodes().forEach(node -> update(node));
$dossierRedaction.remove("ETC.5.1", "Remove dossier_redaction when not confidential");
retract($dossierRedaction);
end
@@ -1438,7 +1443,7 @@ rule "MAN.3.2: Apply image recategorization"
rule "MAN.3.3: Apply recategorization entities by default"
salience 128
when
$entity: IEntity(getManualOverwrite().getRecategorized().orElse(false))
$entity: TextEntity(getManualOverwrite().getRecategorized().orElse(false), !dictionary.isHint(type()))
then
$entity.apply("MAN.3.3", "Recategorized entities are applied by default.", $entity.legalBasis());
end
@@ -1474,7 +1479,7 @@ rule "X.0.0: Remove Entity contained by Entity of same type"
salience 65
when
$larger: TextEntity($type: type(), $entityType: entityType, active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges(), active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges())
then
$contained.remove("X.0.0", "remove Entity contained by Entity of same type");
retract($contained);
@@ -1502,7 +1507,7 @@ rule "X.2.0: Remove Entity of type ENTITY when contained by FALSE_POSITIVE"
salience 64
when
$falsePositive: TextEntity($type: type(), entityType == EntityType.FALSE_POSITIVE, active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges(), active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges())
then
$entity.getIntersectingNodes().forEach(node -> update(node));
$entity.remove("X.2.0", "remove Entity of type ENTITY when contained by FALSE_POSITIVE");
@@ -1515,7 +1520,7 @@ rule "X.3.0: Remove Entity of type RECOMMENDATION when contained by FALSE_RECOMM
salience 64
when
$falseRecommendation: TextEntity($type: type(), entityType == EntityType.FALSE_RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.3.0", "remove Entity of type RECOMMENDATION when contained by FALSE_RECOMMENDATION");
retract($recommendation);
@@ -1527,7 +1532,7 @@ rule "X.4.0: Remove Entity of type RECOMMENDATION when text range equals ENTITY
salience 256
when
$entity: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$entity.addEngines($recommendation.getEngines());
$recommendation.remove("X.4.0", "remove Entity of type RECOMMENDATION when text range equals ENTITY with same type");
@@ -1540,19 +1545,17 @@ rule "X.5.0: Remove Entity of type RECOMMENDATION when intersected by ENTITY"
salience 256
when
$entity: TextEntity((entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.0", "remove Entity of type RECOMMENDATION when intersected by ENTITY");
retract($recommendation);
end
// Rule unit: X.5
rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATION"
salience 256
when
$entity: TextEntity($type: type(), entityType == EntityType.RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.1", "remove Entity of type RECOMMENDATION when contained by RECOMMENDATION");
retract($recommendation);
@@ -1560,30 +1563,70 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
// Rule unit: X.6
rule "X.6.0: Remove Entity of lower rank, when contained by by entity of type ENTITY"
rule "X.6.0: Remove Entity of lower rank, when contained by entity of type ENTITY or HINT"
salience 32
when
$higherRank: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges(), active())
$lowerRank: TextEntity(containedBy($higherRank), type() != $type, dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), !hasManualChanges())
then
$lowerRank.getIntersectingNodes().forEach(node -> update(node));
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY");
$lowerRank.remove("X.6.0", "remove Entity of lower rank, when contained by entity of type ENTITY or HINT");
retract($lowerRank);
end
rule "X.6.1: remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity"
rule "X.6.1: remove Entity, when contained in another entity of type ENTITY or HINT with larger text range"
salience 32
when
$higherRank: TextEntity($type: type(), $value: value, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active(), !hasManualChanges())
$lowerRank: TextEntity(intersects($higherRank), type() != $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), dictionary.getDictionaryRank(type) < dictionary.getDictionaryRank($type), active(), $lowerRank.getValue().length() > $value.length())
$outer: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$inner: TextEntity(containedBy($outer), type() != $type, $outer.getTextRange().length > getTextRange().length(), !hasManualChanges())
then
$higherRank.getIntersectingNodes().forEach(node -> update(node));
$higherRank.remove("X.6.1", "remove Entity of higher rank, when intersected by entity of type ENTITY and length of lower rank Entity is bigger than the higher rank Entity");
retract($higherRank);
$inner.getIntersectingNodes().forEach(node -> update(node));
$inner.remove("X.6.1", "remove Entity, when contained in another entity of type ENTITY or HINT with larger text range");
retract($inner);
end
// Rule unit: X.8
rule "X.8.0: Remove Entity when text range and type equals to imported Entity"
salience 257
when
$entity: TextEntity($type: type(), engines contains Engine.IMPORTED, active())
$other: TextEntity(getTextRange().equals($entity.getTextRange()), this != $entity, type() == $type, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.0", "remove Entity when text range and type equals to imported Entity");
$entity.addEngines($other.getEngines());
retract($other);
end
rule "X.8.1: Remove Entity when intersected by imported Entity"
salience 256
when
$entity: TextEntity(engines contains Engine.IMPORTED, active())
$other: TextEntity(intersects($entity), this != $entity, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.1", "remove Entity when intersected by imported Entity");
retract($other);
end
// Rule unit: X.9.0
rule "X.9.0: Merge mostly contained signatures"
when
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI)
$signature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.ALGORITHM, mostlyContains($aiSignature, 0.8))
then
$aiSignature.remove("X.9.0", "removed because already contained by alogrithm signature");
$signature.addEngine(LayoutEngine.AI);
end
// Rule unit: X.10.0
rule "X.10.0: remove false positives of ai"
when
$anyImage: Image(engines contains LayoutEngine.ALGORITHM)
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI, !mostlyContainedBy($anyImage, 0.8))
then
$aiSignature.remove("X.10.0", "Removed because false positive");
end
//------------------------------------ File attributes rules ------------------------------------
// Rule unit: FA.1
@@ -54,6 +54,8 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
global Document document
global EntityCreationService entityCreationService
global ManualChangesApplicationService manualChangesApplicationService
@@ -1299,7 +1301,6 @@ rule "TAB.7.0: Indicator (Species)"
.ifPresent(redactionEntity -> redactionEntity.apply("TAB.7.0", "Vertebrate study found"));
end
//------------------------------------ Manual redaction rules ------------------------------------
// Rule unit: MAN.0
@@ -1423,7 +1424,7 @@ rule "MAN.3.2: Apply image recategorization"
rule "MAN.3.3: Apply recategorization entities by default"
salience 128
when
$entity: IEntity(getManualOverwrite().getRecategorized().orElse(false))
$entity: TextEntity(getManualOverwrite().getRecategorized().orElse(false), !dictionary.isHint(type()))
then
$entity.apply("MAN.3.3", "Recategorized entities are applied by default.", $entity.legalBasis());
end
@@ -1459,7 +1460,7 @@ rule "X.0.0: Remove Entity contained by Entity of same type"
salience 65
when
$larger: TextEntity($type: type(), $entityType: entityType, active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges(), active())
$contained: TextEntity(containedBy($larger), type() == $type, entityType == $entityType, this != $larger, !hasManualChanges())
then
$contained.remove("X.0.0", "remove Entity contained by Entity of same type");
retract($contained);
@@ -1471,7 +1472,7 @@ rule "X.2.0: Remove Entity of type ENTITY when contained by FALSE_POSITIVE"
salience 64
when
$falsePositive: TextEntity($type: type(), entityType == EntityType.FALSE_POSITIVE, active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges(), active())
$entity: TextEntity(containedBy($falsePositive), type() == $type, (entityType == EntityType.ENTITY || entityType == EntityType.HINT), !hasManualChanges())
then
$entity.getIntersectingNodes().forEach(node -> update(node));
$entity.remove("X.2.0", "remove Entity of type ENTITY when contained by FALSE_POSITIVE");
@@ -1484,7 +1485,7 @@ rule "X.3.0: Remove Entity of type RECOMMENDATION when contained by FALSE_RECOMM
salience 64
when
$falseRecommendation: TextEntity($type: type(), entityType == EntityType.FALSE_RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($falseRecommendation), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.3.0", "remove Entity of type RECOMMENDATION when contained by FALSE_RECOMMENDATION");
retract($recommendation);
@@ -1496,7 +1497,7 @@ rule "X.4.0: Remove Entity of type RECOMMENDATION when text range equals ENTITY
salience 256
when
$entity: TextEntity($type: type(), (entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(getTextRange().equals($entity.getTextRange()), type() == $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$entity.addEngines($recommendation.getEngines());
$recommendation.remove("X.4.0", "remove Entity of type RECOMMENDATION when text range equals ENTITY with same type");
@@ -1509,7 +1510,7 @@ rule "X.5.0: Remove Entity of type RECOMMENDATION when intersected by ENTITY"
salience 256
when
$entity: TextEntity((entityType == EntityType.ENTITY || entityType == EntityType.HINT), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(intersects($entity), entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.0", "remove Entity of type RECOMMENDATION when intersected by ENTITY");
retract($recommendation);
@@ -1521,7 +1522,7 @@ rule "X.5.1: Remove Entity of type RECOMMENDATION when contained by RECOMMENDATI
salience 256
when
$entity: TextEntity($type: type(), entityType == EntityType.RECOMMENDATION, active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges(), active())
$recommendation: TextEntity(containedBy($entity), type() != $type, entityType == EntityType.RECOMMENDATION, !hasManualChanges())
then
$recommendation.remove("X.5.1", "remove Entity of type RECOMMENDATION when contained by RECOMMENDATION");
retract($recommendation);
@@ -1539,6 +1540,49 @@ rule "X.7.0: Remove all images"
end
// Rule unit: X.8
rule "X.8.0: Remove Entity when text range and type equals to imported Entity"
salience 257
when
$entity: TextEntity($type: type(), engines contains Engine.IMPORTED, active())
$other: TextEntity(getTextRange().equals($entity.getTextRange()), this != $entity, type() == $type, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.0", "remove Entity when text range and type equals to imported Entity");
$entity.addEngines($other.getEngines());
retract($other);
end
rule "X.8.1: Remove Entity when intersected by imported Entity"
salience 256
when
$entity: TextEntity(engines contains Engine.IMPORTED, active())
$other: TextEntity(intersects($entity), this != $entity, engines not contains Engine.IMPORTED)
then
$other.remove("X.8.1", "remove Entity when intersected by imported Entity");
retract($other);
end
// Rule unit: X.9.0
rule "X.9.0: Merge mostly contained signatures"
when
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI)
$signature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.ALGORITHM, mostlyContains($aiSignature, 0.8))
then
$aiSignature.remove("X.9.0", "removed because already contained by alogrithm signature");
$signature.addEngine(LayoutEngine.AI);
end
// Rule unit: X.10.0
rule "X.10.0: remove false positives of ai"
when
$anyImage: Image(engines contains LayoutEngine.ALGORITHM)
$aiSignature: Image(imageType == ImageType.SIGNATURE, engines contains LayoutEngine.AI, !mostlyContainedBy($anyImage, 0.8))
then
$aiSignature.remove("X.10.0", "Removed because false positive");
end
//------------------------------------ File attributes rules ------------------------------------
// Rule unit: FA.1
@@ -7,5 +7,6 @@ X.4.0
X.5.0
X.5.1
X.6.*
X.8.*
FA.*.*
LDS.*.*
@@ -6,5 +6,6 @@ X.4.0
X.5.0
X.5.1
X.7.0
X.8.*
FA.*.*
LDS.*.*
@@ -25,9 +25,9 @@ public class RuleFileMigrationTest {
// Put your redaction service drools paths and dossier-templates paths both RM and DM here
static final List<String> ruleFileDirs = List.of(
"/home/kschuettler/iqser/redaction/redaction-service/redaction-service-v1/redaction-service-server-v1/src/test/resources/drools",
"/home/kschuettler/iqser/fforesight/dossier-templates-v2/",
"/home/kschuettler/iqser/redaction/dossier-templates-v2/");
"/Users/maverickstuder/Documents/RedactManager/redaction-service/redaction-service-v1/redaction-service-server-v1/src/test/resources/drools",
"/Users/maverickstuder/Documents/DocuMine/dossier-templates-v2/",
"/Users/maverickstuder/Documents/RedactManager/dossier-templates-v2/");
@Test