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252 Commits
Author SHA1 Message Date
Andrei Isvoran 97291ffcae test publish stuff 2024-03-04 09:55:52 +02:00
Kevin Tumma 9a9867e739 Update .gitlab-ci.yml 2024-03-01 14:13:31 +01:00
Andrei Isvoran aa20a5c201 disable test 2024-03-01 14:56:14 +02:00
Andrei Isvoran 600394c366 change gitlab-ci 2024-03-01 14:51:59 +02:00
Andrei Isvoran 8fd9855b2c add public to it 2024-03-01 12:11:53 +02:00
Andrei Isvoran 2a8f1ecdd2 add public to it 2024-03-01 12:05:11 +02:00
Andrei Isvoran 6202e95ad8 change to pages 2024-03-01 11:59:26 +02:00
Andrei Isvoran b1fee50718 change to pages 2024-03-01 11:53:27 +02:00
Andrei Isvoran 3a59bff246 add publish keyword 2024-03-01 11:49:19 +02:00
Andrei Isvoran 57683d49b6 fix path 2024-03-01 11:48:06 +02:00
Andrei Isvoran 0fd01fa1c3 add dependsOn(delombok) 2024-03-01 11:44:37 +02:00
Andrei Isvoran 6d66e5dac3 add sleep 2024-03-01 11:24:59 +02:00
Andrei Isvoran 446c3e56a8 draft 2024-03-01 11:23:45 +02:00
Andrei Isvoran daab1f1b0a draft 2024-03-01 10:10:24 +02:00
Andrei Isvoran af70705250 draft 2024-03-01 10:06:55 +02:00
Andrei Isvoran f29f8626e9 draft 2024-03-01 09:59:31 +02:00
Andrei Isvoran 940e6e7b42 draft 2024-03-01 09:52:13 +02:00
Andrei Isvoran c08ad75893 draft 2024-03-01 09:49:55 +02:00
Andrei Isvoran b8d9b101c9 draft 2024-03-01 09:47:28 +02:00
Andrei Isvoran a1ea354225 draft 2024-03-01 09:39:53 +02:00
Andrei Isvoran e9f516580e draft 2024-02-29 17:48:02 +02:00
Andrei Isvoran b006b8c1ab draft 2024-02-29 17:36:31 +02:00
Andrei Isvoran 78912adeb6 draft 2024-02-29 17:33:23 +02:00
Andrei Isvoran 9bbff158c0 draft 2024-02-29 17:28:33 +02:00
Andrei Isvoran 6e0b343de3 draft 2024-02-29 17:21:39 +02:00
Andrei Isvoran 5bc9b60623 draft 2024-02-29 17:16:09 +02:00
Andrei Isvoran e8b32681ce draft 2024-02-29 16:40:59 +02:00
Andrei Isvoran d29b6bf816 draft 2024-02-29 16:39:09 +02:00
Corina Olariu b6ad1b5e91 Merge branch 'RED-8590' into 'master'
RED-8590 - Missing reason for added CBI Address, recategorized LOGO and signature

Closes RED-8590

See merge request redactmanager/redaction-service!293
2024-02-29 13:17:56 +01:00
Corina Olariu 5f961b0f99 RED-8590 - Missing reason for added CBI Address, recategorized LOGO and signature 2024-02-29 13:17:56 +01:00
Andrei Isvoran 89dea4138a Merge branch 'RED-8586' into 'master'
RED-8586 - Fix confidentiality rules

Closes RED-8586

See merge request redactmanager/redaction-service!294
2024-02-29 12:58:23 +01:00
Andrei Isvoran 4fb8b10429 RED-8586 - Fix confidentiality rules 2024-02-29 12:58:23 +01:00
Yannik Hampe f09a4e4d42 Merge branch 'RED-8481-rules' into 'master'
RED-8481: use visual layout parser for signature extraction

Closes RED-8481

See merge request redactmanager/redaction-service!296
2024-02-29 09:19:41 +01:00
Yannik Hampe ab5dc2f46b RED-8481: use visual layout parser for signature extraction 2024-02-29 09:19:41 +01:00
Kilian Schüttler b50899e18c Merge branch 'RED-8615' into 'master'
RED-8615: Revert and change the current behaviour of manualChanges

Closes RED-8615

See merge request redactmanager/redaction-service!291
2024-02-28 13:12:40 +01:00
Kilian Schüttler 30d0fd7def RED-8615: Revert and change the current behaviour of manualChanges 2024-02-28 13:12:40 +01:00
Yannik Hampe 23b8d164d2 Merge branch 'RED-8481-rules' into 'master'
RED-8481: use visual layout parser for signature extraction

Closes RED-8481

See merge request redactmanager/redaction-service!290
2024-02-28 09:04:55 +01:00
Yannik Hampe 0bfd92846f RED-8481: use visual layout parser for signature extraction 2024-02-28 09:04:55 +01:00
Kilian Schüttler ca3bb600f3 Merge branch 'RED-7384' into 'master'
More migration fixes

Closes RED-7384

See merge request redactmanager/redaction-service!280
2024-02-27 10:04:27 +01:00
Kilian Schüttler 5ffef504e4 More migration fixes 2024-02-27 10:04:27 +01:00
Yannik Hampe 94b7b741f8 Merge branch 'RED-8481' into 'master'
RED-8481: use visual layout parser for signature extraction

Closes RED-8481

See merge request redactmanager/redaction-service!289
2024-02-27 08:38:03 +01:00
Yannik Hampe 79ac1105f6 RED-8481: use visual layout parser for signature extraction 2024-02-27 08:38:03 +01:00
Kilian Schüttler 87f74c31c6 Merge branch 'hotfix' into 'master'
hotfix: streamEntitiesWhereRowContainsEntityOfType is broken

See merge request redactmanager/redaction-service!285
2024-02-23 14:30:48 +01:00
Kilian Schüttler 5f67efc8c7 hotfix: streamEntitiesWhereRowContainsEntityOfType is broken 2024-02-23 14:30:48 +01:00
Corina Olariu fd3fe87d90 Merge branch 'RED-8589' into 'master'
RED-8589 - Add "MANUAL" engine to all annotations that has entries in manualChanges

Closes RED-8589

See merge request redactmanager/redaction-service!282
2024-02-23 10:50:05 +01:00
Corina Olariu a85197cda4 RED-8589 - Add "MANUAL" engine to all annotations that has entries in manualChanges 2024-02-23 10:50:05 +01:00
Maverick Studer 05884533d1 Merge branch 'RED-8607' into 'master'
RED-8607: Higher rank hint removed if overlaps lower rank redaction

Closes RED-8607

See merge request redactmanager/redaction-service!283
2024-02-22 15:53:31 +01:00
Maverick Studer 310daa8060 RED-8607: Higher rank hint removed if overlaps lower rank redaction 2024-02-22 15:53:31 +01:00
Andrei Isvoran 7b798ae543 Merge branch 'RED-8588' into 'master'
RED-8588 - Fix ADD_TO_DICT

Closes RED-8588

See merge request redactmanager/redaction-service!281
2024-02-20 14:33:32 +01:00
Andrei Isvoran 3143f87587 RED-8588 - Fix ADD_TO_DICT 2024-02-20 14:33:31 +01:00
Corina Olariu 5fb3626208 Merge branch 'RED-7886' into 'master'
RED-7886 - Endpoint for rule validation

Closes RED-7886

See merge request redactmanager/redaction-service!278
2024-02-20 07:57:48 +01:00
Corina Olariu fb2d1fb2f2 RED-7886 - Endpoint for rule validation 2024-02-20 07:57:48 +01:00
Ali Oezyetimoglu cadbf6f275 Merge branch 'RED-8480' into 'master'
RED-8480: updated persistence service version and added legalBasis in ManualChangeOverwrite

Closes RED-8480

See merge request redactmanager/redaction-service!279
2024-02-16 14:58:27 +01:00
Ali Oezyetimoglu ea5d315dc3 RED-8480: updated persistence service version and added legalBasis in ManualChangeOverwrite 2024-02-16 14:58:27 +01:00
Andrei Isvoran 46990eb632 Merge branch 'RED-8490' into 'master'
RED-8490 - Add ADD_TO_DICTIONARY in manual changes for entries

Closes RED-8490

See merge request redactmanager/redaction-service!277
2024-02-14 08:51:09 +01:00
Andrei Isvoran 71e799bb92 RED-8490 - Add ADD_TO_DICTIONARY in manual changes for entries 2024-02-14 08:51:09 +01:00
Maverick Studer 09069b0095 Merge branch 'RED-8534' into 'master'
RED-8534: RECTANGLE is ENTITY instead of AREA

Closes RED-8534

See merge request redactmanager/redaction-service!276
2024-02-13 14:25:11 +01:00
Maverick Studer 01c44f6877 RED-8534: RECTANGLE is ENTITY instead of AREA 2024-02-13 14:25:11 +01:00
Kilian Schüttler 3b94e68af7 Merge branch 'RED-7384' into 'master'
RED-7384: various fixes for migration

See merge request redactmanager/redaction-service!275
2024-02-13 09:41:04 +01:00
Kilian Schüttler 5f598ff70c RED-7384: various fixes for migration 2024-02-13 09:41:03 +01:00
Andrei Isvoran b8064ce6e3 Merge branch 'RED-8542' into 'master'
RED-8542 - Only SKIPPED redaction should be displayed if it overlaps an ACTIVE...

Closes RED-8542

See merge request redactmanager/redaction-service!274
2024-02-13 08:17:40 +01:00
Andrei Isvoran 3b8202d21b RED-8542 - Only SKIPPED redaction should be displayed if it overlaps an ACTIVE... 2024-02-13 08:17:40 +01:00
Maverick Studer 94a75aa100 Merge branch 'RED-8451' into 'master'
RED-8451: RECATEGORIZED hint is APPLIED instead of SKIPPED

Closes RED-8451

See merge request redactmanager/redaction-service!273
2024-02-06 14:28:11 +01:00
Maverick Studer cc62bbc3ec RED-8451: RECATEGORIZED hint is APPLIED instead of SKIPPED 2024-02-06 14:28:11 +01:00
Maverick Studer 78869a13f6 Merge branch 'RED-8372' into 'master'
RED-8372: Include additional info about imported redactions in redaction annotations

Closes RED-8372

See merge request redactmanager/redaction-service!272
2024-02-06 09:58:00 +01:00
Maverick Studer c1028e7431 RED-8372: Include additional info about imported redactions in redaction annotations 2024-02-06 09:58:00 +01:00
Andrei Isvoran aa977c5a32 Merge branch 'RED-8248-dm' into 'master'
RED-8428 - Keep RESIZE for backwards compatibility for documine. RESIZE will...

Closes RED-8248

See merge request redactmanager/redaction-service!270
2024-02-05 14:34:57 +01:00
Andrei Isvoran 06eb4929a7 RED-8428 - Keep RESIZE for backwards compatibility for documine. RESIZE will... 2024-02-05 14:34:57 +01:00
Andrei Isvoran befd6f9a08 Merge branch 'RED-8428' into 'master'
RED-8428 - Add RESIZE_LOCALLY and RESIZE_IN_DICTIONARY in ManualRedactionType...

Closes RED-8428

See merge request redactmanager/redaction-service!269
2024-02-05 11:29:24 +01:00
Andrei Isvoran 053526d2da RED-8428 - Add RESIZE_LOCALLY and RESIZE_IN_DICTIONARY in ManualRedactionType... 2024-02-05 11:29:24 +01:00
Maverick Studer 1758dc1333 Merge branch 'RED-8424' into 'master'
RED-8424: Case-Sensitive Redaction Not Functioning Properly for Case-Sensitive Entities

Closes RED-8424

See merge request redactmanager/redaction-service!268
2024-02-05 09:59:50 +01:00
Maverick Studer a0d2430319 RED-8424: Case-Sensitive Redaction Not Functioning Properly for Case-Sensitive Entities 2024-02-05 09:59:50 +01:00
Dominique Eifländer b44e49b4d9 Merge branch 'RED-8171' into 'master'
RED-8171: Traces do not stop at @Async

Closes RED-8171

See merge request redactmanager/redaction-service!267
2024-02-02 13:44:09 +01:00
Dominique Eifländer ec2e359dd4 RED-8171: Traces do not stop at @Async 2024-02-02 13:34:23 +01:00
Andrei Isvoran 4d191d7bbd Merge branch 'RED-8347' into 'master'
RED-8347 - Add manual changes in entity log for removed entities

Closes RED-8347

See merge request redactmanager/redaction-service!266
2024-02-02 11:23:08 +01:00
Andrei Isvoran 930ad5b25e RED-8347 - Add manual changes in entity log for removed entities 2024-02-02 11:23:08 +01:00
Dominique Eifländer ce9ed6de9b Merge branch 'RED-8372' into 'master'
RED-8372: Include additional info about redactions in redaction annotations

Closes RED-8372

See merge request redactmanager/redaction-service!263
2024-02-02 11:11:30 +01:00
Maverick Studer 7be530b445 RED-8372: Include additional info about redactions in redaction annotations 2024-02-02 11:11:30 +01:00
Kilian Schüttler 7505766a83 Merge branch 'RED-7384' into 'master'
RED-7384: don't attempt to migrate id's that don't change, since...

Closes RED-7384

See merge request redactmanager/redaction-service!265
2024-02-02 10:26:38 +01:00
Kilian Schüttler 328a82835e RED-7384: don't attempt to migrate id's that don't change, since... 2024-02-02 10:26:38 +01:00
Andrei Isvoran e43e9ace68 Merge branch 'RED-8049' into 'master'
RED-8049 - Change TextEntity id to be calculated based on position

Closes RED-8049

See merge request redactmanager/redaction-service!255
2024-02-01 11:30:47 +01:00
Andrei Isvoran a7111b0e24 RED-8049 - Change TextEntity id to be calculated based on position 2024-02-01 11:30:47 +01:00
Kilian Schüttler 6a7e11cd2c Merge branch 'RED-7384' into 'master'
RED-7384: fixed ignored hints, fixed false positives, enhanced test to include manual changes

Closes RED-7384

See merge request redactmanager/redaction-service!261
2024-01-29 12:25:36 +01:00
Kilian Schüttler 5444a82c7f RED-7384: fixed ignored hints, fixed false positives, enhanced test to include manual changes 2024-01-29 12:25:36 +01:00
Timo Bejan 8b1b9b427d Merge branch 'RED-8085' into 'master'
RED-8085  pmd checkup/cleanup

Closes RED-8085

See merge request redactmanager/redaction-service!262
2024-01-29 10:33:22 +01:00
Timo Bejan ba5eaec957 RED-8085 pmd checkup/cleanup 2024-01-29 10:33:22 +01:00
Dominique Eifländer 34557c7cff Merge branch 'RED-7901' into 'master'
RED-7901: Changed rules to remove all recommendations that intersect with entities

Closes RED-7901

See merge request redactmanager/redaction-service!260
2024-01-25 14:54:47 +01:00
Dominique Eifländer b8e4f64520 RED-7901: Changed rules to remove all recommendations that intersect with entities 2024-01-25 14:41:39 +01:00
Maverick Studer 925df6c7f1 Merge branch 'RED-5449' into 'master'
RED-5449: Wrong behaviour of imported redactions only from PREVIEW-File

Closes RED-5449

See merge request redactmanager/redaction-service!258
2024-01-24 11:55:26 +01:00
Maverick Studer f84f63cc64 RED-5449: Wrong behaviour of imported redactions only from PREVIEW-File 2024-01-24 11:55:26 +01:00
Kilian Schüttler 23a3d08e85 Merge branch 'hotfix' into 'master'
hotfix: analysisNumber not set in reanalysis

See merge request redactmanager/redaction-service!257
2024-01-24 09:53:54 +01:00
Kilian Schuettler 2d890d1189 hotfix: analysisNumber not set in reanalysis 2024-01-23 16:55:39 +01:00
Dominique Eifländer b55e9abd7e Merge branch 'RED-8305' into 'master'
RED-8305: Apply recategorizations by default, increase memory for unittests

Closes RED-8305

See merge request redactmanager/redaction-service!256
2024-01-22 14:22:45 +01:00
Dominique Eifländer c71241288c RED-8305: Apply recategorizations by default, increase memory for unittests 2024-01-22 13:38:47 +01:00
Ali Oezyetimoglu 158fc71813 Merge branch 'RED-8264' into 'master'
RED-8264: translated and added new rules from Syngenta dossier templates

Closes RED-8264

See merge request redactmanager/redaction-service!254
2024-01-19 13:21:43 +01:00
Ali Oezyetimoglu 44900bd5c4 RED-8264: translated and added new rules from Syngenta dossier templates 2024-01-19 12:22:09 +01:00
Kilian Schüttler 031bdb05dd Merge branch 'RED-8305' into 'master'
RED-8305: Added rule 'MAN.3.4: Apply recategorization with legalbasis change by default'

Closes RED-8305

See merge request redactmanager/redaction-service!253
2024-01-19 11:39:11 +01:00
Dominique Eifländer 5d0d218137 RED-8305: Added rule 'MAN.3.4: Apply recategorization with legalbasis change by default' 2024-01-19 11:28:49 +01:00
Corina Olariu 755b3b1adc Merge branch 'RED-7256-imported-redactions' into 'master'
RED-7256 - Overlapping annotation color from imported redaction and resized...

Closes RED-7256

See merge request redactmanager/redaction-service!249
2024-01-18 17:08:43 +01:00
Corina Olariu ac6bbf8c2f RED-7256 - Overlapping annotation color from imported redaction and resized... 2024-01-18 17:08:41 +01:00
Dominique Eifländer 896524a6c0 Merge branch 'RED-8278' into 'master'
RED-8278: Fixed skipped signatures after manual changes

Closes RED-8278

See merge request redactmanager/redaction-service!252
2024-01-18 14:05:59 +01:00
Dominique Eifländer 9dbd2ac260 RED-8278: Fixed skipped signatures after manual changes 2024-01-18 13:54:23 +01:00
Dominique Eifländer 91766f5b0f Merge branch 'RED-7384' into 'master'
RED-7384: fix minor migration issues

Closes RED-7384

See merge request redactmanager/redaction-service!251
2024-01-18 10:33:42 +01:00
Corina Olariu 192fb96552 Merge branch 'RED-8274' into 'master'
RED-8274 - Resize redaction in header leads to error state

Closes RED-8274

See merge request redactmanager/redaction-service!250
2024-01-18 10:11:48 +01:00
Corina Olariu 5a5b8625dd RED-8274 - Resize redaction in header leads to error state 2024-01-18 10:11:48 +01:00
Kilian Schuettler c5c416dd65 RED-7384: fix minor migration issues 2024-01-18 10:10:59 +01:00
Ali Oezyetimoglu 9c41888721 Merge branch 'hotfix-ali-parse-rule-identifiers' into 'master'
fix: while parsing rule identifiers the wrong length is calculated

See merge request redactmanager/redaction-service!248
2024-01-16 08:26:52 +01:00
Ali Oezyetimoglu 30323568c4 fix: while parsing rule identifiers the wrong length is calculated 2024-01-15 21:01:07 +01:00
Kilian Schüttler c9c5476cf2 Merge branch 'RED-7384' into 'master'
RED-7384: fix migration issues

Closes RED-7384

See merge request redactmanager/redaction-service!247
2024-01-12 10:27:43 +01:00
Andrei Isvoran 44aebe054e Merge branch 'RED-8173-fix' into 'master'
RED-8173 - Fix for removing and adding redaction in the same place

Closes RED-8173

See merge request redactmanager/redaction-service!243
2024-01-12 08:23:23 +01:00
Andrei Isvoran 01ae14522d RED-8173 - Fix for removing and adding redaction in the same place 2024-01-12 08:23:22 +01:00
Kilian Schuettler 3d81c7fc16 RED-7384: fix migration issues 2024-01-11 19:04:32 +01:00
Andrei Isvoran 8aad7bcdf6 Merge branch 'RED-8239' into 'master'
RED-8239 - Update dictionary for surrounding text analysis

Closes RED-8239

See merge request redactmanager/redaction-service!245
2024-01-11 17:53:04 +01:00
Andrei Isvoran f2d86d634e RED-8239 - Update dictionary for surrounding text analysis 2024-01-11 16:29:25 +02:00
Dominique Eifländer 8f19bed2b6 Merge branch 'MetaSpaceIncrease' into 'master'
Hotfix: Increased MaxMetaspaceSize to 512m to prevent OOM in performace tests

See merge request redactmanager/redaction-service!244
2024-01-11 15:20:53 +01:00
Dominique Eifländer e1da2802b0 Hotfix: Increased MaxMetaspaceSize to 512m to prevent OOM in performace tests 2024-01-11 15:16:48 +01:00
Andrei Isvoran 72ad7cc53d Merge branch 'RED-8173' into 'master'
RED-8173 - Fix for removing and adding redaction in the same place leading not working

Closes RED-8173

See merge request redactmanager/redaction-service!242
2024-01-11 08:59:16 +01:00
Andrei Isvoran 2e60e05fd1 RED-8173 - Fix for removing and adding redaction in the same place leading not working 2024-01-11 08:59:16 +01:00
Kilian Schüttler d6bff17544 Merge branch 'RED-7384' into 'master'
RED-7384: update dictionary before manual change merge

Closes RED-7384

See merge request redactmanager/redaction-service!241
2024-01-10 13:37:45 +01:00
Kilian Schuettler 82c9884654 RED-7384: update dictionary before manual change merge 2024-01-10 12:48:05 +01:00
Kilian Schüttler efc1b8385b Merge branch 'hotfix' into 'master'
hotfix: Hints should never be applied

See merge request redactmanager/redaction-service!239
2024-01-10 12:33:34 +01:00
Andrei Isvoran a2faa84f86 Merge branch 'RED-8043-more-fixes' into 'master'
RED-8043 - Correctly calculate surrounding text for manual unprocessed add redactions

Closes RED-8043

See merge request redactmanager/redaction-service!240
2024-01-10 09:21:30 +01:00
Andrei Isvoran 4f48b3f5be RED-8043 - Correctly calculate surrounding text for manual unprocessed add redactions 2024-01-10 09:21:29 +01:00
Kilian Schuettler 5168f1d8a7 hotfix: Hints should never be applied 2024-01-09 13:52:02 +01:00
Andrei Isvoran 4fea65f982 Merge branch 'RED-8043-resize-surrounding-text' into 'master'
RED-8043 - Calculate surrounding text for unprocessed manual resize

Closes RED-8043

See merge request redactmanager/redaction-service!238
2024-01-08 14:15:38 +01:00
Andrei Isvoran b42fae4054 RED-8043 - Calculate surrounding text for unprocessed manual resize 2024-01-08 14:15:38 +01:00
Dominique Eifländer 7b5c0026f9 Merge branch 'RED-8106' into 'master'
RED-8106: Prepare use redis for document data cache. Added more @Obeserved s

Closes RED-8106

See merge request redactmanager/redaction-service!237
2023-12-22 15:01:39 +01:00
Dominique Eifländer c315b52cb2 RED-8106: Prepare use redis for document data cache. Added more @Obeserved s 2023-12-22 14:29:14 +01:00
Dominique Eifländer b384cacbe3 Merge branch 'RED-1137' into 'master'
RED-1137: Do not observe actuator endpoints

Closes RED-1137

See merge request redactmanager/redaction-service!235
2023-12-20 14:19:14 +01:00
Dominique Eifländer d208769446 RED-1137: Do not observe actuator endpoints 2023-12-20 14:09:15 +01:00
Kilian Schüttler 2423989192 Merge branch 'RED-7384' into 'master'
RED-7834: additional fixes for migration

Closes RED-7384

See merge request redactmanager/redaction-service!234
2023-12-20 12:38:25 +01:00
Kilian Schüttler de9524d16b RED-7834: additional fixes for migration 2023-12-20 12:38:25 +01:00
Dominique Eifländer 8e6aa67412 Merge branch 'RED-8034' into 'master'
RED-8034: Excluded pages is indendent from analyse

Closes RED-8034

See merge request redactmanager/redaction-service!233
2023-12-19 15:12:48 +01:00
Dominique Eifländer b89b90f4ba RED-8034: Excluded pages is indendent from analyse 2023-12-19 14:15:56 +01:00
Andrei Isvoran 7f2d4b01e8 Merge branch 'RED-8043' into 'master'
RED-8043 - Don't send analysis successful call for surrounding text analysis

Closes RED-8043

See merge request redactmanager/redaction-service!232
2023-12-19 13:59:07 +01:00
Andrei Isvoran 714387ad7c RED-8043 - Don't send analysis successful call for surrounding text analysis 2023-12-19 13:59:06 +01:00
Dominique Eifländer e80686fe01 Merge branch 'RED-5223' into 'master'
RED-5223: Added @Observed annotations for interesting methods

Closes RED-5223

See merge request redactmanager/redaction-service!231
2023-12-15 10:59:36 +01:00
Dominique Eifländer 90b5d7d055 RED-5223: Added @Observed annotations for interesting methods 2023-12-15 10:47:10 +01:00
Yannik Hampe 74d37a710c Merge branch 'RED-8078' into 'master'
RED-8078: Removing an entity type should trigger complete reanalysis

Closes RED-8078

See merge request redactmanager/redaction-service!230
2023-12-15 10:14:22 +01:00
Yannik Hampe c4a9bb3178 RED-8078: Removing an entity type should trigger complete reanalysis 2023-12-15 10:14:22 +01:00
Dominique Eifländer bc787972cc Merge branch 'RED-5223' into 'master'
RED-5223: Use tracing-commons from fforesight

Closes RED-5223

See merge request redactmanager/redaction-service!228
2023-12-13 16:10:58 +01:00
Andrei Isvoran aa8ed82379 Merge branch 'RED-8043' into 'master'
RED-8043 - Add SurroundTextAnalysis case for unprocessed redactions to be...

Closes RED-8043

See merge request redactmanager/redaction-service!227
2023-12-13 16:06:09 +01:00
Andrei Isvoran b0c04ca0ec RED-8043 - Add SurroundTextAnalysis case for unprocessed redactions to be... 2023-12-13 16:06:09 +01:00
Dominique Eifländer 4b84885d19 RED-5223: Use tracing-commons from fforesight 2023-12-13 15:58:04 +01:00
Timo Bejan 382672bc5e Merge branch 'RED-5223' into 'master'
RED-5223: Enabled tracing, upgrade spring, use logstash-logback-encoder for json logs

Closes RED-5223

See merge request redactmanager/redaction-service!226
2023-12-11 15:56:00 +01:00
Dominique Eifländer 4a6f9449d0 RED-5223: Enabled tracing, upgrade spring, use logstash-logback-encoder for json logs 2023-12-11 15:45:17 +01:00
Timo Bejan dc03894ea4 Merge branch 'RED-7834' into 'master'
RED-7834: fixes for migration

Closes RED-7834

See merge request redactmanager/redaction-service!225
2023-12-11 15:44:41 +01:00
Kilian Schüttler c957ed8605 RED-7834: fixes for migration 2023-12-11 15:44:40 +01:00
Andrei Isvoran ac978048b0 Merge branch 'RED-8057' into 'master'
RED-8057 - Fix issue with adding dict based manual redactions with no position specified

Closes RED-8057

See merge request redactmanager/redaction-service!224
2023-12-08 16:21:07 +01:00
Andrei Isvoran f6cc0edded RED-8057 - Fix issue with adding dict based manual redactions with no position specified 2023-12-08 16:21:05 +01:00
Kilian Schüttler efc01f9d20 Merge branch 'RED-7834' into 'master'
RED-7834: fixes for migration code

Closes RED-7834

See merge request redactmanager/redaction-service!220
2023-12-08 11:05:49 +01:00
Kilian Schüttler 4047b93f89 RED-7834: fixes for migration code 2023-12-08 11:05:49 +01:00
Andrei Isvoran 03f43f4408 Merge branch 'RED-7715' into 'master'
RED-7715 - Add log4j config to enable switching between json/line logs

Closes RED-7715

See merge request redactmanager/redaction-service!223
2023-12-06 12:40:40 +01:00
Andrei Isvoran bfb3dea059 RED-7715 - Add log4j config to enable switching between json/line logs 2023-12-06 11:37:35 +02:00
Corina Olariu d7ea126d2e Merge branch 'RED-7979-forceHint' into 'master'
RED-7979 - Force Hint leads to 500 BE Error

Closes RED-7979

See merge request redactmanager/redaction-service!222
2023-12-06 08:34:37 +01:00
Corina Olariu 17bc14e9c1 RED-7979 - Force Hint leads to 500 BE Error 2023-12-06 08:34:37 +01:00
Kilian Schüttler a09645669c Merge branch 'RED-8006' into 'master'
Resolve RED-8006

Closes RED-8006

See merge request redactmanager/redaction-service!219
2023-12-01 14:44:18 +01:00
Kilian Schüttler 60aeb5bddc Resolve RED-8006 2023-12-01 14:44:18 +01:00
Ali Oezyetimoglu 26e50da938 Merge branch 'RED-8006-2' into 'master'
RED-8006: updated rules to add CBI_address in CBI.7.1

Closes RED-8006

See merge request redactmanager/redaction-service!218
2023-12-01 13:58:42 +01:00
Ali Oezyetimoglu 5d0b00204f RED-8006: updated rules to add CBI_address in CBI.7.1 2023-12-01 13:41:08 +01:00
Ali Oezyetimoglu 5ef410fb70 Merge branch 'RED-8007' into 'master'
RED-8007: made "Vertebrate == Yes" more safe

Closes RED-8007

See merge request redactmanager/redaction-service!217
2023-12-01 13:29:32 +01:00
Ali Oezyetimoglu e655ee3bb9 RED-8007: made "Vertebrate == Yes" more safe 2023-12-01 11:50:23 +01:00
Dominique Eifländer b75efedf7b Merge branch 'DM-606' into 'master'
Resolve DM-606

Closes DM-606

See merge request redactmanager/redaction-service!216
2023-11-30 13:47:15 +01:00
Kilian Schüttler 1a8fbb97e9 Resolve DM-606 2023-11-30 13:47:15 +01:00
Dominique Eifländer db6c027cac Merge branch 'hotfix' into 'master'
hotfix: filter entities with empty value in redactionLog and entityLog

See merge request redactmanager/redaction-service!215
2023-11-30 13:25:17 +01:00
Kilian Schüttler 66ac1429b0 hotfix: filter entities with empty value in redactionLog and entityLog 2023-11-30 13:25:17 +01:00
Corina Olariu 0acc731113 Merge branch 'RED-7991' into 'master'
RED-7991: Do not skip readded manual redactions

Closes RED-7991

See merge request redactmanager/redaction-service!212
2023-11-29 15:28:21 +01:00
Dominique Eifländer 07a9fbc2e1 RED-7991: Do not skip readded manual redactions 2023-11-29 15:17:14 +01:00
Dominique Eifländer 2358c01c97 Merge branch 'DM-602' into 'master'
DM-602: Do not skip annotation after chenge type for documine

Closes DM-602

See merge request redactmanager/redaction-service!211
2023-11-29 13:56:55 +01:00
Dominique Eifländer 10484cb0d6 DM-602: Do not skip annotation after chenge type for documine 2023-11-29 13:36:29 +01:00
Kilian Schüttler 5176bda496 Merge branch 'RED-7886' into 'master'
RED-7886: additional validations, now allowing for additional imports, as long...

Closes RED-7886

See merge request redactmanager/redaction-service!210
2023-11-29 09:14:54 +01:00
Kilian Schüttler 6f5e0d3491 RED-7886: additional validations, now allowing for additional imports, as long... 2023-11-29 09:14:54 +01:00
Ali Oezyetimoglu d0f1964dd9 Merge branch 'RED-7757' into 'master'
RED-7757: added check for case sensitivity when adding local dictionary entries

Closes RED-7757

See merge request redactmanager/redaction-service!209
2023-11-28 15:12:07 +01:00
Ali Oezyetimoglu 3c99e015aa RED-7757: added check for case sensitivity when adding local dictionary entries 2023-11-28 11:28:50 +01:00
Kilian Schüttler 775f43ce03 Merge branch 'enable-caching' into 'master'
enable caching

See merge request redactmanager/redaction-service!208
2023-11-24 10:43:06 +01:00
Kilian Schüttler b4cb80bc68 enable caching 2023-11-24 10:43:06 +01:00
Timo Bejan 31c74b12c2 Merge branch 'dev-profile-fix' into 'master'
Different dev port

See merge request redactmanager/redaction-service!207
2023-11-23 20:58:42 +01:00
Timo Bejan 51e959e972 Different dev port 2023-11-23 21:37:01 +02:00
Kilian Schüttler e871813a2b Merge branch 'RED-7902' into 'master'
RED-7902: fix author recommendation via rules

Closes RED-7902

See merge request redactmanager/redaction-service!206
2023-11-23 15:22:44 +01:00
Kilian Schüttler 74e7a6fb68 RED-7902: fix author recommendation via rules 2023-11-23 15:22:44 +01:00
Kilian Schüttler 5c652df904 Merge branch 'RED-7902' into 'master'
RED-7902: fix author name splitting

Closes RED-7902

See merge request redactmanager/redaction-service!204
2023-11-21 12:22:09 +01:00
Kilian Schüttler 9c31f04478 RED-7902: fix author name splitting 2023-11-21 12:22:09 +01:00
Dominique Eifländer b18498e880 Merge branch 'RED-7934' into 'master'
RED-7934: Fixed indexOutOfBounds for removed entries

Closes RED-7934

See merge request redactmanager/redaction-service!203
2023-11-21 12:18:34 +01:00
Dominique Eifländer 851f9eeb97 RED-7934: Fixed indexOutOfBounds for removed entries 2023-11-21 12:04:31 +01:00
Kilian Schüttler 79e76d688e Merge branch 'RED-7902' into 'master'
RED-7902: fix author name splitting

Closes RED-7902

See merge request redactmanager/redaction-service!202
2023-11-21 11:22:54 +01:00
Kilian Schüttler c364a6b9ef RED-7902: fix author name splitting 2023-11-21 11:22:54 +01:00
Andrei Isvoran eceefe363a Merge branch 'RED-7784' into 'master'
RED-7784 - Calculate positions and legalbasis for unprocessed redactions

Closes RED-7784

See merge request redactmanager/redaction-service!201
2023-11-20 13:45:49 +01:00
Andrei Isvoran 522c514b1a RED-7784 - Calculate positions and legalbasis for unprocessed redactions 2023-11-20 13:45:49 +01:00
Dominique Eifländer d42758b189 Merge branch 'RED-7934' into 'master'
RED-7934: Manual Redactions should be removed instead of ignored, when removed by id

Closes RED-7934

See merge request redactmanager/redaction-service!200
2023-11-17 15:36:34 +01:00
Kilian Schüttler 150cb01649 RED-7934: Manual Redactions should be removed instead of ignored, when removed by id 2023-11-17 15:36:33 +01:00
Christoph Schabert a9daac317e Merge branch 'buildFix' into 'master'
hotfix: Fixed wrong tag name

See merge request redactmanager/redaction-service!199
2023-11-17 12:36:26 +01:00
Dominique Eifländer cb103a3f83 hotfix: Fixed wrong tag name 2023-11-17 12:28:08 +01:00
Dominique Eifländer 3f9f3857f1 Merge branch 'RED-7934' into 'master'
RED-7934: Manual Redactions should be removed instead of ignored, when removed by id

Closes RED-7934

See merge request redactmanager/redaction-service!198
2023-11-17 10:36:15 +01:00
Kilian Schüttler 12a9b5029c RED-7934: Manual Redactions should be removed instead of ignored, when removed by id 2023-11-17 10:36:15 +01:00
Kilian Schüttler f79838687e Merge branch 'caching' into 'master'
enable build caching

See merge request redactmanager/redaction-service!197
2023-11-14 11:50:17 +01:00
Kilian Schüttler 95b880b92e enable build caching 2023-11-14 11:50:17 +01:00
Kilian Schüttler b499e10590 Merge branch 'RED-7631' into 'master'
RED-7631: fix recommandations being applied instead of skipped

Closes RED-7631

See merge request redactmanager/redaction-service!195
2023-11-14 11:37:30 +01:00
Kilian Schüttler b1e9f1d5a5 RED-7631: fix recommandations being applied instead of skipped 2023-11-14 11:37:30 +01:00
Ali Oezyetimoglu 20b8db3755 Merge branch 'RED-7679-BBB3' into 'master'
Resolve RED-7679 "Bbb3"

Closes RED-7679

See merge request redactmanager/redaction-service!191
2023-11-14 10:51:28 +01:00
Ali Oezyetimoglu 71789e12fa Resolve RED-7679 "Bbb3" 2023-11-14 10:51:28 +01:00
Dominique Eifländer afc689839a Merge branch 'RED-7891-2' into 'master'
RED-7891: Fixed indexOutOfBounds if imported redactions are available in reanalysis

Closes RED-7891

See merge request redactmanager/redaction-service!194
2023-11-13 14:24:58 +01:00
Dominique Eifländer 4e88bec0e4 RED-7891: Fixed indexOutOfBounds if imported redactions are available in reanalysis 2023-11-13 14:16:09 +01:00
Dominique Eifländer ad9bf6f846 Merge branch 'RED-7891' into 'master'
RED-7891: Fixed nullpointer when imported redactions are available

Closes RED-7891

See merge request redactmanager/redaction-service!193
2023-11-13 11:54:29 +01:00
Dominique Eifländer 269d72c078 RED-7891: Fixed nullpointer when imported redactions are available 2023-11-13 11:44:34 +01:00
Andrei Isvoran 3a685e5671 Merge branch 'RED-7898' into 'master'
RED-7898 - Publish rule is not applied line-wise

Closes RED-7898

See merge request redactmanager/redaction-service!190
2023-11-10 14:29:58 +01:00
Andrei Isvoran a68633091a RED-7898 - Publish rule is not applied line-wise 2023-11-10 14:29:58 +01:00
Dominique Eifländer d116a2bea3 Merge branch 'RED-7891' into 'master'
RED-7891: Fixed Nullpointer when adding importedRedactions

Closes RED-7891

See merge request redactmanager/redaction-service!192
2023-11-10 14:23:29 +01:00
Dominique Eifländer 07b14c3f77 RED-7891: Fixed Nullpointer when adding importedRedactions 2023-11-10 14:12:28 +01:00
Kilian Schüttler 7aec2801a1 Merge branch 'DM-557' into 'master'
DM-557: fix component sorting

Closes DM-557

See merge request redactmanager/redaction-service!189
2023-11-10 12:41:14 +01:00
Kilian Schüttler 6e6cea89f7 DM-557: fix component sorting 2023-11-10 12:41:14 +01:00
Andrei Isvoran 5a4947372f Merge branch 'RED-7712' into 'master'
RED-7712 - Published information does not always trigger the skip mechanism

Closes RED-7712

See merge request redactmanager/redaction-service!192
2023-11-03 08:42:48 +01:00
Andrei Isvoran 7eb0abf4da RED-7712 - Published information does not always trigger the skip mechanism 2023-11-03 08:42:48 +01:00
Kilian Schüttler 67cf5659d4 Merge branch 'hotfix' into 'master'
rule validation hotfix:

See merge request redactmanager/redaction-service!191
2023-11-02 11:13:26 +01:00
Kilian Schüttler 8d8d83bc25 rule validation hotfix: 2023-11-02 11:13:26 +01:00
Andrei Isvoran 2860089712 Merge branch 'RED-7712' into 'master'
RED-7712 - Published information does not always trigger the skip mechanism

Closes RED-7712

See merge request redactmanager/redaction-service!189
2023-11-01 08:59:11 +01:00
Andrei Isvoran 908b3ca4b2 RED-7712 - Published information does not always trigger the skip mechanism 2023-11-01 08:59:11 +01:00
Kilian Schüttler 54bb79b294 Merge branch 'RED-7631' into 'master'
RED-7631: skip manual entry hints instead of apply

Closes RED-7631

See merge request redactmanager/redaction-service!188
2023-10-31 14:09:10 +01:00
Kilian Schüttler 2e4ac644f8 RED-7631: skip manual entry hints instead of apply 2023-10-31 14:09:10 +01:00
Andrei Isvoran fbdf360fd9 Merge branch 'RED-7652' into 'master'
RED-7652 - Integrate rules-management into redaction-service & validate rules

Closes RED-7652

See merge request redactmanager/redaction-service!186
2023-10-31 10:16:14 +01:00
Andrei Isvoran a1245101de RED-7652 - Integrate rules-management into redaction-service & validate rules 2023-10-31 10:16:14 +01:00
Kilian Schüttler 698244e3f1 Merge branch 'RED-7384' into 'master'
RED-7384: first prototype for migrating redactionLogs to entityLogs

Closes RED-7384

See merge request redactmanager/redaction-service!184
2023-10-30 16:27:05 +01:00
Kilian Schüttler 8c062da5a1 RED-7384: first prototype for migrating redactionLogs to entityLogs 2023-10-30 16:27:05 +01:00
Ali Oezyetimoglu f38adabb8c Merge branch 'RED-6807-zyx' into 'master'
RED-6807: updated flora rules

Closes RED-6807

See merge request redactmanager/redaction-service!182
2023-10-26 16:47:33 +02:00
Ali Oezyetimoglu 3cb97f6e27 RED-6807: updated flora rules 2023-10-26 16:08:25 +02:00
Kilian Schüttler ddb94e4480 Merge branch 'RED-7631' into 'master'
RED-7631: add EntryType IMAGE_HINT

Closes RED-7631

See merge request redactmanager/redaction-service!181
2023-10-26 13:10:27 +02:00
Kilian Schüttler eea1857a37 RED-7631: add EntryType IMAGE_HINT 2023-10-26 13:10:27 +02:00
Andrei Isvoran a248460e70 Merge branch 'RED-7785-position' into 'master'
RED-7784 - Add position to UnprocessedManualEntity

Closes RED-7785

See merge request redactmanager/redaction-service!180
2023-10-26 12:00:57 +02:00
Ali Oezyetimoglu ead36404c0 Merge branch 'RED-7679-5' into 'master'
Resolve RED-7679 "5"

Closes RED-7679

See merge request redactmanager/redaction-service!179
2023-10-26 11:51:21 +02:00
Ali Oezyetimoglu 78add9ad9f Resolve RED-7679 "5" 2023-10-26 11:51:21 +02:00
Andrei Isvoran a2b130f75f RED-7784 - Add position to UnprocessedManualEntity 2023-10-26 11:56:16 +03:00
Andrei Isvoran 3d10dd97f9 Merge branch 'RED-7784-section' into 'master'
RED-7784 - Add section to UnprocessedManualEntity

Closes RED-7784

See merge request redactmanager/redaction-service!177
2023-10-25 14:58:57 +02:00
Andrei Isvoran 6da7c23fc2 RED-7784 - Add section to UnprocessedManualEntity 2023-10-25 15:51:04 +03:00
Andrei Isvoran 77f00914d3 Merge branch 'RED-7784-no-args-constructor' into 'master'
RED-7784 - Add no args constructor to UnprocessedManualEntity

Closes RED-7784

See merge request redactmanager/redaction-service!176
2023-10-25 13:20:36 +02:00
Andrei Isvoran ff9c0886ce RED-7784 - Add no args constructor to UnprocessedManualEntity 2023-10-25 14:12:44 +03:00
Andrei Isvoran dc07404b48 Merge branch 'RED-7784' into 'master'
RED-7784 - Apply unprocessed manual changes in reports and redactions

Closes RED-7784

See merge request redactmanager/redaction-service!170
2023-10-25 10:58:49 +02:00
Andrei Isvoran 7d0a159aed RED-7784 - Apply unprocessed manual changes in reports and redactions 2023-10-25 10:58:49 +02:00
Kilian Schüttler 0ace45ca61 Merge branch 'RED-7759' into 'master'
RED-7759: Cannot resize local manual redactions

Closes RED-7759

See merge request redactmanager/redaction-service!173
2023-10-24 15:12:42 +02:00
Kilian Schüttler b4356408b6 RED-7759: Cannot resize local manual redactions 2023-10-24 15:12:42 +02:00
Ali Oezyetimoglu 1f81167f9e Merge branch 'RED-6807-3' into 'master'
RED-6807: updated RM and DM rules

Closes RED-6807

See merge request redactmanager/redaction-service!168
2023-10-24 15:12:16 +02:00
Ali Oezyetimoglu 3c9cb68831 RED-6807: updated RM and DM rules 2023-10-24 15:12:16 +02:00
Kilian Schüttler db2b663547 Merge branch 'RED-7434' into 'master'
RED-7434 - Remove Section Grid entirely

Closes RED-7434

See merge request redactmanager/redaction-service!169
2023-10-20 15:28:07 +02:00
Corina Olariu 1d96a747e4 RED-7434 - Remove Section Grid entirely 2023-10-20 15:28:07 +02:00
Kilian Schüttler 025cc19b6c Merge branch 'hotfix' into 'master'
hotfix: write dummy AnnotationStatus to redactionLog ManualChanges

See merge request redactmanager/redaction-service!166
2023-10-19 10:01:22 +02:00
Kilian Schüttler a8180ab9d2 hotfix: write dummy AnnotationStatus to redactionLog ManualChanges 2023-10-19 10:01:22 +02:00
Yannik Hampe 44eff703e0 Merge branch 'RED-7759' into 'master'
RED-7759: Cannot resize local manual redactions

Closes RED-7759

See merge request redactmanager/redaction-service!165
2023-10-18 14:53:33 +02:00
Yannik Hampe 96d29b9e3a RED-7759: Cannot resize local manual redactions 2023-10-18 14:53:33 +02:00
Yannik Hampe e4b1824dd4 Merge branch 'RED-7040' into 'master'
RED-7040: Syngenta rule 29 does not work

Closes RED-7040

See merge request redactmanager/redaction-service!157
2023-10-16 12:36:18 +02:00
Yannik Hampe 9fcf02df73 RED-7040: Syngenta rule 29 does not work 2023-10-16 12:36:18 +02:00
Kilian Schüttler e395620e29 Merge branch 'DM-483-endless-loops' into 'master'
DM-483 - Prevent endless loops

Closes DM-483

See merge request redactmanager/redaction-service!162
2023-10-13 14:30:02 +02:00
Andrei Isvoran 157f608eaa DM-483 - Prevent endless loops 2023-10-13 14:30:02 +02:00
Kilian Schüttler 8d55619bb1 Merge branch 'RED-7631' into 'master'
RED-7631: entity log to replace redactionlog

Closes RED-7631

See merge request redactmanager/redaction-service!158
2023-10-13 10:00:21 +02:00
Kilian Schüttler 676a35da56 RED-7631: entity log to replace redactionlog 2023-10-13 10:00:21 +02:00
226 changed files with 53032 additions and 4770 deletions
+14 -1
View File
@@ -12,7 +12,7 @@ deploy:
script:
- echo "Building with gradle version ${BUILDVERSION}"
- gradle -Pversion=${BUILDVERSION} publish
- gradle bootBuildImage --cleanCache --publishImage -PbuildbootDockerHostNetwork=true -Pversion=${BUILDVERSION}
- gradle bootBuildImage --publishImage -PbuildbootDockerHostNetwork=true -Pversion=${BUILDVERSION}
- echo "BUILDVERSION=$BUILDVERSION" >> version.env
artifacts:
reports:
@@ -21,3 +21,16 @@ deploy:
- if: $CI_COMMIT_BRANCH == $CI_DEFAULT_BRANCH
- if: $CI_COMMIT_BRANCH =~ /^release/
- if: $CI_COMMIT_TAG
pages:
stage: build
tags:
- dind
script:
- echo "Generating Javadoc..."
- gradle generateJavaDoc -PjavadocDestinationDir="javadoc"
- mkdir public
- mv redaction-service-v1/redaction-service-server-v1/javadoc/* public/
artifacts:
paths:
- public
@@ -11,6 +11,10 @@ group = "com.iqser.red.service"
java.sourceCompatibility = JavaVersion.VERSION_17
java.targetCompatibility = JavaVersion.VERSION_17
pmd {
isConsoleOutput = true
}
tasks.pmdMain {
pmd.ruleSetFiles = files("${rootDir}/config/pmd/pmd.xml")
}
+3 -4
View File
@@ -9,13 +9,12 @@
</description>
<rule ref="category/java/errorprone.xml">
<exclude name="DataflowAnomalyAnalysis"/>
<exclude name="MissingSerialVersionUID"/>
<exclude name="NullAssignment"/>
<exclude name="AvoidLiteralsInIfCondition"/>
<exclude name="AvoidDuplicateLiterals"/>
<exclude name="AvoidFieldNameMatchingMethodName"/>
<exclude name="NullAssignment"/>
<exclude name="AssignmentInOperand"/>
<exclude name="BeanMembersShouldSerialize"/>
</rule>
</ruleset>
</ruleset>
+3 -5
View File
@@ -10,15 +10,13 @@
<rule ref="category/java/errorprone.xml">
<exclude name="DataflowAnomalyAnalysis"/>
<exclude name="MissingSerialVersionUID"/>
<exclude name="NullAssignment"/>
<exclude name="AvoidLiteralsInIfCondition"/>
<exclude name="AvoidDuplicateLiterals"/>
<exclude name="AvoidFieldNameMatchingMethodName"/>
<exclude name="AvoidFieldNameMatchingTypeName"/>
<exclude name="NullAssignment"/>
<exclude name="AssignmentInOperand"/>
<exclude name="TestClassWithoutTestCases"/>
<exclude name="BeanMembersShouldSerialize"/>
</rule>
</ruleset>
</ruleset>
@@ -7,7 +7,7 @@ description = "redaction-service-api-v1"
dependencies {
implementation("org.springframework:spring-web:6.0.12")
implementation("com.iqser.red.service:persistence-service-internal-api-v1:2.207.0")
implementation("com.iqser.red.service:persistence-service-internal-api-v1:2.351.0")
}
publishing {
@@ -0,0 +1,18 @@
package com.iqser.red.service.redaction.v1.model;
import java.util.List;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
@Data
@Builder
@NoArgsConstructor
@AllArgsConstructor
public class AnalyzeResponse {
private String fileId;
private List<UnprocessedManualEntity> unprocessedManualEntities;
}
@@ -0,0 +1,20 @@
package com.iqser.red.service.redaction.v1.model;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
import lombok.experimental.FieldDefaults;
@Data
@Builder
@AllArgsConstructor
@NoArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
public class DroolsSyntaxDeprecatedWarnings {
Integer line;
Integer column;
String message;
}
@@ -19,6 +19,8 @@ public class DroolsSyntaxValidation {
@Builder.Default
List<DroolsSyntaxErrorMessage> droolsSyntaxErrorMessages = new LinkedList<>();
@Builder.Default
List<DroolsSyntaxDeprecatedWarnings> droolsSyntaxDeprecatedWarnings = new LinkedList<>();
public void addErrorMessage(int line, int column, String message) {
@@ -0,0 +1,21 @@
package com.iqser.red.service.redaction.v1.model;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
@Data
@Builder
@NoArgsConstructor
@AllArgsConstructor
public class MigrationRequest {
String dossierTemplateId;
String dossierId;
String fileId;
ManualRedactions manualRedactions;
}
@@ -0,0 +1,17 @@
package com.iqser.red.service.redaction.v1.model;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
@Data
@Builder
@NoArgsConstructor
@AllArgsConstructor
public class MigrationResponse {
String dossierId;
String fileId;
}
@@ -0,0 +1,14 @@
package com.iqser.red.service.redaction.v1.model;
public class QueueNames {
public static final String REDACTION_QUEUE = "redactionQueue";
public static final String REDACTION_PRIORITY_QUEUE = "redactionPriorityQueue";
public static final String REDACTION_ANALYSIS_RESPONSE_QUEUE = "redactionAnalysisResponseQueue";
public static final String REDACTION_DQL = "redactionDQL";
public static final String MIGRATION_QUEUE = "migrationQueue";
public static final String MIGRATION_RESPONSE_QUEUE = "migrationResponseQueue";
public static final String MIGRATION_DLQ = "migrationDLQ";
}
@@ -0,0 +1,27 @@
package com.iqser.red.service.redaction.v1.model;
import java.util.ArrayList;
import java.util.List;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.EqualsAndHashCode;
import lombok.NoArgsConstructor;
@Data
@AllArgsConstructor
@NoArgsConstructor
@Builder
@EqualsAndHashCode
public class UnprocessedManualEntity {
private String annotationId;
private String textBefore;
private String textAfter;
private String section;
@Builder.Default
private List<Position> positions = new ArrayList<>();
}
@@ -3,7 +3,7 @@ import org.springframework.boot.gradle.tasks.bundling.BootBuildImage
plugins {
application
id("com.iqser.red.service.java-conventions")
id("org.springframework.boot") version "3.1.4"
id("org.springframework.boot") version "3.1.5"
id("io.spring.dependency-management") version "1.1.3"
id("org.sonarqube") version "4.4.1.3373"
id("io.freefair.lombok") version "8.4"
@@ -12,15 +12,18 @@ plugins {
description = "redaction-service-server-v1"
val layoutParserVersion = "0.71.0"
val layoutParserVersion = "0.94.0"
val jacksonVersion = "2.15.2"
val droolsVersion = "9.44.0.Final"
val pdfBoxVersion = "3.0.0"
val persistenceServiceVersion = "2.207.0"
val persistenceServiceVersion = "2.360.0"
val springBootStarterVersion = "3.1.5"
configurations {
all {
exclude(group = "org.springframework.boot", module = "spring-boot-starter-logging")
exclude(group = "commons-logging", module = "commons-logging")
exclude(group = "org.springframework.boot", module = "spring-boot-starter-log4j2")
exclude(group = "com.iqser.red.commons", module = "logging-commons")
}
}
@@ -35,7 +38,8 @@ dependencies {
implementation("com.iqser.red.commons:dictionary-merge-commons:1.5.0")
implementation("com.iqser.red.commons:storage-commons:2.45.0")
implementation("com.knecon.fforesight:tenant-commons:0.13.0")
implementation("com.knecon.fforesight:tenant-commons:0.21.0")
implementation("com.knecon.fforesight:tracing-commons:0.5.0")
implementation("com.fasterxml.jackson.module:jackson-module-afterburner:${jacksonVersion}")
implementation("com.fasterxml.jackson.datatype:jackson-datatype-jsr310:${jacksonVersion}")
@@ -49,12 +53,21 @@ dependencies {
implementation("org.locationtech.jts:jts-core:1.19.0")
implementation("org.springframework.cloud:spring-cloud-starter-openfeign:4.0.4")
implementation("org.springframework.boot:spring-boot-starter-amqp:3.1.4")
implementation("org.springframework.boot:spring-boot-starter-amqp:${springBootStarterVersion}")
implementation("org.springframework.boot:spring-boot-starter-cache:${springBootStarterVersion}")
implementation("org.springframework.boot:spring-boot-starter-data-redis:${springBootStarterVersion}")
implementation("net.logstash.logback:logstash-logback-encoder:7.4")
implementation("ch.qos.logback:logback-classic")
implementation("org.reflections:reflections:0.10.2")
testImplementation(project(":rules-management"))
testImplementation("org.apache.pdfbox:pdfbox:${pdfBoxVersion}")
testImplementation("org.apache.pdfbox:pdfbox-tools:${pdfBoxVersion}")
testImplementation("org.springframework.boot:spring-boot-starter-test:3.1.4")
testImplementation("org.springframework.boot:spring-boot-starter-test:${springBootStarterVersion}")
testImplementation("com.knecon.fforesight:viewer-doc-processor:${layoutParserVersion}")
testImplementation("com.knecon.fforesight:layoutparser-service-processor:${layoutParserVersion}") {
exclude(
group = "com.iqser.red.service",
@@ -67,15 +80,16 @@ tasks.test {
configure<JacocoTaskExtension> {
excludes = listOf("org/drools/**/*")
}
minHeapSize = "512m"
maxHeapSize = "1024m"
}
tasks.named<BootBuildImage>("bootBuildImage") {
environment.put("BPE_DELIM_JAVA_TOOL_OPTIONS", " ")
environment.put("BPE_APPEND_JAVA_TOOL_OPTIONS", "-Dfile.encoding=UTF-8")
environment.put("BPE_APPEND_JAVA_TOOL_OPTIONS", "-XX:MaxMetaspaceSize=512m -Dfile.encoding=UTF-8")
imageName.set("nexus.knecon.com:5001/red/${project.name}:${project.version}")
imageName.set("nexus.knecon.com:5001/red/${project.name}")// must build image with same name always, otherwise the builder will not know which image to use as cache. DO NOT CHANGE!
if (project.hasProperty("buildbootDockerHostNetwork")) {
network.set("host")
}
@@ -91,5 +105,45 @@ tasks.named<BootBuildImage>("bootBuildImage") {
email.set(providers.gradleProperty("mavenEmail").getOrNull())
url.set("https://nexus.knecon.com:5001/")
}
val dockerTag = "nexus.knecon.com:5001/red/${project.name}:${project.version}"
tags.set(listOf(dockerTag))
}
}
fun parseDroolsImports(droolsFilePath: String): List<String> {
val imports = mutableListOf<String>()
val importPattern = Regex("^import\\s+(com\\.iqser\\.red\\.service\\.redaction\\.v1\\.[\\w.]+);")
val desiredPrefix = "com.iqser.red.service.redaction.v1"
File(droolsFilePath).forEachLine { line ->
importPattern.find(line)?.let { matchResult ->
val importPath = matchResult.groupValues[1].trim()
if (importPath.startsWith(desiredPrefix)) {
val formattedPath = importPath.replace('.', '/')
imports.add("$formattedPath.java")
}
}
}
return imports
}
val droolsImports = parseDroolsImports("redaction-service-v1/redaction-service-server-v1/src/main/resources/drools/all_rules_documine.drl")
tasks.register("generateJavaDoc", Javadoc::class) {
dependsOn("compileJava")
dependsOn("delombok")
classpath = project.sourceSets["main"].runtimeClasspath
source = fileTree("${buildDir}/generated/sources/delombok/java/main") {
include(droolsImports)
}
destinationDir = file(project.findProperty("javadocDestinationDir")?.toString() ?: "")
options.memberLevel = JavadocMemberLevel.PUBLIC
(options as StandardJavadocDocletOptions).apply {
header = "Redaction Service ${project.version}"
footer = "Redaction Service ${project.version}"
title = "API Documentation for Redaction Service ${project.version}"
}
}
@@ -6,6 +6,7 @@ import org.springframework.boot.autoconfigure.ImportAutoConfiguration;
import org.springframework.boot.autoconfigure.SpringBootApplication;
import org.springframework.boot.autoconfigure.security.servlet.SecurityAutoConfiguration;
import org.springframework.boot.context.properties.EnableConfigurationProperties;
import org.springframework.cache.annotation.EnableCaching;
import org.springframework.cloud.openfeign.EnableFeignClients;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Import;
@@ -17,7 +18,10 @@ import com.knecon.fforesight.tenantcommons.MultiTenancyAutoConfiguration;
import io.micrometer.core.aop.TimedAspect;
import io.micrometer.core.instrument.MeterRegistry;
import io.micrometer.observation.ObservationRegistry;
import io.micrometer.observation.aop.ObservedAspect;
@EnableCaching
@ImportAutoConfiguration({MultiTenancyAutoConfiguration.class})
@Import({MetricsConfiguration.class, StorageAutoConfiguration.class})
@EnableFeignClients(basePackageClasses = RulesClient.class)
@@ -31,6 +35,10 @@ public class Application {
SpringApplication.run(Application.class, args);
}
@Bean
public ObservedAspect observedAspect(ObservationRegistry observationRegistry) {
return new ObservedAspect(observationRegistry);
}
@Bean
public TimedAspect timedAspect(MeterRegistry registry) {
@@ -38,10 +46,18 @@ public class Application {
return new TimedAspect(registry);
}
@Bean
public DictionaryMergeService dictionaryMergeService() {
return new DictionaryMergeService();
}
@Bean(initMethod = "findDeprecatedMethods")
public DeprecatedElementsFinder deprecatedElementsFinder() {
return new DeprecatedElementsFinder();
}
}
@@ -0,0 +1,108 @@
package com.iqser.red.service.redaction.v1.server;
import static java.util.stream.Collectors.groupingBy;
import java.lang.reflect.Method;
import java.lang.reflect.Type;
import java.util.Arrays;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import org.reflections.Reflections;
import org.reflections.scanners.Scanners;
import org.reflections.util.ConfigurationBuilder;
import com.iqser.red.service.redaction.v1.server.model.dictionary.SearchImplementation;
import lombok.Getter;
import lombok.extern.slf4j.Slf4j;
@Slf4j
public class DeprecatedElementsFinder {
public static final String PACKAGE_NAME = "com.iqser.red.service.redaction.v1.server";
private Set<Method> deprecatedMethods;
@Getter
private Map<String, String> deprecatedMethodsSignaturesMap;
private Set<Class<?>> deprecatedClasses;
@Getter
private SearchImplementation classesSearchImplementation;
@Getter
private SearchImplementation methodsSearchImplementation;
public void findDeprecatedMethods() {
deprecatedMethods = new HashSet<>();
deprecatedClasses = new HashSet<>();
deprecatedMethodsSignaturesMap = new HashMap<>();
Reflections reflections = new Reflections(new ConfigurationBuilder().forPackage(PACKAGE_NAME)
.setExpandSuperTypes(true)
.setScanners(Scanners.MethodsAnnotated, Scanners.TypesAnnotated, Scanners.SubTypes));
deprecatedMethods = reflections.get(Scanners.MethodsAnnotated.with(Deprecated.class).as(Method.class));
deprecatedClasses = reflections.get(Scanners.TypesAnnotated.with(Deprecated.class).asClass());
if (!deprecatedClasses.isEmpty()) {
deprecatedClasses.forEach(deprecatedType -> deprecatedMethods.addAll(Arrays.stream(deprecatedType.getDeclaredMethods())
.collect(Collectors.toSet())));
classesSearchImplementation = new SearchImplementation(deprecatedClasses.stream()
.map(Class::getName)
.collect(Collectors.toSet()), false);
}
if (!deprecatedMethods.isEmpty()) {
methodsSearchImplementation = new SearchImplementation(deprecatedMethods.stream()
.map(Method::getName)
.collect(Collectors.toSet()), false);
deprecatedMethodsSignaturesMap = new HashMap<>();
Map<String, List<Method>> deprecatedMethodsNameMap = deprecatedMethods.stream()
.collect(groupingBy(Method::getName));
for (String deprecatedMethod : deprecatedMethodsNameMap.keySet()) {
deprecatedMethodsSignaturesMap.computeIfAbsent(deprecatedMethod,
key -> deprecatedMethodsNameMap.get(deprecatedMethod)
.stream()
.map(this::getMethodSignature)
.collect(Collectors.joining("\n")));
}
}
log.info("For package: {} found deprecated classes {} deprecated methods {}", PACKAGE_NAME, deprecatedClasses.size(), deprecatedMethods.size());
}
public Set<Method> getDeprecatedMethods() {
if (this.deprecatedMethods == null) {
findDeprecatedMethods();
}
return this.deprecatedMethods;
}
public Set<Class<?>> getDeprecatedClasses() {
if (this.deprecatedClasses == null) {
findDeprecatedMethods();
}
return this.deprecatedClasses;
}
private String getMethodSignature(Method method) {
String methodName = method.getName();
String parameterTypes = Arrays.stream(method.getGenericParameterTypes())
.map(Type::getTypeName)
.collect(Collectors.joining(", "));
return method.getGenericReturnType() + " " + methodName + "(" + parameterTypes + ")";
}
}
@@ -0,0 +1,31 @@
package com.iqser.red.service.redaction.v1.server;
import java.time.Duration;
import org.springframework.boot.autoconfigure.cache.RedisCacheManagerBuilderCustomizer;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
import org.springframework.data.redis.cache.RedisCacheConfiguration;
import org.springframework.data.redis.connection.RedisConnectionFactory;
import org.springframework.data.redis.core.RedisTemplate;
@Configuration
public class RedisCachingConfiguration {
@Bean
public RedisCacheManagerBuilderCustomizer redisCacheManagerBuilderCustomizer() {
return (builder) -> builder.withCacheConfiguration("documentDataCache",
RedisCacheConfiguration.defaultCacheConfig().entryTtl(Duration.ofMinutes(30)).disableCachingNullValues());
}
@Bean
public RedisTemplate<String, Object> redisTemplate(RedisConnectionFactory connectionFactory) {
RedisTemplate<String, Object> template = new RedisTemplate<>();
template.setConnectionFactory(connectionFactory);
return template;
}
}
@@ -0,0 +1,428 @@
package com.iqser.red.service.redaction.v1.server.migration;
import java.time.OffsetDateTime;
import java.util.ArrayList;
import java.util.Collections;
import java.util.HashSet;
import java.util.List;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.AnnotationStatus;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualForceRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Change;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Point;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import lombok.AllArgsConstructor;
import lombok.Data;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@RequiredArgsConstructor
public class LegacyRedactionLogMergeService {
private final DictionaryService dictionaryService;
public RedactionLog addManualAddEntriesAndRemoveSkippedImported(RedactionLog redactionLog, ManualRedactions manualRedactions, String dossierTemplateId) {
Set<String> skippedImportedRedactions = new HashSet<>();
log.info("Adding manual add Entries and removing skipped or imported entries");
if (manualRedactions != null) {
var manualRedactionLogEntries = addManualAddEntries(manualRedactions.getEntriesToAdd(), redactionLog.getAnalysisNumber());
redactionLog.getRedactionLogEntry().addAll(manualRedactionLogEntries);
var manualRedactionWrappers = createManualRedactionWrappers(manualRedactions);
for (RedactionLogEntry entry : redactionLog.getRedactionLogEntry()) {
if (entry.isImported()) {
processRedactionLogEntry(manualRedactionWrappers.stream()
.filter(ManualRedactionWrapper::isApproved)
.filter(mr -> entry.getId().equals(mr.getId()))
.collect(Collectors.toList()), entry, dossierTemplateId);
if (!entry.isRedacted()) {
skippedImportedRedactions.add(entry.getId());
}
}
}
}
Set<String> processedIds = new HashSet<>();
redactionLog.getRedactionLogEntry().removeIf(entry -> {
if (entry.isFalsePositive()) {
return true;
}
if (entry.getImportedRedactionIntersections() != null) {
entry.getImportedRedactionIntersections().removeAll(skippedImportedRedactions);
if (!entry.getImportedRedactionIntersections().isEmpty() && (!entry.isImage() || entry.isImage() && !(entry.getType().equals("image") || entry.getType()
.equals("ocr")))) {
return true;
}
}
if (processedIds.contains(entry.getId())) {
log.info("Duplicate annotation found with id {}", entry.getId());
return true;
}
processedIds.add(entry.getId());
return false;
});
return redactionLog;
}
public long getNumberOfAffectedAnnotations(ManualRedactions manualRedactions) {
return createManualRedactionWrappers(manualRedactions).stream().map(ManualRedactionWrapper::getId).distinct().count();
}
private List<ManualRedactionWrapper> createManualRedactionWrappers(ManualRedactions manualRedactions) {
List<ManualRedactionWrapper> manualRedactionWrappers = new ArrayList<>();
manualRedactions.getRecategorizations()
.forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getIdsToRemove()
.forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getForceRedactions()
.forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getLegalBasisChanges()
.forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
manualRedactions.getResizeRedactions()
.forEach(item -> {
if (item.getSoftDeletedTime() == null) {
manualRedactionWrappers.add(new ManualRedactionWrapper(item.getAnnotationId(), item.getRequestDate(), item, item.isApproved()));
}
});
Collections.sort(manualRedactionWrappers);
return manualRedactionWrappers;
}
private void processRedactionLogEntry(List<ManualRedactionWrapper> manualRedactionWrappers, RedactionLogEntry redactionLogEntry, String dossierTemplateId) {
manualRedactionWrappers.forEach(mrw -> {
Object item = mrw.getItem();
if (item instanceof ManualRecategorization imageRecategorization) {
processManualImageRecategorization(redactionLogEntry, dossierTemplateId, imageRecategorization);
}
if (item instanceof IdRemoval manualRemoval) {
processIdRemoval(redactionLogEntry, manualRemoval);
}
if (item instanceof ManualForceRedaction manualForceRedact) {
processManualForceRedaction(redactionLogEntry, dossierTemplateId, manualForceRedact);
}
if (item instanceof ManualLegalBasisChange manualLegalBasisChange) {
processManualLegalBasisChange(redactionLogEntry, manualLegalBasisChange);
}
if (item instanceof ManualResizeRedaction manualResizeRedact) {
processManualResizeRedaction(redactionLogEntry, manualResizeRedact);
}
});
}
private void processManualImageRecategorization(RedactionLogEntry redactionLogEntry, String dossierTemplateId, ManualRecategorization imageRecategorization) {
String manualOverrideReason = null;
if (imageRecategorization.getStatus().equals(AnnotationStatus.APPROVED)) {
redactionLogEntry.setType(imageRecategorization.getType());
redactionLogEntry.setSection("Image:" + redactionLogEntry.getType());
if (dictionaryService.isHint(imageRecategorization.getType(), dossierTemplateId)) {
redactionLogEntry.setRedacted(false);
redactionLogEntry.setHint(true);
} else {
redactionLogEntry.setHint(false);
}
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", recategorized by manual override");
} else if (imageRecategorization.getStatus().equals(AnnotationStatus.REQUESTED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", requested to recategorize");
}
if (manualOverrideReason != null) {
redactionLogEntry.setReason(manualOverrideReason);
}
redactionLogEntry.getManualChanges()
.add(ManualChange.from(imageRecategorization).withManualRedactionType(ManualRedactionType.RECATEGORIZE).withChange("type", imageRecategorization.getType()));
}
private String mergeReasonIfNecessary(String currentReason, String addition) {
if (currentReason != null) {
if (!currentReason.contains(addition)) {
return currentReason + addition;
}
return currentReason;
} else {
return "";
}
}
private void processIdRemoval(RedactionLogEntry redactionLogEntry, IdRemoval manualRemoval) {
boolean isApprovedRedaction = manualRemoval.getStatus().equals(AnnotationStatus.APPROVED);
if (isApprovedRedaction && manualRemoval.isRemoveFromDictionary() && isBasedOnDictionaryOnly(redactionLogEntry)) {
log.debug("Skipping merge for dictionary-modifying entry");
} else {
String manualOverrideReason = null;
if (isApprovedRedaction) {
redactionLogEntry.setRedacted(false);
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", removed by manual override");
redactionLogEntry.setHint(false);
} else if (manualRemoval.getStatus().equals(AnnotationStatus.REQUESTED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", requested to remove");
}
if (manualOverrideReason != null) {
redactionLogEntry.setReason(manualOverrideReason);
}
}
redactionLogEntry.getManualChanges()
.add(ManualChange.from(manualRemoval)
.withManualRedactionType(manualRemoval.isRemoveFromDictionary() ? ManualRedactionType.REMOVE_FROM_DICTIONARY : ManualRedactionType.REMOVE_LOCALLY));
}
private boolean isBasedOnDictionaryOnly(RedactionLogEntry redactionLogEntry) {
return redactionLogEntry.getEngines().contains(Engine.DICTIONARY) && redactionLogEntry.getEngines().size() == 1;
}
private void processManualForceRedaction(RedactionLogEntry redactionLogEntry, String dossierTemplateId, ManualForceRedaction manualForceRedact) {
String manualOverrideReason = null;
var dictionaryIsHint = dictionaryService.isHint(redactionLogEntry.getType(), dossierTemplateId);
if (manualForceRedact.getStatus().equals(AnnotationStatus.APPROVED)) {
// Forcing a skipped hint should result in a hint
if (dictionaryIsHint) {
redactionLogEntry.setHint(true);
} else {
redactionLogEntry.setRedacted(true);
}
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", forced by manual override");
redactionLogEntry.setLegalBasis(manualForceRedact.getLegalBasis());
} else if (manualForceRedact.getStatus().equals(AnnotationStatus.REQUESTED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", requested to force " + (dictionaryIsHint ? "hint" : "redact"));
redactionLogEntry.setLegalBasis(manualForceRedact.getLegalBasis());
}
if (manualOverrideReason != null) {
redactionLogEntry.setReason(manualOverrideReason);
}
var manualChange = ManualChange.from(manualForceRedact).withManualRedactionType(dictionaryIsHint ? ManualRedactionType.FORCE_HINT : ManualRedactionType.FORCE_REDACT);
redactionLogEntry.getManualChanges().add(manualChange);
}
private void processManualLegalBasisChange(RedactionLogEntry redactionLogEntry, ManualLegalBasisChange manualLegalBasisChange) {
String manualOverrideReason = null;
if (manualLegalBasisChange.getStatus().equals(AnnotationStatus.APPROVED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", legal basis was manually changed");
redactionLogEntry.setLegalBasis(manualLegalBasisChange.getLegalBasis());
redactionLogEntry.setRedacted(true);
if (manualLegalBasisChange.getSection() != null) {
redactionLogEntry.setSection(manualLegalBasisChange.getSection());
}
if (redactionLogEntry.isRectangle() && manualLegalBasisChange.getValue() != null) {
redactionLogEntry.setValue(manualLegalBasisChange.getValue());
}
} else if (manualLegalBasisChange.getStatus().equals(AnnotationStatus.REQUESTED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", legal basis change requested");
}
if (manualOverrideReason != null) {
redactionLogEntry.setReason(manualOverrideReason);
}
var manualChange = ManualChange.from(manualLegalBasisChange).withManualRedactionType(ManualRedactionType.LEGAL_BASIS_CHANGE);
manualChange.withChange("legalBasis", manualLegalBasisChange.getLegalBasis());
if (manualLegalBasisChange.getSection() != null) {
manualChange.withChange("section", manualLegalBasisChange.getSection());
}
if (redactionLogEntry.isRectangle() && manualLegalBasisChange.getValue() != null) {
manualChange.withChange("value", manualLegalBasisChange.getValue());
}
redactionLogEntry.getManualChanges().add(manualChange);
}
private void processManualResizeRedaction(RedactionLogEntry redactionLogEntry, ManualResizeRedaction manualResizeRedact) {
String manualOverrideReason = null;
if (manualResizeRedact.getStatus().equals(AnnotationStatus.APPROVED)) {
redactionLogEntry.setPositions(convertPositions(manualResizeRedact.getPositions()));
if (!"signature".equalsIgnoreCase(redactionLogEntry.getType()) && !"logo".equalsIgnoreCase(redactionLogEntry.getType())) {
redactionLogEntry.setValue(manualResizeRedact.getValue());
}
// This is for backwards compatibility, now the text after/before is calculated during reanalysis because we need to find dict entries on positions where entries are resized to smaller.
if (manualResizeRedact.getTextBefore() != null || manualResizeRedact.getTextAfter() != null) {
redactionLogEntry.setTextBefore(manualResizeRedact.getTextBefore());
redactionLogEntry.setTextAfter(manualResizeRedact.getTextAfter());
}
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", resized by manual override");
} else if (manualResizeRedact.getStatus().equals(AnnotationStatus.REQUESTED)) {
manualOverrideReason = mergeReasonIfNecessary(redactionLogEntry.getReason(), ", requested to resize redact");
redactionLogEntry.setPositions(convertPositions(manualResizeRedact.getPositions()));
// This is for backwards compatibility, now the text after/before is calculated during reanalysis because we need to find dict entries on positions where entries are resized to smaller.
if (manualResizeRedact.getTextBefore() != null || manualResizeRedact.getTextAfter() != null) {
redactionLogEntry.setTextBefore(manualResizeRedact.getTextBefore());
redactionLogEntry.setTextAfter(manualResizeRedact.getTextAfter());
}
}
redactionLogEntry.setReason(manualOverrideReason);
redactionLogEntry.getManualChanges()
.add(ManualChange.from(manualResizeRedact).withManualRedactionType(ManualRedactionType.RESIZE).withChange("value", manualResizeRedact.getValue()));
}
public List<RedactionLogEntry> addManualAddEntries(Set<ManualRedactionEntry> manualAdds, int analysisNumber) {
List<RedactionLogEntry> redactionLogEntries = new ArrayList<>();
for (ManualRedactionEntry manualRedactionEntry : manualAdds) {
if (shouldCreateManualEntry(manualRedactionEntry)) {
RedactionLogEntry redactionLogEntry = createRedactionLogEntry(manualRedactionEntry, manualRedactionEntry.getAnnotationId(), analysisNumber);
redactionLogEntry.setPositions(convertPositions(manualRedactionEntry.getPositions()));
redactionLogEntry.setTextBefore(manualRedactionEntry.getTextBefore());
redactionLogEntry.setTextAfter(manualRedactionEntry.getTextAfter());
redactionLogEntries.add(redactionLogEntry);
}
}
return redactionLogEntries;
}
private List<Rectangle> convertPositions(List<com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Rectangle> positions) {
return positions.stream()
.map(pos -> new Rectangle(new Point(pos.getTopLeftX(), pos.getTopLeftY()), pos.getWidth(), pos.getHeight(), pos.getPage()))
.collect(Collectors.toList());
}
@SuppressWarnings("PMD.UselessParentheses")
private boolean shouldCreateManualEntry(ManualRedactionEntry manualRedactionEntry) {
if (!manualRedactionEntry.isApproved()) {
return false;
}
return (!manualRedactionEntry.isAddToDictionary() && !manualRedactionEntry.isAddToDossierDictionary()) || ((manualRedactionEntry.isAddToDictionary()
|| manualRedactionEntry.isAddToDossierDictionary())
&& manualRedactionEntry.getProcessedDate() == null);
}
private RedactionLogEntry createRedactionLogEntry(ManualRedactionEntry manualRedactionEntry, String id, int analysisNumber) {
var addToDictionary = manualRedactionEntry.isAddToDictionary() || manualRedactionEntry.isAddToDossierDictionary();
var change = ManualChange.from(manualRedactionEntry).withManualRedactionType(addToDictionary ? ManualRedactionType.ADD_TO_DICTIONARY : ManualRedactionType.ADD_LOCALLY);
List<ManualChange> changeList = new ArrayList<>();
changeList.add(change);
return RedactionLogEntry.builder()
.id(id)
.reason(manualRedactionEntry.getReason())
.isDictionaryEntry(manualRedactionEntry.isAddToDictionary())
.isDossierDictionaryEntry(manualRedactionEntry.isAddToDossierDictionary())
.legalBasis(manualRedactionEntry.getLegalBasis())
.value(manualRedactionEntry.getValue())
.sourceId(manualRedactionEntry.getSourceId())
.section(manualRedactionEntry.getSection())
.type(manualRedactionEntry.getType())
.redacted(true)
.isHint(false)
.sectionNumber(-1)
.rectangle(manualRedactionEntry.isRectangle())
.manualChanges(changeList)
.changes(List.of(new Change(analysisNumber + 1, ChangeType.ADDED, manualRedactionEntry.getRequestDate())))
.build();
}
@Data
@AllArgsConstructor
private static class ManualRedactionWrapper implements Comparable<ManualRedactionWrapper> {
private String id;
private OffsetDateTime date;
private Object item;
private boolean approved;
@Override
public int compareTo(ManualRedactionWrapper o) {
return this.date.compareTo(o.date);
}
}
}
@@ -0,0 +1,70 @@
package com.iqser.red.service.redaction.v1.server.migration;
import java.lang.reflect.Field;
import java.util.Comparator;
import java.util.LinkedList;
import java.util.List;
import java.util.Map;
import java.util.stream.Collectors;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import lombok.SneakyThrows;
@Service
@SuppressWarnings("PMD")
public class LegacyVersion0MigrationService {
public RedactionLog mergeDuplicateAnnotationIds(RedactionLog redactionLog) {
List<RedactionLogEntry> mergedEntries = new LinkedList<>();
Map<String, List<RedactionLogEntry>> entriesById = redactionLog.getRedactionLogEntry().stream().collect(Collectors.groupingBy(RedactionLogEntry::getId));
for (List<RedactionLogEntry> entries : entriesById.values()) {
if (entries.isEmpty()) {
continue;
}
if (entries.size() == 1) {
mergedEntries.add(entries.get(0));
continue;
}
List<RedactionLogEntry> sortedEntries = entries.stream().sorted(Comparator.comparing(entry -> entry.getChanges().get(0).getDateTime())).toList();
RedactionLogEntry initialEntry = sortedEntries.get(0);
for (RedactionLogEntry entry : sortedEntries.subList(1, sortedEntries.size())) {
copyNonNullFields(entry, initialEntry);
}
mergedEntries.add(initialEntry);
}
redactionLog.setRedactionLogEntry(mergedEntries);
return redactionLog;
}
@SneakyThrows
public static void copyNonNullFields(RedactionLogEntry source, RedactionLogEntry destination) {
if (source == null || destination == null) {
throw new IllegalArgumentException("Source and destination objects must not be null");
}
Class<?> sourceClass = source.getClass();
Field[] sourceFields = sourceClass.getDeclaredFields();
for (Field field : sourceFields) {
field.setAccessible(true);
Object value = field.get(source);
if (value != null) {
field.set(destination, value);
}
}
}
}
@@ -0,0 +1,93 @@
package com.iqser.red.service.redaction.v1.server.migration;
import java.util.Collections;
import java.util.List;
import java.util.Set;
import java.util.stream.Collectors;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Change;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
public class MigrationMapper {
public static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change toEntityLogChanges(Change change) {
return new com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change(change.getAnalysisNumber(),
toEntityLogType(change.getType()),
change.getDateTime());
}
public static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange toEntityLogManualChanges(com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualChange manualChange) {
return new com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange(toManualRedactionType(manualChange.getManualRedactionType()),
manualChange.getProcessedDate(),
manualChange.getRequestedDate(),
manualChange.getUserId(),
manualChange.getPropertyChanges());
}
public static ChangeType toEntityLogType(com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ChangeType type) {
return switch (type) {
case ADDED -> ChangeType.ADDED;
case REMOVED -> ChangeType.REMOVED;
case CHANGED -> ChangeType.CHANGED;
};
}
public static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType toManualRedactionType(ManualRedactionType manualRedactionType) {
return switch (manualRedactionType) {
case ADD_LOCALLY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.ADD;
case ADD_TO_DICTIONARY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.ADD_TO_DICTIONARY;
case REMOVE_LOCALLY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.REMOVE;
case REMOVE_FROM_DICTIONARY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.REMOVE_FROM_DICTIONARY;
case FORCE_REDACT -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.FORCE;
case FORCE_HINT -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.FORCE;
case RECATEGORIZE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.RECATEGORIZE;
case LEGAL_BASIS_CHANGE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.LEGAL_BASIS_CHANGE;
case RESIZE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.RESIZE;
};
}
public static com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine toEntityLogEngine(Engine engine) {
return switch (engine) {
case DICTIONARY -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine.DICTIONARY;
case NER -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine.NER;
case RULE -> com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine.RULE;
};
}
public static Set<com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine> getMigratedEngines(RedactionLogEntry entry) {
if (entry.getEngines() == null) {
return Collections.emptySet();
}
return entry.getEngines()
.stream()
.map(MigrationMapper::toEntityLogEngine)
.collect(Collectors.toSet());
}
public List<ManualChange> migrateManualChanges(List<com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualChange> manualChanges) {
if (manualChanges == null) {
return Collections.emptyList();
}
return manualChanges.stream()
.map(MigrationMapper::toEntityLogManualChanges)
.toList();
}
}
@@ -0,0 +1,93 @@
package com.iqser.red.service.redaction.v1.server.migration;
import static com.iqser.red.service.redaction.v1.model.QueueNames.MIGRATION_QUEUE;
import static com.iqser.red.service.redaction.v1.model.QueueNames.MIGRATION_RESPONSE_QUEUE;
import org.springframework.amqp.core.Message;
import org.springframework.amqp.rabbit.annotation.RabbitHandler;
import org.springframework.amqp.rabbit.annotation.RabbitListener;
import org.springframework.amqp.rabbit.core.RabbitTemplate;
import org.springframework.stereotype.Service;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.dossier.file.FileType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
import com.iqser.red.service.redaction.v1.model.MigrationRequest;
import com.iqser.red.service.redaction.v1.model.MigrationResponse;
import com.iqser.red.service.redaction.v1.server.model.MigratedEntityLog;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import com.iqser.red.service.redaction.v1.server.service.document.DocumentGraphMapper;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import lombok.AccessLevel;
import lombok.RequiredArgsConstructor;
import lombok.SneakyThrows;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@RequiredArgsConstructor
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
public class MigrationMessageReceiver {
ObjectMapper objectMapper;
RedactionLogToEntityLogMigrationService redactionLogToEntityLogMigrationService;
RedactionStorageService redactionStorageService;
LegacyRedactionLogMergeService legacyRedactionLogMergeService;
LegacyVersion0MigrationService legacyVersion0MigrationService;
RabbitTemplate rabbitTemplate;
DictionaryService dictionaryService;
@SneakyThrows
@RabbitHandler
@RabbitListener(queues = MIGRATION_QUEUE)
public void receiveMigrationRequest(Message message) {
MigrationRequest migrationRequest = objectMapper.readValue(message.getBody(), MigrationRequest.class);
log.info("--------------------------------------------------------------------");
log.info("Starting redactionLog to entityLog migration for dossierId {} and fileId {}", migrationRequest.getDossierId(), migrationRequest.getFileId());
dictionaryService.updateDictionary(migrationRequest.getDossierTemplateId(), migrationRequest.getDossierId());
Document document = DocumentGraphMapper.toDocumentGraph(redactionStorageService.getDocumentData(migrationRequest.getDossierId(), migrationRequest.getFileId()));
RedactionLog redactionLog = redactionStorageService.getRedactionLog(migrationRequest.getDossierId(), migrationRequest.getFileId());
if (redactionLog.getAnalysisVersion() == 0) {
redactionLog = legacyVersion0MigrationService.mergeDuplicateAnnotationIds(redactionLog);
} else if (migrationRequest.getManualRedactions() != null) {
redactionLog = legacyRedactionLogMergeService.addManualAddEntriesAndRemoveSkippedImported(redactionLog,
migrationRequest.getManualRedactions(),
migrationRequest.getDossierTemplateId());
}
MigratedEntityLog migratedEntityLog = redactionLogToEntityLogMigrationService.migrate(redactionLog,
document,
migrationRequest.getDossierTemplateId(),
migrationRequest.getManualRedactions(),
migrationRequest.getFileId());
log.info("Storing migrated entityLog and ids to migrate in DB for file {}", migrationRequest.getFileId());
redactionStorageService.storeObject(migrationRequest.getDossierId(), migrationRequest.getFileId(), FileType.ENTITY_LOG, migratedEntityLog.getEntityLog());
redactionStorageService.storeObject(migrationRequest.getDossierId(), migrationRequest.getFileId(), FileType.MIGRATED_IDS, migratedEntityLog.getMigratedIds());
sendFinished(MigrationResponse.builder().dossierId(migrationRequest.getDossierId()).fileId(migrationRequest.getFileId()).build());
log.info("Migrated {} redactionLog entries, found {} annotation ids for migration in the db, {} new manual entries, for dossierId {} and fileId {}",
migratedEntityLog.getEntityLog().getEntityLogEntry().size(),
migratedEntityLog.getMigratedIds().getMappings().size(),
migratedEntityLog.getMigratedIds().getManualRedactionEntriesToAdd().size(),
migrationRequest.getDossierId(),
migrationRequest.getFileId());
log.info("");
}
@SneakyThrows
public void sendFinished(MigrationResponse migrationResponse) {
rabbitTemplate.convertAndSend(MIGRATION_RESPONSE_QUEUE, migrationResponse);
}
}
@@ -0,0 +1,290 @@
package com.iqser.red.service.redaction.v1.server.migration;
import java.awt.geom.Rectangle2D;
import java.util.Collection;
import java.util.Collections;
import java.util.Comparator;
import java.util.LinkedList;
import java.util.List;
import java.util.Map;
import java.util.Optional;
import java.util.function.Function;
import java.util.stream.Collectors;
import java.util.stream.Stream;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogLegalBasis;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.migration.MigratedIds;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogLegalBasis;
import com.iqser.red.service.redaction.v1.server.model.MigratedEntityLog;
import com.iqser.red.service.redaction.v1.server.model.MigrationEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.RectangleWithPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Image;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.ImageType;
import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import com.iqser.red.service.redaction.v1.server.service.ManualChangesApplicationService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityEnrichmentService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityFindingUtility;
import com.iqser.red.service.redaction.v1.server.service.document.EntityFromPrecursorCreationService;
import com.iqser.red.service.redaction.v1.server.utils.IdBuilder;
import com.iqser.red.service.redaction.v1.server.utils.MigratedIdsCollector;
import lombok.AccessLevel;
import lombok.RequiredArgsConstructor;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@RequiredArgsConstructor
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
//TODO: remove this, once the migration is done
public class RedactionLogToEntityLogMigrationService {
private static final double MATCH_THRESHOLD = 10;
EntityFindingUtility entityFindingUtility;
EntityEnrichmentService entityEnrichmentService;
DictionaryService dictionaryService;
ManualChangesApplicationService manualChangesApplicationService;
public MigratedEntityLog migrate(RedactionLog redactionLog, Document document, String dossierTemplateId, ManualRedactions manualRedactions, String fileId) {
log.info("Migrating entities for file {}", fileId);
List<MigrationEntity> entitiesToMigrate = calculateMigrationEntitiesFromRedactionLog(redactionLog, document, dossierTemplateId, fileId);
MigratedIds migratedIds = entitiesToMigrate.stream()
.collect(new MigratedIdsCollector());
applyManualChanges(entitiesToMigrate, manualRedactions);
log.info("applying manual changes to migrated entities for file {}", fileId);
EntityLog entityLog = new EntityLog();
entityLog.setAnalysisNumber(redactionLog.getAnalysisNumber());
entityLog.setRulesVersion(redactionLog.getRulesVersion());
entityLog.setDictionaryVersion(redactionLog.getDictionaryVersion());
entityLog.setDossierDictionaryVersion(redactionLog.getDossierDictionaryVersion());
entityLog.setLegalBasisVersion(redactionLog.getLegalBasisVersion());
entityLog.setAnalysisVersion(redactionLog.getAnalysisVersion());
entityLog.setLegalBasis(redactionLog.getLegalBasis()
.stream()
.map(RedactionLogToEntityLogMigrationService::toEntityLogLegalBasis)
.toList());
Map<String, String> oldToNewIDMapping = migratedIds.buildOldToNewMapping();
log.info("Writing migrated entities to entityLog for file {}", fileId);
entityLog.setEntityLogEntry(entitiesToMigrate.stream()
.map(migrationEntity -> migrationEntity.toEntityLogEntry(oldToNewIDMapping))
.toList());
if (getNumberOfApprovedEntries(redactionLog) != entityLog.getEntityLogEntry().size()) {
String message = String.format("Not all entities have been found during the migration redactionLog has %d entries and new entityLog %d",
redactionLog.getRedactionLogEntry().size(),
entityLog.getEntityLogEntry().size());
log.error(message);
throw new AssertionError(message);
}
MigratedIds idsToMigrateInDb = entitiesToMigrate.stream()
.filter(MigrationEntity::hasManualChangesOrComments)
.filter(m -> !m.getOldId().equals(m.getNewId()))
.collect(new MigratedIdsCollector());
List<ManualRedactionEntry> manualRedactionEntriesToAdd = entitiesToMigrate.stream()
.filter(MigrationEntity::needsManualEntry)
.map(MigrationEntity::buildManualRedactionEntry)
.toList();
idsToMigrateInDb.setManualRedactionEntriesToAdd(manualRedactionEntriesToAdd);
return new MigratedEntityLog(idsToMigrateInDb, entityLog);
}
private void applyManualChanges(List<MigrationEntity> entitiesToMigrate, ManualRedactions manualRedactions) {
if (manualRedactions == null) {
return;
}
Map<String, List<BaseAnnotation>> manualChangesPerAnnotationId = Stream.of(manualRedactions.getIdsToRemove(),
manualRedactions.getEntriesToAdd(),
manualRedactions.getForceRedactions(),
manualRedactions.getResizeRedactions(),
manualRedactions.getLegalBasisChanges(),
manualRedactions.getRecategorizations())
.flatMap(Collection::stream)
.collect(Collectors.groupingBy(BaseAnnotation::getAnnotationId));
entitiesToMigrate.forEach(migrationEntity -> migrationEntity.applyManualChanges(manualChangesPerAnnotationId.getOrDefault(migrationEntity.getOldId(),
Collections.emptyList()),
manualChangesApplicationService));
}
private static long getNumberOfApprovedEntries(RedactionLog redactionLog) {
return redactionLog.getRedactionLogEntry().size();
}
private List<MigrationEntity> calculateMigrationEntitiesFromRedactionLog(RedactionLog redactionLog, Document document, String dossierTemplateId, String fileId) {
List<MigrationEntity> images = getImageBasedMigrationEntities(redactionLog, document, fileId);
List<MigrationEntity> textMigrationEntities = getTextBasedMigrationEntities(redactionLog, document, dossierTemplateId, fileId);
return Stream.of(textMigrationEntities.stream(), images.stream())
.flatMap(Function.identity())
.toList();
}
private static EntityLogLegalBasis toEntityLogLegalBasis(RedactionLogLegalBasis redactionLogLegalBasis) {
return new EntityLogLegalBasis(redactionLogLegalBasis.getName(), redactionLogLegalBasis.getDescription(), redactionLogLegalBasis.getReason());
}
private List<MigrationEntity> getImageBasedMigrationEntities(RedactionLog redactionLog, Document document, String fileId) {
List<Image> images = document.streamAllImages()
.collect(Collectors.toList());
List<RedactionLogEntry> redactionLogImages = redactionLog.getRedactionLogEntry()
.stream()
.filter(RedactionLogEntry::isImage)
.toList();
List<MigrationEntity> migrationEntities = new LinkedList<>();
for (RedactionLogEntry redactionLogImage : redactionLogImages) {
List<RectangleWithPage> imagePositions = redactionLogImage.getPositions()
.stream()
.map(RectangleWithPage::fromRedactionLogRectangle)
.toList();
assert imagePositions.size() == 1;
Optional<Image> optionalClosestImage = images.stream()
.filter(image -> image.onPage(redactionLogImage.getPositions()
.get(0).getPage()))
.min(Comparator.comparingDouble(image -> EntityFindingUtility.calculateDistance(image.getPosition(), imagePositions.get(0).rectangle2D())))
.filter(image -> EntityFindingUtility.calculateDistance(image.getPosition(), imagePositions.get(0).rectangle2D()) <= MATCH_THRESHOLD);
Image closestImage;
if (optionalClosestImage.isEmpty()) { // if no fitting image can be found create a new one with the previous values!
closestImage = buildImageDirectly(document, redactionLogImage);
} else {
closestImage = optionalClosestImage.get();
images.remove(closestImage);
}
String ruleIdentifier;
String reason = Optional.ofNullable(redactionLogImage.getReason())
.orElse("");
if (redactionLogImage.getMatchedRule().isBlank() || redactionLogImage.getMatchedRule() == null) {
ruleIdentifier = "OLDIMG.0.0";
} else {
ruleIdentifier = "OLDIMG." + redactionLogImage.getMatchedRule() + ".0";
}
if (redactionLogImage.lastChangeIsRemoved()) {
closestImage.remove(ruleIdentifier, reason);
} else if (redactionLogImage.isRedacted()) {
closestImage.apply(ruleIdentifier, reason, redactionLogImage.getLegalBasis());
} else {
closestImage.skip(ruleIdentifier, reason);
}
migrationEntities.add(MigrationEntity.fromRedactionLogImage(redactionLogImage, closestImage, fileId));
}
return migrationEntities;
}
private static Image buildImageDirectly(Document document, RedactionLogEntry redactionLogImage) {
Image image = Image.builder()
.documentTree(document.getDocumentTree())
.imageType(ImageType.fromString(redactionLogImage.getType()))
.transparent(redactionLogImage.isImageHasTransparency())
.page(document.getPages()
.stream()
.filter(p -> p.getNumber() == redactionLogImage.getPositions()
.get(0).getPage())
.findFirst()
.orElseThrow())
.position(toRectangle2D(redactionLogImage.getPositions()
.get(0)))
.build();
List<Integer> treeId = document.getDocumentTree().createNewMainEntryAndReturnId(image);
image.setTreeId(treeId);
image.setId(IdBuilder.buildId(image.getPages(),
image.getBBox().values()
.stream()
.toList(),
"",
""));
return image;
}
private static Rectangle2D toRectangle2D(Rectangle rect) {
return new Rectangle2D.Double(rect.getTopLeft().getX(), rect.getTopLeft().getY(), rect.getWidth(), rect.getHeight());
}
private List<MigrationEntity> getTextBasedMigrationEntities(RedactionLog redactionLog, Document document, String dossierTemplateId, String fileId) {
List<MigrationEntity> entitiesToMigrate = redactionLog.getRedactionLogEntry()
.stream()
.filter(redactionLogEntry -> !redactionLogEntry.isImage())
.map(entry -> MigrationEntity.fromRedactionLogEntry(entry, dictionaryService.isHint(entry.getType(), dossierTemplateId), fileId))
.toList();
List<PrecursorEntity> precursorEntities = entitiesToMigrate.stream()
.map(MigrationEntity::getPrecursorEntity)
.toList();
log.info("Finding all possible entities");
Map<String, List<TextEntity>> tempEntitiesByValue = entityFindingUtility.findAllPossibleEntitiesAndGroupByValue(document, precursorEntities);
for (MigrationEntity migrationEntity : entitiesToMigrate) {
Optional<TextEntity> optionalTextEntity = entityFindingUtility.findClosestEntityAndReturnEmptyIfNotFound(migrationEntity.getPrecursorEntity(),
tempEntitiesByValue,
MATCH_THRESHOLD);
if (optionalTextEntity.isEmpty()) {
migrationEntity.setMigratedEntity(migrationEntity.getPrecursorEntity());
migrationEntity.setOldId(migrationEntity.getPrecursorEntity().getId());
migrationEntity.setNewId(migrationEntity.getPrecursorEntity().getId());
continue;
}
TextEntity migratedEntity = EntityFromPrecursorCreationService.createCorrectEntity(migrationEntity.getPrecursorEntity(), optionalTextEntity.get(), true);
migrationEntity.setMigratedEntity(migratedEntity);
migrationEntity.setOldId(migrationEntity.getPrecursorEntity().getId());
migrationEntity.setNewId(migratedEntity.getId());
}
tempEntitiesByValue.values()
.stream()
.flatMap(Collection::stream)
.forEach(TextEntity::removeFromGraph);
return entitiesToMigrate;
}
}
@@ -0,0 +1,17 @@
package com.iqser.red.service.redaction.v1.server.model;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import lombok.Builder;
import lombok.Getter;
import lombok.Setter;
@Builder
@Getter
@Setter
public class ClosestEntity {
private double distance;
private TextEntity textEntity;
}
@@ -1,116 +0,0 @@
package com.iqser.red.service.redaction.v1.server.model;
import java.util.List;
import java.util.PriorityQueue;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
import com.iqser.red.service.redaction.v1.server.model.document.entity.IEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.ManualChangeOverwrite;
import com.iqser.red.service.redaction.v1.server.model.document.entity.MatchedRule;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Getter;
import lombok.experimental.FieldDefaults;
@Getter
@Builder
@AllArgsConstructor
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
public class ManualEntity implements IEntity {
// The id must be mapped into a TextEntity as is for comments to work correctly
String id;
String value;
List<RectangleWithPage> entityPosition;
String ruleIdentifier;
String reason;
String legalBasis;
String type;
String section;
EntityType entityType;
boolean applied;
boolean isDictionaryEntry;
boolean isDossierDictionaryEntry;
boolean rectangle;
@Builder.Default
PriorityQueue<MatchedRule> matchedRuleList = new PriorityQueue<>();
@Builder.Default
ManualChangeOverwrite manualOverwrite = new ManualChangeOverwrite();
public static ManualEntity fromRedactionLogEntry(RedactionLogEntry redactionLogEntry) {
String ruleIdentifier = redactionLogEntry.getType() + "." + redactionLogEntry.getMatchedRule() + ".0";
List<RectangleWithPage> rectangleWithPages = redactionLogEntry.getPositions().stream().map(RectangleWithPage::fromRedactionLogRectangle).toList();
return ManualEntity.builder()
.id(redactionLogEntry.getId())
.value(redactionLogEntry.getValue())
.entityPosition(rectangleWithPages)
.ruleIdentifier(ruleIdentifier)
.reason(redactionLogEntry.getReason())
.legalBasis(redactionLogEntry.getLegalBasis())
.type(redactionLogEntry.getType())
.section(redactionLogEntry.getSection()).entityType(getEntityType(redactionLogEntry))
.applied(redactionLogEntry.isRedacted())
.isDictionaryEntry(redactionLogEntry.isDictionaryEntry())
.isDossierDictionaryEntry(redactionLogEntry.isDossierDictionaryEntry())
.rectangle(redactionLogEntry.isRectangle())
.build();
}
private static EntityType getEntityType(RedactionLogEntry redactionLogEntry) {
if (redactionLogEntry.isRecommendation()) {
return EntityType.RECOMMENDATION;
}
if (redactionLogEntry.isHint()) {
return EntityType.HINT;
}
return EntityType.ENTITY;
}
public static ManualEntity fromManualRedactionEntry(ManualRedactionEntry manualRedactionEntry, boolean hint) {
List<RectangleWithPage> rectangleWithPages = manualRedactionEntry.getPositions().stream().map(RectangleWithPage::fromAnnotationRectangle).toList();
ManualChangeOverwrite manualChangeOverwrite = new ManualChangeOverwrite();
manualChangeOverwrite.addChange(manualRedactionEntry);
return ManualEntity.builder()
.id(manualRedactionEntry.getAnnotationId())
.value(manualRedactionEntry.getValue())
.entityPosition(rectangleWithPages)
.ruleIdentifier("MAN.0.0")
.reason(manualRedactionEntry.getReason())
.legalBasis(manualRedactionEntry.getLegalBasis())
.type(manualRedactionEntry.getType())
.section(manualRedactionEntry.getSection()).entityType(hint ? EntityType.HINT : EntityType.ENTITY)
.applied(true)
.isDictionaryEntry(false)
.isDossierDictionaryEntry(false)
.rectangle(manualRedactionEntry.isRectangle())
.manualOverwrite(manualChangeOverwrite)
.build();
}
@Override
public TextRange getTextRange() {
return new TextRange(-1, -1);
}
@Override
public String type() {
return getManualOverwrite().getType().orElse(type);
}
}
@@ -0,0 +1,22 @@
package com.iqser.red.service.redaction.v1.server.model;
import java.util.List;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.migration.MigratedIds;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
@Data
@Builder
@NoArgsConstructor
@AllArgsConstructor
public class MigratedEntityLog {
MigratedIds migratedIds;
EntityLog entityLog;
}
@@ -0,0 +1,441 @@
package com.iqser.red.service.redaction.v1.server.model;
import static com.iqser.red.service.redaction.v1.server.service.EntityLogCreatorService.buildEntryState;
import static com.iqser.red.service.redaction.v1.server.service.EntityLogCreatorService.buildEntryType;
import java.awt.geom.Rectangle2D;
import java.util.Collections;
import java.util.LinkedList;
import java.util.List;
import java.util.Map;
import java.util.Optional;
import java.util.Set;
import java.util.stream.Collectors;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryState;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.server.migration.MigrationMapper;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.IEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.ManualChangeOverwrite;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Image;
import com.iqser.red.service.redaction.v1.server.service.ManualChangeFactory;
import com.iqser.red.service.redaction.v1.server.service.ManualChangesApplicationService;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Data
@Builder
@AllArgsConstructor
@RequiredArgsConstructor
public final class MigrationEntity {
private final PrecursorEntity precursorEntity;
private final RedactionLogEntry redactionLogEntry;
private IEntity migratedEntity;
private String oldId;
private String newId;
private String fileId;
@Builder.Default
List<BaseAnnotation> manualChanges = new LinkedList<>();
public static MigrationEntity fromRedactionLogEntry(RedactionLogEntry redactionLogEntry, boolean hint, String fileId) {
PrecursorEntity precursorEntity = createPrecursorEntity(redactionLogEntry, hint);
if (precursorEntity.getEntityType().equals(EntityType.HINT) && !redactionLogEntry.isHint() && !redactionLogEntry.isRedacted()) {
precursorEntity.ignore(precursorEntity.getRuleIdentifier(), precursorEntity.getReason());
} else if (redactionLogEntry.lastChangeIsRemoved()) {
precursorEntity.remove(precursorEntity.getRuleIdentifier(), precursorEntity.getReason());
} else if (lastManualChangeIsRemove(redactionLogEntry)) {
precursorEntity.ignore(precursorEntity.getRuleIdentifier(), precursorEntity.getReason());
} else if (precursorEntity.isApplied() && redactionLogEntry.isRecommendation()) {
precursorEntity.skip(precursorEntity.getRuleIdentifier(), precursorEntity.getReason());
} else if (precursorEntity.isApplied()) {
precursorEntity.apply(precursorEntity.getRuleIdentifier(), precursorEntity.getReason(), precursorEntity.getLegalBasis());
} else {
precursorEntity.skip(precursorEntity.getRuleIdentifier(), precursorEntity.getReason());
}
return MigrationEntity.builder().precursorEntity(precursorEntity).redactionLogEntry(redactionLogEntry).oldId(redactionLogEntry.getId()).fileId(fileId).build();
}
public static MigrationEntity fromRedactionLogImage(RedactionLogEntry redactionLogImage, Image image, String fileId) {
return MigrationEntity.builder().redactionLogEntry(redactionLogImage).migratedEntity(image).oldId(redactionLogImage.getId()).newId(image.getId()).fileId(fileId).build();
}
private static boolean lastManualChangeIsRemove(RedactionLogEntry redactionLogEntry) {
if (redactionLogEntry.getManualChanges() == null) {
return false;
}
return redactionLogEntry.getManualChanges()
.stream()
.reduce((a, b) -> b)
.map(m -> m.getManualRedactionType().equals(ManualRedactionType.REMOVE_LOCALLY))
.orElse(false);
}
public static PrecursorEntity createPrecursorEntity(RedactionLogEntry redactionLogEntry, boolean hint) {
String ruleIdentifier = buildRuleIdentifier(redactionLogEntry);
List<RectangleWithPage> rectangleWithPages = redactionLogEntry.getPositions()
.stream()
.map(RectangleWithPage::fromRedactionLogRectangle)
.toList();
EntityType entityType = getEntityType(redactionLogEntry, hint);
return PrecursorEntity.builder()
.id(redactionLogEntry.getId())
.value(redactionLogEntry.getValue())
.entityPosition(rectangleWithPages)
.ruleIdentifier(ruleIdentifier)
.reason(Optional.ofNullable(redactionLogEntry.getReason())
.orElse(""))
.legalBasis(redactionLogEntry.getLegalBasis())
.type(redactionLogEntry.getType())
.section(redactionLogEntry.getSection())
.engines(MigrationMapper.getMigratedEngines(redactionLogEntry))
.entityType(entityType)
.applied(redactionLogEntry.isRedacted())
.isDictionaryEntry(redactionLogEntry.isDictionaryEntry())
.isDossierDictionaryEntry(redactionLogEntry.isDossierDictionaryEntry())
.rectangle(redactionLogEntry.isRectangle())
.manualOverwrite(new ManualChangeOverwrite(entityType))
.build();
}
private static String buildRuleIdentifier(RedactionLogEntry redactionLogEntry) {
String ruleIdentifier;
if (redactionLogEntry.getMatchedRule() != null) {
ruleIdentifier = "OLD." + redactionLogEntry.getMatchedRule() + ".0";
} else {
ruleIdentifier = "MAN.5.0"; // pure ManualRedactions used to have no matched rule
}
return ruleIdentifier;
}
private static EntityType getEntityType(RedactionLogEntry redactionLogEntry, boolean hint) {
if (hint) {
return EntityType.HINT;
}
if (redactionLogEntry.isFalsePositive()) {
return EntityType.FALSE_POSITIVE;
}
if (redactionLogEntry.isHint()) {
return EntityType.HINT;
}
if (redactionLogEntry.isRecommendation()) {
return EntityType.RECOMMENDATION;
}
return EntityType.ENTITY;
}
private static EntryType getEntryType(EntityType entityType) {
return switch (entityType) {
case ENTITY -> EntryType.ENTITY;
case HINT -> EntryType.HINT;
case FALSE_POSITIVE -> EntryType.FALSE_POSITIVE;
case RECOMMENDATION -> EntryType.RECOMMENDATION;
case FALSE_RECOMMENDATION -> EntryType.FALSE_RECOMMENDATION;
};
}
public EntityLogEntry toEntityLogEntry(Map<String, String> oldToNewIdMapping) {
EntityLogEntry entityLogEntry;
if (migratedEntity instanceof Image image) {
entityLogEntry = createEntityLogEntry(image);
} else if (migratedEntity instanceof TextEntity textEntity) {
entityLogEntry = createEntityLogEntry(textEntity);
} else if (migratedEntity instanceof PrecursorEntity entity) {
entityLogEntry = createEntityLogEntry(entity);
} else {
throw new UnsupportedOperationException("Unknown subclass " + migratedEntity.getClass());
}
entityLogEntry.setManualChanges(ManualChangeFactory.toManualChangeList(migratedEntity.getManualOverwrite().getManualChangeLog(), redactionLogEntry.isHint()));
entityLogEntry.setColor(redactionLogEntry.getColor());
entityLogEntry.setChanges(redactionLogEntry.getChanges()
.stream()
.map(MigrationMapper::toEntityLogChanges)
.toList());
entityLogEntry.setReference(migrateSetOfIds(redactionLogEntry.getReference(), oldToNewIdMapping));
entityLogEntry.setImportedRedactionIntersections(migrateSetOfIds(redactionLogEntry.getImportedRedactionIntersections(), oldToNewIdMapping));
entityLogEntry.setEngines(MigrationMapper.getMigratedEngines(redactionLogEntry));
if (redactionLogEntry.getLegalBasis() != null) {
entityLogEntry.setLegalBasis(redactionLogEntry.getLegalBasis());
}
if (entityLogEntry.getEntryType().equals(EntryType.HINT) && lastManualChangeIsRemoveLocally(entityLogEntry)) {
entityLogEntry.setState(EntryState.IGNORED);
}
return entityLogEntry;
}
private static boolean lastManualChangeIsRemoveLocally(EntityLogEntry entityLogEntry) {
return entityLogEntry.getManualChanges()
.stream()
.reduce((a, b) -> b)
.filter(mc -> mc.getManualRedactionType().equals(com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType.REMOVE))
.isPresent();
}
private Set<String> migrateSetOfIds(Set<String> ids, Map<String, String> oldToNewIdMapping) {
if (ids == null) {
return Collections.emptySet();
}
return ids.stream()
.map(oldToNewIdMapping::get)
.collect(Collectors.toSet());
}
public EntityLogEntry createEntityLogEntry(Image image) {
List<Position> positions = getPositionsFromOverride(image).orElse(List.of(new Position(image.getPosition(), image.getPage().getNumber())));
return EntityLogEntry.builder()
.id(image.getId())
.value(image.value())
.type(image.type())
.reason(image.buildReasonWithManualChangeDescriptions())
.legalBasis(image.legalBasis())
.matchedRule(image.getMatchedRule().getRuleIdentifier().toString())
.dictionaryEntry(false)
.positions(positions)
.containingNodeId(image.getTreeId())
.closestHeadline(image.getHeadline().getTextBlock().getSearchText())
.section(image.getManualOverwrite().getSection()
.orElse(redactionLogEntry.getSection()))
.textAfter(redactionLogEntry.getTextAfter())
.textBefore(redactionLogEntry.getTextBefore())
.imageHasTransparency(image.isTransparent())
.state(buildEntryState(image))
.entryType(redactionLogEntry.isHint() ? EntryType.IMAGE_HINT : EntryType.IMAGE)
.build();
}
public EntityLogEntry createEntityLogEntry(PrecursorEntity precursorEntity) {
return EntityLogEntry.builder()
.id(precursorEntity.getId())
.reason(precursorEntity.buildReasonWithManualChangeDescriptions())
.legalBasis(precursorEntity.legalBasis())
.value(precursorEntity.value())
.type(precursorEntity.type())
.state(buildEntryState(precursorEntity))
.entryType(buildEntryType(precursorEntity))
.section(precursorEntity.getManualOverwrite().getSection()
.orElse(redactionLogEntry.getSection()))
.textAfter(redactionLogEntry.getTextAfter())
.textBefore(redactionLogEntry.getTextBefore())
.containingNodeId(Collections.emptyList())
.closestHeadline("")
.matchedRule(precursorEntity.getMatchedRule().getRuleIdentifier().toString())
.dictionaryEntry(precursorEntity.isDictionaryEntry())
.dossierDictionaryEntry(precursorEntity.isDossierDictionaryEntry())
.startOffset(-1)
.endOffset(-1)
.positions(precursorEntity.getManualOverwrite().getPositions()
.orElse(precursorEntity.getEntityPosition())
.stream()
.map(entityPosition -> new Position(entityPosition.rectangle2D(), entityPosition.pageNumber()))
.toList())
.engines(Collections.emptySet())
.build();
}
public EntityLogEntry createEntityLogEntry(TextEntity entity) {
assert entity.getPositionsOnPagePerPage().size() == 1;
List<Position> rectanglesPerLine = getRectanglesPerLine(entity);
return EntityLogEntry.builder()
.id(entity.getId())
.positions(rectanglesPerLine)
.reason(entity.buildReasonWithManualChangeDescriptions())
.legalBasis(entity.legalBasis())
.value(entity.getManualOverwrite().getValue()
.orElse(entity.getMatchedRule().isWriteValueWithLineBreaks() ? entity.getValueWithLineBreaks() : entity.getValue()))
.type(entity.type())
.section(entity.getManualOverwrite().getSection()
.orElse(redactionLogEntry.getSection()))
.textAfter(entity.getTextAfter())
.textBefore(entity.getTextBefore())
.containingNodeId(entity.getDeepestFullyContainingNode().getTreeId())
.closestHeadline(entity.getDeepestFullyContainingNode().getHeadline().getTextBlock().getSearchText())
.matchedRule(entity.getMatchedRule().getRuleIdentifier().toString())
.dictionaryEntry(entity.isDictionaryEntry())
.startOffset(entity.getTextRange().start())
.endOffset(entity.getTextRange().end())
.dossierDictionaryEntry(entity.isDossierDictionaryEntry())
.engines(entity.getEngines() != null ? entity.getEngines() : Collections.emptySet())
.state(buildEntryState(entity))
.entryType(buildEntryType(entity))
.build();
}
private static List<Position> getRectanglesPerLine(TextEntity entity) {
return getPositionsFromOverride(entity).orElse(entity.getPositionsOnPagePerPage()
.get(0).getRectanglePerLine()
.stream()
.map(rectangle2D -> new Position(rectangle2D,
entity.getPositionsOnPagePerPage()
.get(0).getPage().getNumber()))
.toList());
}
private static Optional<List<Position>> getPositionsFromOverride(IEntity entity) {
return entity.getManualOverwrite().getPositions()
.map(rects -> rects.stream()
.map(r -> new Position(r.rectangle2D(), r.pageNumber()))
.toList());
}
public boolean hasManualChangesOrComments() {
return !(redactionLogEntry.getManualChanges() == null || redactionLogEntry.getManualChanges().isEmpty()) || //
!(redactionLogEntry.getComments() == null || redactionLogEntry.getComments().isEmpty()) //
|| hasManualChanges();
}
public boolean hasManualChanges() {
return !manualChanges.isEmpty();
}
public void applyManualChanges(List<BaseAnnotation> manualChangesToApply, ManualChangesApplicationService manualChangesApplicationService) {
manualChanges.addAll(manualChangesToApply);
manualChangesToApply.forEach(manualChange -> {
if (manualChange instanceof ManualResizeRedaction manualResizeRedaction && migratedEntity instanceof TextEntity textEntity) {
// Due to the value in the old redaction log already being resized, there is no way to find the original entity ID and therefore to migrate the resize annotation correctly.
// Instead, we add an add_locally change to the db.
ManualResizeRedaction migratedManualResizeRedaction = ManualResizeRedaction.builder()
.positions(manualResizeRedaction.getPositions())
.annotationId(getNewId())
.updateDictionary(manualResizeRedaction.getUpdateDictionary())
.addToAllDossiers(manualResizeRedaction.isAddToAllDossiers())
.textAfter(manualResizeRedaction.getTextAfter())
.textBefore(manualResizeRedaction.getTextBefore())
.build();
manualChangesApplicationService.resize(textEntity, migratedManualResizeRedaction);
} else {
migratedEntity.getManualOverwrite().addChange(manualChange);
}
});
}
public ManualRedactionEntry buildManualRedactionEntry() {
assert hasManualChanges();
// currently we need to insert a manual redaction entry, whenever an entity has been resized.
String user = manualChanges.stream()
.filter(mc -> mc instanceof ManualResizeRedaction)
.findFirst()
.orElse(manualChanges.get(0)).getUser();
return ManualRedactionEntry.builder()
.annotationId(newId)
.fileId(fileId)
.type(redactionLogEntry.getType())
.value(redactionLogEntry.getValue())
.reason(redactionLogEntry.getReason())
.legalBasis(redactionLogEntry.getLegalBasis())
.section(redactionLogEntry.getSection())
.addToDictionary(false)
.addToDossierDictionary(false)
.rectangle(false)
.positions(buildPositions(migratedEntity))
.user(user)
.build();
}
private List<Rectangle> buildPositions(IEntity entity) {
if (entity instanceof TextEntity textEntity) {
var positionsOnPage = textEntity.getPositionsOnPagePerPage()
.get(0);
return positionsOnPage.getRectanglePerLine()
.stream()
.map(p -> new Rectangle((float) p.getX(), (float) p.getY(), (float) p.getWidth(), (float) p.getHeight(), positionsOnPage.getPage().getNumber()))
.toList();
}
if (entity instanceof PrecursorEntity pEntity) {
return pEntity.getManualOverwrite().getPositions()
.orElse(pEntity.getEntityPosition())
.stream()
.map(p -> new Rectangle((float) p.rectangle2D().getX(),
(float) p.rectangle2D().getY(),
(float) p.rectangle2D().getWidth(),
(float) p.rectangle2D().getHeight(),
p.pageNumber()))
.toList();
}
if (entity instanceof Image image) {
Rectangle2D position = image.getManualOverwrite().getPositions()
.map(p -> p.get(0).rectangle2D())
.orElse(image.getPosition());
return List.of(new Rectangle((float) position.getX(), (float) position.getY(), (float) position.getWidth(), (float) position.getHeight(), image.getPage().getNumber()));
} else {
throw new UnsupportedOperationException();
}
}
public boolean needsManualEntry() {
return manualChanges.stream()
.anyMatch(mc -> mc instanceof ManualResizeRedaction && !((ManualResizeRedaction) mc).getUpdateDictionary()) && !(migratedEntity instanceof Image);
}
}
@@ -0,0 +1,195 @@
package com.iqser.red.service.redaction.v1.server.model;
import static com.iqser.red.service.redaction.v1.server.service.NotFoundImportedEntitiesService.IMPORTED_REDACTION_TYPE;
import java.util.List;
import java.util.Optional;
import java.util.PriorityQueue;
import java.util.Set;
import java.util.UUID;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.IEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.ManualChangeOverwrite;
import com.iqser.red.service.redaction.v1.server.model.document.entity.MatchedRule;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Getter;
import lombok.experimental.FieldDefaults;
@Getter
@Builder
@AllArgsConstructor
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
@SuppressWarnings("PMD.AvoidFieldNameMatchingMethodName")
public class PrecursorEntity implements IEntity {
// The id must be mapped into a TextEntity as is for comments to work correctly
String id;
String value;
List<RectangleWithPage> entityPosition;
String ruleIdentifier;
String reason;
String legalBasis;
String type;
String section;
EntityType entityType;
boolean applied;
boolean isDictionaryEntry;
boolean isDossierDictionaryEntry;
boolean rectangle;
Set<Engine> engines;
@Builder.Default
PriorityQueue<MatchedRule> matchedRuleList = new PriorityQueue<>();
ManualChangeOverwrite manualOverwrite;
public static PrecursorEntity fromManualRedactionEntry(ManualRedactionEntry manualRedactionEntry, boolean hint) {
List<RectangleWithPage> rectangleWithPages = manualRedactionEntry.getPositions()
.stream()
.map(RectangleWithPage::fromAnnotationRectangle)
.toList();
var entityType = hint ? EntityType.HINT : EntityType.ENTITY;
ManualChangeOverwrite manualChangeOverwrite = new ManualChangeOverwrite(entityType);
manualChangeOverwrite.addChange(manualRedactionEntry);
return PrecursorEntity.builder()
.id(manualRedactionEntry.getAnnotationId())
.value(manualRedactionEntry.getValue())
.entityPosition(rectangleWithPages)
.ruleIdentifier("MAN.0.0")
.reason(manualRedactionEntry.getReason())
.legalBasis(manualRedactionEntry.getLegalBasis())
.type(manualRedactionEntry.getType())
.section(manualRedactionEntry.getSection())
.entityType(entityType)
.applied(true)
.isDictionaryEntry(false)
.isDossierDictionaryEntry(false)
.rectangle(manualRedactionEntry.isRectangle())
.manualOverwrite(manualChangeOverwrite)
.engines(Set.of(Engine.MANUAL))
.build();
}
public static PrecursorEntity fromEntityLogEntry(EntityLogEntry entityLogEntry) {
List<RectangleWithPage> rectangleWithPages = entityLogEntry.getPositions()
.stream()
.map(RectangleWithPage::fromEntityLogPosition)
.toList();
EntityType entityType = getEntityType(entityLogEntry.getEntryType());
return PrecursorEntity.builder()
.id(entityLogEntry.getId())
.value(entityLogEntry.getValue())
.entityPosition(rectangleWithPages)
.ruleIdentifier(entityLogEntry.getMatchedRule())
.reason(entityLogEntry.getReason())
.legalBasis(entityLogEntry.getLegalBasis())
.type(entityLogEntry.getType())
.section(entityLogEntry.getSection())
.entityType(entityType)
.isDictionaryEntry(entityLogEntry.isDictionaryEntry())
.isDossierDictionaryEntry(entityLogEntry.isDossierDictionaryEntry())
.manualOverwrite(new ManualChangeOverwrite(entityType))
.engines(entityLogEntry.getEngines())
.build();
}
public static PrecursorEntity fromImportedEntry(ImportedRedaction importedRedaction) {
List<RectangleWithPage> rectangleWithPages = importedRedaction.getPositions()
.stream()
.map(RectangleWithPage::fromEntityLogPosition)
.toList();
EntryType entryType = Optional.ofNullable(importedRedaction.getEntryType())
.orElse(EntryType.ENTITY);
EntityType entityType = getEntityType(entryType);
String value = Optional.ofNullable(importedRedaction.getValue())
.orElse("");
return PrecursorEntity.builder()
.id(importedRedaction.getId())
.value(value)
.entityPosition(rectangleWithPages)
.reason(Optional.ofNullable(importedRedaction.getReason())
.orElse(""))
.legalBasis(Optional.ofNullable(importedRedaction.getLegalBasis())
.orElse(""))
.type(Optional.ofNullable(importedRedaction.getType())
.orElse(IMPORTED_REDACTION_TYPE))
.entityType(entityType)
.isDictionaryEntry(false)
.isDossierDictionaryEntry(false)
.rectangle(value.isBlank() || entryType.equals(EntryType.IMAGE) || entryType.equals(EntryType.IMAGE_HINT) || entryType.equals(EntryType.AREA))
.manualOverwrite(new ManualChangeOverwrite(entityType))
.engines(Set.of(Engine.IMPORTED))
.build();
}
public static PrecursorEntity fromManualResizeRedaction(ManualResizeRedaction manualResizeRedaction) {
List<RectangleWithPage> rectangleWithPages = manualResizeRedaction.getPositions()
.stream()
.map(RectangleWithPage::fromAnnotationRectangle)
.toList();
return PrecursorEntity.builder()
.id(UUID.randomUUID().toString())
.value(manualResizeRedaction.getValue())
.entityPosition(rectangleWithPages)
.entityType(EntityType.ENTITY)
.manualOverwrite(new ManualChangeOverwrite(EntityType.ENTITY))
.build();
}
@Override
public TextRange getTextRange() {
return new TextRange(-1, -1);
}
@Override
public String type() {
return getManualOverwrite().getType()
.orElse(type);
}
private static EntityType getEntityType(EntryType entryType) {
switch (entryType) {
case FALSE_RECOMMENDATION -> {
return EntityType.FALSE_RECOMMENDATION;
}
case FALSE_POSITIVE -> {
return EntityType.FALSE_POSITIVE;
}
case HINT -> {
return EntityType.HINT;
}
case RECOMMENDATION -> {
return EntityType.RECOMMENDATION;
}
default -> {
return EntityType.ENTITY;
}
}
}
}
@@ -2,6 +2,7 @@ package com.iqser.red.service.redaction.v1.server.model;
import java.awt.geom.Rectangle2D;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Rectangle;
public record RectangleWithPage(int pageNumber, Rectangle2D rectangle2D) {
@@ -12,6 +13,12 @@ public record RectangleWithPage(int pageNumber, Rectangle2D rectangle2D) {
}
public static RectangleWithPage fromEntityLogPosition(Position position) {
return new RectangleWithPage(position.getPageNumber(), toRectangle2D(position));
}
public static RectangleWithPage fromAnnotationRectangle(com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Rectangle rectangle) {
return new RectangleWithPage(rectangle.getPage(), toRectangle2D(rectangle));
@@ -20,13 +27,19 @@ public record RectangleWithPage(int pageNumber, Rectangle2D rectangle2D) {
private static Rectangle2D toRectangle2D(Rectangle rectangle) {
return new Rectangle2D.Float(rectangle.getTopLeft().getX(), rectangle.getTopLeft().getY() + rectangle.getHeight(), rectangle.getWidth(), -rectangle.getHeight());
return new Rectangle2D.Float(rectangle.getTopLeft().getX(), rectangle.getTopLeft().getY(), rectangle.getWidth(), rectangle.getHeight());
}
private static Rectangle2D toRectangle2D(Position position) {
return new Rectangle2D.Float(position.x(), position.y(), position.w(), position.h());
}
private static Rectangle2D toRectangle2D(com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Rectangle rectangle) {
return new Rectangle2D.Float(rectangle.getTopLeft().getX(), rectangle.getTopLeft().getY() + rectangle.getHeight(), rectangle.getWidth(), -rectangle.getHeight());
return new Rectangle2D.Float(rectangle.getTopLeft().getX(), rectangle.getTopLeft().getY(), rectangle.getWidth(), rectangle.getHeight());
}
}
@@ -1,6 +1,7 @@
package com.iqser.red.service.redaction.v1.server.model.component;
import java.util.List;
import java.util.Optional;
import java.util.Set;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change;
@@ -80,12 +81,14 @@ public class Entity {
.legalBasis(e.getLegalBasis())
.imported(e.isImported())
.section(e.getSection())
.color(e.getColor()).positions(e.getPositions()).containingNode(document.getDocumentTree().getEntryById(e.getContainingNodeId()).getNode())
.color(e.getColor())
.positions(e.getPositions())
.containingNode(document.getDocumentTree().getEntryById(e.getContainingNodeId()).getNode())
.textBefore(e.getTextBefore())
.textAfter(e.getTextAfter())
.startOffset(e.getStartOffset())
.endOffset(e.getEndOffset())
.length(e.getValue().length())
.length(Optional.ofNullable(e.getValue()).orElse("").length())
.imageHasTransparency(e.isImageHasTransparency())
.isDictionaryEntry(e.isDictionaryEntry())
.isDossierDictionaryEntry(e.isDossierDictionaryEntry())
@@ -2,23 +2,23 @@ package com.iqser.red.service.redaction.v1.server.model.dictionary;
import static java.lang.String.format;
import java.util.Arrays;
import java.util.Collection;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.Set;
import java.util.regex.Matcher;
import java.util.regex.Pattern;
import java.util.stream.Collectors;
import java.util.stream.Stream;
import org.apache.commons.lang3.StringUtils;
import com.iqser.red.service.redaction.v1.server.utils.exception.NotFoundException;
import com.iqser.red.service.redaction.v1.server.model.document.entity.MatchedRule;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.utils.Patterns;
import com.iqser.red.service.redaction.v1.server.utils.exception.NotFoundException;
import lombok.Data;
import lombok.Getter;
@@ -107,39 +107,53 @@ public class Dictionary {
if (StringUtils.isEmpty(value)) {
throw new IllegalArgumentException(format("%s is not a valid dictionary entry", value));
}
boolean isCaseInsensitive = localAccessMap.get(type).isCaseInsensitive();
Set<MatchedRule> matchedRulesSet = new HashSet<>(matchedRules);
localAccessMap.get(type).getLocalEntriesWithMatchedRules().merge(value.trim(), matchedRulesSet, (set1, set2) -> Stream.concat(set1.stream(), set2.stream()).collect(Collectors.toSet()));
String cleanedValue = value;
if (isCaseInsensitive) {
cleanedValue = cleanedValue.toLowerCase(Locale.US);
}
localAccessMap.get(type)
.getLocalEntriesWithMatchedRules()
.merge(cleanedValue.trim(), matchedRulesSet, (set1, set2) -> Stream.concat(set1.stream(), set2.stream()).collect(Collectors.toSet()));
if (alsoAddLastname) {
String lastname = value.split(" ")[0];
localAccessMap.get(type).getLocalEntriesWithMatchedRules().merge(lastname, matchedRulesSet, (set1, set2) -> Stream.concat(set1.stream(), set2.stream()).collect(Collectors.toSet()));
String lastname = cleanedValue.split(" ")[0];
localAccessMap.get(type)
.getLocalEntriesWithMatchedRules()
.merge(lastname, matchedRulesSet, (set1, set2) -> Stream.concat(set1.stream(), set2.stream()).collect(Collectors.toSet()));
}
}
public void recommendEverywhere(TextEntity textEntity) {
addLocalDictionaryEntry(textEntity.getType(), textEntity.getValue(), textEntity.getMatchedRuleList(), false);
addLocalDictionaryEntry(textEntity.type(), textEntity.getValue(), textEntity.getMatchedRuleList(), false);
}
public void recommendEverywhereWithLastNameSeparately(TextEntity textEntity) {
addLocalDictionaryEntry(textEntity.getType(), textEntity.getValue(), textEntity.getMatchedRuleList(), true);
addLocalDictionaryEntry(textEntity.type(), textEntity.getValue(), textEntity.getMatchedRuleList(), true);
}
public void addMultipleAuthorsAsRecommendation(TextEntity textEntity) {
String cleanedWord = textEntity.getValue().replaceAll(",", " ").replaceAll(" ", " ").trim() + " ";
Pattern pattern = Patterns.AUTHOR_TABLE_SPLITTER;
Matcher matcher = pattern.matcher(cleanedWord);
splitIntoAuthorNames(textEntity).forEach(authorName -> addLocalDictionaryEntry(textEntity.type(), authorName, textEntity.getMatchedRuleList(), true));
while (matcher.find()) {
String match = matcher.group().trim();
if (match.length() >= 3) {
addLocalDictionaryEntry(textEntity.getType(), match, textEntity.getMatchedRuleList(), true);
}
}
public static List<String> splitIntoAuthorNames(TextEntity textEntity) {
List<String> splitAuthorNames;
if (textEntity.getValue().contains(",")) {
splitAuthorNames = Arrays.asList(textEntity.getValue().split(","));
} else {
splitAuthorNames = Arrays.asList(textEntity.getValueWithLineBreaks().split("\n"));
}
return splitAuthorNames.stream().map(String::trim).filter(authorName -> Patterns.AUTHOR_NAME_PATTERN.matcher(authorName).matches()).toList();
}
}
@@ -2,6 +2,8 @@ package com.iqser.red.service.redaction.v1.server.model.dictionary;
import java.io.Serializable;
import java.util.HashMap;
import java.util.List;
import java.util.Locale;
import java.util.Set;
import java.util.stream.Collectors;
@@ -109,4 +111,11 @@ public class DictionaryModel implements Serializable {
return falseRecommendationsSearch;
}
public Set<MatchedRule> getMatchedRulesForLocalDictionaryEntry(String value) {
var cleanedValue = isCaseInsensitive() ? value.toLowerCase(Locale.US) : value;
return localEntriesWithMatchedRules.get(cleanedValue);
}
}
@@ -1,5 +1,7 @@
package com.iqser.red.service.redaction.v1.server.model.document;
import java.io.Serializable;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.DocumentPage;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.DocumentPositionData;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.DocumentStructure;
@@ -9,13 +11,15 @@ import lombok.AccessLevel;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.NoArgsConstructor;
import lombok.experimental.FieldDefaults;
@Data
@Builder
@AllArgsConstructor
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
public class DocumentData {
@NoArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
public class DocumentData implements Serializable {
DocumentPage[] documentPages;
DocumentTextData[] documentTextData;
@@ -13,6 +13,7 @@ import lombok.Setter;
@Setter
@EqualsAndHashCode
@SuppressWarnings("PMD.AvoidFieldNameMatchingMethodName")
public class TextRange implements Comparable<TextRange> {
private int start;
@@ -10,30 +10,29 @@ import java.util.Optional;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualForceRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualLegalBasisChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.redaction.v1.server.model.RectangleWithPage;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.NoArgsConstructor;
import lombok.experimental.FieldDefaults;
@Builder
@NoArgsConstructor
@AllArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
public class ManualChangeOverwrite {
private static final Map<Class<? extends BaseAnnotation>, String> MANUAL_CHANGE_DESCRIPTIONS = Map.of(//
ManualRedactionEntry.class, "created by manual change", //
ManualLegalBasisChange.class, "legal basis was manually changed", //
ManualResizeRedaction.class, "resized by manual override", //
ManualForceRedaction.class, "forced by manual override", //
IdRemoval.class, "removed by manual override", //
ManualRecategorization.class, "recategorized by manual override");
ManualRedactionEntry.class, "created by manual change", //
ManualLegalBasisChange.class, "legal basis was manually changed", //
ManualResizeRedaction.class, "resized by manual override", //
ManualForceRedaction.class, "forced by manual override", //
IdRemoval.class, "removed by manual override", //
ManualRecategorization.class, "recategorized by manual override");
List<BaseAnnotation> manualChanges = new LinkedList<>();
boolean changed;
@@ -42,11 +41,25 @@ public class ManualChangeOverwrite {
String legalBasis;
String section;
String value;
List<RectangleWithPage> positions;
Boolean applied;
Boolean removed;
Boolean ignored;
Boolean resized;
Boolean recategorized;
EntityType entityType;
public ManualChangeOverwrite() {
this(EntityType.ENTITY);
}
public ManualChangeOverwrite(EntityType entityType) {
this.entityType = entityType;
}
public void calculateCurrentOverride() {
@@ -67,7 +80,8 @@ public class ManualChangeOverwrite {
manualChanges.sort(Comparator.comparing(BaseAnnotation::getRequestDate));
updateFields(manualChanges);
// make list unmodifiable.
return manualChanges.stream().toList();
return manualChanges.stream()
.toList();
}
@@ -80,13 +94,20 @@ public class ManualChangeOverwrite {
if (manualChange instanceof IdRemoval) {
applied = false;
ignored = true;
if (sortedManualChanges.get(0) instanceof ManualRedactionEntry) { // set to removed if it's a Manual Redaction
removed = true;
} else {
ignored = true;
}
}
if (manualChange instanceof ManualRedactionEntry manualRedactionEntry) {
setToApplied();
legalBasis = manualRedactionEntry.getLegalBasis();
}
if (manualChange instanceof ManualForceRedaction manualForceRedaction) {
removed = false;
ignored = false;
applied = true;
setToApplied();
legalBasis = manualForceRedaction.getLegalBasis();
}
@@ -96,16 +117,23 @@ public class ManualChangeOverwrite {
value = manualLegalBasisChange.getValue();
}
if (manualChange instanceof ManualResizeRedaction) {
// resizing logic happens in ManualChangesApplicationService.
if (manualChange instanceof ManualResizeRedaction manualResizeRedaction) {
// resizing logic for TextEntities and Images happens in ManualChangesApplicationService.
resized = true;
// This is only for not found Manual Entities.
value = manualResizeRedaction.getValue();
positions = manualResizeRedaction.getPositions()
.stream()
.map(RectangleWithPage::fromAnnotationRectangle)
.toList();
}
if (manualChange instanceof ManualRecategorization recategorization) {
// recategorization logic happens in ManualChangesApplicationService.
recategorized = true;
// this is only relevant for ManualEntities. Image and TextEntity is recategorized in the ManualChangesApplicationService.
type = recategorization.getType();
if (recategorization.getLegalBasis() != null && !recategorization.getLegalBasis().isEmpty()) {
legalBasis = recategorization.getLegalBasis();
}
}
descriptions.add(MANUAL_CHANGE_DESCRIPTIONS.get(manualChange.getClass()));
@@ -114,6 +142,16 @@ public class ManualChangeOverwrite {
}
private void setToApplied() {
removed = false;
ignored = false;
if (!isHint(entityType)) {
applied = true;
}
}
public void addChange(BaseAnnotation manualChange) {
changed = true;
@@ -197,4 +235,17 @@ public class ManualChangeOverwrite {
return descriptions == null ? Collections.emptyList() : descriptions;
}
public Optional<List<RectangleWithPage>> getPositions() {
calculateCurrentOverride();
return positions == null ? Optional.empty() : Optional.of(positions);
}
private boolean isHint(EntityType entityType) {
return entityType.equals(EntityType.HINT);
}
}
@@ -24,18 +24,19 @@ public final class MatchedRule implements Comparable<MatchedRule> {
public static final RuleType FINAL_TYPE = RuleType.fromString("FINAL");
public static final RuleType ELIMINATION_RULE_TYPE = RuleType.fromString("X");
private static final List<RuleType> RULE_TYPE_PRIORITIES = List.of(FINAL_TYPE, ELIMINATION_RULE_TYPE);
public static final RuleType IMPORTED_TYPE = RuleType.fromString("IMP");
private static final List<RuleType> RULE_TYPE_PRIORITIES = List.of(FINAL_TYPE, ELIMINATION_RULE_TYPE, IMPORTED_TYPE);
RuleIdentifier ruleIdentifier;
@Builder.Default
String reason = "";
@Builder.Default
String legalBasis = "";
boolean applied;
boolean writeValueWithLineBreaks;
boolean applied;
boolean removed;
boolean ignored;
boolean resized;
@Builder.Default
Set<TextEntity> references = Collections.emptySet();
@@ -46,6 +47,20 @@ public final class MatchedRule implements Comparable<MatchedRule> {
}
public MatchedRule asSkippedIfApplied() {
if (!this.isApplied()) {
return this;
}
return MatchedRule.builder().ruleIdentifier(getRuleIdentifier())
.writeValueWithLineBreaks(this.isWriteValueWithLineBreaks())
.legalBasis(this.getLegalBasis())
.reason(this.getReason())
.references(this.getReferences())
.build();
}
@Override
public int compareTo(MatchedRule matchedRule) {
@@ -1,6 +1,7 @@
package com.iqser.red.service.redaction.v1.server.model.document.entity;
import java.awt.geom.Rectangle2D;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Comparator;
import java.util.HashSet;
@@ -28,21 +29,23 @@ import lombok.experimental.FieldDefaults;
@AllArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
@SuppressWarnings("PMD.AvoidFieldNameMatchingMethodName")
public class TextEntity implements IEntity {
// primary key
@EqualsAndHashCode.Include
final TextRange textRange;
@EqualsAndHashCode.Include
final String type;
@EqualsAndHashCode.Include
final EntityType entityType;
final String id;
// primary key end
TextRange textRange;
@Builder.Default
List<TextRange> duplicateTextRanges = new ArrayList<>();
String type; // TODO: make final once ManualChangesApplicatioService recategorize is deleted
final EntityType entityType;
@Builder.Default
final PriorityQueue<MatchedRule> matchedRuleList = new PriorityQueue<>();
@Builder.Default
final ManualChangeOverwrite manualOverwrite = new ManualChangeOverwrite();
final ManualChangeOverwrite manualOverwrite;
boolean dictionaryEntry;
boolean dossierDictionaryEntry;
@@ -62,12 +65,30 @@ public class TextEntity implements IEntity {
SemanticNode deepestFullyContainingNode;
public static TextEntity initialEntityNode(TextRange textRange, String type, EntityType entityType) {
public static TextEntity initialEntityNode(TextRange textRange, String type, EntityType entityType, SemanticNode node) {
return TextEntity.builder().type(type).entityType(entityType).textRange(textRange).build();
return TextEntity.builder().id(buildId(node, textRange, type, entityType)).type(type).entityType(entityType).textRange(textRange).manualOverwrite(new ManualChangeOverwrite(entityType)).build();
}
public static TextEntity initialEntityNode(TextRange textRange, String type, EntityType entityType, String id) {
return TextEntity.builder().id(id).type(type).entityType(entityType).textRange(textRange).manualOverwrite(new ManualChangeOverwrite(entityType)).build();
}
private static String buildId(SemanticNode node, TextRange textRange, String type, EntityType entityType) {
Map<Page, List<Rectangle2D>> rectanglesPerLinePerPage = node.getPositionsPerPage(textRange);
return IdBuilder.buildId(rectanglesPerLinePerPage.keySet(), rectanglesPerLinePerPage.values().stream().flatMap(Collection::stream).toList(), type, entityType.name());
}
public void addTextRange(TextRange textRange) {
duplicateTextRanges.add(textRange);
}
public boolean occursInNodeOfType(Class<? extends SemanticNode> clazz) {
return intersectingNodes.stream().anyMatch(clazz::isInstance);
@@ -82,13 +103,13 @@ public class TextEntity implements IEntity {
public boolean isType(String type) {
return this.type.equals(type);
return type().equals(type);
}
public boolean isAnyType(List<String> types) {
return types.contains(type);
return types.contains(type());
}
@@ -125,7 +146,6 @@ public class TextEntity implements IEntity {
.min(Comparator.comparingInt(Page::getNumber))
.orElseThrow(() -> new RuntimeException("No Positions found on any page!"));
String id = IdBuilder.buildId(pages, rectanglesPerLinePerPage.values().stream().flatMap(Collection::stream).toList(), type, entityType.name());
positionsOnPagePerPage = rectanglesPerLinePerPage.entrySet().stream().map(entry -> buildPositionOnPage(firstPage, id, entry)).toList();
}
return positionsOnPagePerPage;
@@ -193,7 +213,7 @@ public class TextEntity implements IEntity {
});
sb.delete(sb.length() - 2, sb.length());
sb.append("], type = \"");
sb.append(type);
sb.append(type());
sb.append("\", EntityType.");
sb.append(entityType);
sb.append("]");
@@ -207,4 +227,11 @@ public class TextEntity implements IEntity {
return getManualOverwrite().getType().orElse(type);
}
@Override
public String value() {
return getManualOverwrite().getValue().orElse(getMatchedRule().isWriteValueWithLineBreaks() ? getValueWithLineBreaks() : value);
}
}
@@ -14,11 +14,13 @@ import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlockCollector;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.EqualsAndHashCode;
import lombok.NoArgsConstructor;
import lombok.experimental.FieldDefaults;
@@ -27,8 +29,14 @@ import lombok.experimental.FieldDefaults;
@AllArgsConstructor
@NoArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Document implements GenericSemanticNode {
@EqualsAndHashCode.Include
List<Integer> treeId = Collections.emptyList();
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
Set<Page> pages;
DocumentTree documentTree;
Integer numberOfPages;
@@ -67,13 +75,6 @@ public class Document implements GenericSemanticNode {
}
@Override
public List<Integer> getTreeId() {
return Collections.emptyList();
}
@Override
public void setTreeId(List<Integer> tocId) {
@@ -1,12 +1,15 @@
package com.iqser.red.service.redaction.v1.server.model.document.nodes;
import java.awt.geom.Rectangle2D;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -21,21 +24,25 @@ import lombok.experimental.FieldDefaults;
@AllArgsConstructor
@NoArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Footer implements GenericSemanticNode {
@Builder.Default
final static SectionIdentifier sectionIdentifier = SectionIdentifier.empty();
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
TextBlock leafTextBlock;
@EqualsAndHashCode.Exclude
DocumentTree documentTree;
@Builder.Default
@EqualsAndHashCode.Exclude
Set<TextEntity> entities = new HashSet<>();
Map<Page, Rectangle2D> bBoxCache;
@Override
public NodeType getType() {
@@ -71,4 +78,14 @@ public class Footer implements GenericSemanticNode {
return treeId + ": " + NodeType.FOOTER + ": " + leafTextBlock.buildSummary();
}
@Override
public Map<Page, Rectangle2D> getBBox() {
if (bBoxCache == null) {
bBoxCache = GenericSemanticNode.super.getBBox();
}
return bBoxCache;
}
}
@@ -1,12 +1,15 @@
package com.iqser.red.service.redaction.v1.server.model.document.nodes;
import java.awt.geom.Rectangle2D;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -21,21 +24,25 @@ import lombok.experimental.FieldDefaults;
@AllArgsConstructor
@NoArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Header implements GenericSemanticNode {
@Builder.Default
final static SectionIdentifier sectionIdentifier = SectionIdentifier.empty();
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
TextBlock leafTextBlock;
@EqualsAndHashCode.Exclude
DocumentTree documentTree;
@Builder.Default
@EqualsAndHashCode.Exclude
Set<TextEntity> entities = new HashSet<>();
Map<Page, Rectangle2D> bBoxCache;
@Override
public boolean isLeaf() {
@@ -71,4 +78,14 @@ public class Header implements GenericSemanticNode {
return treeId + ": " + NodeType.HEADER + ": " + leafTextBlock.buildSummary();
}
@Override
public Map<Page, Rectangle2D> getBBox() {
if (bBoxCache == null) {
bBoxCache = GenericSemanticNode.super.getBBox();
}
return bBoxCache;
}
}
@@ -1,13 +1,16 @@
package com.iqser.red.service.redaction.v1.server.model.document.nodes;
import java.awt.geom.Rectangle2D;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.AtomicTextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -22,19 +25,23 @@ import lombok.experimental.FieldDefaults;
@AllArgsConstructor
@NoArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Headline implements GenericSemanticNode {
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
TextBlock leafTextBlock;
SectionIdentifier sectionIdentifier;
@EqualsAndHashCode.Exclude
DocumentTree documentTree;
@Builder.Default
@EqualsAndHashCode.Exclude
Set<TextEntity> entities = new HashSet<>();
Map<Page, Rectangle2D> bBoxCache;
@Override
public NodeType getType() {
@@ -71,6 +78,16 @@ public class Headline implements GenericSemanticNode {
}
@Override
public Map<Page, Rectangle2D> getBBox() {
if (bBoxCache == null) {
bBoxCache = GenericSemanticNode.super.getBBox();
}
return bBoxCache;
}
@Override
public SectionIdentifier getSectionIdentifier() {
@@ -18,6 +18,7 @@ import com.iqser.red.service.redaction.v1.server.model.document.entity.MatchedRu
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlockCollector;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -32,8 +33,13 @@ import lombok.experimental.FieldDefaults;
@AllArgsConstructor
@NoArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Image implements GenericSemanticNode, IEntity {
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
String id;
@@ -68,7 +74,9 @@ public class Image implements GenericSemanticNode, IEntity {
@Override
public TextBlock getTextBlock() {
return streamAllSubNodes().filter(SemanticNode::isLeaf).map(SemanticNode::getLeafTextBlock).collect(new TextBlockCollector());
return streamAllSubNodes().filter(SemanticNode::isLeaf)
.map(SemanticNode::getLeafTextBlock)
.collect(new TextBlockCollector());
}
@@ -89,7 +97,8 @@ public class Image implements GenericSemanticNode, IEntity {
@Override
public String type() {
return getManualOverwrite().getType().orElse(imageType.toString());
return getManualOverwrite().getType()
.orElse(imageType.toString());
}
@@ -122,6 +131,32 @@ public class Image implements GenericSemanticNode, IEntity {
}
public boolean mostlyContainedBy(Image image, double containmentThreshold) {
Map<Page, Rectangle2D> bboxImage = image.getBBox();
Map<Page, Rectangle2D> bbox = this.getBBox();
//image needs to be on the same page
if(bboxImage.get(this.page) != null) {
Rectangle2D intersection = bboxImage.get(this.page).createIntersection(bbox.get(this.page));
double calculatedIntersection = intersection.getWidth() * intersection.getHeight();
double area = bbox.get(this.page).getWidth() * bbox.get(this.page).getHeight();
return (calculatedIntersection / area) > containmentThreshold;
}
return false;
}
public boolean mostlyContains(Image image, double containmentThreshold) {
Map<Page, Rectangle2D> bboxImage = image.getBBox();
Map<Page, Rectangle2D> bbox = this.getBBox();
Rectangle2D intersection = bbox.get(this.page).createIntersection(bboxImage.get(this.page));
double calculatedIntersection = intersection.getWidth() * intersection.getHeight();
double area = bbox.get(this.page).getWidth() * bbox.get(this.page).getHeight();
return (area / calculatedIntersection) > containmentThreshold;
}
public int length() {
return 0;
@@ -6,10 +6,22 @@ public enum ImageType {
LOGO,
FORMULA,
SIGNATURE,
OTHER,
OTHER {
@Override
public String toString() {
return "image";
}
},
OCR;
public String toString() {
return name().toLowerCase(Locale.ENGLISH);
}
public static ImageType fromString(String imageType) {
return switch (imageType.toLowerCase(Locale.ROOT)) {
@@ -23,26 +23,23 @@ import lombok.experimental.FieldDefaults;
@NoArgsConstructor
@AllArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Page {
@EqualsAndHashCode.Include
Integer number;
Integer height;
Integer width;
Integer rotation;
@EqualsAndHashCode.Exclude
List<SemanticNode> mainBody;
@EqualsAndHashCode.Exclude
Header header;
@EqualsAndHashCode.Exclude
Footer footer;
@Builder.Default
@EqualsAndHashCode.Exclude
Set<TextEntity> entities = new HashSet<>();
@Builder.Default
@EqualsAndHashCode.Exclude
Set<Image> images = new HashSet<>();
@@ -57,19 +54,4 @@ public class Page {
return String.valueOf(number);
}
@Override
public int hashCode() {
return number;
}
@Override
public boolean equals(Object o) {
return o instanceof Page && o.hashCode() == this.hashCode();
}
}
@@ -1,12 +1,15 @@
package com.iqser.red.service.redaction.v1.server.model.document.nodes;
import java.awt.geom.Rectangle2D;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -19,18 +22,23 @@ import lombok.experimental.FieldDefaults;
@Builder
@AllArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Paragraph implements GenericSemanticNode {
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
TextBlock leafTextBlock;
@EqualsAndHashCode.Exclude
DocumentTree documentTree;
@Builder.Default
@EqualsAndHashCode.Exclude
Set<TextEntity> entities = new HashSet<>();
Map<Page, Rectangle2D> bBoxCache;
@Override
public NodeType getType() {
@@ -59,4 +67,14 @@ public class Paragraph implements GenericSemanticNode {
return treeId + ": " + NodeType.PARAGRAPH + ": " + leafTextBlock.buildSummary();
}
@Override
public Map<Page, Rectangle2D> getBBox() {
if (bBoxCache == null) {
bBoxCache = GenericSemanticNode.super.getBBox();
}
return bBoxCache;
}
}
@@ -1,19 +1,23 @@
package com.iqser.red.service.redaction.v1.server.model.document.nodes;
import java.awt.geom.Rectangle2D;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlockCollector;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
import lombok.Builder;
import lombok.Data;
import lombok.EqualsAndHashCode;
import lombok.RequiredArgsConstructor;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@@ -22,18 +26,23 @@ import lombok.extern.slf4j.Slf4j;
@Builder
@AllArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Section implements GenericSemanticNode {
@EqualsAndHashCode.Include
List<Integer> treeId;
TextBlock textBlock;
@EqualsAndHashCode.Exclude
DocumentTree documentTree;
@Builder.Default
@EqualsAndHashCode.Exclude
Set<TextEntity> entities = new HashSet<>();
Map<Page, Rectangle2D> bBoxCache;
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@Override
public NodeType getType() {
@@ -92,4 +101,14 @@ public class Section implements GenericSemanticNode {
return streamAllSubNodesOfType(NodeType.HEADLINE).anyMatch(h -> h.containsStringIgnoreCase(value));
}
@Override
public Map<Page, Rectangle2D> getBBox() {
if (bBoxCache == null) {
bBoxCache = GenericSemanticNode.super.getBBox();
}
return bBoxCache;
}
}
@@ -19,8 +19,10 @@ import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.AtomicTextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.service.document.NodeVisitor;
import com.iqser.red.service.redaction.v1.server.utils.RectangleTransformations;
import com.iqser.red.service.redaction.v1.server.utils.RedactionSearchUtility;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
public interface SemanticNode {
@@ -61,6 +63,7 @@ public interface SemanticNode {
return getTextBlock().getPages();
}
/**
* Finds the first page associated with this Node.
*
@@ -79,13 +82,19 @@ public interface SemanticNode {
*/
default Set<Page> getPages(TextRange textRange) {
if (!getTextRange().contains(textRange)) {
throw new IllegalArgumentException(format("%s which was used to query for pages is not contained in the %s of this node!", textRange, getTextRange()));
if (!getTextRange().intersects(textRange)) {
throw new IllegalArgumentException(format("%s which was used to query for pages is not intersected in the %s of this node!", textRange, getTextRange()));
}
return getTextBlock().getPages(textRange);
}
/**
* Checks if the given page number exists in the list of pages.
*
* @param pageNumber the page number to be checked
* @return true if the page number exists, otherwise false
*/
default boolean onPage(int pageNumber) {
return getPages().stream().anyMatch(page -> page.getNumber() == pageNumber);
@@ -240,7 +249,7 @@ public interface SemanticNode {
*/
default boolean hasEntitiesOfType(String type) {
return getEntities().stream().filter(TextEntity::active).anyMatch(redactionEntity -> redactionEntity.getType().equals(type));
return getEntities().stream().filter(TextEntity::active).anyMatch(redactionEntity -> redactionEntity.type().equals(type));
}
@@ -253,7 +262,7 @@ public interface SemanticNode {
*/
default boolean hasEntitiesOfAnyType(String... types) {
return getEntities().stream().filter(TextEntity::active).anyMatch(redactionEntity -> Arrays.stream(types).anyMatch(type -> redactionEntity.getType().equals(type)));
return getEntities().stream().filter(TextEntity::active).anyMatch(redactionEntity -> Arrays.stream(types).anyMatch(type -> redactionEntity.type().equals(type)));
}
@@ -266,11 +275,7 @@ public interface SemanticNode {
*/
default boolean hasEntitiesOfAllTypes(String... types) {
return getEntities().stream()
.filter(TextEntity::active)
.map(TextEntity::getType)
.collect(Collectors.toUnmodifiableSet())
.containsAll(Arrays.stream(types).toList());
return getEntities().stream().filter(TextEntity::active).map(TextEntity::type).collect(Collectors.toUnmodifiableSet()).containsAll(Arrays.stream(types).toList());
}
@@ -283,7 +288,7 @@ public interface SemanticNode {
*/
default List<TextEntity> getEntitiesOfType(String type) {
return getEntities().stream().filter(TextEntity::active).filter(redactionEntity -> redactionEntity.getType().equals(type)).toList();
return getEntities().stream().filter(TextEntity::active).filter(redactionEntity -> redactionEntity.type().equals(type)).toList();
}
@@ -352,6 +357,13 @@ public interface SemanticNode {
return getTextBlock().getSearchText().contains(string);
}
Set<LayoutEngine> getEngines();
default void addEngine(LayoutEngine engine) {
getEngines().add(engine);
}
/**
* Checks whether this SemanticNode contains all the provided Strings.
@@ -425,6 +437,78 @@ public interface SemanticNode {
}
/**
* Checks whether this SemanticNode contains exactly the provided String as a word.
*
* @param word - String which the TextBlock might contain
* @return true, if this node's TextBlock contains string
*/
default boolean containsWord(String word) {
return getTextBlock().getWords().stream().anyMatch(s -> s.equals(word));
}
/**
* Checks whether this SemanticNode contains exactly the provided String as a word ignoring case.
*
* @param word - String which the TextBlock might contain
* @return true, if this node's TextBlock contains string
*/
default boolean containsWordIgnoreCase(String word) {
return getTextBlock().getWords().stream().map(String::toLowerCase).anyMatch(s -> s.equals(word.toLowerCase(Locale.ENGLISH)));
}
/**
* Checks whether this SemanticNode contains any of the provided Strings as a word.
*
* @param words - A List of Strings which the TextBlock might contain
* @return true, if this node's TextBlock contains any of the provided strings
*/
default boolean containsAnyWord(String... words) {
return Arrays.stream(words).anyMatch(word -> getTextBlock().getWords().stream().anyMatch(word::equals));
}
/**
* Checks whether this SemanticNode contains any of the provided Strings as a word ignoring case.
*
* @param words - A List of Strings which the TextBlock might contain
* @return true, if this node's TextBlock contains any of the provided strings
*/
default boolean containsAnyWordIgnoreCase(String... words) {
return Arrays.stream(words).map(String::toLowerCase).anyMatch(word -> getTextBlock().getWords().stream().map(String::toLowerCase).anyMatch(word::equals));
}
/**
* Checks whether this SemanticNode contains all the provided Strings as word.
*
* @param words - A List of Strings which the TextBlock might contain
* @return true, if this node's TextBlock contains all the provided strings
*/
default boolean containsAllWords(String... words) {
return Arrays.stream(words).allMatch(word -> getTextBlock().getWords().stream().anyMatch(word::equals));
}
/**
* Checks whether this SemanticNode contains all the provided Strings as word ignoring case.
*
* @param words - A List of Strings which the TextBlock might contain
* @return true, if this node's TextBlock contains all the provided strings
*/
default boolean containsAllWordsIgnoreCase(String... words) {
return Arrays.stream(words).map(String::toLowerCase).allMatch(word -> getTextBlock().getWords().stream().map(String::toLowerCase).anyMatch(word::equals));
}
/**
* Checks whether this SemanticNode matches the provided regex pattern.
*
@@ -451,10 +535,11 @@ public interface SemanticNode {
/**
* Checks whether this SemanticNode intersects the provided rectangle.
* @param x the lower left corner X value
* @param y the lower left corner Y value
* @param w width
* @param h height
*
* @param x the lower left corner X value
* @param y the lower left corner Y value
* @param w width
* @param h height
* @param pageNumber the pageNumber of the rectangle
* @return true if intersects, false otherwise
*/
@@ -477,7 +562,6 @@ public interface SemanticNode {
if (textBlock.containsTextRange(textEntity.getTextRange())) {
textEntity.setDeepestFullyContainingNode(this);
}
textEntity.addIntersectingNode(this);
streamChildren().filter(semanticNode -> semanticNode.getTextRange().intersects(textEntity.getTextRange()))
.forEach(node -> node.addThisToEntityIfIntersects(textEntity));
@@ -551,6 +635,27 @@ public interface SemanticNode {
}
/**
* For a given TextRange this function returns a List of rectangle around the text in the range.
* These Rectangles are split either by a new line or by a large gap in the current line.
* This is mainly used to find the positions of TextEntities
*
* @param textRange A TextRange to calculate the positions for.
* @return A Map, where the keys are the pages and the values are a list of rectangles describing the position of words
*/
default Map<Page, List<Rectangle2D>> getPositionsPerPage(TextRange textRange) {
if (isLeaf()) {
return getTextBlock().getPositionsPerPage(textRange);
}
Optional<SemanticNode> containingChildNode = streamChildren().filter(child -> child.getTextRange().contains(textRange)).findFirst();
if (containingChildNode.isEmpty()) {
return getTextBlock().getPositionsPerPage(textRange);
}
return containingChildNode.get().getPositionsPerPage(textRange);
}
/**
* If this Node is a Leaf it will calculate the boundingBox of its LeafTextBlock, otherwise it will calculate the Union of the BoundingBoxes of all its Children.
* If called on the Document, it will return the cropbox of each page
@@ -559,12 +664,11 @@ public interface SemanticNode {
*/
default Map<Page, Rectangle2D> getBBox() {
Map<Page, Rectangle2D> bBoxPerPage = new HashMap<>();
if (isLeaf()) {
return getBBoxFromLeafTextBlock(bBoxPerPage);
return getBBoxFromLeafTextBlock();
}
return getBBoxFromChildren(bBoxPerPage);
return getBBoxFromChildren();
}
@@ -587,28 +691,49 @@ public interface SemanticNode {
/**
* TODO: this produces unwanted results for sections spanning multiple columns.
* Computes the Union of the bounding boxes of all children recursively.
*
* @param bBoxPerPage initial empty BoundingBox
* @return The union of the BoundingBoxes of all children
*/
private Map<Page, Rectangle2D> getBBoxFromChildren(Map<Page, Rectangle2D> bBoxPerPage) {
private Map<Page, Rectangle2D> getBBoxFromChildren() {
return streamChildren().map(SemanticNode::getBBox).reduce((map1, map2) -> {
map1.forEach((page, rectangle) -> map2.merge(page, rectangle, (rect1, rect2) -> rect1.createUnion(rect2).getBounds2D()));
return map2;
}).orElse(bBoxPerPage);
Map<Page, Rectangle2D> bBoxPerPage = new HashMap<>();
List<Map<Page, Rectangle2D>> childrenBBoxes = streamChildren().map(SemanticNode::getBBox).toList();
Set<Page> pages = childrenBBoxes.stream().flatMap(map -> map.keySet().stream()).collect(Collectors.toSet());
for (Page page : pages) {
Rectangle2D bBoxOnPage = childrenBBoxes.stream()
.filter(childBboxPerPage -> childBboxPerPage.containsKey(page))
.map(childBboxPerPage -> childBboxPerPage.get(page))
.collect(RectangleTransformations.collectBBox());
bBoxPerPage.put(page, bBoxOnPage);
}
return bBoxPerPage;
}
/**
* @param bBoxPerPage initial empty BoundingBox
* @return The union of all BoundingBoxes of the TextBlock of this node
*/
private Map<Page, Rectangle2D> getBBoxFromLeafTextBlock(Map<Page, Rectangle2D> bBoxPerPage) {
private Map<Page, Rectangle2D> getBBoxFromLeafTextBlock() {
Map<Page, Rectangle2D> bBoxPerPage = new HashMap<>();
Map<Page, List<AtomicTextBlock>> atomicTextBlockPerPage = getTextBlock().getAtomicTextBlocks().stream().collect(Collectors.groupingBy(AtomicTextBlock::getPage));
atomicTextBlockPerPage.forEach((page, atomicTextBlocks) -> bBoxPerPage.put(page, RectangleTransformations.atomicTextBlockBBox(atomicTextBlocks)));
return bBoxPerPage;
}
}
/**
* Accepts a {@link NodeVisitor} and initiates a depth-first traversal of the semantic tree rooted at this node.
* The visitor's {@link NodeVisitor#visit(SemanticNode)} method is invoked for each node encountered during the traversal.
*
* @param visitor The {@link NodeVisitor} to accept and apply during the traversal.
* @see NodeVisitor
*/
default void accept(NodeVisitor visitor) {
visitor.visit(this);
streamChildren().forEach(childNode -> childNode.accept(visitor));
}
}
@@ -2,11 +2,14 @@ package com.iqser.red.service.redaction.v1.server.model.document.nodes;
import static java.lang.String.format;
import java.awt.geom.Rectangle2D;
import java.util.Collection;
import java.util.HashSet;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import java.util.stream.IntStream;
import java.util.stream.Stream;
@@ -14,6 +17,7 @@ import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlockCollector;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -26,8 +30,12 @@ import lombok.experimental.FieldDefaults;
@Builder
@AllArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class Table implements SemanticNode {
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
DocumentTree documentTree;
@@ -37,9 +45,20 @@ public class Table implements SemanticNode {
TextBlock textBlock;
@Builder.Default
@EqualsAndHashCode.Exclude
Set<TextEntity> entities = new HashSet<>();
Map<Page, Rectangle2D> bBoxCache;
@Override
public Map<Page, Rectangle2D> getBBox() {
if (bBoxCache == null) {
bBoxCache = SemanticNode.super.getBBox();
}
return bBoxCache;
}
/**
* Streams all entities in this table, that appear in a row, which contains any of the provided strings.
@@ -49,8 +68,7 @@ public class Table implements SemanticNode {
*/
public Stream<TextEntity> streamEntitiesWhereRowContainsStringsIgnoreCase(List<String> strings) {
return IntStream.range(0, numberOfRows)
.boxed()
return IntStream.range(0, numberOfRows).boxed()
.filter(row -> rowContainsStringsIgnoreCase(row, strings))
.flatMap(this::streamRow)
.map(TableCell::getEntities)
@@ -67,8 +85,11 @@ public class Table implements SemanticNode {
*/
public boolean rowContainsStringsIgnoreCase(Integer row, List<String> strings) {
String rowText = streamRow(row).map(TableCell::getTextBlock).collect(new TextBlockCollector()).getSearchText().toLowerCase(Locale.ROOT);
return strings.stream().map(String::toLowerCase).allMatch(rowText::contains);
String rowText = streamRow(row).map(TableCell::getTextBlock)
.collect(new TextBlockCollector()).getSearchText().toLowerCase(Locale.ROOT);
return strings.stream()
.map(String::toLowerCase)
.allMatch(rowText::contains);
}
@@ -81,9 +102,13 @@ public class Table implements SemanticNode {
*/
public Stream<TextEntity> streamEntitiesWhereRowHasHeaderAndValue(String header, String value) {
List<Integer> vertebrateStudyCols = streamHeaders().filter(headerNode -> headerNode.containsString(header)).map(TableCell::getCol).toList();
List<Integer> vertebrateStudyCols = streamHeaders().filter(headerNode -> headerNode.containsString(header))
.map(TableCell::getCol)
.toList();
return streamTableCells().filter(tableCellNode -> vertebrateStudyCols.stream()
.anyMatch(vertebrateStudyCol -> getCell(tableCellNode.getRow(), vertebrateStudyCol).containsString(value))).map(TableCell::getEntities).flatMap(Collection::stream);
.anyMatch(vertebrateStudyCol -> getCell(tableCellNode.getRow(), vertebrateStudyCol).containsString(value)))
.map(TableCell::getEntities)
.flatMap(Collection::stream);
}
@@ -96,9 +121,13 @@ public class Table implements SemanticNode {
*/
public Stream<TextEntity> streamEntitiesWhereRowHasHeaderAndAnyValue(String header, List<String> values) {
List<Integer> colsWithHeader = streamHeaders().filter(headerNode -> headerNode.containsString(header)).map(TableCell::getCol).toList();
List<Integer> colsWithHeader = streamHeaders().filter(headerNode -> headerNode.containsString(header))
.map(TableCell::getCol)
.toList();
return streamTableCells().filter(tableCellNode -> colsWithHeader.stream()
.anyMatch(colWithHeader -> getCell(tableCellNode.getRow(), colWithHeader).containsAnyString(values))).map(TableCell::getEntities).flatMap(Collection::stream);
.anyMatch(colWithHeader -> getCell(tableCellNode.getRow(), colWithHeader).containsAnyString(values)))
.map(TableCell::getEntities)
.flatMap(Collection::stream);
}
@@ -111,16 +140,33 @@ public class Table implements SemanticNode {
*/
public Stream<TextEntity> streamEntitiesWhereRowContainsEntitiesOfType(List<String> types) {
List<Integer> rowsWithEntityOfType = getEntities().stream()
.filter(TextEntity::active)
.filter(redactionEntity -> types.stream().anyMatch(type -> type.equals(redactionEntity.getType())))
.map(TextEntity::getIntersectingNodes)
.filter(node -> node instanceof TableCell)
.map(node -> (TableCell) node)
.map(TableCell::getRow)
.toList();
return IntStream.range(0, numberOfRows).boxed()
.filter(rowNumber -> streamTextEntitiesInRow(rowNumber).map(TextEntity::type)
.anyMatch(types::contains))
.flatMap(this::streamRow)
.map(TableCell::getEntities)
.flatMap(Collection::stream);
}
return rowsWithEntityOfType.stream().flatMap(this::streamRow).map(TableCell::getEntities).flatMap(Collection::stream);
/**
* Streams all entities in this table, that appear in a row, which contains at least one entity of each of the provided types.
* Ignores Entity with ignored == true or removed == true.
*
* @param types type strings to check whether a row contains an entity like them
* @return Stream of all entities in this table, that appear in a row, which contains at least one entity of each of the provided types.
*/
public Stream<TextEntity> streamEntitiesWhereRowContainsEntitiesOfEachType(List<String> types) {
return IntStream.range(0, numberOfRows).boxed()
.filter(rowNumber -> {
Set<String> entityTypes = streamTextEntitiesInRow(rowNumber).map(TextEntity::type)
.collect(Collectors.toSet());
return entityTypes.containsAll(types);
})
.flatMap(this::streamRow)
.map(TableCell::getEntities)
.flatMap(Collection::stream);
}
@@ -133,18 +179,43 @@ public class Table implements SemanticNode {
*/
public Stream<TextEntity> streamEntitiesWhereRowContainsNoEntitiesOfType(List<String> types) {
return IntStream.range(0, numberOfRows)
.boxed()
.filter(rowNumber -> streamRow(rowNumber).map(TableCell::getEntities)
.flatMap(Collection::stream)
.filter(TextEntity::active)
.noneMatch(entity -> types.contains(entity.getType())))
return IntStream.range(0, numberOfRows).boxed()
.filter(rowNumber -> streamTextEntitiesInRow(rowNumber).map(TextEntity::type)
.noneMatch(types::contains))
.flatMap(this::streamRow)
.map(TableCell::getEntities)
.flatMap(Collection::stream);
}
/**
* Streams all Entities in the given row.
*
* @param rowNumber the row number to look for
* @return stream of TextEntities occurring in row
*/
public Stream<TextEntity> streamTextEntitiesInRow(int rowNumber) {
return streamRow(rowNumber).map(TableCell::getEntities)
.flatMap(Collection::stream)
.filter(TextEntity::active);
}
/**
* Streams all Entities in the given col.
*
* @param colNumber the column number to look for
* @return stream of TextEntities occurring in row
*/
public Stream<TextEntity> streamTextEntitiesInCol(int colNumber) {
return streamCol(colNumber).map(TableCell::getEntities)
.flatMap(Collection::stream)
.filter(TextEntity::active);
}
/**
* Returns a TableCell at the provided row and column location.
*
@@ -158,7 +229,8 @@ public class Table implements SemanticNode {
throw new IllegalArgumentException(format("row %d, col %d is out of bounds for number of rows of %d and number of cols %d", row, col, numberOfRows, numberOfCols));
}
int idx = row * numberOfCols + col;
return (TableCell) documentTree.getEntryById(treeId).getChildren().get(idx).getNode();
return (TableCell) documentTree.getEntryById(treeId).getChildren()
.get(idx).getNode();
}
@@ -173,6 +245,18 @@ public class Table implements SemanticNode {
}
/**
* Streams all TableCells that contain at least one entity of a given type in this Table row-wise.
*
* @param type The type of the entity
* @return Stream of filtered TableCells
*/
public Stream<TableCell> streamTableCellsWhichContainType(String type) {
return streamTableCells().filter(tableCell -> tableCell.hasEntitiesOfType(type));
}
/**
* Streams all TableCells in this Table which have the provided header row-wise.
*
@@ -195,7 +279,8 @@ public class Table implements SemanticNode {
*/
public Stream<TableCell> streamCol(int col) {
return IntStream.range(0, numberOfRows).boxed().map(row -> getCell(row, col));
return IntStream.range(0, numberOfRows).boxed()
.map(row -> getCell(row, col));
}
@@ -207,7 +292,8 @@ public class Table implements SemanticNode {
*/
public Stream<TableCell> streamRow(int row) {
return IntStream.range(0, numberOfCols).boxed().map(col -> getCell(row, col));
return IntStream.range(0, numberOfCols).boxed()
.map(col -> getCell(row, col));
}
@@ -231,7 +317,8 @@ public class Table implements SemanticNode {
*/
public Stream<TableCell> streamHeadersForCell(int row, int col) {
return Stream.concat(streamRow(row), streamCol(col)).filter(TableCell::isHeader);
return Stream.concat(streamRow(row), streamCol(col))
.filter(TableCell::isHeader);
}
@@ -255,7 +342,11 @@ public class Table implements SemanticNode {
*/
public boolean hasHeaderIgnoreCase(String header) {
return streamHeaders().anyMatch(tableCellNode -> tableCellNode.getTextBlock().getSearchText().strip().toLowerCase(Locale.ENGLISH).equals(header.toLowerCase(Locale.ENGLISH)));
return streamHeaders().anyMatch(tableCellNode -> tableCellNode.getTextBlock()
.getSearchText()
.strip()
.toLowerCase(Locale.ENGLISH)
.equals(header.toLowerCase(Locale.ENGLISH)));
}
@@ -289,7 +380,7 @@ public class Table implements SemanticNode {
* Finds all entities of the provided type, which appear in the same row that the provided entity appears in.
* Ignores Entity with ignored == true or removed == true.
*
* @param type the type of entities to search for
* @param type the type of entities to search for
* @param textEntity the entity, which appears in the row to search
* @return List of all entities of the provided type, which appear in the same row that the provided entity appears in.
*/
@@ -317,7 +408,9 @@ public class Table implements SemanticNode {
public TextBlock getTextBlock() {
if (textBlock == null) {
textBlock = streamAllSubNodes().filter(SemanticNode::isLeaf).map(SemanticNode::getLeafTextBlock).collect(new TextBlockCollector());
textBlock = streamAllSubNodes().filter(SemanticNode::isLeaf)
.map(SemanticNode::getLeafTextBlock)
.collect(new TextBlockCollector());
}
return textBlock;
}
@@ -11,6 +11,7 @@ import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntit
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlockCollector;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.LayoutEngine;
import lombok.AccessLevel;
import lombok.AllArgsConstructor;
@@ -23,8 +24,13 @@ import lombok.experimental.FieldDefaults;
@Builder
@AllArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
@EqualsAndHashCode(onlyExplicitlyIncluded = true)
public class TableCell implements GenericSemanticNode {
@Builder.Default
Set<LayoutEngine> engines = new HashSet<>(Set.of(LayoutEngine.ALGORITHM));
@EqualsAndHashCode.Include
List<Integer> treeId;
int row;
int col;
@@ -36,11 +42,9 @@ public class TableCell implements GenericSemanticNode {
TextBlock textBlock;
@EqualsAndHashCode.Exclude
DocumentTree documentTree;
@Builder.Default
@EqualsAndHashCode.Exclude
Set<TextEntity> entities = new HashSet<>();
@@ -3,11 +3,14 @@ package com.iqser.red.service.redaction.v1.server.model.document.textblock;
import static java.lang.String.format;
import java.awt.geom.Rectangle2D;
import java.text.BreakIterator;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.Collection;
import java.util.Collections;
import java.util.HashMap;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
@@ -40,6 +43,7 @@ public class AtomicTextBlock implements TextBlock {
//string coordinates
TextRange textRange;
String searchText;
List<String> words;
List<Integer> lineBreaks;
//position coordinates
@@ -114,6 +118,20 @@ public class AtomicTextBlock implements TextBlock {
return new TextRange(lineBreaks.get(lineNumber - 1) + textRange.start(), lineBreaks.get(lineNumber) + textRange.start());
}
public List<String> getWords() {
if (words == null) {
words = new ArrayList<>();
BreakIterator iterator = BreakIterator.getWordInstance(Locale.ENGLISH);
iterator.setText(searchText);
int start = iterator.first();
for (int end = iterator.next(); end != BreakIterator.DONE; start = end, end = iterator.next()) {
words.add(searchText.substring(start, end));
}
}
return words;
}
@Override
public List<AtomicTextBlock> getAtomicTextBlocks() {
@@ -7,6 +7,7 @@ import java.util.Collections;
import java.util.HashMap;
import java.util.LinkedList;
import java.util.List;
import java.util.Collection;
import java.util.Map;
import java.util.stream.Stream;
@@ -70,7 +71,16 @@ public class ConcatenatedTextBlock implements TextBlock {
private List<AtomicTextBlock> getAllAtomicTextBlocksPartiallyInStringBoundary(TextRange textRange) {
return atomicTextBlocks.stream().filter(tb -> tb.getTextRange().intersects(textRange)).toList();
List<AtomicTextBlock> intersectingAtomicTextBlocks = new LinkedList<>();
for (AtomicTextBlock atomicTextBlock : atomicTextBlocks) {
if (atomicTextBlock.getTextRange().start() > textRange.end()) {
break; // early stop, following TextBlocks will never intersect
}
if (atomicTextBlock.getTextRange().intersects(textRange)) {
intersectingAtomicTextBlocks.add(atomicTextBlock);
}
}
return intersectingAtomicTextBlocks;
}
@@ -86,6 +96,13 @@ public class ConcatenatedTextBlock implements TextBlock {
}
@Override
public List<String> getWords() {
return atomicTextBlocks.stream().map(AtomicTextBlock::getWords).flatMap(Collection::stream).toList();
}
@Override
public int numberOfLines() {
@@ -114,13 +131,13 @@ public class ConcatenatedTextBlock implements TextBlock {
}
@Override
public Rectangle2D getPosition(int stringIdx) {
return getAtomicTextBlockByStringIndex(stringIdx).getPosition(stringIdx);
}
public TextRange getLineTextRange(int lineNumber) {
if (atomicTextBlocks.size() == 1) {
@@ -136,10 +153,10 @@ public class ConcatenatedTextBlock implements TextBlock {
return new TextRange(textRange.start(), textRange.start());
}
@Override
public List<Rectangle2D> getPositions(TextRange stringTextRange) {
List<AtomicTextBlock> textBlocks = getAllAtomicTextBlocksPartiallyInStringBoundary(stringTextRange);
if (textBlocks.isEmpty()) {
@@ -18,6 +18,7 @@ public interface TextBlock extends CharSequence {
String getSearchText();
List<String> getWords();
List<AtomicTextBlock> getAtomicTextBlocks();
@@ -1,5 +1,6 @@
package com.iqser.red.service.redaction.v1.server.model.drools;
import org.drools.drl.ast.descr.AttributeDescr;
import org.drools.drl.ast.descr.RuleDescr;
import lombok.AccessLevel;
@@ -18,6 +19,7 @@ public class BasicRule {
RuleIdentifier identifier;
String name;
String code;
String agendaGroup;
int line;
@@ -26,7 +28,8 @@ public class BasicRule {
RuleIdentifier identifier = RuleIdentifier.fromName(rule.getName());
String nameWithoutIdentifier = rule.getName().replace(identifier + ":", "");
String code = rulesString.substring(rule.getStartCharacter(), rule.getEndCharacter());
return new BasicRule(identifier, nameWithoutIdentifier, code, rule.getLine());
String agendaGroup = rule.getAttributes().getOrDefault("agenda-group", new AttributeDescr("agenda-group", "DEFAULT")).getValue();
return new BasicRule(identifier, nameWithoutIdentifier, code, agendaGroup, rule.getLine());
}
@@ -1,10 +1,12 @@
package com.iqser.red.service.redaction.v1.server.model.drools;
import java.util.Arrays;
import java.util.Collection;
import java.util.Collections;
import java.util.List;
import java.util.Objects;
import java.util.Optional;
import java.util.Set;
import java.util.stream.Collectors;
import java.util.stream.Stream;
@@ -39,6 +41,12 @@ public final class RuleFileBluePrint {
}
public Set<String> getImportSplitByKeyword() {
return Arrays.stream(imports.replaceAll("\n", "").split("import")).map(String::trim).collect(Collectors.toSet());
}
public List<BasicRule> findRulesByIdentifier(RuleIdentifier ruleIdentifier) {
if (Objects.isNull(ruleIdentifier.unit())) {
@@ -2,7 +2,6 @@ package com.iqser.red.service.redaction.v1.server.model.drools;
import java.util.regex.Pattern;
public record RuleType(String name) {
static Pattern alphaNumeric = Pattern.compile("^[a-zA-Z0-9]+$");
@@ -1,13 +1,11 @@
package com.iqser.red.service.redaction.v1.server.queue;
import static com.iqser.red.service.redaction.v1.server.queue.MessagingConfiguration.REDACTION_QUEUE;
import static com.iqser.red.service.redaction.v1.model.QueueNames.REDACTION_QUEUE;
import org.springframework.amqp.core.Message;
import org.springframework.amqp.rabbit.annotation.RabbitHandler;
import org.springframework.amqp.rabbit.annotation.RabbitListener;
import com.fasterxml.jackson.core.JsonProcessingException;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@@ -1,6 +1,11 @@
package com.iqser.red.service.redaction.v1.server.queue;
import lombok.RequiredArgsConstructor;
import static com.iqser.red.service.redaction.v1.model.QueueNames.MIGRATION_DLQ;
import static com.iqser.red.service.redaction.v1.model.QueueNames.MIGRATION_QUEUE;
import static com.iqser.red.service.redaction.v1.model.QueueNames.REDACTION_ANALYSIS_RESPONSE_QUEUE;
import static com.iqser.red.service.redaction.v1.model.QueueNames.REDACTION_DQL;
import static com.iqser.red.service.redaction.v1.model.QueueNames.REDACTION_PRIORITY_QUEUE;
import static com.iqser.red.service.redaction.v1.model.QueueNames.REDACTION_QUEUE;
import org.springframework.amqp.core.Queue;
import org.springframework.amqp.core.QueueBuilder;
@@ -8,15 +13,12 @@ import org.springframework.boot.autoconfigure.condition.ConditionalOnProperty;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
import lombok.RequiredArgsConstructor;
@Configuration
@RequiredArgsConstructor
public class MessagingConfiguration {
public static final String REDACTION_QUEUE = "redactionQueue";
public static final String REDACTION_DQL = "redactionDQL";
public static final String REDACTION_PRIORITY_QUEUE = "redactionPriorityQueue";
public static final String X_ERROR_INFO_HEADER = "x-error-message";
public static final String X_ERROR_INFO_TIMESTAMP_HEADER = "x-error-message-timestamp";
@@ -37,6 +39,20 @@ public class MessagingConfiguration {
}
@Bean
public Queue migrationQueue() {
return QueueBuilder.durable(MIGRATION_QUEUE).withArgument("x-dead-letter-exchange", "").withArgument("x-dead-letter-routing-key", MIGRATION_DLQ).maxPriority(2).build();
}
@Bean
public Queue migrationDLQ() {
return QueueBuilder.durable(MIGRATION_DLQ).build();
}
@Bean
public Queue redactionQueue() {
@@ -54,6 +70,16 @@ public class MessagingConfiguration {
.build();
}
@Bean
public Queue redactionAnalysisResponseQueue() {
return QueueBuilder.durable(REDACTION_ANALYSIS_RESPONSE_QUEUE)
.withArgument("x-dead-letter-exchange", "")
.withArgument("x-dead-letter-routing-key", REDACTION_DQL)
.maxPriority(2)
.build();
}
@Bean
public Queue redactionDeadLetterQueue() {
@@ -1,13 +1,11 @@
package com.iqser.red.service.redaction.v1.server.queue;
import static com.iqser.red.service.redaction.v1.server.queue.MessagingConfiguration.REDACTION_PRIORITY_QUEUE;
import static com.iqser.red.service.redaction.v1.model.QueueNames.REDACTION_PRIORITY_QUEUE;
import org.springframework.amqp.core.Message;
import org.springframework.amqp.rabbit.annotation.RabbitHandler;
import org.springframework.amqp.rabbit.annotation.RabbitListener;
import com.fasterxml.jackson.core.JsonProcessingException;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@@ -1,8 +1,8 @@
package com.iqser.red.service.redaction.v1.server.queue;
import static com.iqser.red.service.redaction.v1.server.queue.MessagingConfiguration.REDACTION_DQL;
import static com.iqser.red.service.redaction.v1.server.queue.MessagingConfiguration.REDACTION_PRIORITY_QUEUE;
import static com.iqser.red.service.redaction.v1.server.queue.MessagingConfiguration.REDACTION_QUEUE;
import static com.iqser.red.service.redaction.v1.model.QueueNames.REDACTION_DQL;
import static com.iqser.red.service.redaction.v1.model.QueueNames.REDACTION_PRIORITY_QUEUE;
import static com.iqser.red.service.redaction.v1.model.QueueNames.REDACTION_QUEUE;
import static com.iqser.red.service.redaction.v1.server.queue.MessagingConfiguration.X_ERROR_INFO_HEADER;
import static com.iqser.red.service.redaction.v1.server.queue.MessagingConfiguration.X_ERROR_INFO_TIMESTAMP_HEADER;
import static java.lang.String.format;
@@ -23,8 +23,9 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeResu
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.dossier.file.FileErrorInfo;
import com.iqser.red.service.redaction.v1.server.client.FileStatusProcessingUpdateClient;
import com.iqser.red.service.redaction.v1.server.client.RulesClient;
import com.iqser.red.service.redaction.v1.server.utils.exception.DroolsTimeoutException;
import com.iqser.red.service.redaction.v1.server.service.AnalyzeService;
import com.iqser.red.service.redaction.v1.server.service.UnprocessedChangesService;
import com.iqser.red.service.redaction.v1.server.utils.exception.DroolsTimeoutException;
import lombok.RequiredArgsConstructor;
import lombok.SneakyThrows;
@@ -39,6 +40,7 @@ public class RedactionMessageReceiver {
private final AnalyzeService analyzeService;
private final FileStatusProcessingUpdateClient fileStatusProcessingUpdateClient;
private final RulesClient rulesClient;
private final UnprocessedChangesService unprocessedChangesService;
@SneakyThrows
@@ -70,7 +72,8 @@ public class RedactionMessageReceiver {
log.info("");
log.info("Processing AnalyzeRequest for file: {}, priority: {} ", analyzeRequest.getFileId(), priority);
log.info("");
AnalyzeResult result;
AnalyzeResult result = new AnalyzeResult();
boolean shouldRespond = true;
try {
switch (analyzeRequest.getMessageType()) {
@@ -98,13 +101,26 @@ public class RedactionMessageReceiver {
format("%.2f", result.getDuration() / 1000.0));
log.info("----------------------------------------------------------------------------------");
break;
case SURROUNDING_TEXT_ANALYSIS:
log.info("------------------------------Surrounding Text Analysis------------------------------------------");
log.info("Starting Surrounding Text Analysis for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
log.debug(analyzeRequest.getManualRedactions().toString());
unprocessedChangesService.analyseSurroundingText(analyzeRequest);
log.info("Successful Surrounding Text Analysis dossier {} file {} ",
analyzeRequest.getDossierId(),
analyzeRequest.getFileId());
log.info("-------------------------------------------------------------------------------------------------");
shouldRespond = false;
break;
default:
throw new IllegalArgumentException("Unknown MessageType: " + analyzeRequest.getMessageType());
}
log.info("");
result.setMessageType(analyzeRequest.getMessageType());
fileStatusProcessingUpdateClient.analysisSuccessful(analyzeRequest.getDossierId(), analyzeRequest.getFileId(), result);
if (shouldRespond) {
result.setMessageType(analyzeRequest.getMessageType());
fileStatusProcessingUpdateClient.analysisSuccessful(analyzeRequest.getDossierId(), analyzeRequest.getFileId(), result);
}
} catch (DroolsTimeoutException droolsTimeoutException) {
if (!droolsTimeoutException.isReported()) {
rulesClient.setRulesTimeoutDetected(analyzeRequest.getDossierTemplateId(), droolsTimeoutException.getRuleFileType());
@@ -128,7 +144,7 @@ public class RedactionMessageReceiver {
@RabbitHandler
@RabbitListener(queues = REDACTION_DQL)
public void receiveAnalyzeRequestDQL(Message in) throws IOException {
public void receiveAnalyzeRequestDLQ(Message in) throws IOException {
var analyzeRequest = objectMapper.readValue(in.getBody(), AnalyzeRequest.class);
log.info("Failed to process analyze request: {}", analyzeRequest);
@@ -1,11 +1,13 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.util.Collection;
import java.util.Collections;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import java.util.stream.Stream;
import org.springframework.stereotype.Service;
import org.springframework.web.bind.annotation.RequestBody;
@@ -18,7 +20,7 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.RuleFileTyp
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.componentlog.ComponentLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogChanges;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Comment;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.dossier.file.FileType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.legalbasis.LegalBasis;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
@@ -29,7 +31,7 @@ import com.iqser.red.service.redaction.v1.server.RedactionServiceSettings;
import com.iqser.red.service.redaction.v1.server.client.LegalBasisClient;
import com.iqser.red.service.redaction.v1.server.client.model.NerEntitiesModel;
import com.iqser.red.service.redaction.v1.server.model.KieWrapper;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.NerEntities;
import com.iqser.red.service.redaction.v1.server.model.component.Component;
import com.iqser.red.service.redaction.v1.server.model.dictionary.Dictionary;
@@ -38,15 +40,18 @@ import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryVers
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.service.document.DocumentGraphMapper;
import com.iqser.red.service.redaction.v1.server.service.document.ImportedRedactionEntryService;
import com.iqser.red.service.redaction.v1.server.service.document.ManualRedactionEntryService;
import com.iqser.red.service.redaction.v1.server.service.document.NerEntitiesAdapter;
import com.iqser.red.service.redaction.v1.server.service.document.SectionFinderService;
import com.iqser.red.service.redaction.v1.server.service.drools.ComponentDroolsExecutionService;
import com.iqser.red.service.redaction.v1.server.service.drools.EntityDroolsExecutionService;
import com.iqser.red.service.redaction.v1.server.service.drools.KieContainerCreationService;
import com.iqser.red.service.redaction.v1.server.storage.ObservedStorageService;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import io.micrometer.core.annotation.Timed;
import io.micrometer.observation.annotation.Observed;
import lombok.AccessLevel;
import lombok.RequiredArgsConstructor;
import lombok.SneakyThrows;
@@ -59,113 +64,123 @@ import lombok.extern.slf4j.Slf4j;
@RequiredArgsConstructor
public class AnalyzeService {
private static final String REDACTMANAGER_ANALYZE_PAGEWISE_METRIC_NAME = "redactmanager_analyze.pagewise";
DictionaryService dictionaryService;
EntityDroolsExecutionService entityDroolsExecutionService;
ComponentDroolsExecutionService componentDroolsExecutionService;
KieContainerCreationService kieContainerCreationService;
DictionarySearchService dictionarySearchService;
RedactionLogCreatorService redactionLogCreatorService;
EntityLogCreatorService entityLogCreatorService;
ComponentLogCreatorService componentLogCreatorService;
RedactionStorageService redactionStorageService;
RedactionChangeLogService redactionChangeLogService;
EntityChangeLogService entityChangeLogService;
LegalBasisClient legalBasisClient;
RedactionServiceSettings redactionServiceSettings;
ImportedRedactionService importedRedactionService;
NotFoundImportedEntitiesService notFoundImportedEntitiesService;
SectionFinderService sectionFinderService;
ManualRedactionEntryService manualRedactionEntryService;
ImportedRedactionEntryService importedRedactionEntryService;
ObservedStorageService observedStorageService;
FunctionTimerValues redactmanagerAnalyzePagewiseValues;
@Timed("redactmanager_reanalyze")
@SneakyThrows
@Observed(name = "AnalyzeService", contextualName = "reanalyze")
public AnalyzeResult reanalyze(@RequestBody AnalyzeRequest analyzeRequest) {
long startTime = System.currentTimeMillis();
RedactionLog previousRedactionLog = redactionStorageService.getRedactionLog(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
EntityLog previousEntityLog = redactionStorageService.getEntityLog(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
log.info("Loaded previous entity log for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
ComponentLog previousComponentLog = new ComponentLog();
Document document = DocumentGraphMapper.toDocumentGraph(redactionStorageService.getDocumentData(analyzeRequest.getDossierId(), analyzeRequest.getFileId()));
Document document = DocumentGraphMapper.toDocumentGraph(observedStorageService.getDocumentData(analyzeRequest.getDossierId(), analyzeRequest.getFileId()));
log.info("Loaded Document Graph for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
ImportedRedactions importedRedactions = redactionStorageService.getImportedRedactions(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
log.info("Loaded Imported Redactions for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
// not yet ready for reanalysis
if (previousEntityLog == null || document == null || document.getNumberOfPages() == 0) {
return analyze(analyzeRequest);
}
DictionaryIncrement dictionaryIncrement = dictionaryService.getDictionaryIncrements(analyzeRequest.getDossierTemplateId(),
new DictionaryVersion(previousEntityLog.getDictionaryVersion(), previousEntityLog.getDossierDictionaryVersion()),
analyzeRequest.getDossierId());
new DictionaryVersion(previousEntityLog.getDictionaryVersion(),
previousEntityLog.getDossierDictionaryVersion()),
analyzeRequest.getDossierId());
Set<Integer> sectionsToReanalyseIds = getSectionsToReanalyseIds(analyzeRequest, previousEntityLog, document, dictionaryIncrement);
Set<Integer> sectionsToReanalyseIds = getSectionsToReanalyseIds(analyzeRequest, previousEntityLog, document, dictionaryIncrement, importedRedactions);
List<SemanticNode> sectionsToReAnalyse = getSectionsToReAnalyse(document, sectionsToReanalyseIds);
log.info("{} Sections to reanalyze found for file {} in dossier {}", sectionsToReanalyseIds.size(), analyzeRequest.getFileId(), analyzeRequest.getDossierId());
if (sectionsToReAnalyse.isEmpty()) {
EntityLogChanges entityLogChanges = entityLogCreatorService.updateVersionsAndReturnChanges(previousEntityLog,
dictionaryIncrement.getDictionaryVersion(),
analyzeRequest,
false);
return finalizeAnalysis(analyzeRequest,
startTime,
kieContainerCreationService.getLatestKieContainer(analyzeRequest.getDossierTemplateId(), RuleFileType.COMPONENT),
entityLogCreatorService.updateVersionsAndReturnChanges(previousEntityLog,
dictionaryIncrement.getDictionaryVersion(),
analyzeRequest.getDossierTemplateId(), false), document,
previousRedactionLog,
document.getNumberOfPages(),
dictionaryIncrement.getDictionaryVersion(),
true,
Collections.emptySet());
startTime,
kieContainerCreationService.getLatestKieContainer(analyzeRequest.getDossierTemplateId(), RuleFileType.COMPONENT),
entityLogChanges,
document,
document.getNumberOfPages(),
dictionaryIncrement.getDictionaryVersion(),
true,
Collections.emptySet());
}
KieWrapper kieWrapperEntityRules = kieContainerCreationService.getLatestKieContainer(analyzeRequest.getDossierTemplateId(), RuleFileType.ENTITY);
log.info("Updated entity rules to version {} for file {} in dossier {}", kieWrapperEntityRules.rulesVersion(), analyzeRequest.getFileId(), analyzeRequest.getDossierId());
NerEntities nerEntities = getEntityRecognitionEntitiesFilteredBySectionIds(analyzeRequest, document, sectionsToReanalyseIds);
log.info("Loaded Ner Entities for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
List<ManualEntity> notFoundManualRedactionEntries = manualRedactionEntryService.addManualRedactionEntriesAndReturnNotFoundEntries(analyzeRequest,
document,
analyzeRequest.getDossierTemplateId());
var notFoundManualRedactionEntries = manualRedactionEntryService.addManualRedactionEntriesAndReturnNotFoundEntries(analyzeRequest,
document,
analyzeRequest.getDossierTemplateId());
var notFoundImportedEntries = importedRedactionEntryService.addImportedEntriesAndReturnNotFoundEntries(analyzeRequest, importedRedactions, document);
var notFoundManualOrImportedEntries = Stream.of(notFoundManualRedactionEntries, notFoundImportedEntries)
.flatMap(Collection::stream)
.collect(Collectors.toList());
Dictionary dictionary = dictionaryService.getDeepCopyDictionary(analyzeRequest.getDossierTemplateId(), analyzeRequest.getDossierId());
log.info("Updated Dictionaries for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
sectionsToReAnalyse.forEach(node -> dictionarySearchService.addDictionaryEntities(dictionary, node));
dictionarySearchService.addDictionaryEntities(dictionary, sectionsToReAnalyse);
log.info("Finished Dictionary Search for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
// we could add the imported redactions similar to the manual redactions here as well for additional processing
List<FileAttribute> allFileAttributes = entityDroolsExecutionService.executeRules(kieWrapperEntityRules.container(),
document,
sectionsToReAnalyse,
dictionary,
analyzeRequest.getFileAttributes(),
analyzeRequest.getManualRedactions(),
nerEntities);
document,
sectionsToReAnalyse,
dictionary,
analyzeRequest.getFileAttributes(),
analyzeRequest.getManualRedactions(),
nerEntities);
log.info("Finished entity rule execution for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
RedactionLog redactionLog = updatePreviousRedactionLog(analyzeRequest, document, notFoundManualRedactionEntries, previousRedactionLog, sectionsToReanalyseIds);
EntityLogChanges entityLogChanges = entityLogCreatorService.updatePreviousEntityLog(analyzeRequest,
document,
notFoundManualRedactionEntries,
previousEntityLog,
sectionsToReanalyseIds,
dictionary.getVersion());
document,
notFoundManualOrImportedEntries,
previousEntityLog,
sectionsToReanalyseIds,
dictionary.getVersion());
notFoundImportedEntitiesService.processEntityLog(entityLogChanges.getEntityLog(), analyzeRequest, notFoundImportedEntries);
return finalizeAnalysis(analyzeRequest,
startTime,
kieContainerCreationService.getLatestKieContainer(analyzeRequest.getDossierTemplateId(), RuleFileType.COMPONENT), entityLogChanges, document,
redactionLog,
document.getNumberOfPages(),
dictionaryIncrement.getDictionaryVersion(),
true,
new HashSet<>(allFileAttributes));
startTime,
kieContainerCreationService.getLatestKieContainer(analyzeRequest.getDossierTemplateId(), RuleFileType.COMPONENT),
entityLogChanges,
document,
document.getNumberOfPages(),
dictionaryIncrement.getDictionaryVersion(),
true,
new HashSet<>(allFileAttributes));
}
@Timed("redactmanager_analyze")
@Observed(name = "AnalyzeService", contextualName = "analyze")
public AnalyzeResult analyze(AnalyzeRequest analyzeRequest) {
long startTime = System.currentTimeMillis();
@@ -176,9 +191,12 @@ public class AnalyzeService {
var kieWrapperComponentRules = kieContainerCreationService.getLatestKieContainer(analyzeRequest.getDossierTemplateId(), RuleFileType.COMPONENT);
log.info("Updated Rules to Version {} for file {} in dossier {}", kieWrapperEntityRules.rulesVersion(), analyzeRequest.getFileId(), analyzeRequest.getDossierId());
Document document = DocumentGraphMapper.toDocumentGraph(redactionStorageService.getDocumentData(analyzeRequest.getDossierId(), analyzeRequest.getFileId()));
Document document = DocumentGraphMapper.toDocumentGraph(observedStorageService.getDocumentData(analyzeRequest.getDossierId(), analyzeRequest.getFileId()));
log.info("Loaded Document Graph for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
ImportedRedactions importedRedactions = redactionStorageService.getImportedRedactions(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
log.info("Loaded Imported Redactions for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
NerEntities nerEntities = getEntityRecognitionEntities(analyzeRequest, document);
log.info("Loaded Ner Entities for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
@@ -186,71 +204,56 @@ public class AnalyzeService {
Dictionary dictionary = dictionaryService.getDeepCopyDictionary(analyzeRequest.getDossierTemplateId(), analyzeRequest.getDossierId());
log.info("Updated Dictionaries for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
List<ManualEntity> notFoundManualRedactionEntries = manualRedactionEntryService.addManualRedactionEntriesAndReturnNotFoundEntries(analyzeRequest,
document,
analyzeRequest.getDossierTemplateId());
var notFoundManualRedactionEntries = manualRedactionEntryService.addManualRedactionEntriesAndReturnNotFoundEntries(analyzeRequest,
document,
analyzeRequest.getDossierTemplateId());
var notFoundImportedEntries = importedRedactionEntryService.addImportedEntriesAndReturnNotFoundEntries(analyzeRequest, importedRedactions, document);
var notFoundManualOrImportedEntries = Stream.of(notFoundManualRedactionEntries, notFoundImportedEntries)
.flatMap(Collection::stream)
.collect(Collectors.toList());
dictionarySearchService.addDictionaryEntities(dictionary, document);
log.info("Finished Dictionary Search for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
// we could add the imported redactions similar to the manual redactions here as well for additional processing
List<FileAttribute> allFileAttributes = entityDroolsExecutionService.executeRules(kieWrapperEntityRules.container(),
document,
dictionary,
analyzeRequest.getFileAttributes(),
analyzeRequest.getManualRedactions(),
nerEntities);
document,
dictionary,
analyzeRequest.getFileAttributes(),
analyzeRequest.getManualRedactions(),
nerEntities);
log.info("Finished entity rule execution for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
RedactionLog redactionLog = createRedactionLog(analyzeRequest, document, notFoundManualRedactionEntries, dictionary, kieWrapperEntityRules);
EntityLog entityLog = entityLogCreatorService.createInitialEntityLog(analyzeRequest,
document,
notFoundManualRedactionEntries,
dictionary.getVersion(),
kieWrapperEntityRules.rulesVersion());
document,
notFoundManualOrImportedEntries,
dictionary.getVersion(),
kieWrapperEntityRules.rulesVersion());
return finalizeAnalysis(analyzeRequest, startTime, kieWrapperComponentRules, new EntityLogChanges(entityLog, false), document,
redactionLog,
document.getNumberOfPages(),
dictionary.getVersion(),
false,
new HashSet<>(allFileAttributes));
notFoundImportedEntitiesService.processEntityLog(entityLog, analyzeRequest, notFoundImportedEntries);
return finalizeAnalysis(analyzeRequest,
startTime,
kieWrapperComponentRules,
new EntityLogChanges(entityLog, false),
document,
document.getNumberOfPages(),
dictionary.getVersion(),
false,
new HashSet<>(allFileAttributes));
}
@Deprecated(forRemoval = true)
private RedactionLog updatePreviousRedactionLog(AnalyzeRequest analyzeRequest,
Document document,
List<ManualEntity> notFoundManualRedactionEntries,
RedactionLog previousRedactionLog,
Set<Integer> sectionsToReanalyseIds) {
List<RedactionLogEntry> newRedactionLogEntries = redactionLogCreatorService.createRedactionLog(document,
analyzeRequest.getDossierTemplateId(),
notFoundManualRedactionEntries,
getComments(analyzeRequest));
var importedRedactionFilteredEntries = importedRedactionService.processImportedRedactions(analyzeRequest.getDossierTemplateId(),
analyzeRequest.getDossierId(),
analyzeRequest.getFileId(),
newRedactionLogEntries,
false);
previousRedactionLog.getRedactionLogEntry()
.removeIf(entry -> sectionsToReanalyseIds.contains(entry.getSectionNumber()) && !entry.getType().equals(ImportedRedactionService.IMPORTED_REDACTION_TYPE));
previousRedactionLog.getRedactionLogEntry().addAll(importedRedactionFilteredEntries);
return previousRedactionLog;
}
private AnalyzeResult finalizeAnalysis(AnalyzeRequest analyzeRequest, long startTime, KieWrapper kieWrapperComponentRules, EntityLogChanges entityLogChanges, Document document,
RedactionLog redactionLog,
private AnalyzeResult finalizeAnalysis(AnalyzeRequest analyzeRequest,
long startTime,
KieWrapper kieWrapperComponentRules,
EntityLogChanges entityLogChanges,
Document document,
int numberOfPages,
DictionaryVersion dictionaryVersion,
boolean isReanalysis,
Set<FileAttribute> addedFileAttributes) {
finalizeRedactionLog(analyzeRequest, redactionLog, dictionaryVersion);
EntityLog entityLog = entityLogChanges.getEntityLog();
redactionStorageService.storeObject(analyzeRequest.getDossierId(), analyzeRequest.getFileId(), FileType.ENTITY_LOG, entityLogChanges.getEntityLog());
@@ -285,7 +288,9 @@ public class AnalyzeService {
}
private void computeComponentsWhenRulesArePresent(AnalyzeRequest analyzeRequest, KieWrapper kieWrapperComponentRules, Document document,
private void computeComponentsWhenRulesArePresent(AnalyzeRequest analyzeRequest,
KieWrapper kieWrapperComponentRules,
Document document,
Set<FileAttribute> addedFileAttributes,
EntityLogChanges entityLogChanges,
DictionaryVersion dictionaryVersion) {
@@ -294,8 +299,11 @@ public class AnalyzeService {
return;
}
List<Component> components = componentDroolsExecutionService.executeRules(kieWrapperComponentRules.container(), entityLogChanges.getEntityLog(), document,
addedFileAttributes.stream().toList());
List<Component> components = componentDroolsExecutionService.executeRules(kieWrapperComponentRules.container(),
entityLogChanges.getEntityLog(),
document,
addedFileAttributes.stream()
.toList());
log.info("Finished component rule execution for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
ComponentLog componentLog = componentLogCreatorService.buildComponentLog(analyzeRequest.getAnalysisNumber(), components, kieWrapperComponentRules.rulesVersion());
@@ -305,34 +313,22 @@ public class AnalyzeService {
}
private RedactionLogChanges finalizeRedactionLog(AnalyzeRequest analyzeRequest, RedactionLog redactionLog, DictionaryVersion dictionaryVersion) {
// TODO: remove redactionLog related stuff
RedactionLog previousRedactionLog = redactionStorageService.getRedactionLog(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
redactionLog.setDictionaryVersion(dictionaryVersion.getDossierTemplateVersion());
redactionLog.setDossierDictionaryVersion(dictionaryVersion.getDossierVersion());
excludeExcludedPages(redactionLog, analyzeRequest.getExcludedPages());
RedactionLogChanges redactionLogChange = redactionChangeLogService.computeChanges(previousRedactionLog, redactionLog, analyzeRequest.getAnalysisNumber());
redactionStorageService.storeObject(analyzeRequest.getDossierId(), analyzeRequest.getFileId(), FileType.REDACTION_LOG, redactionLogChange.getRedactionLog());
return redactionLogChange;
}
private static List<SemanticNode> getSectionsToReAnalyse(Document document, Set<Integer> sectionsToReanalyseIds) {
return document.streamChildren().filter(section -> sectionsToReanalyseIds.contains(section.getTreeId().get(0))).collect(Collectors.toList());
return document.streamChildren()
.filter(section -> sectionsToReanalyseIds.contains(section.getTreeId()
.get(0)))
.collect(Collectors.toList());
}
private Set<Integer> getSectionsToReanalyseIds(AnalyzeRequest analyzeRequest, EntityLog entityLog, Document document, DictionaryIncrement dictionaryIncrement) {
private Set<Integer> getSectionsToReanalyseIds(AnalyzeRequest analyzeRequest,
EntityLog entityLog,
Document document,
DictionaryIncrement dictionaryIncrement,
ImportedRedactions importedRedactions) {
return analyzeRequest.getSectionsToReanalyse().isEmpty() //
? sectionFinderService.findSectionsToReanalyse(dictionaryIncrement, entityLog, document, analyzeRequest) //
: analyzeRequest.getSectionsToReanalyse();
return sectionFinderService.findSectionsToReanalyse(dictionaryIncrement, entityLog, document, analyzeRequest, importedRedactions);
}
@@ -352,9 +348,10 @@ public class AnalyzeService {
private static NerEntitiesModel filterNerEntitiesModelBySectionIds(Set<Integer> sectionsToReanalyseIds, NerEntitiesModel nerEntitiesModel) {
return new NerEntitiesModel(nerEntitiesModel.getData().entrySet().stream() //
.filter(entry -> sectionsToReanalyseIds.contains(entry.getKey())) //
.collect(Collectors.toMap(Map.Entry::getKey, Map.Entry::getValue)));
return new NerEntitiesModel(nerEntitiesModel.getData().entrySet()
.stream() //
.filter(entry -> sectionsToReanalyseIds.contains(entry.getKey())) //
.collect(Collectors.toMap(Map.Entry::getKey, Map.Entry::getValue)));
}
@@ -369,66 +366,4 @@ public class AnalyzeService {
return nerEntities;
}
@Deprecated(forRemoval = true)
private RedactionLog createRedactionLog(AnalyzeRequest analyzeRequest,
Document document,
List<ManualEntity> notFoundManualRedactionEntries,
Dictionary dictionary,
KieWrapper wrapper) {
List<RedactionLogEntry> redactionLogEntries = redactionLogCreatorService.createRedactionLog(document,
analyzeRequest.getDossierTemplateId(),
notFoundManualRedactionEntries,
getComments(analyzeRequest));
List<LegalBasis> legalBasis = legalBasisClient.getLegalBasisMapping(analyzeRequest.getDossierTemplateId());
RedactionLog redactionLog = new RedactionLog(redactionServiceSettings.getAnalysisVersion(),
analyzeRequest.getAnalysisNumber(),
redactionLogEntries,
toRedactionLogLegalBasis(legalBasis),
dictionary.getVersion().getDossierTemplateVersion(),
dictionary.getVersion().getDossierVersion(),
wrapper.rulesVersion(),
legalBasisClient.getVersion(analyzeRequest.getDossierTemplateId()));
List<RedactionLogEntry> importedRedactionFilteredEntries = importedRedactionService.processImportedRedactions(analyzeRequest.getDossierTemplateId(),
analyzeRequest.getDossierId(),
analyzeRequest.getFileId(),
redactionLog.getRedactionLogEntry(),
true);
redactionLog.setRedactionLogEntry(importedRedactionFilteredEntries);
return redactionLog;
}
private static Map<String, List<Comment>> getComments(AnalyzeRequest analyzeRequest) {
if (analyzeRequest.getManualRedactions() == null) {
return Collections.emptyMap();
}
if (analyzeRequest.getManualRedactions().getComments() == null) {
return Collections.emptyMap();
}
return analyzeRequest.getManualRedactions().getComments();
}
public List<RedactionLogLegalBasis> toRedactionLogLegalBasis(List<LegalBasis> legalBasis) {
return legalBasis.stream().map(l -> new RedactionLogLegalBasis(l.getName(), l.getDescription(), l.getReason())).collect(Collectors.toList());
}
private void excludeExcludedPages(RedactionLog redactionLog, Set<Integer> excludedPages) {
if (excludedPages != null && !excludedPages.isEmpty()) {
redactionLog.getRedactionLogEntry().forEach(entry -> entry.getPositions().forEach(pos -> {
if (excludedPages.contains(pos.getPage())) {
entry.setExcluded(true);
}
}));
}
}
}
@@ -1,5 +1,8 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.util.List;
import java.util.Set;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine;
@@ -10,6 +13,7 @@ import com.iqser.red.service.redaction.v1.server.model.dictionary.Dictionary;
import com.iqser.red.service.redaction.v1.server.service.document.EntityCreationService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityEnrichmentService;
import io.micrometer.observation.annotation.Observed;
import lombok.AccessLevel;
import lombok.RequiredArgsConstructor;
import lombok.experimental.FieldDefaults;
@@ -24,6 +28,14 @@ public class DictionarySearchService {
EntityEnrichmentService entityEnrichmentService;
@Observed(name = "DictionarySearchService", contextualName = "add-dictionary-entries")
public void addDictionaryEntities(Dictionary dictionary, List<SemanticNode> semanticNodes) {
semanticNodes.forEach(node -> addDictionaryEntities(dictionary, node));
}
@Observed(name = "DictionarySearchService", contextualName = "add-dictionary-entries")
public void addDictionaryEntities(Dictionary dictionary, SemanticNode node) {
for (var model : dictionary.getDictionaryModels()) {
@@ -42,11 +54,12 @@ public class DictionarySearchService {
EntityCreationService entityCreationService = new EntityCreationService(entityEnrichmentService);
searchImplementation.getBoundaries(node.getTextBlock(), node.getTextRange())
.stream().filter(boundary -> entityCreationService.isValidEntityTextRange(node.getTextBlock(), boundary))
.map(bounds -> entityCreationService.forceByTextRange(bounds, type, entityType, node))
.peek(entity -> entity.setDictionaryEntry(true))
.peek(entity -> entity.setDossierDictionaryEntry(isDossierDictionaryEntry))
.forEach(entity -> entity.addEngine(Engine.DICTIONARY));
.stream()
.filter(boundary -> entityCreationService.isValidEntityTextRange(node.getTextBlock(), boundary))
.forEach(bounds -> entityCreationService.byTextRangeWithEngine(bounds, type, entityType, node, Set.of(Engine.DICTIONARY)).ifPresent(entity -> {
entity.setDictionaryEntry(true);
entity.setDossierDictionaryEntry(isDossierDictionaryEntry);
}));
}
}
@@ -23,20 +23,21 @@ import com.iqser.red.service.dictionarymerge.commons.DictionaryEntry;
import com.iqser.red.service.dictionarymerge.commons.DictionaryEntryModel;
import com.iqser.red.service.dictionarymerge.commons.DictionaryMergeService;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.configuration.Colors;
import com.iqser.red.service.redaction.v1.server.RedactionServiceSettings;
import com.iqser.red.service.redaction.v1.server.client.DictionaryClient;
import com.iqser.red.service.redaction.v1.server.model.dictionary.Dictionary;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryIncrement;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryModel;
import com.iqser.red.service.redaction.v1.server.model.dictionary.TenantDictionary;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryEntries;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryIncrement;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryIncrementValue;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryModel;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryRepresentation;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryVersion;
import com.iqser.red.service.redaction.v1.server.RedactionServiceSettings;
import com.iqser.red.service.redaction.v1.server.model.dictionary.TenantDictionary;
import com.knecon.fforesight.tenantcommons.TenantContext;
import feign.FeignException;
import io.micrometer.core.annotation.Timed;
import io.micrometer.observation.annotation.Observed;
import jakarta.annotation.PostConstruct;
import lombok.RequiredArgsConstructor;
import lombok.SneakyThrows;
@@ -47,7 +48,7 @@ import lombok.extern.slf4j.Slf4j;
@RequiredArgsConstructor
public class DictionaryService {
private static final String DEFAULT_COLOR = "#cccccc";
public static final String DEFAULT_COLOR = "#cccccc";
private final DictionaryClient dictionaryClient;
private final RedactionServiceSettings settings;
@@ -73,6 +74,7 @@ public class DictionaryService {
@SneakyThrows
@Observed(name = "DictionaryService", contextualName = "update-dictionary")
@Timed("redactmanager_updateDictionary")
public DictionaryVersion updateDictionary(String dossierTemplateId, String dossierId) {
@@ -94,6 +96,7 @@ public class DictionaryService {
@SneakyThrows
@Observed(name = "DictionaryService", contextualName = "update-dictionary-increments")
@Timed("redactmanager_getDictionaryIncrements")
public DictionaryIncrement getDictionaryIncrements(String dossierTemplateId, DictionaryVersion fromVersion, String dossierId) {
@@ -101,6 +104,7 @@ public class DictionaryService {
Set<DictionaryIncrementValue> newValues = new HashSet<>();
List<DictionaryModel> dictionaryModels = getDossierTemplateDictionary(dossierTemplateId).getDictionary();
dictionaryModels.forEach(dictionaryModel -> {
dictionaryModel.getEntries().forEach(dictionaryEntry -> {
if (dictionaryEntry.getVersion() > fromVersion.getDossierTemplateVersion()) {
@@ -150,19 +154,25 @@ public class DictionaryService {
try {
DictionaryRepresentation dictionaryRepresentation = new DictionaryRepresentation();
var typeResponse = dossierId == null ? dictionaryClient.getAllTypesForDossierTemplate(dossierTemplateId, false) : dictionaryClient.getAllTypesForDossier(dossierId,
false);
var typeResponse = dossierId == null ? dictionaryClient.getAllTypesForDossierTemplate(dossierTemplateId, true) : dictionaryClient.getAllTypesForDossier(dossierId,
true);
if (CollectionUtils.isNotEmpty(typeResponse)) {
List<DictionaryModel> dictionary = typeResponse.stream().map(t -> {
Optional<DictionaryModel> oldModel;
Optional<DictionaryModel> optionalOldModel;
if (dossierId == null) {
var representation = getDossierTemplateDictionary(dossierTemplateId);
oldModel = representation != null ? representation.getDictionary().stream().filter(f -> f.getType().equals(t.getType())).findAny() : Optional.empty();
optionalOldModel = representation != null ? representation.getDictionary()
.stream()
.filter(f -> f.getType().equals(t.getType()))
.findAny() : Optional.empty();
} else {
var representation = getDossierDictionary(dossierId);
oldModel = representation != null ? representation.getDictionary().stream().filter(f -> f.getType().equals(t.getType())).findAny() : Optional.empty();
optionalOldModel = representation != null ? representation.getDictionary()
.stream()
.filter(f -> f.getType().equals(t.getType()))
.findAny() : Optional.empty();
}
Set<DictionaryEntryModel> entries = new HashSet<>();
@@ -175,19 +185,38 @@ public class DictionaryService {
var newFalsePositivesValues = newEntries.getFalsePositives().stream().map(DictionaryEntry::getValue).collect(Collectors.toSet());
var newFalseRecommendationsValues = newEntries.getFalseRecommendations().stream().map(DictionaryEntry::getValue).collect(Collectors.toSet());
oldModel.ifPresent(oldDictionaryModel -> {
optionalOldModel.ifPresent(oldDictionaryModel -> {
});
// add old entries from existing DictionaryModel
oldModel.ifPresent(dictionaryModel -> entries.addAll(dictionaryModel.getEntries().stream().filter(f -> !newValues.contains(f.getValue())).toList()));
oldModel.ifPresent(dictionaryModel -> falsePositives.addAll(dictionaryModel.getFalsePositives()
.stream()
.filter(f -> !newFalsePositivesValues.contains(f.getValue()))
.toList()));
oldModel.ifPresent(dictionaryModel -> falseRecommendations.addAll(dictionaryModel.getFalseRecommendations()
.stream()
.filter(f -> !newFalseRecommendationsValues.contains(f.getValue()))
.toList()));
if (optionalOldModel.isPresent()) {
var oldModel = optionalOldModel.get();
if (oldModel.isCaseInsensitive() && !t.isCaseInsensitive()) {
// add old entries from existing DictionaryModel but exclude lower case representation
entries.addAll(oldModel.getEntries().stream().filter(f -> !newValues.stream().map(s -> s.toLowerCase(Locale.ROOT)).toList().contains(f.getValue())).toList());
falsePositives.addAll(oldModel.getFalsePositives()
.stream()
.filter(f -> !newFalsePositivesValues.stream().map(s -> s.toLowerCase(Locale.ROOT)).toList().contains(f.getValue()))
.toList());
falseRecommendations.addAll(oldModel.getFalseRecommendations()
.stream()
.filter(f -> !newFalseRecommendationsValues.stream().map(s -> s.toLowerCase(Locale.ROOT)).toList().contains(f.getValue()))
.toList());
} else if (!oldModel.isCaseInsensitive() && t.isCaseInsensitive()) {
// add old entries from existing DictionaryModel but exclude upper case representation
entries.addAll(oldModel.getEntries().stream().filter(f -> !newValues.contains(f.getValue().toLowerCase(Locale.ROOT))).toList());
falsePositives.addAll(oldModel.getFalsePositives().stream().filter(f -> !newFalsePositivesValues.contains(f.getValue().toLowerCase(Locale.ROOT))).toList());
falseRecommendations.addAll(oldModel.getFalseRecommendations()
.stream()
.filter(f -> !newFalseRecommendationsValues.contains(f.getValue().toLowerCase(Locale.ROOT)))
.toList());
} else {
// add old entries from existing DictionaryModel
entries.addAll(oldModel.getEntries().stream().filter(f -> !newValues.contains(f.getValue())).toList());
falsePositives.addAll(oldModel.getFalsePositives().stream().filter(f -> !newFalsePositivesValues.contains(f.getValue())).toList());
falseRecommendations.addAll(oldModel.getFalseRecommendations().stream().filter(f -> !newFalseRecommendationsValues.contains(f.getValue())).toList());
}
}
// Add Increments
entries.addAll(newEntries.getEntries());
@@ -292,6 +321,7 @@ public class DictionaryService {
@SneakyThrows
@Timed("redactmanager_getDeepCopyDictionary")
@Observed(name = "DictionaryService", contextualName = "deep-copy-dictionary")
public Dictionary getDeepCopyDictionary(String dossierTemplateId, String dossierId) {
List<DictionaryModel> mergedDictionaries;
@@ -1,6 +1,7 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.time.OffsetDateTime;
import java.util.Comparator;
import java.util.List;
import java.util.Optional;
import java.util.Set;
@@ -12,45 +13,92 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryState;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
import io.micrometer.core.annotation.Timed;
import lombok.AccessLevel;
import lombok.RequiredArgsConstructor;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@RequiredArgsConstructor
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
public class EntityChangeLogService {
@Timed("redactmanager_computeChanges")
public boolean computeChanges(List<EntityLogEntry> previousEntityLogEntries, List<EntityLogEntry> newEntityLogEntries, int analysisNumber) {
public boolean computeChanges(List<EntityLogEntry> previousEntityLogEntries, List<EntityLogEntry> newEntityLogEntries, ManualRedactions manualRedactions, int analysisNumber) {
var now = OffsetDateTime.now();
if (previousEntityLogEntries.isEmpty()) {
newEntityLogEntries.forEach(entry -> entry.getChanges().add(new Change(analysisNumber, ChangeType.ADDED, now)));
return true;
}
boolean hasChanges = false;
var now = OffsetDateTime.now();
for (EntityLogEntry entityLogEntry : newEntityLogEntries) {
Optional<EntityLogEntry> optionalPreviousEntity = previousEntityLogEntries.stream().filter(entry -> entry.getId().equals(entityLogEntry.getId())).findAny();
Optional<EntityLogEntry> optionalPreviousEntity = previousEntityLogEntries.stream()
.filter(entry -> entry.getId().equals(entityLogEntry.getId()))
.findAny();
if (optionalPreviousEntity.isEmpty()) {
hasChanges = true;
entityLogEntry.getChanges().add(new Change(analysisNumber, ChangeType.ADDED, now));
continue;
}
var previousEntity = optionalPreviousEntity.get();
EntityLogEntry previousEntity = optionalPreviousEntity.get();
entityLogEntry.getChanges().addAll(previousEntity.getChanges());
if (!previousEntity.getState().equals(entityLogEntry.getState())) {
hasChanges = true;
ChangeType changeType = calculateChangeType(entityLogEntry.getState(), previousEntity.getState());
if (changeType != null) {
entityLogEntry.getChanges().add(new Change(analysisNumber, changeType, now));
}
entityLogEntry.getChanges().add(new Change(analysisNumber, changeType, now));
}
}
Set<String> existingIds = newEntityLogEntries.stream().map(EntityLogEntry::getId).collect(Collectors.toSet());
List<EntityLogEntry> removedEntries = previousEntityLogEntries.stream().filter(entry -> !existingIds.contains(entry.getId())).toList();
addRemovedEntriesAsRemoved(previousEntityLogEntries, newEntityLogEntries, manualRedactions, analysisNumber, now);
return hasChanges;
}
private void addRemovedEntriesAsRemoved(List<EntityLogEntry> previousEntityLogEntries,
List<EntityLogEntry> newEntityLogEntries,
ManualRedactions manualRedactions,
int analysisNumber,
OffsetDateTime now) {
Set<String> existingIds = newEntityLogEntries.stream()
.map(EntityLogEntry::getId)
.collect(Collectors.toSet());
List<EntityLogEntry> removedEntries = previousEntityLogEntries.stream()
.filter(entry -> !existingIds.contains(entry.getId()))
.collect(Collectors.toList());
List<EntityLogEntry> removedDossierRedaction = removedEntries.stream()
.filter(e -> e.getState() == EntryState.REMOVED && e.getType().equals("dossier_redaction"))
.toList();
previousEntityLogEntries.removeAll(removedDossierRedaction);
removedEntries.removeAll(removedDossierRedaction);
removedEntries.forEach(entry -> entry.getChanges().add(new Change(analysisNumber, ChangeType.REMOVED, now)));
removedEntries.forEach(entry -> entry.setState(EntryState.REMOVED));
return hasChanges;
removedEntries.forEach(entry -> addManualChangeForDictionaryRemovals(entry, manualRedactions));
newEntityLogEntries.addAll(removedEntries);
}
private void addManualChangeForDictionaryRemovals(EntityLogEntry entry, ManualRedactions manualRedactions) {
if (manualRedactions == null || manualRedactions.getIdsToRemove().isEmpty()) {
return;
}
manualRedactions.getIdsToRemove()
.stream()
.filter(IdRemoval::isRemoveFromDictionary)//
.filter(removed -> removed.getAnnotationId().equals(entry.getId()))//
.findFirst()//
.ifPresent(idRemove -> entry.getManualChanges().add(ManualChangeFactory.toManualChange(idRemove, false)));
}
@@ -74,5 +122,4 @@ public class EntityChangeLogService {
return (state.equals(EntryState.REMOVED) || state.equals(EntryState.IGNORED));
}
}
@@ -1,6 +1,5 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.time.OffsetDateTime;
import java.util.ArrayList;
import java.util.Collections;
import java.util.HashSet;
@@ -12,8 +11,7 @@ import java.util.stream.Collectors;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogChanges;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
@@ -24,30 +22,34 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.legalbasis.LegalBasis;
import com.iqser.red.service.redaction.v1.server.RedactionServiceSettings;
import com.iqser.red.service.redaction.v1.server.client.LegalBasisClient;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryVersion;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.IEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.ManualChangeOverwrite;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Image;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.ImageType;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import lombok.AccessLevel;
import lombok.RequiredArgsConstructor;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@Service
@Slf4j
@RequiredArgsConstructor
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
public class EntityLogCreatorService {
private final DictionaryService dictionaryService;
private final ManualChangeFactory manualChangeFactory;
private final ImportedRedactionService importedRedactionService;
private final RedactionServiceSettings redactionServiceSettings;
private final LegalBasisClient legalBasisClient;
private final EntityChangeLogService entityChangeLogService;
DictionaryService dictionaryService;
RedactionServiceSettings redactionServiceSettings;
LegalBasisClient legalBasisClient;
EntityChangeLogService entityChangeLogService;
RedactionStorageService redactionStorageService;
private static boolean notFalsePositiveOrFalseRecommendation(TextEntity textEntity) {
@@ -58,44 +60,47 @@ public class EntityLogCreatorService {
public EntityLog createInitialEntityLog(AnalyzeRequest analyzeRequest,
Document document,
List<ManualEntity> notFoundManualRedactionEntries,
List<PrecursorEntity> notFoundEntities,
DictionaryVersion dictionaryVersion,
long rulesVersion) {
List<EntityLogEntry> entityLogEntries = createEntityLogEntries(document, analyzeRequest.getDossierTemplateId(), notFoundManualRedactionEntries);
List<EntityLogEntry> entityLogEntries = createEntityLogEntries(document, analyzeRequest, notFoundEntities);
List<LegalBasis> legalBasis = legalBasisClient.getLegalBasisMapping(analyzeRequest.getDossierTemplateId());
EntityLog entityLog = new EntityLog(redactionServiceSettings.getAnalysisVersion(),
analyzeRequest.getAnalysisNumber(),
entityLogEntries,
toEntityLogLegalBasis(legalBasis),
dictionaryVersion.getDossierTemplateVersion(),
dictionaryVersion.getDossierVersion(),
rulesVersion,
legalBasisClient.getVersion(analyzeRequest.getDossierTemplateId()));
List<EntityLogEntry> previousExistingEntityLogEntries = getPreviousEntityLogEntries(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
List<EntityLogEntry> importedRedactionFilteredEntries = importedRedactionService.processImportedEntities(analyzeRequest.getDossierTemplateId(),
analyzeRequest.getDossierId(),
analyzeRequest.getFileId(),
entityLog.getEntityLogEntry(),
true);
entityChangeLogService.computeChanges(previousExistingEntityLogEntries, entityLogEntries, analyzeRequest.getManualRedactions(), analyzeRequest.getAnalysisNumber());
entityLog.setEntityLogEntry(importedRedactionFilteredEntries);
var now = OffsetDateTime.now();
entityLogEntries.forEach(entry -> entry.getChanges().add(new Change(analyzeRequest.getAnalysisNumber(), ChangeType.ADDED, now)));
excludeExcludedPages(entityLog, analyzeRequest.getExcludedPages());
return entityLog;
return new EntityLog(redactionServiceSettings.getAnalysisVersion(),
analyzeRequest.getAnalysisNumber(),
entityLogEntries,
toEntityLogLegalBasis(legalBasis),
dictionaryVersion.getDossierTemplateVersion(),
dictionaryVersion.getDossierVersion(),
rulesVersion,
legalBasisClient.getVersion(analyzeRequest.getDossierTemplateId()));
}
public EntityLogChanges updateVersionsAndReturnChanges(EntityLog entityLog, DictionaryVersion dictionaryVersion, String dossierTemplateId, boolean hasChanges) {
private List<EntityLogEntry> getPreviousEntityLogEntries(String dossierId, String fileId) {
List<LegalBasis> legalBasis = legalBasisClient.getLegalBasisMapping(dossierTemplateId);
entityLog.setLegalBasisVersion(legalBasisClient.getVersion(dossierTemplateId));
if (redactionStorageService.entityLogExists(dossierId, fileId)) {
return redactionStorageService.getEntityLog(dossierId, fileId).getEntityLogEntry();
} else {
return Collections.emptyList();
}
}
public EntityLogChanges updateVersionsAndReturnChanges(EntityLog entityLog, DictionaryVersion dictionaryVersion, AnalyzeRequest analyzeRequest, boolean hasChanges) {
List<LegalBasis> legalBasis = legalBasisClient.getLegalBasisMapping(analyzeRequest.getDossierTemplateId());
entityLog.setLegalBasisVersion(legalBasisClient.getVersion(analyzeRequest.getDossierTemplateId()));
entityLog.setLegalBasis(toEntityLogLegalBasis(legalBasis));
entityLog.setDictionaryVersion(dictionaryVersion.getDossierTemplateVersion());
entityLog.setDossierDictionaryVersion(dictionaryVersion.getDossierVersion());
entityLog.setAnalysisNumber(analyzeRequest.getAnalysisNumber());
return new EntityLogChanges(entityLog, hasChanges);
}
@@ -103,87 +108,89 @@ public class EntityLogCreatorService {
public EntityLogChanges updatePreviousEntityLog(AnalyzeRequest analyzeRequest,
Document document,
List<ManualEntity> notFoundManualRedactionEntries,
List<PrecursorEntity> notFoundEntries,
EntityLog previousEntityLog,
Set<Integer> sectionsToReanalyseIds,
DictionaryVersion dictionaryVersion) {
List<EntityLogEntry> newEntityLogEntries = createEntityLogEntries(document, analyzeRequest.getDossierTemplateId(), notFoundManualRedactionEntries);
Set<String> newEntityIds = newEntityLogEntries.stream().map(EntityLogEntry::getId).collect(Collectors.toSet());
List<EntityLogEntry> newEntityLogEntries = createEntityLogEntries(document, analyzeRequest, notFoundEntries).stream()
.filter(entry -> entry.getContainingNodeId().isEmpty() || sectionsToReanalyseIds.contains(entry.getContainingNodeId()
.get(0)))
.collect(Collectors.toList());
Set<String> newEntityIds = newEntityLogEntries.stream()
.map(EntityLogEntry::getId)
.collect(Collectors.toSet());
List<EntityLogEntry> previousEntriesFromReAnalyzedSections = previousEntityLog.getEntityLogEntry()
.stream()
.filter(entry -> (newEntityIds.contains(entry.getId()) || sectionsToReanalyseIds.contains(entry.getContainingNodeId().get(0))) && !entry.getType()
.equals(ImportedRedactionService.IMPORTED_REDACTION_TYPE))
.toList();
.filter(entry -> (newEntityIds.contains(entry.getId()) || entry.getContainingNodeId().isEmpty() || sectionsToReanalyseIds.contains(entry.getContainingNodeId()
.get(0))))
.collect(Collectors.toList());
previousEntityLog.getEntityLogEntry().removeAll(previousEntriesFromReAnalyzedSections);
boolean hasChanges = entityChangeLogService.computeChanges(previousEntriesFromReAnalyzedSections, newEntityLogEntries, analyzeRequest.getAnalysisNumber());
boolean hasChanges = entityChangeLogService.computeChanges(previousEntriesFromReAnalyzedSections,
newEntityLogEntries,
analyzeRequest.getManualRedactions(),
analyzeRequest.getAnalysisNumber());
previousEntityLog.getEntityLogEntry().addAll(newEntityLogEntries);
var newEntityLogWithImportedEntities = importedRedactionService.processImportedEntities(analyzeRequest.getDossierTemplateId(),
analyzeRequest.getDossierId(),
analyzeRequest.getFileId(),
newEntityLogEntries,
false);
previousEntityLog.getEntityLogEntry().addAll(newEntityLogWithImportedEntities);
excludeExcludedPages(previousEntityLog, analyzeRequest.getExcludedPages());
return updateVersionsAndReturnChanges(previousEntityLog, dictionaryVersion, analyzeRequest.getDossierTemplateId(), hasChanges);
return updateVersionsAndReturnChanges(previousEntityLog, dictionaryVersion, analyzeRequest, hasChanges);
}
private List<EntityLogEntry> createEntityLogEntries(Document document, String dossierTemplateId, List<ManualEntity> notFoundManualRedactionEntries) {
private List<EntityLogEntry> createEntityLogEntries(Document document, AnalyzeRequest analyzeRequest, List<PrecursorEntity> notFoundPrecursorEntries) {
String dossierTemplateId = analyzeRequest.getDossierTemplateId();
List<EntityLogEntry> entries = new ArrayList<>();
Set<String> processedIds = new HashSet<>();
document.getEntities()
.stream()
.filter(entity -> !entity.getValue().isEmpty())
.filter(EntityLogCreatorService::notFalsePositiveOrFalseRecommendation)
.filter(entity -> !entity.removed())
.forEach(entityNode -> entries.addAll(toEntityLogEntries(entityNode, dossierTemplateId, processedIds)));
document.streamAllImages().filter(entity -> !entity.removed()).forEach(imageNode -> entries.add(createEntityLogEntry(imageNode, dossierTemplateId)));
notFoundManualRedactionEntries.stream().filter(entity -> !entity.removed()).forEach(manualEntity -> entries.add(createEntityLogEntry(manualEntity, dossierTemplateId)));
.forEach(entityNode -> entries.addAll(toEntityLogEntries(entityNode)));
document.streamAllImages()
.filter(entity -> !entity.removed())
.forEach(imageNode -> entries.add(createEntityLogEntry(imageNode, dossierTemplateId)));
notFoundPrecursorEntries.stream()
.filter(entity -> !entity.removed())
.forEach(precursorEntity -> entries.add(createEntityLogEntry(precursorEntity, dossierTemplateId)));
return entries;
}
private List<EntityLogEntry> toEntityLogEntries(TextEntity textEntity, String dossierTemplateId, Set<String> processedIds) {
private List<EntityLogEntry> toEntityLogEntries(TextEntity textEntity) {
List<EntityLogEntry> redactionLogEntities = new ArrayList<>();
List<EntityLogEntry> entityLogEntries = new ArrayList<>();
// split entity into multiple entries if it occurs on multiple pages, since FE can't handle multi page entities
for (PositionOnPage positionOnPage : textEntity.getPositionsOnPagePerPage()) {
// Duplicates should be removed. They might exist due to table extraction duplicating cells spanning multiple columns/rows.
if (processedIds.contains(positionOnPage.getId())) {
continue;
}
processedIds.add(positionOnPage.getId());
EntityLogEntry entityLogEntry = createEntityLogEntry(textEntity);
EntityLogEntry redactionLogEntry = createEntityLogEntry(textEntity, dossierTemplateId);
redactionLogEntry.setId(positionOnPage.getId());
List<Position> rectanglesPerLine = positionOnPage.getRectanglePerLine().stream().map(rectangle2D -> new Position(rectangle2D, positionOnPage.getPage().getNumber()))
List<Position> rectanglesPerLine = positionOnPage.getRectanglePerLine()
.stream()
.map(rectangle2D -> new Position(rectangle2D, positionOnPage.getPage().getNumber()))
.toList();
redactionLogEntry.setPositions(rectanglesPerLine);
redactionLogEntities.add(redactionLogEntry);
// set the ID from the positions, since it might contain a "-" with the page number if the entity is split across multiple pages
entityLogEntry.setId(positionOnPage.getId());
entityLogEntry.setPositions(rectanglesPerLine);
entityLogEntries.add(entityLogEntry);
}
return redactionLogEntities;
return entityLogEntries;
}
public EntityLogEntry createEntityLogEntry(Image image, String dossierTemplateId) {
private EntityLogEntry createEntityLogEntry(Image image, String dossierTemplateId) {
String imageType = image.getImageType().equals(ImageType.OTHER) ? "image" : image.getImageType().toString().toLowerCase(Locale.ENGLISH);
boolean isHint = dictionaryService.isHint(imageType, dossierTemplateId);
boolean isHint = dictionaryService.isHint(image.type(), dossierTemplateId);
return EntityLogEntry.builder()
.id(image.getId())
.value(image.value())
.color(getColor(imageType, dossierTemplateId, image.applied(), isHint))
.value(image.value())
.type(imageType)
.type(image.type())
.reason(image.buildReasonWithManualChangeDescriptions())
.legalBasis(image.legalBasis())
.matchedRule(image.getMatchedRule().getRuleIdentifier().toString())
@@ -191,54 +198,74 @@ public class EntityLogCreatorService {
.positions(List.of(new Position(image.getPosition(), image.getPage().getNumber())))
.containingNodeId(image.getTreeId())
.closestHeadline(image.getHeadline().getTextBlock().getSearchText())
.section(image.getManualOverwrite().getSection().orElse(image.getParent().toString()))
.section(image.getManualOverwrite().getSection()
.orElse(image.getParent().toString()))
.imageHasTransparency(image.isTransparent())
.manualChanges(manualChangeFactory.toManualChangeList(image.getManualOverwrite().getManualChangeLog(), isHint))
.manualChanges(ManualChangeFactory.toManualChangeList(image.getManualOverwrite().getManualChangeLog(), isHint))
.state(buildEntryState(image))
.entryType(buildEntryType(image))
.entryType(isHint ? EntryType.IMAGE_HINT : EntryType.IMAGE)
.engines(getEngines(null, image.getManualOverwrite()))
.build();
}
private EntityLogEntry createEntityLogEntry(ManualEntity manualEntity, String dossierTemplateId) {
private EntityLogEntry createEntityLogEntry(PrecursorEntity precursorEntity, String dossierTemplateId) {
String type = manualEntity.getManualOverwrite().getType().orElse(manualEntity.getType());
boolean isHint = isHint(manualEntity.getEntityType());
return EntityLogEntry.builder().id(manualEntity.getId()).color(getColor(type, dossierTemplateId, manualEntity.applied(), isHint))
.reason(manualEntity.buildReasonWithManualChangeDescriptions())
.legalBasis(manualEntity.legalBasis())
.value(manualEntity.value()).type(type).state(buildEntryState(manualEntity)).entryType(buildEntryType(manualEntity))
.section(manualEntity.getManualOverwrite().getSection().orElse(manualEntity.getSection()))
String type = precursorEntity.getManualOverwrite().getType()
.orElse(precursorEntity.getType());
boolean isHint = isHint(precursorEntity.getEntityType());
return EntityLogEntry.builder()
.id(precursorEntity.getId())
.reason(precursorEntity.buildReasonWithManualChangeDescriptions())
.legalBasis(precursorEntity.legalBasis())
.value(precursorEntity.value())
.type(type)
.state(buildEntryState(precursorEntity))
.entryType(buildEntryType(precursorEntity))
.section(precursorEntity.getManualOverwrite().getSection()
.orElse(precursorEntity.getSection()))
.containingNodeId(Collections.emptyList())
.closestHeadline("")
.matchedRule(manualEntity.getMatchedRule().getRuleIdentifier().toString())
.dictionaryEntry(manualEntity.isDictionaryEntry())
.dossierDictionaryEntry(manualEntity.isDossierDictionaryEntry())
.matchedRule(precursorEntity.getMatchedRule().getRuleIdentifier().toString())
.dictionaryEntry(precursorEntity.isDictionaryEntry())
.dossierDictionaryEntry(precursorEntity.isDossierDictionaryEntry())
.textAfter("")
.textBefore("")
.startOffset(-1)
.endOffset(-1)
.positions(manualEntity.getEntityPosition().stream().map(entityPosition -> new Position(entityPosition.rectangle2D(), entityPosition.pageNumber())).toList())
.engines(Collections.emptySet())
.positions(precursorEntity.getManualOverwrite().getPositions()
.orElse(precursorEntity.getEntityPosition())
.stream()
.map(entityPosition -> new Position(entityPosition.rectangle2D(), entityPosition.pageNumber()))
.toList())
.engines(getEngines(precursorEntity.getEngines(), precursorEntity.getManualOverwrite()))
//imported is no longer used, frontend should check engines
//(was .imported(precursorEntity.getEngines() != null && precursorEntity.getEngines().contains(Engine.IMPORTED)))
.imported(false)
.reference(Collections.emptySet())
.manualChanges(manualChangeFactory.toManualChangeList(manualEntity.getManualOverwrite().getManualChangeLog(), isHint))
.manualChanges(ManualChangeFactory.toManualChangeList(precursorEntity.getManualOverwrite().getManualChangeLog(), isHint))
.build();
}
private EntityLogEntry createEntityLogEntry(TextEntity entity, String dossierTemplateId) {
private EntityLogEntry createEntityLogEntry(TextEntity entity) {
Set<String> referenceIds = new HashSet<>();
entity.references().stream().filter(TextEntity::active).forEach(ref -> ref.getPositionsOnPagePerPage().forEach(pos -> referenceIds.add(pos.getId())));
entity.references()
.stream()
.filter(TextEntity::active)
.forEach(ref -> ref.getPositionsOnPagePerPage()
.forEach(pos -> referenceIds.add(pos.getId())));
boolean isHint = isHint(entity.getEntityType());
return EntityLogEntry.builder()
.color(getColor(entity.getType(), dossierTemplateId, entity.applied(), isHint))
.reason(entity.buildReasonWithManualChangeDescriptions())
.legalBasis(entity.legalBasis())
.value(entity.getManualOverwrite().getValue().orElse(entity.getMatchedRule().isWriteValueWithLineBreaks() ? entity.getValueWithLineBreaks() : entity.getValue()))
.type(entity.getType())
.section(entity.getManualOverwrite().getSection().orElse(entity.getDeepestFullyContainingNode().toString()))
.value(entity.getManualOverwrite().getValue()
.orElse(entity.getMatchedRule().isWriteValueWithLineBreaks() ? entity.getValueWithLineBreaks() : entity.getValue()))
.type(entity.type())
.section(entity.getManualOverwrite().getSection()
.orElse(entity.getDeepestFullyContainingNode().toString()))
.containingNodeId(entity.getDeepestFullyContainingNode().getTreeId())
.closestHeadline(entity.getDeepestFullyContainingNode().getHeadline().getTextBlock().getSearchText())
.matchedRule(entity.getMatchedRule().getRuleIdentifier().toString())
@@ -248,31 +275,36 @@ public class EntityLogCreatorService {
.startOffset(entity.getTextRange().start())
.endOffset(entity.getTextRange().end())
.dossierDictionaryEntry(entity.isDossierDictionaryEntry())
.engines(entity.getEngines() != null ? entity.getEngines() : Collections.emptySet())
.engines(getEngines(entity.getEngines(), entity.getManualOverwrite()))
//imported is no longer used, frontend should check engines
//(was .imported(entity.getEngines() != null && entity.getEngines().contains(Engine.IMPORTED)))
.imported(false)
.reference(referenceIds)
.manualChanges(manualChangeFactory.toManualChangeList(entity.getManualOverwrite().getManualChangeLog(), isHint))
.manualChanges(ManualChangeFactory.toManualChangeList(entity.getManualOverwrite().getManualChangeLog(), isHint))
.state(buildEntryState(entity))
.entryType(buildEntryType(entity))
.build();
}
private Set<Engine> getEngines(Set<Engine> currentEngines, ManualChangeOverwrite manualChangeOverwrite) {
Set<Engine> engines = currentEngines != null ? new HashSet<>(currentEngines) : new HashSet<>();
if (manualChangeOverwrite != null && !manualChangeOverwrite.getManualChangeLog().isEmpty()) {
engines.add(Engine.MANUAL);
}
return engines;
}
private boolean isHint(EntityType entityType) {
return entityType.equals(EntityType.HINT);
}
private float[] getColor(String type, String dossierTemplateId, boolean isApplied, boolean isHint) {
if (!isApplied && !isHint) {
return dictionaryService.getNotRedactedColor(dossierTemplateId);
}
return dictionaryService.getColor(type, dossierTemplateId);
}
private EntryState buildEntryState(IEntity entity) {
public static EntryState buildEntryState(IEntity entity) {
if (entity.applied() && entity.active()) {
return EntryState.APPLIED;
@@ -286,15 +318,15 @@ public class EntityLogCreatorService {
}
private EntryType buildEntryType(IEntity entity) {
public static EntryType buildEntryType(IEntity entity) {
if (entity instanceof TextEntity textEntity) {
return getEntryType(textEntity.getEntityType());
} else if (entity instanceof ManualEntity manualEntity) {
if (((ManualEntity) entity).isRectangle()) {
} else if (entity instanceof PrecursorEntity precursorEntity) {
if (precursorEntity.isRectangle()) {
return EntryType.AREA;
}
return getEntryType(manualEntity.getEntityType());
return getEntryType(precursorEntity.getEntityType());
} else if (entity instanceof Image) {
return EntryType.IMAGE;
}
@@ -316,20 +348,9 @@ public class EntityLogCreatorService {
private List<EntityLogLegalBasis> toEntityLogLegalBasis(List<LegalBasis> legalBasis) {
return legalBasis.stream().map(l -> new EntityLogLegalBasis(l.getName(), l.getDescription(), l.getReason())).collect(Collectors.toList());
}
private void excludeExcludedPages(EntityLog entityLog, Set<Integer> excludedPages) {
if (excludedPages != null && !excludedPages.isEmpty()) {
entityLog.getEntityLogEntry().forEach(entry -> entry.getPositions().forEach(pos -> {
if (excludedPages.contains(pos.getPageNumber())) {
entry.setExcluded(true);
}
}));
}
return legalBasis.stream()
.map(l -> new EntityLogLegalBasis(l.getName(), l.getDescription(), l.getReason()))
.collect(Collectors.toList());
}
}
@@ -1,263 +0,0 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.util.HashSet;
import java.util.List;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryState;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Point;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.imported.ImportedRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.imported.ImportedRedactions;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import io.micrometer.core.annotation.Timed;
import lombok.RequiredArgsConstructor;
@Service
@RequiredArgsConstructor
public class ImportedRedactionService {
public static final String IMPORTED_REDACTION_TYPE = "imported_redaction";
private final DictionaryService dictionaryService;
private final RedactionStorageService redactionStorageService;
@Deprecated(forRemoval = true)
@Timed("redactmanager_processImportedRedactions")
public List<RedactionLogEntry> processImportedRedactions(String dossierTemplateId,
String dossierId,
String fileId,
List<RedactionLogEntry> redactionLogEntries,
boolean addImportedRedactions) {
var importedRedactions = redactionStorageService.getImportedRedactions(dossierId, fileId);
if (importedRedactions == null) {
return redactionLogEntries;
}
redactionLogEntries.forEach(redactionLogEntry -> addIntersections(redactionLogEntry, importedRedactions));
if (addImportedRedactions) {
return addImportedRedactionsRedactionLogEntries(dossierTemplateId, redactionLogEntries, importedRedactions);
}
return redactionLogEntries;
}
@Timed("redactmanager_processImportedRedactions")
public List<EntityLogEntry> processImportedEntities(String dossierTemplateId,
String dossierId,
String fileId,
List<EntityLogEntry> redactionLogEntries,
boolean addImportedRedactions) {
var importedRedactions = redactionStorageService.getImportedRedactions(dossierId, fileId);
if (importedRedactions == null) {
return redactionLogEntries;
}
redactionLogEntries.forEach(redactionLogEntry -> addIntersections(redactionLogEntry, importedRedactions));
if (addImportedRedactions) {
return addImportedRedactionsEntityLogEntries(dossierTemplateId, redactionLogEntries, importedRedactions);
}
return redactionLogEntries;
}
@Deprecated(forRemoval = true)
private List<RedactionLogEntry> addImportedRedactionsRedactionLogEntries(String dossierTemplateId,
List<RedactionLogEntry> redactionLogEntries,
ImportedRedactions importedRedactions) {
for (var importedRedactionsValues : importedRedactions.getImportedRedactions().values()) {
for (var importedRedaction : importedRedactionsValues) {
RedactionLogEntry redactionLogEntry = RedactionLogEntry.builder()
.id(importedRedaction.getId())
.type(IMPORTED_REDACTION_TYPE)
.imported(true)
.redacted(true)
.positions(importedRedaction.getPositions())
.color(getColor(IMPORTED_REDACTION_TYPE, dossierTemplateId))
.build();
redactionLogEntries.add(redactionLogEntry);
}
}
return redactionLogEntries;
}
private List<EntityLogEntry> addImportedRedactionsEntityLogEntries(String dossierTemplateId, List<EntityLogEntry> entityLogEntries, ImportedRedactions importedRedactions) {
for (var importedRedactionsValues : importedRedactions.getImportedRedactions().values()) {
for (var importedRedaction : importedRedactionsValues) {
EntityLogEntry redactionLogEntry = EntityLogEntry.builder()
.id(importedRedaction.getId())
.type(IMPORTED_REDACTION_TYPE)
.imported(true)
.state(EntryState.APPLIED)
.positions(toPositions(importedRedaction.getPositions()))
.color(getColor(IMPORTED_REDACTION_TYPE, dossierTemplateId))
.build();
entityLogEntries.add(redactionLogEntry);
}
}
return entityLogEntries;
}
private List<Position> toPositions(List<Rectangle> positions) {
return positions.stream().map(this::toPosition).toList();
}
private Position toPosition(Rectangle rectangle) {
return new Position(new float[]{rectangle.getTopLeft().getX(), rectangle.getTopLeft().getY(), rectangle.getWidth(), rectangle.getHeight()}, rectangle.getPage());
}
@Deprecated(forRemoval = true)
private void addIntersections(RedactionLogEntry redactionLogEntry, ImportedRedactions importedRedactions) {
for (Rectangle rectangle : redactionLogEntry.getPositions()) {
var normalizedRectangle = normalize(rectangle);
if (importedRedactions.getImportedRedactions().containsKey(rectangle.getPage())) {
var importedRedactionsOnPage = importedRedactions.getImportedRedactions().get(rectangle.getPage());
for (ImportedRedaction importedRedaction : importedRedactionsOnPage) {
for (Rectangle importedRedactionPosition : importedRedaction.getPositions()) {
if (rectOverlap(normalizedRectangle, normalize(importedRedactionPosition))) {
if (redactionLogEntry.getImportedRedactionIntersections() == null) {
redactionLogEntry.setImportedRedactionIntersections(new HashSet<>());
}
redactionLogEntry.getImportedRedactionIntersections().add(importedRedaction.getId());
}
}
}
}
}
}
private void addIntersections(EntityLogEntry redactionLogEntry, ImportedRedactions importedRedactions) {
for (Position rectangle : redactionLogEntry.getPositions()) {
var normalizedRectangle = normalize(rectangle);
if (importedRedactions.getImportedRedactions().containsKey(rectangle.getPageNumber())) {
var importedRedactionsOnPage = importedRedactions.getImportedRedactions().get(rectangle.getPageNumber());
for (ImportedRedaction importedRedaction : importedRedactionsOnPage) {
for (Rectangle importedRedactionPosition : importedRedaction.getPositions()) {
if (rectOverlap(normalizedRectangle, normalize(importedRedactionPosition))) {
if (redactionLogEntry.getImportedRedactionIntersections() == null) {
redactionLogEntry.setImportedRedactionIntersections(new HashSet<>());
}
redactionLogEntry.getImportedRedactionIntersections().add(importedRedaction.getId());
}
}
}
}
}
}
boolean valueInRange(float value, float min, float max) {
return round(value) >= round(min) && round(value) <= round(max);
}
boolean rectOverlap(Rectangle a, Rectangle b) {
boolean xOverlap = valueInRange(a.getTopLeft().getX(), b.getTopLeft().getX(), b.getTopLeft().getX() + b.getWidth()) || valueInRange(b.getTopLeft().getX(),
a.getTopLeft().getX(),
a.getTopLeft().getX() + a.getWidth());
boolean yOverlap = valueInRange(a.getTopLeft().getY(), b.getTopLeft().getY(), b.getTopLeft().getY() + b.getHeight()) || valueInRange(b.getTopLeft().getY(),
a.getTopLeft().getY(),
a.getTopLeft().getY() + a.getHeight());
return xOverlap && yOverlap;
}
@Deprecated(forRemoval = true)
private Rectangle normalize(Rectangle rectangle) {
Rectangle r = new Rectangle();
Point p = new Point();
if (rectangle.getWidth() < 0) {
p.setX(rectangle.getTopLeft().getX() + rectangle.getWidth());
r.setWidth(Math.abs(rectangle.getWidth()));
} else {
p.setX(rectangle.getTopLeft().getX());
r.setWidth(rectangle.getWidth());
}
if (rectangle.getHeight() < 0) {
p.setY(rectangle.getTopLeft().getY() + rectangle.getHeight());
r.setHeight(Math.abs(rectangle.getHeight()));
} else {
p.setY(rectangle.getTopLeft().getY());
r.setHeight(rectangle.getHeight());
}
r.setTopLeft(p);
r.setPage(rectangle.getPage());
return r;
}
private Rectangle normalize(Position position) {
Rectangle r = new Rectangle();
Point p = new Point();
if (position.getRectangle()[2] < 0) {
p.setX(position.getRectangle()[0] + position.getRectangle()[2]);
r.setWidth(Math.abs(position.getRectangle()[2]));
} else {
p.setX(position.getRectangle()[0]);
r.setWidth(position.getRectangle()[2]);
}
if (position.getRectangle()[3] < 0) {
p.setY(position.getRectangle()[1] + position.getRectangle()[3]);
r.setHeight(Math.abs(position.getRectangle()[3]));
} else {
p.setY(position.getRectangle()[1]);
r.setHeight(position.getRectangle()[3]);
}
r.setTopLeft(p);
r.setPage(position.getPageNumber());
return r;
}
private float round(float value) {
double d = Math.pow(10, 0);
return (float) (Math.round(value * d) / d);
}
private float[] getColor(String type, String dossierTemplateId) {
return dictionaryService.getColor(type, dossierTemplateId);
}
}
@@ -2,9 +2,10 @@ package com.iqser.red.service.redaction.v1.server.service;
import java.time.OffsetDateTime;
import java.util.List;
import java.util.stream.Collectors;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualForceRedaction;
@@ -12,31 +13,34 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualRedactionType;
@Service
import lombok.experimental.UtilityClass;
@UtilityClass
public class ManualChangeFactory {
public List<ManualChange> toManualChangeList(List<BaseAnnotation> manualChanges, boolean isHint) {
return manualChanges.stream().map(baseAnnotation -> toManualChange(baseAnnotation, isHint)).toList();
return manualChanges.stream()
.map(baseAnnotation -> toManualChange(baseAnnotation, isHint))
.collect(Collectors.toList());
}
private ManualChange toManualChange(BaseAnnotation baseAnnotation, boolean isHint) {
public ManualChange toManualChange(BaseAnnotation baseAnnotation, boolean isHint) {
ManualChange manualChange = ManualChange.from(baseAnnotation);
if (baseAnnotation instanceof ManualRecategorization imageRecategorization) {
manualChange.withManualRedactionType(ManualRedactionType.RECATEGORIZE).withChange("type", imageRecategorization.getType());
} else if (baseAnnotation instanceof IdRemoval manualRemoval) {
manualChange.withManualRedactionType(manualRemoval.isRemoveFromDictionary() ? ManualRedactionType.REMOVE_FROM_DICTIONARY : ManualRedactionType.REMOVE_LOCALLY);
} else if (baseAnnotation instanceof ManualForceRedaction) {
manualChange.withManualRedactionType(isHint ? ManualRedactionType.FORCE_HINT : ManualRedactionType.FORCE_REDACT);
manualChange.withManualRedactionType(manualRemoval.isRemoveFromDictionary() ? ManualRedactionType.REMOVE_FROM_DICTIONARY : ManualRedactionType.REMOVE);
} else if (baseAnnotation instanceof ManualForceRedaction manualForceRedaction) {
manualChange.withManualRedactionType(ManualRedactionType.FORCE).withChange("legalBasis", manualForceRedaction.getLegalBasis());
} else if (baseAnnotation instanceof ManualResizeRedaction manualResizeRedact) {
manualChange.withManualRedactionType(ManualRedactionType.RESIZE).withChange("value", manualResizeRedact.getValue());
manualChange.withManualRedactionType(manualResizeRedact.getUpdateDictionary() ? ManualRedactionType.RESIZE_IN_DICTIONARY : ManualRedactionType.RESIZE)
.withChange("value", manualResizeRedact.getValue());
} else if (baseAnnotation instanceof ManualRedactionEntry manualRedactionEntry) {
manualChange.withManualRedactionType(manualRedactionEntry.isAddToDictionary() ? ManualRedactionType.ADD_TO_DICTIONARY : ManualRedactionType.ADD_LOCALLY)
manualChange.withManualRedactionType(manualRedactionEntry.isAddToDictionary() ? ManualRedactionType.ADD_TO_DICTIONARY : ManualRedactionType.ADD)
.withChange("value", manualRedactionEntry.getValue());
} else if (baseAnnotation instanceof ManualLegalBasisChange manualLegalBasisChange) {
manualChange.withManualRedactionType(ManualRedactionType.LEGAL_BASIS_CHANGE)
@@ -1,47 +1,70 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.awt.geom.Rectangle2D;
import java.util.ArrayList;
import java.util.Collection;
import java.util.HashSet;
import java.util.LinkedList;
import java.util.List;
import java.util.Map;
import java.util.NoSuchElementException;
import java.util.Optional;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.stereotype.Service;
import com.google.common.collect.Sets;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRecategorization;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.IEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Image;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.ImageType;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Page;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.service.document.EntityCreationService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityFindingUtility;
import com.iqser.red.service.redaction.v1.server.utils.RectangleTransformations;
import lombok.AccessLevel;
import lombok.RequiredArgsConstructor;
import lombok.experimental.FieldDefaults;
@Service
@RequiredArgsConstructor
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
public class ManualChangesApplicationService {
EntityCreationService entityCreationService;
static double MATCH_THRESHOLD = 10;
public void recategorize(IEntity IEntityToBeReCategorized, ManualRecategorization manualRecategorization) {
EntityFindingUtility entityFindingUtility;
if (IEntityToBeReCategorized instanceof Image image) {
@Deprecated
public void recategorize(IEntity entityToBeReCategorized, ManualRecategorization manualRecategorization) {
entityToBeReCategorized.getMatchedRuleList().clear();
entityToBeReCategorized.getManualOverwrite().addChange(manualRecategorization);
if (entityToBeReCategorized instanceof Image image) {
image.setImageType(ImageType.fromString(manualRecategorization.getType()));
return;
}
// need to create a new entity and copy over all values, since type is part of the primary key for entities and should never be changed!
if (IEntityToBeReCategorized instanceof TextEntity textEntity) {
TextEntity recategorizedEntity = entityCreationService.copyEntityWithoutRules(textEntity, manualRecategorization.getType(), textEntity.getEntityType(), textEntity.getDeepestFullyContainingNode());
recategorizedEntity.setPositionsOnPagePerPage(textEntity.getPositionsOnPagePerPage());
recategorizedEntity.getManualOverwrite().addChange(manualRecategorization);
textEntity.remove("FINAL.0.0", "removed by manual recategorization");
if (entityToBeReCategorized instanceof TextEntity textEntity) {
textEntity.setType(manualRecategorization.getType());
}
}
public void resize(TextEntity entityToBeResized, ManualResizeRedaction manualResizeRedaction) {
resizeEntityAndReinsert(entityToBeResized, manualResizeRedaction);
}
@Deprecated
public void resizeEntityAndReinsert(TextEntity entityToBeResized, ManualResizeRedaction manualResizeRedaction) {
PositionOnPage positionOnPageToBeResized = entityToBeResized.getPositionsOnPagePerPage()
@@ -50,32 +73,60 @@ public class ManualChangesApplicationService {
.findFirst()
.orElseThrow(() -> new NoSuchElementException("No redaction position with matching annotation id found!"));
positionOnPageToBeResized.setRectanglePerLine(manualResizeRedaction.getPositions().stream().map(ManualChangesApplicationService::toRectangle2D).toList());
positionOnPageToBeResized.setRectanglePerLine(manualResizeRedaction.getPositions()
.stream()
.map(ManualChangesApplicationService::toRectangle2D)
.collect(Collectors.toList()));
int newStartOffset;
if (manualResizeRedaction.getValue().length() > entityToBeResized.getValue().length()) {
newStartOffset = entityToBeResized.getTextRange().start() - manualResizeRedaction.getValue().indexOf(entityToBeResized.getValue());
} else {
newStartOffset = entityToBeResized.getTextRange().start() + entityToBeResized.getValue().indexOf(manualResizeRedaction.getValue());
}
// need to reinsert the entity, due to the boundary having changed.
removeAndUpdateAndReInsertEntity(entityToBeResized, manualResizeRedaction, newStartOffset);
entityToBeResized.getManualOverwrite().addChange(manualResizeRedaction);
SemanticNode node = entityToBeResized.getDeepestFullyContainingNode();
PrecursorEntity searchEntity = PrecursorEntity.fromManualResizeRedaction(manualResizeRedaction);
// Loop through nodes starting from the deepest fully containing node all the way to the document node
while (node != null) {
Map<String, List<TextEntity>> possibleEntities = entityFindingUtility.findAllPossibleEntitiesAndGroupByValue(node, List.of(searchEntity));
Optional<TextEntity> closestEntity = entityFindingUtility.findClosestEntityAndReturnEmptyIfNotFound(searchEntity, possibleEntities, MATCH_THRESHOLD);
if (closestEntity.isPresent()) {
copyValuesFromClosestEntity(entityToBeResized, manualResizeRedaction, closestEntity.get());
possibleEntities.values().stream().flatMap(Collection::stream).forEach(TextEntity::removeFromGraph);
return;
}
possibleEntities.values().stream().flatMap(Collection::stream).forEach(TextEntity::removeFromGraph);
if (node.hasParent()) {
node = node.getParent();
} else {
break;
}
}
}
private void removeAndUpdateAndReInsertEntity(TextEntity entityToBeResized, ManualResizeRedaction manualResizeRedaction, int newStartOffset) {
private static void copyValuesFromClosestEntity(TextEntity entityToBeResized, ManualResizeRedaction manualResizeRedaction, TextEntity closestEntity) {
SemanticNode nodeToInsertInto = entityToBeResized.getDeepestFullyContainingNode().getDocumentTree().getRoot().getNode();
entityToBeResized.getIntersectingNodes().forEach(node -> node.getEntities().remove(this));
entityToBeResized.getPages().forEach(page -> page.getEntities().remove(this));
entityToBeResized.setIntersectingNodes(new LinkedList<>());
entityToBeResized.setDeepestFullyContainingNode(null);
entityToBeResized.setPages(new HashSet<>());
entityToBeResized.getTextRange().setStart(newStartOffset);
entityToBeResized.getTextRange().setEnd(newStartOffset + manualResizeRedaction.getValue().length());
entityCreationService.addEntityToGraph(entityToBeResized, nodeToInsertInto);
Set<SemanticNode> currentIntersectingNodes = new HashSet<>(entityToBeResized.getIntersectingNodes());
Set<SemanticNode> newIntersectingNodes = new HashSet<>(closestEntity.getIntersectingNodes());
Sets.difference(currentIntersectingNodes, newIntersectingNodes).forEach(removedNode -> removedNode.getEntities().remove(entityToBeResized));
Sets.difference(newIntersectingNodes, currentIntersectingNodes).forEach(addedNode -> addedNode.getEntities().add(entityToBeResized));
Set<Page> currentIntersectingPages = new HashSet<>(entityToBeResized.getPages());
Set<Page> newIntersectingPages = new HashSet<>(closestEntity.getPages());
Sets.difference(currentIntersectingPages, newIntersectingPages).forEach(removedPage -> removedPage.getEntities().remove(entityToBeResized));
Sets.difference(newIntersectingPages, currentIntersectingPages).forEach(addedPage -> addedPage.getEntities().add(entityToBeResized));
entityToBeResized.setDeepestFullyContainingNode(closestEntity.getDeepestFullyContainingNode());
entityToBeResized.setIntersectingNodes(new ArrayList<>(newIntersectingNodes));
entityToBeResized.setTextRange(closestEntity.getTextRange());
entityToBeResized.setTextAfter(closestEntity.getTextAfter());
entityToBeResized.setTextBefore(closestEntity.getTextBefore());
entityToBeResized.setDuplicateTextRanges(new ArrayList<>(closestEntity.getDuplicateTextRanges()));
entityToBeResized.setValue(closestEntity.getValue());
entityToBeResized.setPages(newIntersectingPages);
}
@@ -90,9 +141,9 @@ public class ManualChangesApplicationService {
}
private static Rectangle2D toRectangle2D(com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Rectangle rect) {
public static Rectangle2D toRectangle2D(com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Rectangle rect) {
return new Rectangle2D.Double(rect.getTopLeftX() - rect.getWidth(), rect.getTopLeftY() - rect.getHeight(), rect.getWidth(), rect.getHeight());
return new Rectangle2D.Double(rect.getTopLeftX(), rect.getTopLeftY(), rect.getWidth(), rect.getHeight());
}
}
@@ -0,0 +1,102 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.time.OffsetDateTime;
import java.util.Collection;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Change;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntryState;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.RectangleWithPage;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import org.springframework.stereotype.Service;
import io.micrometer.core.annotation.Timed;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Service
@Slf4j
@RequiredArgsConstructor
public class NotFoundImportedEntitiesService {
public static final String IMPORTED_REDACTION_TYPE = "imported_redaction";
@Timed("redactmanager_processEntityLog")
public void processEntityLog(EntityLog entityLog, AnalyzeRequest analyzeRequest, List<PrecursorEntity> notFoundEntities) {
// recreate imported redactions with manual changes
if (notFoundEntities == null || notFoundEntities.isEmpty()) {
log.debug("checkForImportedRedactions - no not found imported entities");
return;
}
// remove all intersections and update imported entities
calculateIntersectionsForNotFound(notFoundEntities, entityLog, analyzeRequest.getAnalysisNumber());
}
private void calculateIntersectionsForNotFound(List<PrecursorEntity> notFoundEntities, EntityLog entityLog, int analysisNumber) {
if (!notFoundEntities.isEmpty()) {
// imported redactions present, intersections must be added with merged imported redactions
Map<Integer, List<PrecursorEntity>> importedRedactionsMap = mapImportedRedactionsOnPage(notFoundEntities);
entityLog.getEntityLogEntry().stream().filter(entry -> !entry.getEngines().contains(Engine.IMPORTED)).forEach(redactionLogEntry -> {
redactionLogEntry.setImportedRedactionIntersections(new HashSet<>());
addIntersections(redactionLogEntry, importedRedactionsMap, analysisNumber);
});
}
}
public Map<Integer, List<PrecursorEntity>> mapImportedRedactionsOnPage(List<PrecursorEntity> importedEntities) {
Map<Integer, List<PrecursorEntity>> importedRedactionsMap = new HashMap<>();
Set<Integer> pageNumbers = importedEntities.stream()
.map(PrecursorEntity::getEntityPosition)
.flatMap(Collection::stream)
.map(RectangleWithPage::pageNumber)
.collect(Collectors.toSet());
pageNumbers.forEach(pageNumber -> importedRedactionsMap.put(pageNumber,
importedEntities.stream().filter(i -> pageNumber == i.getEntityPosition().get(0).pageNumber()).collect(Collectors.toList())));
return importedRedactionsMap;
}
public void addIntersections(EntityLogEntry entityLogEntry, Map<Integer, List<PrecursorEntity>> importedEntitiesMap, int analysisNumber) {
for (Position rectangle : entityLogEntry.getPositions()) {
if (importedEntitiesMap.containsKey(rectangle.getPageNumber())) {
var importedEntitiesOnPage = importedEntitiesMap.get(rectangle.getPageNumber());
for (PrecursorEntity precursorEntity : importedEntitiesOnPage) {
for (RectangleWithPage rectangleWithPage : precursorEntity.getEntityPosition()) {
if (rectangle.toRectangle2D().intersects(rectangleWithPage.rectangle2D())) {
if (entityLogEntry.getImportedRedactionIntersections() == null) {
entityLogEntry.setImportedRedactionIntersections(new HashSet<>());
}
entityLogEntry.getImportedRedactionIntersections().add(precursorEntity.getId());
if (entityLogEntry.getState() != EntryState.REMOVED) {
entityLogEntry.setState(EntryState.REMOVED);
entityLogEntry.getChanges().add(new Change(analysisNumber, ChangeType.REMOVED, OffsetDateTime.now()));
}
}
}
}
}
}
}
}
@@ -1,115 +0,0 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.time.OffsetDateTime;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Change;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ChangeType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogChanges;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import io.micrometer.core.annotation.Timed;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@RequiredArgsConstructor
public class RedactionChangeLogService {
private final RedactionStorageService redactionStorageService;
@Timed("redactmanager_computeChanges")
public RedactionLogChanges computeChanges(RedactionLog previousRedactionLog, RedactionLog currentRedactionLog, int analysisNumber) {
long start = System.currentTimeMillis();
if (previousRedactionLog == null) {
currentRedactionLog.getRedactionLogEntry().forEach(entry -> {
entry.getChanges().add(new Change(analysisNumber, ChangeType.ADDED, OffsetDateTime.now()));
});
return new RedactionLogChanges(currentRedactionLog, false);
}
List<RedactionLogEntry> previouslyExistingEntries = previousRedactionLog.getRedactionLogEntry().stream().filter(entry -> !entry.lastChangeIsRemoved()).toList();
Map<String, RedactionLogEntry> addedEntryIds = getEntriesThatExistInCurrentButNotInPreviousRedactionLog(currentRedactionLog, previouslyExistingEntries);
Set<String> removedIds = getEntryIdsThatExistInPreviousButNotInCurrentRedactionLog(currentRedactionLog, previouslyExistingEntries);
List<RedactionLogEntry> newRedactionLogEntries = previousRedactionLog.getRedactionLogEntry();
List<RedactionLogEntry> toRemove = new ArrayList<>();
newRedactionLogEntries.forEach(entry -> {
if (removedIds.contains(entry.getId()) && addedEntryIds.containsKey(entry.getId())) {
List<Change> changes = entry.getChanges();
changes.add(new Change(analysisNumber, ChangeType.CHANGED, OffsetDateTime.now()));
var newEntry = addedEntryIds.get(entry.getId());
newEntry.setChanges(changes);
addedEntryIds.put(entry.getId(), newEntry);
toRemove.add(entry);
} else if (removedIds.contains(entry.getId())) {
entry.getChanges().add(new Change(analysisNumber, ChangeType.REMOVED, OffsetDateTime.now()));
} else if (addedEntryIds.containsKey(entry.getId())) {
List<Change> changes = entry.getChanges();
changes.add(new Change(analysisNumber, ChangeType.ADDED, OffsetDateTime.now()));
var newEntry = addedEntryIds.get(entry.getId());
newEntry.setChanges(changes);
addedEntryIds.put(entry.getId(), newEntry);
toRemove.add(entry);
}
});
newRedactionLogEntries.removeAll(toRemove);
addedEntryIds.forEach((k, v) -> {
if (v.getChanges().isEmpty()) {
v.getChanges().add(new Change(analysisNumber, ChangeType.ADDED, OffsetDateTime.now()));
}
newRedactionLogEntries.add(v);
});
currentRedactionLog.setRedactionLogEntry(newRedactionLogEntries);
log.debug("Change computation took: {}", System.currentTimeMillis() - start);
return new RedactionLogChanges(currentRedactionLog, !addedEntryIds.isEmpty() || !removedIds.isEmpty());
}
private static Set<String> getEntryIdsThatExistInPreviousButNotInCurrentRedactionLog(RedactionLog currentRedactionLog, List<RedactionLogEntry> previouslyExistingEntries) {
Set<RedactionLogEntry> removed = new HashSet<>(previouslyExistingEntries);
currentRedactionLog.getRedactionLogEntry().forEach(removed::remove);
Set<String> removedIds = removed.stream().map(RedactionLogEntry::getId).collect(Collectors.toSet());
return removedIds;
}
private static Map<String, RedactionLogEntry> getEntriesThatExistInCurrentButNotInPreviousRedactionLog(RedactionLog currentRedactionLog,
List<RedactionLogEntry> previouslyExistingEntries) {
Set<RedactionLogEntry> currentExistingEntries = currentRedactionLog.getRedactionLogEntry()
.stream()
.filter(entry -> entry.getChanges().isEmpty() || !entry.lastChangeIsRemoved())
.collect(Collectors.toSet());
previouslyExistingEntries.forEach(currentExistingEntries::remove);
Map<String, RedactionLogEntry> addedIds = new HashMap<>();
currentExistingEntries.forEach(entry -> {
addedIds.put(entry.getId(), entry);
});
return addedIds;
}
}
@@ -1,291 +0,0 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.awt.geom.Rectangle2D;
import java.util.ArrayList;
import java.util.Collections;
import java.util.HashSet;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.Objects;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.beans.BeanUtils;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Comment;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Engine;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualChange;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.ManualRedactionType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Point;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogComment;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLogEntry;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.IEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.ManualChangeOverwrite;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Image;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.ImageType;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Service
@Slf4j
@RequiredArgsConstructor
public class RedactionLogCreatorService {
private final DictionaryService dictionaryService;
private final ManualChangeFactory manualChangeFactory;
public List<RedactionLogEntry> createRedactionLog(Document document,
String dossierTemplateId,
List<ManualEntity> notFoundManualRedactionEntries,
Map<String, List<Comment>> comments) {
List<RedactionLogEntry> entries = new ArrayList<>();
Set<String> processIds = new HashSet<>();
document.getEntities()
.stream().filter(RedactionLogCreatorService::notFalsePositiveOrFalseRecommendation)
.filter(IEntity::active)
.forEach(entityNode -> entries.addAll(toRedactionLogEntries(entityNode, dossierTemplateId, comments, processIds)));
document.streamAllImages().filter(image -> !image.removed()).forEach(imageNode -> entries.add(createRedactionLogEntry(imageNode, dossierTemplateId, comments)));
notFoundManualRedactionEntries.forEach(entityIdentifier -> entries.add(createRedactionLogEntry(entityIdentifier, dossierTemplateId, comments)));
return entries;
}
private static boolean notFalsePositiveOrFalseRecommendation(TextEntity textEntity) {
return !(textEntity.getEntityType() == EntityType.FALSE_POSITIVE || textEntity.getEntityType() == EntityType.FALSE_RECOMMENDATION);
}
private List<RedactionLogEntry> toRedactionLogEntries(TextEntity textEntity, String dossierTemplateId, Map<String, List<Comment>> comments, Set<String> processedIds) {
List<RedactionLogEntry> redactionLogEntities = new ArrayList<>();
for (PositionOnPage positionOnPage : textEntity.getPositionsOnPagePerPage()) {
// Duplicates should be removed. They might exist due to table extraction duplicating cells spanning multiple columns/rows.
if (processedIds.contains(positionOnPage.getId())) {
continue;
}
processedIds.add(positionOnPage.getId());
RedactionLogEntry redactionLogEntry = createRedactionLogEntry(textEntity, dossierTemplateId);
redactionLogEntry.setId(positionOnPage.getId());
redactionLogEntry.setComments(buildRedactionLogComments(comments, positionOnPage.getId()));
List<Rectangle> rectanglesPerLine = positionOnPage.getRectanglePerLine()
.stream()
.map(rectangle2D -> toRedactionLogRectangle(rectangle2D, positionOnPage.getPage().getNumber()))
.toList();
redactionLogEntry.setPositions(rectanglesPerLine);
redactionLogEntities.add(redactionLogEntry);
}
return redactionLogEntities;
}
private List<RedactionLogComment> buildRedactionLogComments(Map<String, List<Comment>> commentsPerId, String id) {
if (!commentsPerId.containsKey(id)) {
return Collections.emptyList();
}
List<Comment> comments = commentsPerId.get(id);
if (comments == null || comments.isEmpty()) {
return Collections.emptyList();
}
return toRedactionLogComments(comments);
}
private List<RedactionLogComment> toRedactionLogComments(List<Comment> comments) {
return comments.stream().map(this::toRedactionLogComment).toList();
}
private RedactionLogComment toRedactionLogComment(Comment comment) {
return new RedactionLogComment(comment.getId(),
comment.getUser(),
comment.getText(),
comment.getAnnotationId(),
comment.getFileId(),
comment.getDate(),
comment.getSoftDeletedTime());
}
private RedactionLogEntry createRedactionLogEntry(TextEntity entity, String dossierTemplateId) {
Set<String> referenceIds = new HashSet<>();
entity.references().stream().filter(TextEntity::active).forEach(ref -> ref.getPositionsOnPagePerPage().forEach(pos -> referenceIds.add(pos.getId())));
int sectionNumber = entity.getDeepestFullyContainingNode().getTreeId().isEmpty() ? 0 : entity.getDeepestFullyContainingNode().getTreeId().get(0);
boolean isHint = isHint(entity.getEntityType());
return RedactionLogEntry.builder().color(getColor(entity.getType(), dossierTemplateId, entity.applied(), isHint))
.reason(entity.buildReasonWithManualChangeDescriptions())
.legalBasis(entity.legalBasis())
.value(entity.getManualOverwrite().getValue().orElse(entity.getMatchedRule().isWriteValueWithLineBreaks() ? entity.getValueWithLineBreaks() : entity.getValue()))
.type(entity.getType())
.redacted(entity.applied())
.isHint(isHint)
.isRecommendation(entity.getEntityType().equals(EntityType.RECOMMENDATION))
.isFalsePositive(entity.getEntityType().equals(EntityType.FALSE_POSITIVE) || entity.getEntityType().equals(EntityType.FALSE_RECOMMENDATION))
.section(entity.getManualOverwrite().getSection().orElse(entity.getDeepestFullyContainingNode().toString()))
.sectionNumber(sectionNumber)
.matchedRule(entity.getMatchedRule().getRuleIdentifier().toString())
.isDictionaryEntry(entity.isDictionaryEntry())
.textAfter(entity.getTextAfter())
.textBefore(entity.getTextBefore())
.startOffset(entity.getTextRange().start())
.endOffset(entity.getTextRange().end())
.isDossierDictionaryEntry(entity.isDossierDictionaryEntry())
.engines(getEngines(entity))
.reference(referenceIds)
.manualChanges(mapManualChanges(entity.getManualOverwrite(), isHint))
.build();
}
private Set<Engine> getEngines(TextEntity entity) {
return entity.getEngines() != null ? mapToEngines(entity.getEngines()) : Collections.emptySet();
}
private Set<Engine> mapToEngines(Set<com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine> engines) {
return engines.stream().map(engine -> switch (engine) {
case NER -> Engine.NER;
case RULE -> Engine.RULE;
case DICTIONARY -> Engine.DICTIONARY;
default -> null;
}).filter(Objects::nonNull).collect(Collectors.toSet());
}
private boolean isHint(EntityType entityType) {
return entityType.equals(EntityType.HINT);
}
private List<ManualChange> mapManualChanges(ManualChangeOverwrite manualEntity, boolean isHint) {
return manualChangeFactory.toManualChangeList(manualEntity.getManualChangeLog(), isHint).stream().map(this::mapManualChange).toList();
}
private ManualChange mapManualChange(com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.ManualChange manualChange) {
ManualChange manualChange1 = new ManualChange();
BeanUtils.copyProperties(manualChange, manualChange1);
manualChange1.setManualRedactionType(switch (manualChange.getManualRedactionType()) {
case ADD_LOCALLY -> ManualRedactionType.ADD_LOCALLY;
case ADD_TO_DICTIONARY -> ManualRedactionType.ADD_TO_DICTIONARY;
case REMOVE_LOCALLY -> ManualRedactionType.REMOVE_LOCALLY;
case REMOVE_FROM_DICTIONARY -> ManualRedactionType.REMOVE_FROM_DICTIONARY;
case FORCE_REDACT -> ManualRedactionType.FORCE_REDACT;
case FORCE_HINT -> ManualRedactionType.FORCE_HINT;
case RECATEGORIZE -> ManualRedactionType.RECATEGORIZE;
case LEGAL_BASIS_CHANGE -> ManualRedactionType.LEGAL_BASIS_CHANGE;
case RESIZE -> ManualRedactionType.RESIZE;
});
manualChange1.setProcessedDate(manualChange.getProcessedDate());
manualChange1.setRequestedDate(manualChange.getRequestedDate());
manualChange1.setAnnotationStatus(manualChange.getAnnotationStatus());
manualChange1.setPropertyChanges(manualChange.getPropertyChanges());
return manualChange1;
}
private float[] getColor(String type, String dossierTemplateId, boolean isRedaction, boolean isHint) {
if (!isRedaction && isHint) {
return dictionaryService.getNotRedactedColor(dossierTemplateId);
}
return dictionaryService.getColor(type, dossierTemplateId);
}
public RedactionLogEntry createRedactionLogEntry(ManualEntity manualEntity, String dossierTemplateId, Map<String, List<Comment>> comments) {
String type = manualEntity.getManualOverwrite().getType().orElse(manualEntity.getType());
boolean isHint = isHint(manualEntity.getEntityType());
return RedactionLogEntry.builder()
.id(manualEntity.getId())
.color(getColor(type, dossierTemplateId, manualEntity.applied(), isHint))
.reason(manualEntity.buildReasonWithManualChangeDescriptions())
.legalBasis(manualEntity.legalBasis())
.value(manualEntity.value())
.type(type)
.redacted(manualEntity.applied())
.isHint(isHint)
.isRecommendation(manualEntity.getEntityType().equals(EntityType.RECOMMENDATION))
.isFalsePositive(manualEntity.getEntityType().equals(EntityType.FALSE_POSITIVE) || manualEntity.getEntityType().equals(EntityType.FALSE_RECOMMENDATION))
.section(manualEntity.getManualOverwrite().getSection().orElse(manualEntity.getSection()))
.sectionNumber(0)
.matchedRule(manualEntity.getMatchedRule().getRuleIdentifier().toString())
.rectangle(manualEntity.isRectangle())
.isDictionaryEntry(manualEntity.isDictionaryEntry())
.isDossierDictionaryEntry(manualEntity.isDossierDictionaryEntry())
.textAfter("")
.textBefore("")
.startOffset(-1)
.endOffset(-1)
.positions(manualEntity.getEntityPosition()
.stream()
.map(entityPosition -> toRedactionLogRectangle(entityPosition.rectangle2D(), entityPosition.pageNumber()))
.collect(Collectors.toList()))
.engines(Collections.emptySet())
.reference(Collections.emptySet())
.manualChanges(mapManualChanges(manualEntity.getManualOverwrite(), isHint))
.comments(buildRedactionLogComments(comments, manualEntity.getId()))
.build();
}
private Rectangle toRedactionLogRectangle(Rectangle2D rectangle2D, int pageNumber) {
return new Rectangle(new Point((float) rectangle2D.getMinX(), (float) rectangle2D.getMinY()), (float) rectangle2D.getWidth(), (float) rectangle2D.getHeight(), pageNumber);
}
public RedactionLogEntry createRedactionLogEntry(Image image, String dossierTemplateId, Map<String, List<Comment>> comments) {
String imageType = image.getImageType().equals(ImageType.OTHER) ? "image" : image.getImageType().toString().toLowerCase(Locale.ENGLISH);
boolean isHint = dictionaryService.isHint(imageType, dossierTemplateId);
return RedactionLogEntry.builder()
.id(image.getId()).color(getColor(imageType, dossierTemplateId, image.applied(), isHint))
.isImage(true)
.value(image.value())
.type(imageType)
.redacted(image.applied())
.reason(image.buildReasonWithManualChangeDescriptions())
.legalBasis(image.legalBasis())
.matchedRule(image.getMatchedRule().getRuleIdentifier().toString())
.isHint(isHint)
.isDictionaryEntry(false)
.isRecommendation(false)
.positions(List.of(toRedactionLogRectangle(image.getPosition(), image.getPage().getNumber())))
.sectionNumber(image.getTreeId().get(0))
.section(image.getManualOverwrite().getSection().orElse(image.getParent().toString()))
.imageHasTransparency(image.isTransparent())
.manualChanges(mapManualChanges(image.getManualOverwrite(), isHint))
.comments(buildRedactionLogComments(comments, image.getId()))
.build();
}
}
@@ -0,0 +1,198 @@
package com.iqser.red.service.redaction.v1.server.service;
import java.util.ArrayList;
import java.util.Collection;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Optional;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.amqp.rabbit.core.RabbitTemplate;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualResizeRedaction;
import com.iqser.red.service.redaction.v1.model.AnalyzeResponse;
import com.iqser.red.service.redaction.v1.model.QueueNames;
import com.iqser.red.service.redaction.v1.model.UnprocessedManualEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.service.document.DocumentGraphMapper;
import com.iqser.red.service.redaction.v1.server.service.document.EntityFindingUtility;
import com.iqser.red.service.redaction.v1.server.service.document.EntityFromPrecursorCreationService;
import com.iqser.red.service.redaction.v1.server.storage.ObservedStorageService;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import io.micrometer.observation.annotation.Observed;
import lombok.AccessLevel;
import lombok.RequiredArgsConstructor;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@RequiredArgsConstructor
@FieldDefaults(level = AccessLevel.PRIVATE)
public class UnprocessedChangesService {
private static final double THRESHOLD = 10;
final RabbitTemplate rabbitTemplate;
final ObservedStorageService observedStorageService;
final EntityFindingUtility entityFindingUtility;
final RedactionStorageService redactionStorageService;
final EntityFromPrecursorCreationService entityFromPrecursorCreationService;
final DictionaryService dictionaryService;
final ManualChangesApplicationService manualChangesApplicationService;
@Observed(name = "UnprocessedChangesService", contextualName = "analyse-surrounding-text")
public void analyseSurroundingText(AnalyzeRequest analyzeRequest) {
List<UnprocessedManualEntity> unprocessedManualEntities = new ArrayList<>();
dictionaryService.updateDictionary(analyzeRequest.getDossierTemplateId(), analyzeRequest.getDossierId());
EntityLog previousEntityLog = redactionStorageService.getEntityLog(analyzeRequest.getDossierId(), analyzeRequest.getFileId());
Document document = DocumentGraphMapper.toDocumentGraph(observedStorageService.getDocumentData(analyzeRequest.getDossierId(), analyzeRequest.getFileId()));
Set<String> allAnnotationIds = analyzeRequest.getManualRedactions().getEntriesToAdd()
.stream()
.map(ManualRedactionEntry::getAnnotationId)
.collect(Collectors.toSet());
Set<String> resizeIds = analyzeRequest.getManualRedactions().getResizeRedactions()
.stream()
.map(ManualResizeRedaction::getAnnotationId)
.collect(Collectors.toSet());
allAnnotationIds.addAll(resizeIds);
List<ManualResizeRedaction> manualResizeRedactions = analyzeRequest.getManualRedactions().getResizeRedactions()
.stream()
.toList();
List<PrecursorEntity> manualEntitiesToBeResized = previousEntityLog.getEntityLogEntry()
.stream()
.filter(entityLogEntry -> resizeIds.contains(entityLogEntry.getId()))
.toList()
.stream()
.map(PrecursorEntity::fromEntityLogEntry)
.toList();
if (!manualResizeRedactions.isEmpty()) {
processManualResizeRedactions(document, manualEntitiesToBeResized, unprocessedManualEntities, manualResizeRedactions);
}
List<PrecursorEntity> notFoundManualEntities = new ArrayList<>();
List<PrecursorEntity> manualEntities = manualEntitiesConverter(analyzeRequest.getManualRedactions(), analyzeRequest.getDossierTemplateId());
if (!manualEntities.isEmpty()) {
notFoundManualEntities = entityFromPrecursorCreationService.toTextEntity(manualEntities, document);
}
document.getEntities()
.forEach(textEntity -> {
Set<String> processedIds = new HashSet<>();
for (var positionsOnPerPage : textEntity.getPositionsOnPagePerPage()) {
if (processedIds.contains(positionsOnPerPage.getId())) {
continue;
}
processedIds.add(positionsOnPerPage.getId());
List<Position> positions = positionsOnPerPage.getRectanglePerLine()
.stream()
.map(rectangle2D -> new Position(rectangle2D, positionsOnPerPage.getPage().getNumber()))
.collect(Collectors.toList());
unprocessedManualEntities.add(UnprocessedManualEntity.builder()
.annotationId(allAnnotationIds.stream()
.filter(textEntity::matchesAnnotationId)
.findFirst()
.orElse(""))
.textBefore(textEntity.getTextBefore())
.textAfter(textEntity.getTextAfter())
.section(textEntity.getManualOverwrite().getSection()
.orElse(textEntity.getDeepestFullyContainingNode().toString()))
.positions(positions)
.build());
}
});
notFoundManualEntities.forEach(manualEntity -> unprocessedManualEntities.add(builDefaultUnprocessedManualEntity(manualEntity)));
rabbitTemplate.convertAndSend(QueueNames.REDACTION_ANALYSIS_RESPONSE_QUEUE,
AnalyzeResponse.builder().fileId(analyzeRequest.getFileId()).unprocessedManualEntities(unprocessedManualEntities).build());
}
private void processManualResizeRedactions(Document document,
List<PrecursorEntity> manualEntities,
List<UnprocessedManualEntity> unprocessedManualEntities,
List<ManualResizeRedaction> manualResizeRedactions) {
Map<String, List<TextEntity>> tempEntities = entityFindingUtility.findAllPossibleEntitiesAndGroupByValue(document, manualEntities);
for (PrecursorEntity precursorEntity : manualEntities) {
Optional<TextEntity> optionalTextEntity = entityFindingUtility.findClosestEntityAndReturnEmptyIfNotFound(precursorEntity, tempEntities, THRESHOLD);
if (optionalTextEntity.isEmpty()) {
unprocessedManualEntities.add(builDefaultUnprocessedManualEntity(precursorEntity));
continue;
}
TextEntity correctEntity = EntityFromPrecursorCreationService.createCorrectEntity(precursorEntity, optionalTextEntity.get());
Optional<ManualResizeRedaction> optionalManualResizeRedaction = manualResizeRedactions.stream()
.filter(manualResizeRedaction -> manualResizeRedaction.getAnnotationId().equals(precursorEntity.getId()))
.findFirst();
if (optionalManualResizeRedaction.isPresent()) {
ManualResizeRedaction manualResizeRedaction = optionalManualResizeRedaction.get();
manualChangesApplicationService.resize(correctEntity, manualResizeRedaction);
// If the entity's value is not the same as the manual resize request's value it means we didn't find it anywhere and we want to remove it
// from the graph, so it does not get processed and sent back to persistence-service to update its value.
if (!correctEntity.getValue().equals(manualResizeRedaction.getValue())) {
correctEntity.removeFromGraph();
}
}
}
// remove all temp entities from the graph
tempEntities.values()
.stream()
.flatMap(Collection::stream)
.forEach(TextEntity::removeFromGraph);
}
private UnprocessedManualEntity builDefaultUnprocessedManualEntity(PrecursorEntity precursorEntity) {
return UnprocessedManualEntity.builder()
.annotationId(precursorEntity.getId())
.textAfter("")
.textBefore("")
.section("")
.positions(precursorEntity.getManualOverwrite().getPositions()
.orElse(precursorEntity.getEntityPosition())
.stream()
.map(entityPosition -> new Position(entityPosition.rectangle2D(), entityPosition.pageNumber()))
.toList())
.build();
}
private List<PrecursorEntity> manualEntitiesConverter(ManualRedactions manualRedactions, String dossierTemplateId) {
return manualRedactions.getEntriesToAdd()
.stream()
.filter(manualRedactionEntry -> manualRedactionEntry.getPositions() != null && !manualRedactionEntry.getPositions().isEmpty())
.filter(BaseAnnotation::isLocal)
.map(manualRedactionEntry -> PrecursorEntity.fromManualRedactionEntry(manualRedactionEntry,
dictionaryService.isHint(manualRedactionEntry.getType(), dossierTemplateId)))
.toList();
}
}
@@ -19,6 +19,7 @@ import org.kie.api.runtime.KieSession;
import com.iqser.red.service.redaction.v1.server.model.component.Component;
import com.iqser.red.service.redaction.v1.server.model.component.Entity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Paragraph;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Table;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;
@@ -102,7 +103,11 @@ public class ComponentCreationService {
referencedEntities.addAll(references);
kieSession.insert(Component.builder().matchedRule(RuleIdentifier.fromString(ruleIdentifier)).name(name).value(value).valueDescription(valueDescription)
kieSession.insert(Component.builder()
.matchedRule(RuleIdentifier.fromString(ruleIdentifier))
.name(name)
.value(value)
.valueDescription(valueDescription)
.references(new LinkedList<>(references))
.build());
}
@@ -293,6 +298,30 @@ public class ComponentCreationService {
}
/**
* Counts the distinct rows where any of the provided entities occur and creates a component for each distinct table with its respective row count.
*
* @param ruleIdentifier the identifier of the rule
* @param name the name of the record
* @param entities the collection of entities to count row values from
*/
public void rowValueCount(String ruleIdentifier, String name, Collection<Entity> entities) {
entities.stream().collect(Collectors.groupingBy(this::getFirstTable)).forEach((optionalTable, groupedEntities) -> {
if (optionalTable.isEmpty()) {
return;
}
long count = groupedEntities.stream()
.collect(Collectors.groupingBy(entity -> getFirstTableCell(entity).map(TableCell::getRow).orElse(-1)))
.size();
create(ruleIdentifier, name, String.valueOf(count), "Count rows with values in the entity references in same table", entities);
});
}
/**
* Creates a component for each sentence in the collection of entities.
*
@@ -354,7 +383,9 @@ public class ComponentCreationService {
*/
public void createComponentsForUnMappedEntities(String ruleIdentifier, Collection<Entity> entities) {
entities.stream().filter(entity -> !referencedEntities.contains(entity)).sorted(EntityComparators.first())
entities.stream()
.filter(entity -> !referencedEntities.contains(entity))
.sorted(EntityComparators.first())
.forEach(entity -> create(ruleIdentifier, entity.getType(), entity.getValue(), "Unmapped Entity", List.of(entity)));
}
@@ -406,7 +437,7 @@ public class ComponentCreationService {
/**
* Joins values from entities that are in the same table row. If entities are not in a table cell they are added as a single component.
* Joins values from entities that are in the same table row. They are sorted from left to right. If entities are not in a table cell they are added as a single component.
*
* @param ruleIdentifier the identifier of the rule
* @param name the name of the entity
@@ -421,10 +452,6 @@ public class ComponentCreationService {
groupedEntities.forEach(entity -> create(ruleIdentifier, name, entity.getValue(), valueDescription, entity));
}
groupedEntities.stream()
.filter(entity -> !(entity.getContainingNode() instanceof TableCell))
.forEach(entity -> create(ruleIdentifier, name, entity.getValue(), valueDescription, entity));
groupedEntities.stream()
.filter(entity -> entity.getContainingNode() instanceof TableCell)
.collect(Collectors.groupingBy(entity -> ((TableCell) entity.getContainingNode()).getRow()))
@@ -434,7 +461,7 @@ public class ComponentCreationService {
.map(Map.Entry::getValue)
.forEach(entitiesInSameRow -> create(ruleIdentifier,
name,
entitiesInSameRow.stream().sorted(Comparator.comparing(Entity::getType).reversed()).map(Entity::getValue).collect(Collectors.joining(", ")),
entitiesInSameRow.stream().sorted(EntityComparators.first()).map(Entity::getValue).collect(Collectors.joining(", ")),
valueDescription,
entitiesInSameRow));
});
@@ -455,6 +482,20 @@ public class ComponentCreationService {
}
private Optional<TableCell> getFirstTableCell(Entity entity) {
SemanticNode node = entity.getContainingNode();
while (!(node instanceof TableCell)) {
if (!node.hasParent()) {
return Optional.empty();
}
node = node.getParent();
}
return Optional.of((TableCell) node);
}
/**
* Creates a new component with the given rule identifier, name, value, and value description.
* If the component is part of a table, it also takes a list of entities that belong to the same table row.
@@ -479,7 +520,9 @@ public class ComponentCreationService {
*/
public void create(String ruleIdentifier, String name, String value) {
kieSession.insert(Component.builder().matchedRule(RuleIdentifier.fromString(ruleIdentifier)).name(name)
kieSession.insert(Component.builder()
.matchedRule(RuleIdentifier.fromString(ruleIdentifier))
.name(name)
.value(value)
.valueDescription("")
.references(Collections.emptyList())
@@ -6,6 +6,7 @@ import java.util.LinkedList;
import java.util.List;
import java.util.Map;
import java.util.NoSuchElementException;
import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Footer;
@@ -76,6 +77,7 @@ public class DocumentGraphMapper {
node.setLeafTextBlock(textBlock);
}
List<Integer> treeId = Arrays.stream(entryData.getTreeId()).boxed().toList();
entryData.getEngines().forEach(engine -> node.addEngine(engine));
node.setTreeId(treeId);
switch (entryData.getType()) {
@@ -1,5 +1,6 @@
package com.iqser.red.service.redaction.v1.server.service.document;
import static com.iqser.red.service.redaction.v1.server.service.document.EntityCreationUtility.*;
import static com.iqser.red.service.redaction.v1.server.utils.SeparatorUtils.boundaryIsSurroundedBySeparators;
import java.util.Collection;
@@ -18,24 +19,22 @@ import org.kie.api.runtime.KieSession;
import com.google.common.base.Functions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Engine;
import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
import com.iqser.red.service.redaction.v1.server.model.NerEntities;
import com.iqser.red.service.redaction.v1.server.model.dictionary.SearchImplementation;
import com.iqser.red.service.redaction.v1.server.model.document.ConsecutiveBoundaryCollector;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentTree;
import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.ManualChangeOverwrite;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.NodeType;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Page;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Table;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
import com.iqser.red.service.redaction.v1.server.utils.RectangleTransformations;
import com.iqser.red.service.redaction.v1.server.utils.RedactionSearchUtility;
import com.iqser.red.service.redaction.v1.server.model.NerEntities;
import com.iqser.red.service.redaction.v1.server.model.dictionary.SearchImplementation;
import com.iqser.red.service.redaction.v1.server.utils.IdBuilder;
import com.iqser.red.service.redaction.v1.server.utils.exception.NotFoundException;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@@ -57,6 +56,8 @@ public class EntityCreationService {
public Stream<TextEntity> betweenStrings(String start, String stop, String type, EntityType entityType, SemanticNode node) {
checkIfBothStartAndEndAreEmpty(start, stop);
List<TextRange> startTextRanges = RedactionSearchUtility.findTextRangesByString(start, node.getTextBlock());
List<TextRange> stopTextRanges = RedactionSearchUtility.findTextRangesByString(stop, node.getTextBlock());
@@ -66,6 +67,8 @@ public class EntityCreationService {
public Stream<TextEntity> betweenStringsIgnoreCase(String start, String stop, String type, EntityType entityType, SemanticNode node) {
checkIfBothStartAndEndAreEmpty(start, stop);
List<TextRange> startBoundaries = RedactionSearchUtility.findTextRangesByStringIgnoreCase(start, node.getTextBlock());
List<TextRange> stopBoundaries = RedactionSearchUtility.findTextRangesByStringIgnoreCase(stop, node.getTextBlock());
@@ -75,6 +78,8 @@ public class EntityCreationService {
public Stream<TextEntity> betweenStringsIncludeStart(String start, String stop, String type, EntityType entityType, SemanticNode node) {
checkIfBothStartAndEndAreEmpty(start, stop);
List<TextRange> startBoundaries = RedactionSearchUtility.findTextRangesByString(start, node.getTextBlock());
List<TextRange> stopBoundaries = RedactionSearchUtility.findTextRangesByString(stop, node.getTextBlock());
@@ -89,6 +94,8 @@ public class EntityCreationService {
public Stream<TextEntity> betweenStringsIncludeStartIgnoreCase(String start, String stop, String type, EntityType entityType, SemanticNode node) {
checkIfBothStartAndEndAreEmpty(start, stop);
List<TextRange> startBoundaries = RedactionSearchUtility.findTextRangesByStringIgnoreCase(start, node.getTextBlock());
List<TextRange> stopBoundaries = RedactionSearchUtility.findTextRangesByStringIgnoreCase(stop, node.getTextBlock());
@@ -103,6 +110,8 @@ public class EntityCreationService {
public Stream<TextEntity> betweenStringsIncludeEnd(String start, String stop, String type, EntityType entityType, SemanticNode node) {
checkIfBothStartAndEndAreEmpty(start, stop);
List<TextRange> startBoundaries = RedactionSearchUtility.findTextRangesByString(start, node.getTextBlock());
List<TextRange> stopBoundaries = RedactionSearchUtility.findTextRangesByString(stop, node.getTextBlock());
@@ -117,6 +126,8 @@ public class EntityCreationService {
public Stream<TextEntity> betweenStringsIncludeEndIgnoreCase(String start, String stop, String type, EntityType entityType, SemanticNode node) {
checkIfBothStartAndEndAreEmpty(start, stop);
List<TextRange> startBoundaries = RedactionSearchUtility.findTextRangesByStringIgnoreCase(start, node.getTextBlock());
List<TextRange> stopBoundaries = RedactionSearchUtility.findTextRangesByStringIgnoreCase(stop, node.getTextBlock());
@@ -131,6 +142,8 @@ public class EntityCreationService {
public Stream<TextEntity> betweenStringsIncludeStartAndEnd(String start, String stop, String type, EntityType entityType, SemanticNode node) {
checkIfBothStartAndEndAreEmpty(start, stop);
List<TextRange> startBoundaries = RedactionSearchUtility.findTextRangesByString(start, node.getTextBlock());
List<TextRange> stopBoundaries = RedactionSearchUtility.findTextRangesByString(stop, node.getTextBlock());
@@ -149,6 +162,8 @@ public class EntityCreationService {
public Stream<TextEntity> betweenStringsIncludeStartAndEndIgnoreCase(String start, String stop, String type, EntityType entityType, SemanticNode node) {
checkIfBothStartAndEndAreEmpty(start, stop);
List<TextRange> startBoundaries = RedactionSearchUtility.findTextRangesByStringIgnoreCase(start, node.getTextBlock());
List<TextRange> stopBoundaries = RedactionSearchUtility.findTextRangesByStringIgnoreCase(stop, node.getTextBlock());
@@ -167,6 +182,8 @@ public class EntityCreationService {
public Stream<TextEntity> shortestBetweenAnyString(List<String> starts, List<String> stops, String type, EntityType entityType, SemanticNode node) {
checkIfBothStartAndEndAreEmpty(starts, stops);
List<TextRange> startTextRanges = RedactionSearchUtility.findTextRangesByList(starts, node.getTextBlock());
List<TextRange> stopTextRanges = RedactionSearchUtility.findTextRangesByList(stops, node.getTextBlock());
@@ -176,6 +193,8 @@ public class EntityCreationService {
public Stream<TextEntity> shortestBetweenAnyStringIgnoreCase(List<String> starts, List<String> stops, String type, EntityType entityType, SemanticNode node) {
checkIfBothStartAndEndAreEmpty(starts, stops);
List<TextRange> startTextRanges = RedactionSearchUtility.findTextRangesByListIgnoreCase(starts, node.getTextBlock());
List<TextRange> stopTextRanges = RedactionSearchUtility.findTextRangesByListIgnoreCase(stops, node.getTextBlock());
@@ -183,6 +202,17 @@ public class EntityCreationService {
}
public Stream<TextEntity> shortestBetweenAnyStringIgnoreCase(List<String> starts, List<String> stops, String type, EntityType entityType, SemanticNode node, int limit) {
checkIfBothStartAndEndAreEmpty(starts, stops);
List<TextRange> startTextRanges = RedactionSearchUtility.findTextRangesByListIgnoreCase(starts, node.getTextBlock());
List<TextRange> stopTextRanges = RedactionSearchUtility.findTextRangesByListIgnoreCase(stops, node.getTextBlock());
return betweenTextRanges(startTextRanges, stopTextRanges, type, entityType, node, limit);
}
public Stream<TextEntity> betweenRegexes(String regexStart, String regexStop, String type, EntityType entityType, SemanticNode node) {
TextBlock textBlock = node.getTextBlock();
@@ -205,11 +235,15 @@ public class EntityCreationService {
public Stream<TextEntity> betweenTextRanges(List<TextRange> startBoundaries, List<TextRange> stopBoundaries, String type, EntityType entityType, SemanticNode node) {
if (startBoundaries.isEmpty() || stopBoundaries.isEmpty()) {
return Stream.empty();
}
return betweenTextRanges(startBoundaries, stopBoundaries, type, entityType, node, 0);
}
public Stream<TextEntity> betweenTextRanges(List<TextRange> startBoundaries, List<TextRange> stopBoundaries, String type, EntityType entityType, SemanticNode node, int limit) {
List<TextRange> entityBoundaries = findNonOverlappingBoundariesBetweenBoundariesWithMinimalDistances(startBoundaries, stopBoundaries);
return entityBoundaries.stream()
.filter(range -> (limit == 0 || range.length() <= limit))
.map(textRange -> textRange.trim(node.getTextBlock()))
.filter(textRange -> isValidEntityTextRange(node.getTextBlock(), textRange))
.map(textRange -> byTextRange(textRange, type, entityType, node))
@@ -251,7 +285,8 @@ public class EntityCreationService {
public Stream<TextEntity> bySearchImplementation(SearchImplementation searchImplementation, String type, EntityType entityType, SemanticNode node) {
return searchImplementation.getBoundaries(node.getTextBlock(), node.getTextRange())
.stream().filter(boundary -> isValidEntityTextRange(node.getTextBlock(), boundary))
.stream()
.filter(boundary -> isValidEntityTextRange(node.getTextBlock(), boundary))
.map(bounds -> byTextRange(bounds, type, entityType, node))
.filter(Optional::isPresent)
.map(Optional::get);
@@ -263,7 +298,9 @@ public class EntityCreationService {
TextBlock textBlock = node.getTextBlock();
SearchImplementation searchImplementation = new SearchImplementation(strings, false);
return searchImplementation.getBoundaries(textBlock, node.getTextRange())
.stream().map(boundary -> toLineAfterTextRange(textBlock, boundary)).filter(boundary -> isValidEntityTextRange(textBlock, boundary))
.stream()
.map(boundary -> toLineAfterTextRange(textBlock, boundary))
.filter(boundary -> isValidEntityTextRange(textBlock, boundary))
.map(boundary -> byTextRange(boundary, type, entityType, node))
.filter(Optional::isPresent)
.map(Optional::get);
@@ -275,7 +312,9 @@ public class EntityCreationService {
TextBlock textBlock = node.getTextBlock();
SearchImplementation searchImplementation = new SearchImplementation(strings, true);
return searchImplementation.getBoundaries(textBlock, node.getTextRange())
.stream().map(boundary -> toLineAfterTextRange(textBlock, boundary)).filter(boundary -> isValidEntityTextRange(textBlock, boundary))
.stream()
.map(boundary -> toLineAfterTextRange(textBlock, boundary))
.filter(boundary -> isValidEntityTextRange(textBlock, boundary))
.map(boundary -> byTextRange(boundary, type, entityType, node))
.filter(Optional::isPresent)
.map(Optional::get);
@@ -286,7 +325,9 @@ public class EntityCreationService {
TextBlock textBlock = node.getTextBlock();
return RedactionSearchUtility.findTextRangesByString(string, textBlock)
.stream().map(boundary -> toLineAfterTextRange(textBlock, boundary)).filter(boundary -> isValidEntityTextRange(textBlock, boundary))
.stream()
.map(boundary -> toLineAfterTextRange(textBlock, boundary))
.filter(boundary -> isValidEntityTextRange(textBlock, boundary))
.map(boundary -> byTextRange(boundary, type, entityType, node))
.filter(Optional::isPresent)
.map(Optional::get);
@@ -297,7 +338,9 @@ public class EntityCreationService {
TextBlock textBlock = node.getTextBlock();
return RedactionSearchUtility.findTextRangesByStringIgnoreCase(string, textBlock)
.stream().map(boundary -> toLineAfterTextRange(textBlock, boundary)).filter(boundary -> isValidEntityTextRange(textBlock, boundary))
.stream()
.map(boundary -> toLineAfterTextRange(textBlock, boundary))
.filter(boundary -> isValidEntityTextRange(textBlock, boundary))
.map(boundary -> byTextRange(boundary, type, entityType, node))
.filter(Optional::isPresent)
.map(Optional::get);
@@ -306,7 +349,8 @@ public class EntityCreationService {
public Stream<TextEntity> lineAfterStringAcrossColumns(String string, String type, EntityType entityType, Table tableNode) {
return tableNode.streamTableCells().flatMap(tableCell -> lineAfterBoundariesAcrossColumns(RedactionSearchUtility.findTextRangesByString(string, tableCell.getTextBlock()),
return tableNode.streamTableCells()
.flatMap(tableCell -> lineAfterBoundariesAcrossColumns(RedactionSearchUtility.findTextRangesByString(string, tableCell.getTextBlock()),
tableCell,
type,
entityType,
@@ -499,7 +543,7 @@ public class EntityCreationService {
public Optional<TextEntity> byPrefixExpansionRegex(TextEntity entity, String regexPattern) {
int expandedStart = RedactionSearchUtility.getExpandedStartByRegex(entity, regexPattern);
return byTextRange(new TextRange(expandedStart, entity.getTextRange().end()), entity.getType(), entity.getEntityType(), entity.getDeepestFullyContainingNode());
return byTextRange(new TextRange(expandedStart, entity.getTextRange().end()), entity.type(), entity.getEntityType(), entity.getDeepestFullyContainingNode());
}
@@ -507,16 +551,7 @@ public class EntityCreationService {
int expandedEnd = RedactionSearchUtility.getExpandedEndByRegex(entity, regexPattern);
expandedEnd = truncateEndIfLineBreakIsBetween(entity.getTextRange().end(), expandedEnd, entity.getDeepestFullyContainingNode().getTextBlock());
return byTextRange(new TextRange(entity.getTextRange().start(), expandedEnd), entity.getType(), entity.getEntityType(), entity.getDeepestFullyContainingNode());
}
private int truncateEndIfLineBreakIsBetween(int end, int expandedEnd, TextBlock textBlock) {
if (textBlock.getNextLinebreak(end) < expandedEnd) {
return end;
}
return expandedEnd;
return byTextRange(new TextRange(entity.getTextRange().start(), expandedEnd), entity.type(), entity.getEntityType(), entity.getDeepestFullyContainingNode());
}
@@ -533,25 +568,68 @@ public class EntityCreationService {
*/
public Optional<TextEntity> byTextRange(TextRange textRange, String type, EntityType entityType, SemanticNode node) {
return byTextRangeWithEngine(textRange, type, entityType, node, Set.of(Engine.RULE));
}
/**
* Creates a redaction entity based on the given boundary, type, entity type, and semantic node.
* If the document already contains an equal redaction entity, then the original Entity is returned.
* Also inserts the Entity into the kieSession.
*
* @param textRange The boundary of the redaction entity.
* @param type The type of the redaction entity.
* @param entityType The entity type of the redaction entity.
* @param node The semantic node to associate with the redaction entity.
* @param engines Set of engines to be used.
* @return An Optional containing the redaction entity, or the previous entity if the entity already exists.
*/
public Optional<TextEntity> byTextRangeWithEngine(TextRange textRange, String type, EntityType entityType, SemanticNode node, Set<Engine> engines) {
if (!node.getTextRange().contains(textRange)) {
throw new IllegalArgumentException(String.format("%s is not in the %s of the provided semantic node %s", textRange, node.getTextRange(), node));
}
TextRange trimmedTextRange = textRange.trim(node.getTextBlock());
TextEntity entity = TextEntity.initialEntityNode(trimmedTextRange, type, entityType);
TextEntity entity = TextEntity.initialEntityNode(trimmedTextRange, type, entityType, node);
if (node.getEntities().contains(entity)) {
return node.getEntities().stream().filter(entity::equals).peek(e -> e.addEngine(Engine.RULE)).findAny();
Optional<TextEntity> optionalTextEntity = node.getEntities().stream().filter(e -> e.equals(entity) && e.type().equals(type)).peek(e -> e.addEngines(engines)).findAny();
if (optionalTextEntity.isEmpty()) {
return optionalTextEntity; // Entity has been recategorized and should not be created at all.
}
TextEntity existingEntity = optionalTextEntity.get();
if (existingEntity.getTextRange().equals(textRange)) {
return optionalTextEntity; // exactly the same entity, return directly
}
if (!existingEntity.resized()) {
addDuplicateEntityToGraph(existingEntity, textRange, node);
return optionalTextEntity; // If Entity has not been resized, insert as duplicate at appropriate position
}
return Optional.empty(); // Entity has been resized, if there are duplicates they should be treated there
}
addEntityToGraph(entity, node);
entity.addEngine(Engine.RULE);
entity.addEngines(engines);
insertToKieSession(entity);
return Optional.of(entity);
}
// Do not use anymore. This might not work correctly due to duplicate textranges not being taken into account here.
@Deprecated(forRemoval = true)
public TextEntity forceByTextRange(TextRange textRange, String type, EntityType entityType, SemanticNode node) {
TextRange trimmedTextRange = textRange.trim(node.getTextBlock());
TextEntity entity = TextEntity.initialEntityNode(trimmedTextRange, type, entityType);
TextEntity entity = TextEntity.initialEntityNode(trimmedTextRange, type, entityType, node);
addEntityToGraph(entity, node);
return entity;
}
// Do not use anymore. This might not work correctly due to duplicate textranges not being taken into account here.
@Deprecated(forRemoval = true)
public TextEntity forceByTextRange(TextRange textRange, String type, EntityType entityType, SemanticNode node, String id) {
TextRange trimmedTextRange = textRange.trim(node.getTextBlock());
TextEntity entity = TextEntity.initialEntityNode(trimmedTextRange, type, entityType, id);
addEntityToGraph(entity, node);
return entity;
}
@@ -569,7 +647,7 @@ public class EntityCreationService {
return entitiesToMerge.get(0);
}
TextEntity mergedEntity = TextEntity.initialEntityNode(TextRange.merge(entitiesToMerge.stream().map(TextEntity::getTextRange).toList()), type, entityType);
TextEntity mergedEntity = TextEntity.initialEntityNode(TextRange.merge(entitiesToMerge.stream().map(TextEntity::getTextRange).toList()), type, entityType, node);
mergedEntity.addEngines(entitiesToMerge.stream().flatMap(entityNode -> entityNode.getEngines().stream()).collect(Collectors.toSet()));
entitiesToMerge.stream().map(TextEntity::getMatchedRuleList).flatMap(Collection::stream).forEach(matchedRule -> mergedEntity.getMatchedRuleList().add(matchedRule));
entitiesToMerge.stream()
@@ -600,15 +678,14 @@ public class EntityCreationService {
return newEntity;
}
public TextEntity copyEntityWithoutRules(TextEntity entity, String type, EntityType entityType, SemanticNode node) {
TextEntity newEntity = TextEntity.initialEntityNode(entity.getTextRange(), type, entityType);
newEntity.addEngines(entity.getEngines());
TextEntity newEntity = byTextRangeWithEngine(entity.getTextRange(), type, entityType, node, entity.getEngines()).orElseThrow(() -> new NotFoundException(
"No entity present!"));
newEntity.getManualOverwrite().addChanges(entity.getManualOverwrite().getManualChangeLog());
newEntity.setDictionaryEntry(entity.isDictionaryEntry());
newEntity.setDossierDictionaryEntry(entity.isDossierDictionaryEntry());
addEntityToGraph(newEntity, node);
insertToKieSession(newEntity);
return newEntity;
}
@@ -623,42 +700,35 @@ public class EntityCreationService {
public TextEntity byNerEntity(NerEntities.NerEntity nerEntity, EntityType entityType, SemanticNode semanticNode) {
var entity = forceByTextRange(nerEntity.textRange(), nerEntity.type(), entityType, semanticNode);
entity.addEngine(Engine.NER);
insertToKieSession(entity);
return entity;
return byTextRangeWithEngine(nerEntity.textRange(), nerEntity.type(), entityType, semanticNode, Set.of(Engine.NER)).orElseThrow(() -> new NotFoundException(
"No entity present!"));
}
public TextEntity byNerEntity(NerEntities.NerEntity nerEntity, String type, EntityType entityType, SemanticNode semanticNode) {
var entity = forceByTextRange(nerEntity.textRange(), type, entityType, semanticNode);
entity.addEngine(Engine.NER);
insertToKieSession(entity);
return entity;
return byTextRangeWithEngine(nerEntity.textRange(), type, entityType, semanticNode, Set.of(Engine.NER)).orElseThrow(() -> new NotFoundException("No entity present!"));
}
public Optional<TextEntity> optionalByNerEntity(NerEntities.NerEntity nerEntity, EntityType entityType, SemanticNode semanticNode) {
return byTextRangeWithEngine(nerEntity.textRange(), nerEntity.type(), entityType, semanticNode, Set.of(Engine.NER));
}
public Optional<TextEntity> optionalByNerEntity(NerEntities.NerEntity nerEntity, String type, EntityType entityType, SemanticNode semanticNode) {
return byTextRangeWithEngine(nerEntity.textRange(), type, entityType, semanticNode, Set.of(Engine.NER));
}
public Stream<TextEntity> combineNerEntitiesToCbiAddressDefaults(NerEntities nerEntities, String type, EntityType entityType, SemanticNode semanticNode) {
return NerEntitiesAdapter.combineNerEntitiesToCbiAddressDefaults(nerEntities).map(boundary -> forceByTextRange(boundary, type, entityType, semanticNode))
.peek(entity -> entity.addEngine(Engine.NER))
.peek(this::insertToKieSession);
}
public TextEntity byTableCellAsHighlight(TableCell tableCell, String type, EntityType entityType) {
TextEntity highlightEntity = TextEntity.initialEntityNode(new TextRange(tableCell.getTextRange().start(), tableCell.getTextRange().start()), type, entityType);
String positionId = IdBuilder.buildId(tableCell.getBBox().keySet(), tableCell.getBBox().values().stream().toList(), type, entityType.name());
highlightEntity.setPositionsOnPagePerPage(tableCell.getBBox()
.entrySet()
.stream()
.map(entry -> new PositionOnPage(positionId, entry.getKey(), List.of(entry.getValue())))
.toList());
addEntityToGraph(highlightEntity, tableCell);
return highlightEntity;
return NerEntitiesAdapter.combineNerEntitiesToCbiAddressDefaults(nerEntities)
.map(boundary -> byTextRangeWithEngine(boundary, type, entityType, semanticNode, Set.of(Engine.NER)))
.filter(Optional::isPresent)
.map(Optional::get);
}
@@ -672,9 +742,17 @@ public class EntityCreationService {
DocumentTree documentTree = node.getDocumentTree();
try {
addEntityToGraph(entity, documentTree);
entity.addIntersectingNode(documentTree.getRoot().getNode());
documentTree.getRoot().getNode().getEntities().add(entity);
if (node.getEntities().contains(entity)) {
// If entity already exists and it has a different text range, we add the text range to the list of duplicated text ranges
node.getEntities().stream()//
.filter(e -> e.equals(entity))//
.filter(e -> !e.getTextRange().equals(entity.getTextRange()))//
.findAny()//
.ifPresent(entityToDuplicate -> addDuplicateEntityToGraph(entityToDuplicate, entity.getTextRange(), node));
} else {
entity.addIntersectingNode(documentTree.getRoot().getNode());
addEntityToGraph(entity, documentTree);
}
} catch (NoSuchElementException e) {
entity.setDeepestFullyContainingNode(documentTree.getRoot().getNode());
entityEnrichmentService.enrichEntity(entity, entity.getDeepestFullyContainingNode().getTextBlock());
@@ -685,6 +763,33 @@ public class EntityCreationService {
}
private void addDuplicateEntityToGraph(TextEntity entityToDuplicate, TextRange newTextRange, SemanticNode node) {
entityToDuplicate.addTextRange(newTextRange);
SemanticNode deepestSharedNode = entityToDuplicate.getIntersectingNodes()
.stream()
.sorted(Comparator.comparingInt(n -> -n.getTreeId().size()))
.filter(intersectingNode -> entityToDuplicate.getDuplicateTextRanges().stream().allMatch(tr -> intersectingNode.getTextRange().contains(tr)) && //
intersectingNode.getTextRange().contains(entityToDuplicate.getTextRange()))
.findFirst()
.orElse(node.getDocumentTree().getRoot().getNode());
entityToDuplicate.setDeepestFullyContainingNode(deepestSharedNode);
Set<SemanticNode> additionalIntersectingNodes = findIntersectingSubNodes(deepestSharedNode, newTextRange);
additionalIntersectingNodes.forEach(additionalIntersectingNode -> {
if (entityToDuplicate.getIntersectingNodes().contains(additionalIntersectingNode)) {
return;
}
additionalIntersectingNode.getEntities().add(entityToDuplicate);
additionalIntersectingNode.getPages(newTextRange).forEach(page -> page.getEntities().add(entityToDuplicate));
entityToDuplicate.addIntersectingNode(additionalIntersectingNode);
});
}
private void addEntityToGraph(TextEntity entity, DocumentTree documentTree) {
SemanticNode containingNode = documentTree.childNodes(Collections.emptyList())
@@ -702,45 +807,4 @@ public class EntityCreationService {
}
private static void addToPages(TextEntity entity) {
Set<Page> pages = entity.getDeepestFullyContainingNode().getPages(entity.getTextRange());
entity.getPages().addAll(pages);
pages.forEach(page -> page.getEntities().add(entity));
}
private static void addEntityToNodeEntitySets(TextEntity entity) {
entity.getIntersectingNodes().forEach(node -> node.getEntities().add(entity));
}
private static boolean allEntitiesIntersectAndHaveSameTypes(List<TextEntity> entitiesToMerge) {
if (entitiesToMerge.isEmpty()) {
return true;
}
TextEntity previousEntity = entitiesToMerge.get(0);
for (TextEntity textEntity : entitiesToMerge.subList(1, entitiesToMerge.size())) {
boolean typeMatches = textEntity.getType().equals(previousEntity.getType());
boolean entityTypeMatches = textEntity.getEntityType().equals(previousEntity.getEntityType());
boolean intersects = textEntity.intersects(previousEntity);
if (!typeMatches || !entityTypeMatches || !intersects) {
return false;
}
}
return true;
}
private static TextRange toLineAfterTextRange(TextBlock textBlock, TextRange textRange) {
if (textBlock.getTextRange().end() == textRange.end()) {
return new TextRange(textRange.end(), textRange.end());
}
return new TextRange(textRange.end(), textBlock.getNextLinebreak(textRange.end())).trim(textBlock);
}
}
@@ -0,0 +1,91 @@
package com.iqser.red.service.redaction.v1.server.service.document;
import java.util.List;
import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Page;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.TextBlock;
public class EntityCreationUtility {
public static void checkIfBothStartAndEndAreEmpty(String start, String end) {
checkIfBothStartAndEndAreEmpty(List.of(start), List.of(end));
}
public static <T> void checkIfBothStartAndEndAreEmpty(List<T> start, List<T> end) {
if ((start == null || start.isEmpty()) && (end == null || end.isEmpty())) {
throw new IllegalArgumentException("Start and end values are empty!");
}
}
public static int truncateEndIfLineBreakIsBetween(int end, int expandedEnd, TextBlock textBlock) {
if (textBlock.getNextLinebreak(end) < expandedEnd) {
return end;
}
return expandedEnd;
}
public static Set<SemanticNode> findIntersectingSubNodes(SemanticNode initialIntersectingNode, TextRange textRange) {
IntersectingNodeVisitor visitor = new IntersectingNodeVisitor(textRange);
if (initialIntersectingNode.getTextRange().intersects(textRange)) {
initialIntersectingNode.accept(visitor);
}
return visitor.getIntersectingNodes();
}
public static void addToPages(TextEntity entity) {
Set<Page> pages = entity.getDeepestFullyContainingNode().getPages(entity.getTextRange());
entity.getPages().addAll(pages);
pages.forEach(page -> page.getEntities().add(entity));
}
public static void addEntityToNodeEntitySets(TextEntity entity) {
entity.getIntersectingNodes().forEach(node -> node.getEntities().add(entity));
}
public static boolean allEntitiesIntersectAndHaveSameTypes(List<TextEntity> entitiesToMerge) {
if (entitiesToMerge.isEmpty()) {
return true;
}
TextEntity previousEntity = entitiesToMerge.get(0);
for (TextEntity textEntity : entitiesToMerge.subList(1, entitiesToMerge.size())) {
boolean typeMatches = textEntity.type().equals(previousEntity.type());
boolean entityTypeMatches = textEntity.getEntityType().equals(previousEntity.getEntityType());
boolean intersects = textEntity.intersects(previousEntity);
if (!typeMatches || !entityTypeMatches || !intersects) {
return false;
}
}
return true;
}
public static TextRange toLineAfterTextRange(TextBlock textBlock, TextRange textRange) {
if (textBlock.getTextRange().end() == textRange.end()) {
return new TextRange(textRange.end(), textRange.end());
}
return new TextRange(textRange.end(), textBlock.getNextLinebreak(textRange.end())).trim(textBlock);
}
}
@@ -0,0 +1,175 @@
package com.iqser.red.service.redaction.v1.server.service.document;
import static java.lang.String.format;
import static java.util.stream.Collectors.groupingBy;
import java.awt.geom.Rectangle2D;
import java.util.Collection;
import java.util.Collections;
import java.util.Comparator;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.Objects;
import java.util.Optional;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
import com.iqser.red.service.redaction.v1.server.model.ClosestEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.RectangleWithPage;
import com.iqser.red.service.redaction.v1.server.model.dictionary.SearchImplementation;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Page;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
public class EntityFindingUtility {
EntityCreationService entityCreationService;
DictionaryService dictionaryService;
@Autowired
public EntityFindingUtility(EntityEnrichmentService entityEnrichmentService, DictionaryService dictionaryService) {
entityCreationService = new EntityCreationService(entityEnrichmentService);
this.dictionaryService = dictionaryService;
}
public Optional<TextEntity> findClosestEntityAndReturnEmptyIfNotFound(PrecursorEntity precursorEntity, Map<String, List<TextEntity>> entitiesWithSameValue, double matchThreshold) {
if (precursorEntity.getValue() == null) {
return Optional.empty();
}
List<TextEntity> possibleEntities = entitiesWithSameValue.get(precursorEntity.getValue().toLowerCase(Locale.ENGLISH));
if (entityIdentifierValueNotFound(possibleEntities)) {
log.warn("Entity could not be created with precursorEntity: {}, due to the value {} not being found anywhere.", precursorEntity, precursorEntity.getValue());
return Optional.empty();
}
Optional<ClosestEntity> optionalClosestEntity = possibleEntities.stream()
.filter(entity -> pagesMatch(entity, precursorEntity.getEntityPosition()))
.map(entity -> ClosestEntity.builder().distance(calculateMinDistance(precursorEntity.getEntityPosition(), entity)).textEntity(entity).build())
.min(Comparator.comparingDouble(ClosestEntity::getDistance));
if (optionalClosestEntity.isEmpty()) {
log.warn("No Entity with value {} found on page {}", precursorEntity.getValue(), precursorEntity.getEntityPosition());
return Optional.empty();
}
ClosestEntity closestEntity = optionalClosestEntity.get();
if (closestEntity.getDistance() > matchThreshold) {
log.warn("For entity {} on page {} with positions {} distance to closest found entity is {} and therefore higher than the threshold of {}",
precursorEntity.getValue(),
precursorEntity.getEntityPosition().get(0).pageNumber(),
precursorEntity.getEntityPosition().stream().map(RectangleWithPage::rectangle2D).toList(),
closestEntity.getDistance(),
matchThreshold);
return Optional.empty();
}
return Optional.of(closestEntity.getTextEntity());
}
private static boolean entityIdentifierValueNotFound(List<TextEntity> possibleEntities) {
return possibleEntities == null || possibleEntities.isEmpty();
}
private static boolean pagesMatch(TextEntity entity, List<RectangleWithPage> originalPositions) {
Set<Integer> entityPageNumbers = entity.getPositionsOnPagePerPage().stream().map(PositionOnPage::getPage).map(Page::getNumber).collect(Collectors.toSet());
Set<Integer> originalPageNumbers = originalPositions.stream().map(RectangleWithPage::pageNumber).collect(Collectors.toSet());
return entityPageNumbers.containsAll(originalPageNumbers);
}
public static double calculateMinDistance(List<RectangleWithPage> originalPositions, TextEntity entity) {
if (originalPositions.size() != countRectangles(entity)) {
return Double.MAX_VALUE;
}
return originalPositions.stream()
.mapToDouble(rectangleWithPage -> calculateMinDistancePerRectangle(entity, rectangleWithPage.pageNumber(), rectangleWithPage.rectangle2D()))
.average()
.orElse(Double.MAX_VALUE);
}
private static long countRectangles(TextEntity entity) {
return entity.getPositionsOnPagePerPage().stream().mapToLong(redactionPosition -> redactionPosition.getRectanglePerLine().size()).sum();
}
private static double calculateMinDistancePerRectangle(TextEntity entity, int pageNumber, Rectangle2D originalRectangle) {
return entity.getPositionsOnPagePerPage()
.stream()
.filter(redactionPosition -> redactionPosition.getPage().getNumber() == pageNumber)
.map(PositionOnPage::getRectanglePerLine)
.flatMap(Collection::stream)
.mapToDouble(rectangle -> calculateDistance(rectangle, originalRectangle))
.min()
.orElse(Double.MAX_VALUE);
}
public static double calculateDistance(Rectangle2D rectangle1, Rectangle2D rectangle2) {
// mirrored coordinates safe comparison
double minX1 = Math.min(rectangle1.getMinX(), rectangle1.getMaxX());
double minY1 = Math.min(rectangle1.getMinY(), rectangle1.getMaxY());
double maxX1 = Math.max(rectangle1.getMinX(), rectangle1.getMaxX());
double maxY1 = Math.max(rectangle1.getMinY(), rectangle1.getMaxY());
double minX2 = Math.min(rectangle2.getMinX(), rectangle2.getMaxX());
double minY2 = Math.min(rectangle2.getMinY(), rectangle2.getMaxY());
double maxX2 = Math.max(rectangle2.getMinX(), rectangle2.getMaxX());
double maxY2 = Math.max(rectangle2.getMinY(), rectangle2.getMaxY());
return Math.abs(minX1 - minX2) //
+ Math.abs(minY1 - minY2) //
+ Math.abs(maxX1 - maxX2) //
+ Math.abs(maxY1 - maxY2);
}
public Map<String, List<TextEntity>> findAllPossibleEntitiesAndGroupByValue(SemanticNode node, List<PrecursorEntity> manualEntities) {
Set<Integer> pageNumbers = manualEntities.stream().flatMap(entry -> entry.getEntityPosition().stream().map(RectangleWithPage::pageNumber)).collect(Collectors.toSet());
Set<String> entryValues = manualEntities.stream().map(PrecursorEntity::getValue).filter(Objects::nonNull).map(String::toLowerCase).collect(Collectors.toSet());
if (!pageNumbers.stream().allMatch(node::onPage)) {
throw new IllegalArgumentException(format("SemanticNode \"%s\" does not contain these pages %s, it has pages: %s",
node,
pageNumbers.stream().filter(pageNumber -> !node.onPage(pageNumber)).toList(),
node.getPages()));
}
SearchImplementation searchImplementation = new SearchImplementation(entryValues, true);
return searchImplementation.getBoundaries(node.getTextBlock(), node.getTextRange())
.stream()
.map(boundary -> entityCreationService.byTextRangeWithEngine(boundary, "temp", EntityType.ENTITY, node, Collections.emptySet()))
.filter(Optional::isPresent)
.map(Optional::get)
.distinct()
.collect(groupingBy(entity -> entity.getValue().toLowerCase(Locale.ROOT)));
}
}
@@ -0,0 +1,161 @@
package com.iqser.red.service.redaction.v1.server.service.document;
import java.util.ArrayList;
import java.util.Collection;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Optional;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import lombok.AccessLevel;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
public class EntityFromPrecursorCreationService {
static double MATCH_THRESHOLD = 10; // Is compared to the average sum of distances in pdf coordinates for each corner of the bounding box of the entities
EntityFindingUtility entityFindingUtility;
EntityCreationService entityCreationService;
DictionaryService dictionaryService;
@Autowired
public EntityFromPrecursorCreationService(EntityEnrichmentService entityEnrichmentService, DictionaryService dictionaryService, EntityFindingUtility entityFindingUtility) {
this.entityFindingUtility = entityFindingUtility;
entityCreationService = new EntityCreationService(entityEnrichmentService);
this.dictionaryService = dictionaryService;
}
public List<PrecursorEntity> createEntitiesIfFoundAndReturnNotFoundEntries(ManualRedactions manualRedactions, SemanticNode node, String dossierTemplateId) {
Set<IdRemoval> idRemovals = manualRedactions.getIdsToRemove();
List<PrecursorEntity> manualEntities = manualRedactions.getEntriesToAdd()
.stream()
.filter(BaseAnnotation::isLocal)
.filter(manualRedactionEntry -> idRemovals.stream()
.filter(idRemoval -> idRemoval.getAnnotationId().equals(manualRedactionEntry.getAnnotationId()))
.filter(idRemoval -> idRemoval.getRequestDate().isBefore(manualRedactionEntry.getRequestDate()))
.findAny()//
.isEmpty())
.map(manualRedactionEntry -> //
PrecursorEntity.fromManualRedactionEntry(manualRedactionEntry, dictionaryService.isHint(manualRedactionEntry.getType(), dossierTemplateId)))
.peek(manualEntity -> {
if (manualEntity.getEntityType().equals(EntityType.HINT)) {
manualEntity.skip("MAN.5.1", "manual hint is skipped by default");
} else {
manualEntity.apply("MAN.5.0", "manual entries are applied by default", manualEntity.getLegalBasis());
}
})
.toList();
return toTextEntity(manualEntities, node);
}
public List<PrecursorEntity> createEntitiesIfFoundAndReturnNotFoundEntries(ImportedRedactions importedRedactions, SemanticNode node) {
List<PrecursorEntity> importedEntities = importedRedactions.getImportedRedactions()
.stream()
.map(PrecursorEntity::fromImportedEntry)
.peek(importedEntity -> importedEntity.apply("IMP.0.0", importedEntity.getReason(), importedEntity.getLegalBasis()))
.toList();
//we could add image handling here as well and create not only text entities
return toTextEntity(importedEntities, node);
}
public List<PrecursorEntity> toTextEntity(List<PrecursorEntity> precursorEntities, SemanticNode node) {
var notFoundEntities = precursorEntities.stream()
.filter(PrecursorEntity::isRectangle)
.collect(Collectors.toList());
var findableEntities = precursorEntities.stream()
.filter(precursorEntity -> !precursorEntity.isRectangle())
.toList();
Map<String, List<TextEntity>> tempEntitiesByValue = entityFindingUtility.findAllPossibleEntitiesAndGroupByValue(node, findableEntities);
for (PrecursorEntity precursorEntity : findableEntities) {
Optional<TextEntity> optionalClosestEntity = entityFindingUtility.findClosestEntityAndReturnEmptyIfNotFound(precursorEntity, tempEntitiesByValue, MATCH_THRESHOLD);
if (optionalClosestEntity.isEmpty()) {
notFoundEntities.add(precursorEntity);
continue;
}
createCorrectEntity(precursorEntity, optionalClosestEntity.get());
}
tempEntitiesByValue.values()
.stream()
.flatMap(Collection::stream)
.forEach(TextEntity::removeFromGraph);
return notFoundEntities;
}
/**
* Deletes the temp Entity and creates a RedactionEntity with correct values, based on the given parameters.
*
* @param precursorEntity The entity identifier for the RedactionEntity.
* @param closestEntity The closest Boundary to the RedactionEntity.
*/
public static TextEntity createCorrectEntity(PrecursorEntity precursorEntity, TextEntity closestEntity) {
return createCorrectEntity(precursorEntity, closestEntity, false);
}
public static TextEntity createCorrectEntity(PrecursorEntity precursorEntity, TextEntity closestEntity, boolean generateId) {
TextEntity correctEntity;
if (generateId) {
correctEntity = TextEntity.initialEntityNode(closestEntity.getTextRange(),
precursorEntity.type(),
precursorEntity.getEntityType(),
closestEntity.getDeepestFullyContainingNode());
} else {
correctEntity = TextEntity.initialEntityNode(closestEntity.getTextRange(), precursorEntity.type(), precursorEntity.getEntityType(), precursorEntity.getId());
}
correctEntity.setDeepestFullyContainingNode(closestEntity.getDeepestFullyContainingNode());
correctEntity.setIntersectingNodes(new ArrayList<>(closestEntity.getIntersectingNodes()));
correctEntity.setDuplicateTextRanges(new ArrayList<>(closestEntity.getDuplicateTextRanges()));
correctEntity.setPages(new HashSet<>(closestEntity.getPages()));
correctEntity.setValue(closestEntity.getValue());
correctEntity.setTextAfter(closestEntity.getTextAfter());
correctEntity.setTextBefore(closestEntity.getTextBefore());
correctEntity.getIntersectingNodes()
.forEach(n -> n.getEntities().add(correctEntity));
correctEntity.getPages()
.forEach(page -> page.getEntities().add(correctEntity));
correctEntity.addMatchedRules(precursorEntity.getMatchedRuleList());
correctEntity.setDictionaryEntry(precursorEntity.isDictionaryEntry());
correctEntity.setDossierDictionaryEntry(precursorEntity.isDossierDictionaryEntry());
correctEntity.getManualOverwrite().addChanges(precursorEntity.getManualOverwrite().getManualChangeLog());
correctEntity.addEngines(precursorEntity.getEngines());
return correctEntity;
}
}
@@ -0,0 +1,60 @@
package com.iqser.red.service.redaction.v1.server.service.document;
import java.util.Collection;
import java.util.Collections;
import java.util.List;
import java.util.stream.Stream;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import io.micrometer.observation.annotation.Observed;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@RequiredArgsConstructor
public class ImportedRedactionEntryService {
private final EntityFromPrecursorCreationService entityFromPrecursorCreationService;
@Observed(name = "ImportedRedactionEntryService", contextualName = "add-imported-redaction-entries")
public List<PrecursorEntity> addImportedEntriesAndReturnNotFoundEntries(AnalyzeRequest analyzeRequest, ImportedRedactions importedRedactions, Document document) {
List<PrecursorEntity> notFoundImportedEntries = Collections.emptyList();
if (!importedRedactions.getImportedRedactions().isEmpty()) {
notFoundImportedEntries = entityFromPrecursorCreationService.createEntitiesIfFoundAndReturnNotFoundEntries(importedRedactions, document);
log.info("Added Imported entries for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
}
if (notFoundImportedEntries.isEmpty()) {
return Collections.emptyList();
}
List<BaseAnnotation> manualChanges = allManualChangesExceptAdd(analyzeRequest.getManualRedactions());
for (PrecursorEntity notFoundManualRedactionEntry : notFoundImportedEntries) {
manualChanges.stream()
.filter(change -> change.getAnnotationId().equals(notFoundManualRedactionEntry.getId()))
.forEach(change -> notFoundManualRedactionEntry.getManualOverwrite().addChange(change));
}
return notFoundImportedEntries;
}
private List<BaseAnnotation> allManualChangesExceptAdd(ManualRedactions manualRedactions) {
return Stream.of(manualRedactions.getForceRedactions(),
manualRedactions.getResizeRedactions(),
manualRedactions.getRecategorizations(),
manualRedactions.getIdsToRemove(),
manualRedactions.getLegalBasisChanges()).flatMap(Collection::stream).map(baseAnnotation -> (BaseAnnotation) baseAnnotation).toList();
}
}
@@ -0,0 +1,31 @@
package com.iqser.red.service.redaction.v1.server.service.document;
import java.util.HashSet;
import java.util.Set;
import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import lombok.Getter;
public class IntersectingNodeVisitor implements NodeVisitor {
@Getter
private Set<SemanticNode> intersectingNodes;
private final TextRange textRange;
public IntersectingNodeVisitor(TextRange textRange) {
this.textRange = textRange;
this.intersectingNodes = new HashSet<>();
}
@Override
public void visit(SemanticNode node) {
if (node.getTextRange().intersects(textRange)) {
intersectingNodes.add(node);
}
}
}
@@ -1,249 +0,0 @@
package com.iqser.red.service.redaction.v1.server.service.document;
import static java.lang.String.format;
import static java.util.stream.Collectors.groupingBy;
import java.awt.geom.Rectangle2D;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Comparator;
import java.util.LinkedList;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.Optional;
import java.util.Set;
import java.util.stream.Collectors;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.ManualRedactionEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.RectangleWithPage;
import com.iqser.red.service.redaction.v1.server.model.dictionary.SearchImplementation;
import com.iqser.red.service.redaction.v1.server.model.document.TextRange;
import com.iqser.red.service.redaction.v1.server.model.document.entity.EntityType;
import com.iqser.red.service.redaction.v1.server.model.document.entity.PositionOnPage;
import com.iqser.red.service.redaction.v1.server.model.document.entity.TextEntity;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Page;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import lombok.AccessLevel;
import lombok.experimental.FieldDefaults;
import lombok.extern.slf4j.Slf4j;
@Slf4j
@Service
@FieldDefaults(makeFinal = true, level = AccessLevel.PRIVATE)
public class ManualEntityCreationService {
static double MATCH_THRESHOLD = 5; // Is compared to the sum of distances in pdf coordinates for each corner of the bounding box of the entities
EntityCreationService entityCreationService;
DictionaryService dictionaryService;
@Autowired
public ManualEntityCreationService(EntityEnrichmentService entityEnrichmentService, DictionaryService dictionaryService) {
entityCreationService = new EntityCreationService(entityEnrichmentService);
this.dictionaryService = dictionaryService;
}
public List<ManualEntity> toRedactionEntity(RedactionLog redactionLog, SemanticNode node) {
List<ManualEntity> manualEntities = redactionLog.getRedactionLogEntry().stream().map(ManualEntity::fromRedactionLogEntry).peek(manualEntity -> {
if (manualEntity.isApplied()) {
manualEntity.apply(manualEntity.getRuleIdentifier(), manualEntity.getReason(), manualEntity.getLegalBasis());
} else {
manualEntity.skip(manualEntity.getRuleIdentifier(), manualEntity.getReason());
}
}).toList();
return toRedactionEntity(manualEntities, node);
}
public List<ManualEntity> createRedactionEntitiesIfFoundAndReturnNotFoundEntries(Set<ManualRedactionEntry> manualRedactionEntries,
SemanticNode node,
String dossierTemplateId) {
List<ManualEntity> manualEntities = manualRedactionEntries.stream()
.filter(manualRedactionEntry -> !(manualRedactionEntry.isAddToDictionary() || manualRedactionEntry.isAddToDossierDictionary()))
.map(manualRedactionEntry -> ManualEntity.fromManualRedactionEntry(manualRedactionEntry,
dictionaryService.isHint(manualRedactionEntry.getType(), dossierTemplateId)))
.peek(manualEntity -> manualEntity.apply("MAN.5.0", "manual entries are applied by default", manualEntity.getLegalBasis()))
.toList();
return toRedactionEntity(manualEntities, node);
}
private List<ManualEntity> toRedactionEntity(List<ManualEntity> manualEntities, SemanticNode node) {
Set<Integer> pageNumbers = manualEntities.stream().flatMap(entry -> entry.getEntityPosition().stream().map(RectangleWithPage::pageNumber)).collect(Collectors.toSet());
Set<String> entryValues = manualEntities.stream().map(ManualEntity::getValue).map(String::toLowerCase).collect(Collectors.toSet());
Map<String, List<TextEntity>> tempEntitiesByValue = findAllPossibleEntitiesAndGroupByValue(node, pageNumbers, entryValues);
List<ManualEntity> notFoundManualEntities = new LinkedList<>();
for (ManualEntity manualEntity : manualEntities) {
Optional<TextEntity> optionalRedactionEntity = findClosestEntityAndReturnEmptyIfNotFound(manualEntity, tempEntitiesByValue);
if (optionalRedactionEntity.isEmpty()) {
notFoundManualEntities.add(manualEntity);
continue;
}
createCorrectEntity(manualEntity, node, optionalRedactionEntity.get().getTextRange());
}
tempEntitiesByValue.values().stream().flatMap(Collection::stream).forEach(TextEntity::removeFromGraph);
return notFoundManualEntities;
}
/**
* Deletes the temp Entity and creates a RedactionEntity with correct values, based on the given parameters.
*
* @param manualEntity The entity identifier for the RedactionEntity.
* @param node The SemanticNode associated with the RedactionEntity.
* @param closestTextRange The closest Boundary to the RedactionEntity.
*/
private void createCorrectEntity(ManualEntity manualEntity, SemanticNode node, TextRange closestTextRange) {
TextEntity correctEntity = entityCreationService.forceByTextRange(closestTextRange, manualEntity.getType(), manualEntity.getEntityType(), node);
correctEntity.addMatchedRules(manualEntity.getMatchedRuleList());
correctEntity.setDictionaryEntry(manualEntity.isDictionaryEntry());
correctEntity.setDossierDictionaryEntry(manualEntity.isDossierDictionaryEntry());
correctEntity.getManualOverwrite().addChanges(manualEntity.getManualOverwrite().getManualChangeLog());
// AnnotationIds must match the IDs in the add requests, or comments break. Maybe think about migrating IDs on the fly!
List<PositionOnPage> redactionPositionsWithIdOfManualOnPage = new ArrayList<>(correctEntity.getPositionsOnPagePerPage().size());
for (PositionOnPage positionOnPage : correctEntity.getPositionsOnPagePerPage()) {
redactionPositionsWithIdOfManualOnPage.add(new PositionOnPage(manualEntity.getId(), positionOnPage.getPage(), positionOnPage.getRectanglePerLine()));
}
correctEntity.setPositionsOnPagePerPage(redactionPositionsWithIdOfManualOnPage);
}
private Optional<TextEntity> findClosestEntityAndReturnEmptyIfNotFound(ManualEntity identifier, Map<String, List<TextEntity>> entitiesWithSameValue) {
List<TextEntity> possibleEntities = entitiesWithSameValue.get(identifier.getValue().toLowerCase(Locale.ENGLISH));
if (entityIdentifierValueNotFound(possibleEntities)) {
log.warn("Entity could not be created with identifier: {}, due to the value {} not being found anywhere.", identifier, identifier.getValue());
return Optional.empty();
}
Optional<TextEntity> optionalClosestEntity = possibleEntities.stream()
.filter(entity -> pagesMatch(entity, identifier.getEntityPosition()))
.min(Comparator.comparingDouble(entity -> calculateMinDistance(identifier.getEntityPosition(), entity)));
if (optionalClosestEntity.isEmpty()) {
log.warn("No Entity with value {} found on page {}", identifier.getValue(), identifier.getEntityPosition());
return Optional.empty();
}
TextEntity closestEntity = optionalClosestEntity.get();
double distance = calculateMinDistance(identifier.getEntityPosition(), closestEntity);
if (distance > MATCH_THRESHOLD) {
log.warn(format("Distance to closest found entity is %.2f and therefore higher than the threshold of %.2f for \n%s \n%s",
distance,
MATCH_THRESHOLD,
identifier.getEntityPosition(),
closestEntity.getPositionsOnPagePerPage()));
return Optional.empty();
}
return Optional.of(closestEntity);
}
private static boolean entityIdentifierValueNotFound(List<TextEntity> possibleEntities) {
return possibleEntities == null || possibleEntities.isEmpty();
}
private Map<String, List<TextEntity>> findAllPossibleEntitiesAndGroupByValue(SemanticNode node, Set<Integer> pageNumbers, Set<String> entryValues) {
if (!pageNumbers.stream().allMatch(node::onPage)) {
throw new IllegalArgumentException(format("SemanticNode \"%s\" does not contain these pages %s, it has pages: %s",
node,
pageNumbers.stream().filter(pageNumber -> !node.onPage(pageNumber)).toList(),
node.getPages()));
}
SearchImplementation searchImplementation = new SearchImplementation(entryValues, true);
return searchImplementation.getBoundaries(node.getTextBlock(), node.getTextRange())
.stream().map(boundary -> entityCreationService.forceByTextRange(boundary, "temp", EntityType.ENTITY, node))
.collect(groupingBy(entity -> entity.getValue().toLowerCase(Locale.ROOT)));
}
private static boolean allValuesFound(Map<String, List<TextEntity>> entitiesByValue, Set<String> entryValues) {
return entitiesByValue.keySet().equals(entryValues);
}
private static boolean pagesMatch(TextEntity entity, List<RectangleWithPage> originalPositions) {
Set<Integer> entityPageNumbers = entity.getPositionsOnPagePerPage().stream().map(PositionOnPage::getPage).map(Page::getNumber).collect(Collectors.toSet());
Set<Integer> originalPageNumbers = originalPositions.stream().map(RectangleWithPage::pageNumber).collect(Collectors.toSet());
return entityPageNumbers.containsAll(originalPageNumbers);
}
private double calculateMinDistance(List<RectangleWithPage> originalPositions, TextEntity entity) {
if (originalPositions.size() != countRectangles(entity)) {
return Double.MAX_VALUE;
}
return originalPositions.stream()
.mapToDouble(rectangleWithPage -> calculateMinDistancePerRectangle(entity, rectangleWithPage.pageNumber(), rectangleWithPage.rectangle2D()))
.sum();
}
private static long countRectangles(TextEntity entity) {
return entity.getPositionsOnPagePerPage().stream().mapToLong(redactionPosition -> redactionPosition.getRectanglePerLine().size()).sum();
}
private double calculateMinDistancePerRectangle(TextEntity entity, int pageNumber, Rectangle2D originalRectangle) {
return entity.getPositionsOnPagePerPage()
.stream()
.filter(redactionPosition -> redactionPosition.getPage().getNumber() == pageNumber)
.map(PositionOnPage::getRectanglePerLine)
.flatMap(Collection::stream)
.mapToDouble(rectangle -> calculateDistance(rectangle, originalRectangle))
.min()
.orElse(Double.MAX_VALUE);
}
private double calculateDistance(Rectangle2D rectangle, Rectangle2D rectangle2D) {
// mirrored coordinates safe comparison
double minX1 = Math.min(rectangle.getMinX(), rectangle.getMaxX());
double minY1 = Math.min(rectangle.getMinY(), rectangle.getMaxY());
double maxX1 = Math.max(rectangle.getMinX(), rectangle.getMaxX());
double maxY1 = Math.max(rectangle.getMinY(), rectangle.getMaxY());
double minX2 = Math.min(rectangle2D.getMinX(), rectangle2D.getMaxX());
double minY2 = Math.min(rectangle2D.getMinY(), rectangle2D.getMaxY());
double maxX2 = Math.max(rectangle2D.getMinX(), rectangle2D.getMaxX());
double maxY2 = Math.max(rectangle2D.getMinY(), rectangle2D.getMaxY());
return Math.abs(minX1 - minX2) //
+ Math.abs(minY1 - minY2) //
+ Math.abs(maxX1 - maxX2) //
+ Math.abs(maxY1 - maxY2);
}
}
@@ -11,8 +11,9 @@ import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequ
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.ManualEntity;
import com.iqser.red.service.redaction.v1.server.model.PrecursorEntity;
import io.micrometer.observation.annotation.Observed;
import lombok.RequiredArgsConstructor;
import lombok.extern.slf4j.Slf4j;
@@ -21,22 +22,24 @@ import lombok.extern.slf4j.Slf4j;
@RequiredArgsConstructor
public class ManualRedactionEntryService {
private final ManualEntityCreationService manualEntityCreationService;
private final EntityFromPrecursorCreationService entityFromPrecursorCreationService;
public List<ManualEntity> addManualRedactionEntriesAndReturnNotFoundEntries(AnalyzeRequest analyzeRequest, Document document, String dossierTemplateId) {
@Observed(name = "ManualRedactionEntryService", contextualName = "add-manual-redaction-entries")
public List<PrecursorEntity> addManualRedactionEntriesAndReturnNotFoundEntries(AnalyzeRequest analyzeRequest, Document document, String dossierTemplateId) {
List<ManualEntity> notFoundManualRedactionEntries = Collections.emptyList();
List<PrecursorEntity> notFoundManualRedactionEntries = Collections.emptyList();
if (analyzeRequest.getManualRedactions() != null) {
notFoundManualRedactionEntries = manualEntityCreationService.createRedactionEntitiesIfFoundAndReturnNotFoundEntries(analyzeRequest.getManualRedactions()
.getEntriesToAdd(), document, dossierTemplateId);
notFoundManualRedactionEntries = entityFromPrecursorCreationService.createEntitiesIfFoundAndReturnNotFoundEntries(analyzeRequest.getManualRedactions(),
document, dossierTemplateId);
log.info("Added Manual redaction entries for file {} in dossier {}", analyzeRequest.getFileId(), analyzeRequest.getDossierId());
}
if (notFoundManualRedactionEntries.isEmpty()) {
return Collections.emptyList();
}
List<BaseAnnotation> manualChanges = allManualChangesExceptAdd(analyzeRequest.getManualRedactions());
for (ManualEntity notFoundManualRedactionEntry : notFoundManualRedactionEntries) {
for (PrecursorEntity notFoundManualRedactionEntry : notFoundManualRedactionEntries) {
manualChanges.stream()
.filter(change -> change.getAnnotationId().equals(notFoundManualRedactionEntry.getId()))
.forEach(change -> notFoundManualRedactionEntry.getManualOverwrite().addChange(change));
@@ -0,0 +1,8 @@
package com.iqser.red.service.redaction.v1.server.service.document;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
public interface NodeVisitor {
void visit(SemanticNode node);
}
@@ -13,6 +13,9 @@ import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLogEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedaction;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.IdRemoval;
@@ -40,7 +43,11 @@ import lombok.extern.slf4j.Slf4j;
public class SectionFinderService {
@Timed("redactmanager_findSectionsToReanalyse")
public Set<Integer> findSectionsToReanalyse(DictionaryIncrement dictionaryIncrement, EntityLog entityLog, Document document, AnalyzeRequest analyzeRequest) {
public Set<Integer> findSectionsToReanalyse(DictionaryIncrement dictionaryIncrement,
EntityLog entityLog,
Document document,
AnalyzeRequest analyzeRequest,
ImportedRedactions importedRedactions) {
long start = System.currentTimeMillis();
Set<String> relevantManuallyModifiedAnnotationIds = getRelevantManuallyModifiedAnnotationIds(analyzeRequest.getManualRedactions());
@@ -50,20 +57,26 @@ public class SectionFinderService {
if (entry.getContainingNodeId().isEmpty()) {
continue; // Empty list means either Entity has not been found or it is between main sections. Thus, this might lead to wrong reanalysis.
}
sectionsToReanalyse.add(entry.getContainingNodeId().get(0));
sectionsToReanalyse.add(entry.getContainingNodeId()
.get(0));
}
}
var dictionaryIncrementsSearch = new SearchImplementation(dictionaryIncrement.getValues().stream().map(DictionaryIncrementValue::getValue).collect(Collectors.toList()),
true);
var dictionaryIncrementsSearch = new SearchImplementation(dictionaryIncrement.getValues()
.stream()
.map(DictionaryIncrementValue::getValue)
.toList(), true);
document.streamChildren().forEach(mainNode -> {
if (dictionaryIncrementsSearch.atLeastOneMatches(mainNode.getTextBlock().getSearchText())) {
sectionsToReanalyse.add(mainNode.getTreeId().get(0));
}
});
document.streamChildren()
.forEach(mainNode -> {
if (dictionaryIncrementsSearch.atLeastOneMatches(mainNode.getTextBlock().getSearchText())) {
sectionsToReanalyse.add(mainNode.getTreeId()
.get(0));
}
});
Set<Integer> relevantPagesForReanalysis = getRelevantPageNumbersForAddRedactions(analyzeRequest);
relevantPagesForReanalysis.addAll(getRelevantPageNumbersForImportedRedactions(importedRedactions, relevantManuallyModifiedAnnotationIds));
if (!relevantPagesForReanalysis.isEmpty()) {
sectionsToReanalyse.addAll(getSectionNumbersOnPages(document, relevantPagesForReanalysis));
}
@@ -79,8 +92,11 @@ public class SectionFinderService {
return document.getPages()
.stream()
.filter(page -> relevantPagesForReanalysis.contains(page.getNumber()))
.flatMap(page -> Stream.concat(page.getMainBody().stream().filter(node -> node.getType().equals(NodeType.SECTION)), Stream.of(page.getHeader(), page.getFooter())))
.map(node -> node.getTreeId().get(0))
.flatMap(page -> Stream.concat(page.getMainBody()
.stream()
.filter(node -> node.getType().equals(NodeType.SECTION)), Stream.of(page.getHeader(), page.getFooter())))
.map(node -> node.getTreeId()
.get(0))
.toList();
}
@@ -91,8 +107,7 @@ public class SectionFinderService {
return Collections.emptySet();
}
return analyzeRequest.getManualRedactions()
.getEntriesToAdd()
return analyzeRequest.getManualRedactions().getEntriesToAdd()
.stream()
.filter(addRedaction -> !(addRedaction.isAddToDictionary() || addRedaction.isAddToDossierDictionary()))
.map(ManualRedactionEntry::getPositions)
@@ -102,17 +117,44 @@ public class SectionFinderService {
}
private static Set<Integer> getRelevantPageNumbersForImportedRedactions(ImportedRedactions importedRedactions, Set<String> idsWithUnprocessedManualChanges) {
if (importedRedactions == null || importedRedactions.getImportedRedactions() == null) {
return Collections.emptySet();
}
return importedRedactions.getImportedRedactions()
.stream()
.filter(importedRedaction -> idsWithUnprocessedManualChanges.contains(importedRedaction.getId()))
.map(ImportedRedaction::getPositions)
.flatMap(Collection::stream)
.map(Position::getPageNumber)
.collect(Collectors.toSet());
}
private static Set<String> getRelevantManuallyModifiedAnnotationIds(ManualRedactions manualRedactions) {
if (manualRedactions == null) {
return new HashSet<>();
}
return Stream.concat(manualRedactions.getResizeRedactions().stream().map(ManualResizeRedaction::getAnnotationId),
Stream.concat(manualRedactions.getLegalBasisChanges().stream().map(ManualLegalBasisChange::getAnnotationId),
Stream.concat(manualRedactions.getRecategorizations().stream().map(ManualRecategorization::getAnnotationId),
Stream.concat(manualRedactions.getIdsToRemove().stream().map(IdRemoval::getAnnotationId),
manualRedactions.getForceRedactions().stream().map(ManualForceRedaction::getAnnotationId))))).collect(Collectors.toSet());
return Stream.concat(manualRedactions.getResizeRedactions()
.stream()
.map(ManualResizeRedaction::getAnnotationId),
Stream.concat(manualRedactions.getLegalBasisChanges()
.stream()
.map(ManualLegalBasisChange::getAnnotationId),
Stream.concat(manualRedactions.getRecategorizations()
.stream()
.map(ManualRecategorization::getAnnotationId),
Stream.concat(manualRedactions.getIdsToRemove()
.stream()
.map(IdRemoval::getAnnotationId),
manualRedactions.getForceRedactions()
.stream()
.map(ManualForceRedaction::getAnnotationId)))))
.collect(Collectors.toSet());
}
}
@@ -1,98 +1,198 @@
package com.iqser.red.service.redaction.v1.server.service.drools;
import java.util.ArrayList;
import java.util.Comparator;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.regex.Pattern;
import java.util.stream.Collectors;
import org.drools.drl.parser.DroolsParserException;
import org.kie.api.builder.KieBuilder;
import org.kie.api.builder.Message;
import org.springframework.stereotype.Service;
import com.google.common.collect.Sets;
import com.iqser.red.service.persistence.service.v1.api.shared.model.RuleFileType;
import com.iqser.red.service.redaction.v1.model.DroolsSyntaxDeprecatedWarnings;
import com.iqser.red.service.redaction.v1.model.DroolsSyntaxErrorMessage;
import com.iqser.red.service.redaction.v1.model.DroolsSyntaxValidation;
import com.iqser.red.service.redaction.v1.model.RuleValidationModel;
import com.iqser.red.service.redaction.v1.server.DeprecatedElementsFinder;
import com.iqser.red.service.redaction.v1.server.model.dictionary.SearchImplementation;
import com.iqser.red.service.redaction.v1.server.model.drools.BasicQuery;
import com.iqser.red.service.redaction.v1.server.model.drools.BasicRule;
import com.iqser.red.service.redaction.v1.server.model.drools.RuleClass;
import com.iqser.red.service.redaction.v1.server.model.drools.RuleFileBluePrint;
import com.iqser.red.service.redaction.v1.server.model.drools.RuleUnit;
import com.iqser.red.service.redaction.v1.server.storage.RuleManagementResources;
import lombok.RequiredArgsConstructor;
import lombok.SneakyThrows;
import lombok.extern.slf4j.Slf4j;
@Service
@RequiredArgsConstructor
@Slf4j
public class DroolsSyntaxValidationService {
private static final Pattern allowedImportsPattern = Pattern.compile("^(?:import\\s+static\\s+)?(?:import\\s+)?(?:com\\.knecon\\.fforesight|com\\.iqser\\.red)\\..*;$");
private final KieContainerCreationService kieContainerCreationService;
private final DeprecatedElementsFinder deprecatedElementsFinder;
@SneakyThrows
public DroolsSyntaxValidation testRules(RuleValidationModel rules) {
DroolsSyntaxValidation customDroolsSyntaxValidation = buildCustomDroolsSyntaxValidation(rules.getRulesString(), RuleFileType.valueOf(rules.getRuleFileType()));
DroolsSyntaxValidation customDroolsSyntaxValidation;
try {
customDroolsSyntaxValidation = buildCustomDroolsSyntaxValidation(rules.getRulesString(), RuleFileType.valueOf(rules.getRuleFileType()));
} catch (DroolsParserException e) {
// this means the parser could not parse the file at all. In this case use drools compiler only as it will return useful error messages.
customDroolsSyntaxValidation = new DroolsSyntaxValidation();
}
DroolsSyntaxValidation droolsCompilerSyntaxValidation = buildDroolsCompilerSyntaxValidation(rules);
droolsCompilerSyntaxValidation.getDroolsSyntaxErrorMessages().addAll(customDroolsSyntaxValidation.getDroolsSyntaxErrorMessages());
droolsCompilerSyntaxValidation.getDroolsSyntaxDeprecatedWarnings().addAll(customDroolsSyntaxValidation.getDroolsSyntaxDeprecatedWarnings());
return droolsCompilerSyntaxValidation;
}
private DroolsSyntaxDeprecatedWarnings getWarningsForDeprecatedImports(RuleFileBluePrint ruleFileBluePrint) {
private DroolsSyntaxValidation buildCustomDroolsSyntaxValidation(String ruleString, RuleFileType ruleFileType) {
if (!deprecatedElementsFinder.getDeprecatedClasses().isEmpty()) {
String imports = ruleFileBluePrint.getImports();
SearchImplementation classesSearchImplementation = deprecatedElementsFinder.getClassesSearchImplementation();
List<SearchImplementation.MatchPosition> matches = classesSearchImplementation.getMatches(imports);
if (!matches.isEmpty()) {
String sb = "Following imports are deprecated: \n" + matches.stream()
.map(m -> imports.substring(m.startIndex(), m.endIndex()))
.collect(Collectors.joining("\n"));
return DroolsSyntaxDeprecatedWarnings.builder().line(ruleFileBluePrint.getImportLine()).column(0).message(sb)
.build();
}
}
return null;
}
private List<DroolsSyntaxDeprecatedWarnings> getWarningsForDeprecatedRules(RuleFileBluePrint ruleFileBluePrint) {
List<DroolsSyntaxDeprecatedWarnings> warningMessages = new ArrayList<>();
// checks the rules for deprecateMethods
if (!deprecatedElementsFinder.getDeprecatedMethods().isEmpty()) {
SearchImplementation methodsSearchImplementation = deprecatedElementsFinder.getMethodsSearchImplementation();
Map<String, String> deprecatedMethodsSignatureMap = deprecatedElementsFinder.getDeprecatedMethodsSignaturesMap();
for (RuleClass ruleClass : ruleFileBluePrint.getRuleClasses()) {
for (RuleUnit ruleUnit : ruleClass.ruleUnits()) {
for (BasicRule basicRule : ruleUnit.rules()) {
List<SearchImplementation.MatchPosition> matches = methodsSearchImplementation.getMatches(basicRule.getCode());
if (!matches.isEmpty()) {
String warningMessage = matches.stream()
.map(m -> basicRule.getCode().substring(m.startIndex(), m.endIndex()))
.distinct()
.map(dm -> String.format("Method %s might be deprecated because of \n %s \n", dm, deprecatedMethodsSignatureMap.get(dm)))
.collect(Collectors.joining("\n"));
warningMessages.add(DroolsSyntaxDeprecatedWarnings.builder().line(basicRule.getLine()).column(0).message(warningMessage)
.build());
}
}
}
}
}
return warningMessages.stream()
.sorted(Comparator.comparingInt(DroolsSyntaxDeprecatedWarnings::getLine))
.collect(Collectors.toList());
}
private DroolsSyntaxValidation buildCustomDroolsSyntaxValidation(String ruleString, RuleFileType ruleFileType) throws DroolsParserException {
RuleFileBluePrint ruleFileBluePrint = RuleFileParser.buildBluePrintFromRulesString(ruleString);
DroolsSyntaxValidation customSyntaxValidation = ruleFileBluePrint.getDroolsSyntaxValidation();
// find deprecated elements in the ruleFileBluePrint
DroolsSyntaxDeprecatedWarnings warningMessageForImports = getWarningsForDeprecatedImports(ruleFileBluePrint);
if (warningMessageForImports != null) {
customSyntaxValidation.getDroolsSyntaxDeprecatedWarnings().add(warningMessageForImports);
}
customSyntaxValidation.getDroolsSyntaxDeprecatedWarnings().addAll(getWarningsForDeprecatedRules(ruleFileBluePrint));
RuleFileBluePrint baseRuleFileBluePrint = switch (ruleFileType) {
case ENTITY -> RuleFileParser.buildBluePrintFromRulesString(RuleManagementResources.getBaseRuleFileString());
case COMPONENT -> RuleFileParser.buildBluePrintFromRulesString(RuleManagementResources.getBaseComponentRuleFileString());
};
if (!ruleFileBluePrint.getImports().equals(baseRuleFileBluePrint.getImports())) {
if (!importsAreValid(baseRuleFileBluePrint, ruleFileBluePrint)) {
customSyntaxValidation.getDroolsSyntaxErrorMessages()
.add(DroolsSyntaxErrorMessage.builder()
.line(ruleFileBluePrint.getImportLine())
.column(0)
.message(String.format("Changing the imports is not allowed! Must be: %n%s", baseRuleFileBluePrint.getImports()))
.build());
.line(ruleFileBluePrint.getImportLine())
.column(0)
.message(String.format("Changing the imports is not allowed! Must be: %n%s", baseRuleFileBluePrint.getImports()))
.build());
}
if (!ruleFileBluePrint.getGlobals().equals(baseRuleFileBluePrint.getGlobals())) {
customSyntaxValidation.getDroolsSyntaxErrorMessages()
.add(DroolsSyntaxErrorMessage.builder().line(ruleFileBluePrint.getGlobalsLine())
.column(0).message(String.format("Changing the globals is not allowed! Must be: %n%s", baseRuleFileBluePrint.getGlobals()))
.build());
.add(DroolsSyntaxErrorMessage.builder()
.line(ruleFileBluePrint.getGlobalsLine())
.column(0)
.message(String.format("Changing the globals is not allowed! Must be: %n%s", baseRuleFileBluePrint.getGlobals()))
.build());
}
baseRuleFileBluePrint.getQueries().forEach(basicQuery -> {
if (!validateQueryIsPresent(basicQuery, ruleFileBluePrint)) {
baseRuleFileBluePrint.getQueries()
.forEach(basicQuery -> {
if (!validateQueryIsPresent(basicQuery, ruleFileBluePrint)) {
customSyntaxValidation.getDroolsSyntaxErrorMessages()
.add(DroolsSyntaxErrorMessage.builder()
.line(basicQuery.getLine())
.column(0)
.message(String.format("Changing or removing the query %s is not allowed! Must be: %n%s", basicQuery.getName(), basicQuery.getCode()))
.build());
}
});
if (ruleFileType.equals(RuleFileType.ENTITY)) {
String requiredAgendaGroup = "LOCAL_DICTIONARY_ADDS";
if (!validateAgendaGroupIsPresent(ruleFileBluePrint, requiredAgendaGroup)) {
customSyntaxValidation.getDroolsSyntaxErrorMessages()
.add(DroolsSyntaxErrorMessage.builder()
.line(basicQuery.getLine())
.column(0)
.message(String.format("Changing or removing the query %s is not allowed! Must be: %n%s", basicQuery.getName(), basicQuery.getCode()))
.build());
.add(DroolsSyntaxErrorMessage.builder().line(0).column(0).message(String.format("At least one rule with Agenda-Group '%s' required!", requiredAgendaGroup))
.build());
}
});
baseRuleFileBluePrint.streamAllRules().forEach(basicRule -> {
if (!validateRuleIsPresent(basicRule, ruleFileBluePrint)) {
customSyntaxValidation.getDroolsSyntaxErrorMessages()
.add(DroolsSyntaxErrorMessage.builder()
.line(basicRule.getLine())
.column(0)
.message(String.format("Changing or removing the rule %s is not allowed! Must be: %n%s", basicRule.getName(), basicRule.getCode()))
.build());
}
});
}
return customSyntaxValidation;
}
private static boolean validateRuleIsPresent(BasicRule basicRule, RuleFileBluePrint ruleFileBluePrint) {
private boolean validateAgendaGroupIsPresent(RuleFileBluePrint ruleFileBluePrint, String agendaGroupName) {
return ruleFileBluePrint.findRulesByIdentifier(basicRule.getIdentifier()).stream().anyMatch(otherRule -> otherRule.getCode().equals(basicRule.getCode()));
return ruleFileBluePrint.streamAllRules()
.anyMatch(basicRule -> basicRule.getAgendaGroup().equals(agendaGroupName));
}
private boolean importsAreValid(RuleFileBluePrint baseRuleFileBluePrint, RuleFileBluePrint ruleFileBluePrint) {
// imports may shrink, but not add anything new!
Set<String> baseImports = baseRuleFileBluePrint.getImportSplitByKeyword();
Set<String> imports = ruleFileBluePrint.getImportSplitByKeyword();
Set<String> additionalImports = Sets.difference(imports, baseImports);
return additionalImports.stream()
.allMatch(additionalImport -> allowedImportsPattern.matcher(additionalImport).matches());
}
private static boolean validateQueryIsPresent(BasicQuery queryToCheckFor, RuleFileBluePrint ruleFileBluePrint) {
return ruleFileBluePrint.getQueries().stream().anyMatch(query -> query.getName().equals(queryToCheckFor.getName()) && query.getCode().equals(queryToCheckFor.getCode()));
return ruleFileBluePrint.getQueries()
.stream()
.anyMatch(query -> query.getName().equals(queryToCheckFor.getName()) && query.getCode().equals(queryToCheckFor.getCode()));
}
@@ -101,7 +201,9 @@ public class DroolsSyntaxValidationService {
var versionId = System.currentTimeMillis();
var testRules = "test-rules";
KieBuilder kieBuilder = kieContainerCreationService.registerNewKieContainerVersion(testRules,
versionId, rules.getRulesString(), RuleFileType.valueOf(rules.getRuleFileType()));
versionId,
rules.getRulesString(),
RuleFileType.valueOf(rules.getRuleFileType()));
return buildDroolsCompilerSyntaxValidation(kieBuilder);
}
@@ -109,14 +211,18 @@ public class DroolsSyntaxValidationService {
private DroolsSyntaxValidation buildDroolsCompilerSyntaxValidation(KieBuilder kieBuilder) {
List<Message> errorMessages = kieBuilder.getResults().getMessages(Message.Level.ERROR);
List<DroolsSyntaxErrorMessage> droolsSyntaxErrorMessages = errorMessages.stream().map(this::buildDroolsSyntaxErrorMessage).collect(Collectors.toList());
return DroolsSyntaxValidation.builder().droolsSyntaxErrorMessages(droolsSyntaxErrorMessages).build();
List<DroolsSyntaxErrorMessage> droolsSyntaxErrorMessages = errorMessages.stream()
.map(this::buildDroolsSyntaxErrorMessage)
.collect(Collectors.toList());
return DroolsSyntaxValidation.builder().droolsSyntaxErrorMessages(droolsSyntaxErrorMessages)
.build();
}
private DroolsSyntaxErrorMessage buildDroolsSyntaxErrorMessage(Message message) {
return DroolsSyntaxErrorMessage.builder().line(message.getLine()).column(message.getColumn()).message(message.getText()).build();
return DroolsSyntaxErrorMessage.builder().line(message.getLine()).column(message.getColumn()).message(message.getText())
.build();
}
}
@@ -7,8 +7,6 @@ import java.util.concurrent.ExecutionException;
import java.util.concurrent.TimeUnit;
import java.util.concurrent.TimeoutException;
import com.iqser.red.service.persistence.service.v1.api.shared.model.RuleFileType;
import com.iqser.red.service.redaction.v1.server.utils.exception.DroolsTimeoutException;
import org.kie.api.runtime.KieContainer;
import org.kie.api.runtime.KieSession;
import org.kie.api.runtime.rule.QueryResults;
@@ -16,7 +14,9 @@ import org.kie.api.runtime.rule.QueryResultsRow;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.FileAttribute;
import com.iqser.red.service.persistence.service.v1.api.shared.model.RuleFileType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.entitymapped.BaseAnnotation;
import com.iqser.red.service.redaction.v1.server.RedactionServiceSettings;
import com.iqser.red.service.redaction.v1.server.model.NerEntities;
import com.iqser.red.service.redaction.v1.server.model.dictionary.Dictionary;
@@ -25,8 +25,11 @@ import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNo
import com.iqser.red.service.redaction.v1.server.service.ManualChangesApplicationService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityCreationService;
import com.iqser.red.service.redaction.v1.server.service.document.EntityEnrichmentService;
import com.iqser.red.service.redaction.v1.server.utils.exception.DroolsTimeoutException;
import io.micrometer.core.annotation.Timed;
import io.micrometer.observation.ObservationRegistry;
import io.micrometer.observation.annotation.Observed;
import lombok.AccessLevel;
import lombok.RequiredArgsConstructor;
import lombok.experimental.FieldDefaults;
@@ -39,11 +42,13 @@ import lombok.extern.slf4j.Slf4j;
public class EntityDroolsExecutionService {
EntityEnrichmentService entityEnrichmentService;
ObservationRegistry observationRegistry;
ManualChangesApplicationService manualChangesApplicationService;
RedactionServiceSettings settings;
@Timed("redactmanager_executeRules")
@Observed(name = "EntityDroolsExecutionService", contextualName = "execute-entity-rules")
public List<FileAttribute> executeRules(KieContainer kieContainer,
Document document,
Dictionary dictionary,
@@ -51,11 +56,19 @@ public class EntityDroolsExecutionService {
ManualRedactions manualRedactions,
NerEntities nerEntities) {
return executeRules(kieContainer, document, document.streamChildren().toList(), dictionary, fileAttributes, manualRedactions, nerEntities);
return executeRules(kieContainer,
document,
document.streamChildren()
.toList(),
dictionary,
fileAttributes,
manualRedactions,
nerEntities);
}
@Timed("redactmanager_executeRules")
@Observed(name = "EntityDroolsExecutionService", contextualName = "execute-entity-rules")
public List<FileAttribute> executeRules(KieContainer kieContainer,
Document document,
List<SemanticNode> sectionsToAnalyze,
@@ -64,9 +77,10 @@ public class EntityDroolsExecutionService {
ManualRedactions manualRedactions,
NerEntities nerEntities) {
addNumberOfPagesAndSectionsToAnalyseToTrace(document.getNumberOfPages(), sectionsToAnalyze.size());
KieSession kieSession = kieContainer.newKieSession();
EntityCreationService entityCreationService = new EntityCreationService(entityEnrichmentService, kieSession);
ManualChangesApplicationService manualChangesApplicationService = new ManualChangesApplicationService(entityCreationService);
kieSession.setGlobal("document", document);
kieSession.setGlobal("entityCreationService", entityCreationService);
@@ -74,36 +88,45 @@ public class EntityDroolsExecutionService {
kieSession.setGlobal("dictionary", dictionary);
kieSession.insert(document);
document.getEntities().forEach(kieSession::insert);
document.getEntities()
.forEach(kieSession::insert);
sectionsToAnalyze.forEach(kieSession::insert);
sectionsToAnalyze.stream().flatMap(SemanticNode::streamAllSubNodes).forEach(kieSession::insert);
document.getPages().forEach(kieSession::insert);
fileAttributes.stream().filter(f -> f.getValue() != null).forEach(kieSession::insert);
sectionsToAnalyze.stream()
.flatMap(SemanticNode::streamAllSubNodes)
.forEach(kieSession::insert);
document.getPages()
.forEach(kieSession::insert);
fileAttributes.stream()
.filter(f -> f.getValue() != null)
.forEach(kieSession::insert);
if (manualRedactions != null) {
manualRedactions.getResizeRedactions().forEach(kieSession::insert);
manualRedactions.getRecategorizations().forEach(kieSession::insert);
manualRedactions.getEntriesToAdd().forEach(kieSession::insert);
manualRedactions.getForceRedactions().forEach(kieSession::insert);
manualRedactions.getIdsToRemove().forEach(kieSession::insert);
manualRedactions.getLegalBasisChanges().forEach(kieSession::insert);
manualRedactions.buildAll()
.stream()
.filter(BaseAnnotation::isLocal)
.forEach(kieSession::insert);
}
kieSession.insert(nerEntities);
kieSession.getAgenda().getAgendaGroup("LOCAL_DICTIONARY_ADDS").setFocus();
CompletableFuture<Void> completableFuture = CompletableFuture.supplyAsync(() -> {
kieSession.fireAllRules();
return null;
});
try {
completableFuture.orTimeout(settings.getDroolsExecutionTimeoutSecs(), TimeUnit.SECONDS).get();
completableFuture.orTimeout(settings.getDroolsExecutionTimeoutSecs(), TimeUnit.SECONDS)
.get();
} catch (ExecutionException e) {
kieSession.dispose();
if(e.getCause() instanceof TimeoutException){
if (e.getCause() instanceof TimeoutException) {
throw new DroolsTimeoutException(e, false, RuleFileType.ENTITY);
}
throw new RuntimeException(e);
@@ -128,4 +151,13 @@ public class EntityDroolsExecutionService {
return fileAttributes;
}
private void addNumberOfPagesAndSectionsToAnalyseToTrace(int numberOfPages, int sectionsToAnalyse) {
if (observationRegistry.getCurrentObservation() != null) {
observationRegistry.getCurrentObservation().highCardinalityKeyValue("numberOfPages", String.valueOf(numberOfPages));
observationRegistry.getCurrentObservation().highCardinalityKeyValue("sectionsToAnalyse", String.valueOf(sectionsToAnalyse));
}
}
}
@@ -20,6 +20,7 @@ import com.iqser.red.service.redaction.v1.server.utils.exception.DroolsTimeoutEx
import com.knecon.fforesight.tenantcommons.TenantContext;
import feign.FeignException;
import io.micrometer.observation.annotation.Observed;
import lombok.RequiredArgsConstructor;
@Service
@@ -29,6 +30,8 @@ public class KieContainerCreationService {
private final RulesClient rulesClient;
@Observed(name = "KieContainerCreationService",
contextualName = "get-kie-container")
public KieWrapper getLatestKieContainer(String dossierTemplateId, RuleFileType ruleFileType) {
try {
@@ -0,0 +1,22 @@
package com.iqser.red.service.redaction.v1.server.storage;
import org.springframework.stereotype.Service;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentData;
import io.micrometer.observation.annotation.Observed;
import lombok.RequiredArgsConstructor;
@Service
@RequiredArgsConstructor
public class ObservedStorageService {
private final RedactionStorageService redactionStorageService;
@Observed(name = "RedactionStorageService", contextualName = "get-document-data")
public DocumentData getDocumentData(String dossierId, String fileId) {
return redactionStorageService.getDocumentData(dossierId, fileId);
}
}
@@ -3,18 +3,21 @@ package com.iqser.red.service.redaction.v1.server.storage;
import java.io.File;
import java.io.FileInputStream;
import java.io.InputStream;
import java.util.List;
import java.util.stream.Collectors;
import org.springframework.cache.annotation.Cacheable;
import org.springframework.stereotype.Service;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.componentlog.ComponentLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.EntityLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.imported.ImportedRedactionsPerPage;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.dossier.file.FileType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.RedactionLog;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.imported.ImportedRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.section.SectionGrid;
import com.iqser.red.service.redaction.v1.server.client.model.NerEntitiesModel;
import com.iqser.red.service.redaction.v1.server.utils.exception.NotFoundException;
import com.iqser.red.service.redaction.v1.server.model.document.DocumentData;
import com.iqser.red.service.redaction.v1.server.utils.exception.NotFoundException;
import com.iqser.red.storage.commons.exception.StorageObjectDoesNotExist;
import com.iqser.red.storage.commons.service.StorageService;
import com.knecon.fforesight.service.layoutparser.internal.api.data.redaction.DocumentPage;
@@ -75,10 +78,26 @@ public class RedactionStorageService {
@Timed("redactmanager_getImportedRedactions")
public ImportedRedactions getImportedRedactions(String dossierId, String fileId) {
try {
ImportedRedactionsPerPage importedRedactionsPerPage = storageService.readJSONObject(TenantContext.getTenantId(),
StorageIdUtils.getStorageId(dossierId, fileId, FileType.IMPORTED_REDACTIONS),
ImportedRedactionsPerPage.class);
return new ImportedRedactions(importedRedactionsPerPage.getImportedRedactions().values().stream().flatMap(List::stream).collect(Collectors.toList()));
} catch (StorageObjectDoesNotExist e) {
log.debug("Imported redactions not available.");
return new ImportedRedactions();
}
}
@Timed("redactmanager_getImportedRedactions")
public ImportedRedactionsPerPage getImportedRedactionsPerPage(String dossierId, String fileId) {
try {
return storageService.readJSONObject(TenantContext.getTenantId(),
StorageIdUtils.getStorageId(dossierId, fileId, FileType.IMPORTED_REDACTIONS),
ImportedRedactions.class);
ImportedRedactionsPerPage.class);
} catch (StorageObjectDoesNotExist e) {
log.debug("Imported redactions not available.");
return null;
@@ -86,11 +105,19 @@ public class RedactionStorageService {
}
@Deprecated(forRemoval = true)
@Timed("redactmanager_getRedactionLog")
public RedactionLog getRedactionLog(String dossierId, String fileId) {
try {
return storageService.readJSONObject(TenantContext.getTenantId(), StorageIdUtils.getStorageId(dossierId, fileId, FileType.REDACTION_LOG), RedactionLog.class);
RedactionLog redactionLog = storageService.readJSONObject(TenantContext.getTenantId(),
StorageIdUtils.getStorageId(dossierId, fileId, FileType.REDACTION_LOG),
RedactionLog.class);
redactionLog.setRedactionLogEntry(redactionLog.getRedactionLogEntry()
.stream()
.filter(entry -> !(entry.getPositions() == null || entry.getPositions().isEmpty()))
.collect(Collectors.toList()));
return redactionLog;
} catch (StorageObjectDoesNotExist e) {
log.debug("RedactionLog not available.");
return null;
@@ -98,28 +125,48 @@ public class RedactionStorageService {
}
@Timed("redactmanager_getRedactionLog")
public EntityLog getEntityLog(String dossierId, String fileId) {
try {
return storageService.readJSONObject(TenantContext.getTenantId(), StorageIdUtils.getStorageId(dossierId, fileId, FileType.ENTITY_LOG), EntityLog.class);
EntityLog entityLog = storageService.readJSONObject(TenantContext.getTenantId(), StorageIdUtils.getStorageId(dossierId, fileId, FileType.ENTITY_LOG), EntityLog.class);
entityLog.setEntityLogEntry(entityLog.getEntityLogEntry()
.stream()
.filter(entry -> !(entry.getPositions() == null || entry.getPositions().isEmpty()))
.collect(Collectors.toList()));
return entityLog;
} catch (StorageObjectDoesNotExist e) {
log.debug("RedactionLog not available.");
log.debug("EntityLog not available.");
return null;
}
}
// !Warning! before activating redis cache you need to set
// -Dio.netty.noPreferDirect=true -XX:MaxDirectMemorySize=1000M
// Jvm args to the largest document data size we want to process. for 4443 pages file that was 500mb.
// And the cache eviction logic when a file changes after e.g. ocr is not implemented yet.
// See https://knecon.atlassian.net/jira/software/c/projects/RED/boards/37?selectedIssue=RED-8106.
@Timed("redactmanager_getDocumentGraph")
@Cacheable(value = "documentDataCache")
public DocumentData getDocumentData(String dossierId, String fileId) {
try {
return DocumentData.builder()
.documentStructure(storageService.readJSONObject(TenantContext.getTenantId(), StorageIdUtils.getStorageId(dossierId, fileId, FileType.DOCUMENT_STRUCTURE), DocumentStructure.class))
.documentTextData(storageService.readJSONObject(TenantContext.getTenantId(), StorageIdUtils.getStorageId(dossierId, fileId, FileType.DOCUMENT_TEXT), DocumentTextData[].class))
.documentPositionData(storageService.readJSONObject(TenantContext.getTenantId(), StorageIdUtils.getStorageId(dossierId, fileId, FileType.DOCUMENT_POSITION), DocumentPositionData[].class))
.documentPages(storageService.readJSONObject(TenantContext.getTenantId(), StorageIdUtils.getStorageId(dossierId, fileId, FileType.DOCUMENT_PAGES), DocumentPage[].class))
.documentStructure(storageService.readJSONObject(TenantContext.getTenantId(),
StorageIdUtils.getStorageId(dossierId, fileId, FileType.DOCUMENT_STRUCTURE),
DocumentStructure.class))
.documentTextData(storageService.readJSONObject(TenantContext.getTenantId(),
StorageIdUtils.getStorageId(dossierId, fileId, FileType.DOCUMENT_TEXT),
DocumentTextData[].class))
.documentPositionData(storageService.readJSONObject(TenantContext.getTenantId(),
StorageIdUtils.getStorageId(dossierId, fileId, FileType.DOCUMENT_POSITION),
DocumentPositionData[].class))
.documentPages(storageService.readJSONObject(TenantContext.getTenantId(),
StorageIdUtils.getStorageId(dossierId, fileId, FileType.DOCUMENT_PAGES),
DocumentPage[].class))
.build();
} catch (StorageObjectDoesNotExist e) {
log.debug("DocumentData not available.");
@@ -139,17 +186,6 @@ public class RedactionStorageService {
}
@Timed("redactmanager_getSectionGrid")
public SectionGrid getSectionGrid(String dossierId, String fileId) {
try {
return storageService.readJSONObject(TenantContext.getTenantId(), StorageIdUtils.getStorageId(dossierId, fileId, FileType.SECTION_GRID), SectionGrid.class);
} catch (StorageObjectDoesNotExist e) {
throw new NotFoundException("Section Grid is not available.");
}
}
public ComponentLog getComponentLog(String dossierId, String fileId) {
try {
@@ -160,6 +196,12 @@ public class RedactionStorageService {
}
public boolean entityLogExists(String dossierId, String fileId) {
return storageService.objectExists(TenantContext.getTenantId(), StorageIdUtils.getStorageId(dossierId, fileId, FileType.ENTITY_LOG));
}
@RequiredArgsConstructor
public enum StorageType {
PARSED_DOCUMENT(".json");
@@ -0,0 +1,55 @@
package com.iqser.red.service.redaction.v1.server.utils;
import java.util.Collections;
import java.util.LinkedList;
import java.util.Set;
import java.util.function.BiConsumer;
import java.util.function.BinaryOperator;
import java.util.function.Function;
import java.util.function.Supplier;
import java.util.stream.Collector;
import com.google.common.base.Functions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.migration.MigratedIds;
import com.iqser.red.service.redaction.v1.server.model.MigrationEntity;
public class MigratedIdsCollector implements Collector<MigrationEntity, MigratedIds, MigratedIds> {
@Override
public Supplier<MigratedIds> supplier() {
return () -> new MigratedIds(new LinkedList<>(), Collections.emptyList());
}
@Override
public BiConsumer<MigratedIds, MigrationEntity> accumulator() {
return (migratedIds, migrationEntity) -> migratedIds.addMapping(migrationEntity.getOldId(), migrationEntity.getNewId());
}
@Override
public BinaryOperator<MigratedIds> combiner() {
return (migratedIds, migratedIds2) -> {
migratedIds.getMappings().addAll(migratedIds2.getMappings());
return migratedIds;
};
}
@Override
public Function<MigratedIds, MigratedIds> finisher() {
return Functions.identity();
}
@Override
public Set<Characteristics> characteristics() {
return Set.of(Characteristics.IDENTITY_FINISH, Characteristics.CONCURRENT, Characteristics.UNORDERED);
}
}
@@ -11,8 +11,7 @@ public final class Patterns {
public static final Map<String, Pattern> patternCache = new HashMap<>();
public static final Pattern AUTHOR_TABLE_SPLITTER = Pattern.compile(
"(((((di)|(van)) )|[A-Z]’)?[A-ZÄÖÜ][\\wäöüéèê]{2,500}( ?[A-ZÄÖÜ]{1,2}\\.){1,3})|(((((di)|(van)) )|[A-Z]’)?[A-ZÄÖÜ][\\wäöüéèê]{2,500}( ?[A-ZÄÖÜ]{1,2} ){1,3})");
public static final Pattern AUTHOR_NAME_PATTERN = Pattern.compile("^(?!\\w*[.]$)\\p{Lu}\\p{L}*[.\\p{L}\\s]*$");
public Pattern getCompiledPattern(String pattern, boolean caseInsensitive) {
@@ -12,7 +12,7 @@ import java.util.function.Function;
import java.util.function.Supplier;
import java.util.stream.Collector;
import com.iqser.red.service.persistence.service.v1.api.shared.model.redactionlog.Rectangle;
import com.iqser.red.service.persistence.service.v1.api.shared.model.analysislog.entitylog.Position;
import com.iqser.red.service.redaction.v1.server.model.document.textblock.AtomicTextBlock;
import lombok.AllArgsConstructor;
@@ -26,18 +26,9 @@ public class RectangleTransformations {
}
public static Rectangle2D rectangleBBox(List<Rectangle> rectangles) {
public static Rectangle2D rectangleBBox(List<Position> positions) {
return rectangles.stream().map(RectangleTransformations::toRectangle2D).collect(new Rectangle2DBBoxCollector());
}
public static Rectangle2D toRectangle2D(Rectangle redactionLogRectangle) {
return new Rectangle2D.Double(redactionLogRectangle.getTopLeft().getX(),
redactionLogRectangle.getTopLeft().getY() + redactionLogRectangle.getHeight(),
redactionLogRectangle.getWidth(),
-redactionLogRectangle.getHeight());
return positions.stream().map(Position::toRectangle2D).collect(new Rectangle2DBBoxCollector());
}
@@ -79,6 +70,12 @@ public class RectangleTransformations {
}
public static Collector<Rectangle2D, Rectangle2DBBoxCollector.BBox, Rectangle2D> collectBBox() {
return new Rectangle2DBBoxCollector();
}
private static class Rectangle2DBBoxCollector implements Collector<Rectangle2D, Rectangle2DBBoxCollector.BBox, Rectangle2D> {
@Override
@@ -132,6 +132,12 @@ public class RedactionSearchUtility {
return getTextRangesByPatternWithLineBreaks(textBlock, group, pattern);
}
public static List<TextRange> findTextRangesByRegexIgnoreCase(String regexPattern, TextBlock textBlock) {
Pattern pattern = Patterns.getCompiledPattern(regexPattern, true);
return getTextRangesByPattern(textBlock, 0, pattern);
}
public static List<TextRange> findTextRangesByRegexIgnoreCase(String regexPattern, int group, TextBlock textBlock) {
@@ -1,5 +1,5 @@
server:
port: 8083
port: 8077
persistence-service.url: "http://localhost:8085"
tenant-user-management-service.url: "http://localhost:8091/internal"
@@ -7,10 +7,18 @@ entity-recognition-service.url: "http://entity-recognition-service-v1:8080"
tenant-user-management-service.url: "http://tenant-user-management-service:8080/internal"
fforesight.tenants.remote: true
logging.pattern.level: "%5p [${spring.application.name},%X{traceId:-},%X{spanId:-}]"
logging.type: ${LOGGING_TYPE:CONSOLE}
kubernetes.namespace: ${NAMESPACE:default}
project.version: 1.0-SNAPSHOT
server:
port: 8080
spring:
application:
name: redaction-service
main:
allow-circular-references: true # FIXME
profiles:
@@ -29,6 +37,15 @@ spring:
max-attempts: 3
max-interval: 15000
prefetch: 1
cache:
type: NONE
data:
redis:
database: 0
host: ${REDIS_HOST:localhost}
port: ${REDIS_PORT:6379}
password: ${REDIS_PASSWORD}
timeout: 60000
management:
endpoint:
@@ -37,6 +54,13 @@ management:
health.enabled: true
endpoints.web.exposure.include: prometheus, health
metrics.export.prometheus.enabled: ${monitoring.enabled:false}
tracing:
enabled: ${TRACING_ENABLED:false}
sampling:
probability: ${TRACING_PROBABILITY:1.0}
otlp:
tracing:
endpoint: ${OTLP_ENDPOINT:http://otel-collector-opentelemetry-collector.otel-collector:4318/v1/traces}
storage:
@@ -22,6 +22,7 @@ import com.iqser.red.service.redaction.v1.server.model.document.entity.MatchedRu
import com.iqser.red.service.redaction.v1.server.model.document.nodes.*;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Section;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Table;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.TableCell;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.SemanticNode;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Document;
import com.iqser.red.service.redaction.v1.server.model.document.nodes.Paragraph;
@@ -73,7 +74,7 @@ query "getFileAttributes"
//------------------------------------ Local dictionary search rules ------------------------------------
// Rule unit: LocalDictionarySearch.0
rule "LDS.0.0: run local dictionary search"
rule "LDS.0.0: Run local dictionary search"
agenda-group "LOCAL_DICTIONARY_ADDS"
salience -999
when
@@ -0,0 +1,17 @@
<configuration>
<springProperty scope="configuration" name="logType" source="logging.type"/>
<springProperty scope="context" name="application.name" source="spring.application.name"/>
<springProperty scope="context" name="version" source="project.version"/>
<include resource="org/springframework/boot/logging/logback/defaults.xml"/>
<include resource="org/springframework/boot/logging/logback/console-appender.xml"/>
<appender name="JSON" class="ch.qos.logback.core.ConsoleAppender">
<encoder class="net.logstash.logback.encoder.LogstashEncoder"/>
</appender>
<root level="INFO">
<appender-ref ref="${logType}"/>
</root>
</configuration>
@@ -1,8 +1,32 @@
package com.iqser.red.service.redaction.v1.server;
import static org.mockito.Mockito.when;
import java.io.File;
import java.io.InputStream;
import java.net.URL;
import java.nio.file.Files;
import java.time.OffsetDateTime;
import java.util.ArrayList;
import java.util.Collections;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.stream.Collectors;
import org.junit.jupiter.api.AfterEach;
import org.mockito.stubbing.Answer;
import org.springframework.amqp.rabbit.core.RabbitTemplate;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.boot.test.mock.mockito.MockBean;
import org.springframework.core.io.ClassPathResource;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.iqser.red.service.dictionarymerge.commons.DictionaryEntry;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.annotations.ManualRedactions;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.configuration.Colors;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.dossier.file.FileType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.type.Type;
@@ -12,33 +36,20 @@ import com.iqser.red.service.redaction.v1.server.client.LegalBasisClient;
import com.iqser.red.service.redaction.v1.server.client.RulesClient;
import com.iqser.red.service.redaction.v1.server.controller.RedactionController;
import com.iqser.red.service.redaction.v1.server.service.AnalyzeService;
import com.iqser.red.service.redaction.v1.server.utils.ResourceLoader;
import com.iqser.red.service.redaction.v1.server.utils.TextNormalizationUtilities;
import com.iqser.red.service.redaction.v1.server.service.UnprocessedChangesService;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import com.iqser.red.service.redaction.v1.server.utils.LayoutParsingRequestProvider;
import com.iqser.red.service.redaction.v1.server.utils.ResourceLoader;
import com.iqser.red.service.redaction.v1.server.utils.TextNormalizationUtilities;
import com.iqser.red.storage.commons.service.StorageService;
import com.iqser.red.storage.commons.utils.FileSystemBackedStorageService;
import com.knecon.fforesight.service.layoutparser.internal.api.queue.LayoutParsingFinishedEvent;
import com.knecon.fforesight.service.layoutparser.internal.api.queue.LayoutParsingType;
import com.knecon.fforesight.service.layoutparser.processor.LayoutParsingPipeline;
import com.knecon.fforesight.tenantcommons.TenantContext;
import com.knecon.fforesight.tenantcommons.TenantsClient;
import lombok.SneakyThrows;
import org.junit.jupiter.api.AfterEach;
import org.mockito.stubbing.Answer;
import org.springframework.amqp.rabbit.core.RabbitTemplate;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.boot.test.mock.mockito.MockBean;
import org.springframework.core.io.ClassPathResource;
import java.io.File;
import java.io.InputStream;
import java.net.URL;
import java.nio.file.Files;
import java.time.OffsetDateTime;
import java.util.*;
import java.util.stream.Collectors;
import static org.mockito.Mockito.when;
public abstract class AbstractRedactionIntegrationTest {
@@ -106,6 +117,9 @@ public abstract class AbstractRedactionIntegrationTest {
@Autowired
private LayoutParsingPipeline layoutParsingPipeline;
@Autowired
protected UnprocessedChangesService unprocessedChangesService;
@MockBean
protected RabbitTemplate rabbitTemplate;
@@ -431,7 +445,6 @@ public abstract class AbstractRedactionIntegrationTest {
@SneakyThrows
protected LayoutParsingFinishedEvent analyzeDocumentStructure(LayoutParsingType layoutParsingType, AnalyzeRequest request) {
return layoutParsingPipeline.parseLayoutAndSaveFilesToStorage(LayoutParsingRequestProvider.build(layoutParsingType, request));
}
@@ -462,6 +475,7 @@ public abstract class AbstractRedactionIntegrationTest {
.dossierId(TEST_DOSSIER_ID)
.fileId(TEST_FILE_ID)
.lastProcessed(OffsetDateTime.now())
.manualRedactions(ManualRedactions.builder().build())
.build();
storageService.storeObject(TenantContext.getTenantId(), RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.ORIGIN), fileStream);
@@ -0,0 +1,122 @@
package com.iqser.red.service.redaction.v1.server;
import static org.mockito.Mockito.when;
import java.io.FileNotFoundException;
import java.io.FileOutputStream;
import java.io.IOException;
import java.util.List;
import org.junit.jupiter.api.BeforeEach;
import org.junit.jupiter.api.Disabled;
import org.junit.jupiter.api.Test;
import org.junit.jupiter.api.extension.ExtendWith;
import org.springframework.boot.autoconfigure.EnableAutoConfiguration;
import org.springframework.boot.autoconfigure.amqp.RabbitAutoConfiguration;
import org.springframework.boot.test.context.SpringBootTest;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.ComponentScan;
import org.springframework.context.annotation.Configuration;
import org.springframework.context.annotation.FilterType;
import org.springframework.context.annotation.Import;
import org.springframework.context.annotation.Primary;
import org.springframework.test.context.junit.jupiter.SpringExtension;
import com.iqser.red.commons.jackson.ObjectMapperFactory;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeResult;
import com.iqser.red.service.persistence.service.v1.api.shared.model.RuleFileType;
import com.iqser.red.service.persistence.service.v1.api.shared.model.common.JSONPrimitive;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.type.Type;
import com.iqser.red.service.redaction.v1.server.annotate.AnnotateRequest;
import com.iqser.red.service.redaction.v1.server.annotate.AnnotateResponse;
import com.iqser.red.service.redaction.v1.server.redaction.utils.OsUtils;
import com.iqser.red.storage.commons.StorageAutoConfiguration;
import com.iqser.red.storage.commons.service.StorageService;
import com.iqser.red.storage.commons.utils.FileSystemBackedStorageService;
import com.knecon.fforesight.service.layoutparser.internal.api.queue.LayoutParsingType;
import com.knecon.fforesight.service.layoutparser.processor.LayoutParsingServiceProcessorConfiguration;
import com.knecon.fforesight.tenantcommons.TenantContext;
@ExtendWith(SpringExtension.class)
@SpringBootTest(classes = Application.class, webEnvironment = SpringBootTest.WebEnvironment.RANDOM_PORT, properties = {"application.type=DocuMine"})
@Import(AnalysisTest.RedactionIntegrationTestConfiguration.class)
public class AnalysisTest extends AbstractRedactionIntegrationTest {
private static final String RULES = loadFromClassPath("drools/test_rules.drl");
private static final String COMPONENT_RULES = loadFromClassPath("drools/test_components.drl");
@Test
@Disabled
public void analyzeTableDemoFile() throws IOException {
AnalyzeRequest request = uploadFileToStorage("files/Metolachlor/S-Metolachlor_RAR_01_Volume_1_2018-09-06.pdf");
System.out.println("Start Full integration test");
analyzeDocumentStructure(LayoutParsingType.DOCUMINE, request);
System.out.println("Finished structure analysis");
AnalyzeResult result = analyzeService.analyze(request);
System.out.println("Finished analysis");
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var componentLog = redactionStorageService.getComponentLog(TEST_DOSSIER_ID, TEST_FILE_ID);
AnnotateResponse annotateResponse = annotationService.annotate(AnnotateRequest.builder().dossierId(TEST_DOSSIER_ID).fileId(TEST_FILE_ID).build());
String outputFileName = OsUtils.getTemporaryDirectory() + "/Documine.pdf";
try (FileOutputStream fileOutputStream = new FileOutputStream(outputFileName)) {
fileOutputStream.write(annotateResponse.getDocument());
}
}
@Configuration
@EnableAutoConfiguration(exclude = {RabbitAutoConfiguration.class})
@Import(LayoutParsingServiceProcessorConfiguration.class)
@ComponentScan(excludeFilters = {@ComponentScan.Filter(type = FilterType.ASSIGNABLE_TYPE, value = StorageAutoConfiguration.class)})
static class RedactionIntegrationTestConfiguration {
@Bean
@Primary
public StorageService inmemoryStorage() {
return new FileSystemBackedStorageService(ObjectMapperFactory.create());
}
}
@BeforeEach
public void stubClients() {
TenantContext.setTenantId("documine");
when(rulesClient.getVersion(TEST_DOSSIER_TEMPLATE_ID, RuleFileType.ENTITY)).thenReturn(System.currentTimeMillis());
when(rulesClient.getRules(TEST_DOSSIER_TEMPLATE_ID, RuleFileType.ENTITY)).thenReturn(JSONPrimitive.of(RULES));
when(rulesClient.getVersion(TEST_DOSSIER_TEMPLATE_ID, RuleFileType.COMPONENT)).thenReturn(System.currentTimeMillis());
when(rulesClient.getRules(TEST_DOSSIER_TEMPLATE_ID, RuleFileType.COMPONENT)).thenReturn(JSONPrimitive.of(COMPONENT_RULES));
loadDictionaryForTest();
loadTypeForTest();
loadNerForTest();
when(dictionaryClient.getVersion(TEST_DOSSIER_TEMPLATE_ID)).thenReturn(0L);
when(dictionaryClient.getAllTypesForDossierTemplate(TEST_DOSSIER_TEMPLATE_ID, false)).thenReturn(getTypeResponse());
when(dictionaryClient.getVersion(TEST_DOSSIER_TEMPLATE_ID)).thenReturn(0L);
when(dictionaryClient.getAllTypesForDossier(TEST_DOSSIER_ID, false)).thenReturn(List.of(Type.builder()
.id(DOSSIER_REDACTIONS_INDICATOR + ":" + TEST_DOSSIER_TEMPLATE_ID)
.type(DOSSIER_REDACTIONS_INDICATOR)
.dossierTemplateId(TEST_DOSSIER_ID)
.hexColor("#ffe187")
.isHint(hintTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.isCaseInsensitive(caseInSensitiveMap.get(DOSSIER_REDACTIONS_INDICATOR))
.isRecommendation(recommendationTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.rank(rankTypeMap.get(DOSSIER_REDACTIONS_INDICATOR))
.build()));
mockDictionaryCalls(null);
when(dictionaryClient.getColors(TEST_DOSSIER_TEMPLATE_ID)).thenReturn(colors);
}
}
@@ -28,6 +28,7 @@ import org.springframework.context.annotation.Primary;
import org.springframework.test.context.junit.jupiter.SpringExtension;
import com.google.common.collect.Sets;
import com.iqser.red.commons.jackson.ObjectMapperFactory;
import com.iqser.red.service.dictionarymerge.commons.DictionaryEntry;
import com.iqser.red.service.dictionarymerge.commons.DictionaryEntryModel;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.configuration.Colors;
@@ -36,6 +37,7 @@ import com.iqser.red.service.redaction.v1.server.client.DictionaryClient;
import com.iqser.red.service.redaction.v1.server.model.dictionary.DictionaryVersion;
import com.iqser.red.service.redaction.v1.server.service.DictionaryService;
import com.iqser.red.storage.commons.service.StorageService;
import com.iqser.red.storage.commons.utils.FileSystemBackedStorageService;
import com.knecon.fforesight.tenantcommons.TenantContext;
import com.knecon.fforesight.tenantcommons.TenantsClient;
@@ -67,7 +69,7 @@ public class DictionaryServiceTest {
@Primary
public StorageService inmemoryStorage() {
return new FileSystemBackedStorageService();
return new FileSystemBackedStorageService(ObjectMapperFactory.create());
}
}
@@ -6,6 +6,8 @@ import java.io.FileOutputStream;
import java.io.IOException;
import java.util.List;
import com.iqser.red.service.persistence.service.v1.api.shared.model.dossiertemplate.dossier.file.FileType;
import com.iqser.red.service.redaction.v1.server.storage.RedactionStorageService;
import org.junit.jupiter.api.BeforeEach;
import org.junit.jupiter.api.Disabled;
import org.junit.jupiter.api.Test;
@@ -19,8 +21,10 @@ import org.springframework.context.annotation.Configuration;
import org.springframework.context.annotation.FilterType;
import org.springframework.context.annotation.Import;
import org.springframework.context.annotation.Primary;
import org.springframework.core.io.ClassPathResource;
import org.springframework.test.context.junit.jupiter.SpringExtension;
import com.iqser.red.commons.jackson.ObjectMapperFactory;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeRequest;
import com.iqser.red.service.persistence.service.v1.api.shared.model.AnalyzeResult;
import com.iqser.red.service.persistence.service.v1.api.shared.model.RuleFileType;
@@ -31,6 +35,7 @@ import com.iqser.red.service.redaction.v1.server.annotate.AnnotateResponse;
import com.iqser.red.service.redaction.v1.server.redaction.utils.OsUtils;
import com.iqser.red.storage.commons.StorageAutoConfiguration;
import com.iqser.red.storage.commons.service.StorageService;
import com.iqser.red.storage.commons.utils.FileSystemBackedStorageService;
import com.knecon.fforesight.service.layoutparser.internal.api.queue.LayoutParsingType;
import com.knecon.fforesight.service.layoutparser.processor.LayoutParsingServiceProcessorConfiguration;
import com.knecon.fforesight.tenantcommons.TenantContext;
@@ -48,7 +53,11 @@ public class DocumineFloraTest extends AbstractRedactionIntegrationTest {
// @Disabled
public void titleExtraction() throws IOException {
AnalyzeRequest request = uploadFileToStorage("files/Documine/Flora/A8591B/15-Curacron_ToxicidadeAgudaOral.pdf");
AnalyzeRequest request = uploadFileToStorage("files/ImportedRedactions/18 Chlorothalonil RAR 08 Volume 3CA B 6a Oct 2017.pdf");
ClassPathResource importedRedactionClasspathResource = new ClassPathResource("files/ImportedRedactions/18 Chlorothalonil RAR 08 Volume 3CA B 6a Oct 2017.IMPORTED_REDACTIONS.json");
storageService.storeObject(TenantContext.getTenantId(), RedactionStorageService.StorageIdUtils.getStorageId(TEST_DOSSIER_ID, TEST_FILE_ID, FileType.IMPORTED_REDACTIONS), importedRedactionClasspathResource.getInputStream());
// AnalyzeRequest request = prepareStorage("files/Documine/Flora/ProblemDocs/SOLICITA_VICTRATO-GOLD-II_Item 21_Mutacao_Genica (1).pdf",
// "files/Documine/Flora/ProblemDocs/SOLICITA_VICTRATO-GOLD-II_Item 21_Mutacao_Genica (1).TABLES.json");
@@ -58,7 +67,7 @@ public class DocumineFloraTest extends AbstractRedactionIntegrationTest {
System.out.println("Finished structure analysis");
AnalyzeResult result = analyzeService.analyze(request);
System.out.println("Finished analysis");
var redactionLog = redactionStorageService.getRedactionLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var componentLog = redactionStorageService.getComponentLog(TEST_DOSSIER_ID, TEST_FILE_ID);
AnnotateResponse annotateResponse = annotationService.annotate(AnnotateRequest.builder().dossierId(TEST_DOSSIER_ID).fileId(TEST_FILE_ID).build());
@@ -84,7 +93,7 @@ public class DocumineFloraTest extends AbstractRedactionIntegrationTest {
System.out.println("Finished structure analysis");
AnalyzeResult result = analyzeService.analyze(request);
System.out.println("Finished analysis");
var redactionLog = redactionStorageService.getRedactionLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
AnnotateResponse annotateResponse = annotationService.annotate(AnnotateRequest.builder().dossierId(TEST_DOSSIER_ID).fileId(TEST_FILE_ID).build());
@@ -104,14 +113,14 @@ public class DocumineFloraTest extends AbstractRedactionIntegrationTest {
// Fix In BodyTextFrameService destroys header detection in files/new/SYNGENTA_EFSA_sanitisation_GFL_v1_moreSections.pdf
// TODO unify logic
AnalyzeRequest request = uploadFileToStorage("files/Documine/Flora/402Study.pdf");
AnalyzeRequest request = uploadFileToStorage("files/Documine/Flora/402Study-ocred.pdf");
System.out.println("Start Full integration test");
analyzeDocumentStructure(LayoutParsingType.DOCUMINE, request);
System.out.println("Finished structure analysis");
AnalyzeResult result = analyzeService.analyze(request);
System.out.println("Finished analysis");
var redactionLog = redactionStorageService.getRedactionLog(TEST_DOSSIER_ID, TEST_FILE_ID);
var entityLog = redactionStorageService.getEntityLog(TEST_DOSSIER_ID, TEST_FILE_ID);
AnnotateResponse annotateResponse = annotationService.annotate(AnnotateRequest.builder().dossierId(TEST_DOSSIER_ID).fileId(TEST_FILE_ID).build());
@@ -134,7 +143,7 @@ public class DocumineFloraTest extends AbstractRedactionIntegrationTest {
@Primary
public StorageService inmemoryStorage() {
return new FileSystemBackedStorageService();
return new FileSystemBackedStorageService(ObjectMapperFactory.create());
}
}
@@ -153,10 +162,10 @@ public class DocumineFloraTest extends AbstractRedactionIntegrationTest {
loadTypeForTest();
loadNerForTest();
when(dictionaryClient.getVersion(TEST_DOSSIER_TEMPLATE_ID)).thenReturn(0L);
when(dictionaryClient.getAllTypesForDossierTemplate(TEST_DOSSIER_TEMPLATE_ID, false)).thenReturn(getTypeResponse());
when(dictionaryClient.getAllTypesForDossierTemplate(TEST_DOSSIER_TEMPLATE_ID, true)).thenReturn(getTypeResponse());
when(dictionaryClient.getVersion(TEST_DOSSIER_TEMPLATE_ID)).thenReturn(0L);
when(dictionaryClient.getAllTypesForDossier(TEST_DOSSIER_ID, false)).thenReturn(List.of(Type.builder()
when(dictionaryClient.getAllTypesForDossier(TEST_DOSSIER_ID, true)).thenReturn(List.of(Type.builder()
.id(DOSSIER_REDACTIONS_INDICATOR + ":" + TEST_DOSSIER_TEMPLATE_ID)
.type(DOSSIER_REDACTIONS_INDICATOR)
.dossierTemplateId(TEST_DOSSIER_ID)
@@ -1,128 +0,0 @@
package com.iqser.red.service.redaction.v1.server;
import static java.io.File.createTempFile;
import java.io.File;
import java.io.FileInputStream;
import java.io.FileOutputStream;
import java.io.InputStream;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.stream.Collectors;
import org.apache.commons.io.IOUtils;
import org.springframework.core.io.InputStreamResource;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.iqser.red.commons.jackson.ObjectMapperFactory;
import com.iqser.red.storage.commons.exception.StorageObjectDoesNotExist;
import com.iqser.red.storage.commons.service.StorageService;
import lombok.SneakyThrows;
public class FileSystemBackedStorageService implements StorageService {
private final Map<String, File> dataMap = new HashMap<>();
public FileSystemBackedStorageService() {
}
@SneakyThrows
@Override
public void downloadTo(String tenantId, String objectId, File destinationFile) {
var res = dataMap.get(objectId);
if (res == null) {
throw new StorageObjectDoesNotExist(new RuntimeException());
}
IOUtils.copy(new FileInputStream(res), new FileOutputStream(destinationFile));
}
@SneakyThrows
public InputStreamResource getObject(String tenantId, String objectId) {
return new InputStreamResource(new FileInputStream(dataMap.get(objectId)));
}
@Override
public void deleteObject(String tenantId, String objectId) {
dataMap.remove(objectId);
}
@Override
public boolean objectExists(String tenantId, String objectId) {
return dataMap.containsKey(objectId);
}
@Override
@SneakyThrows
public <T> void storeJSONObject(String tenantId, String objectId, T any) {
File tempFile = createTempFile("test", ".tmp");
getMapper().writeValue(new FileOutputStream(tempFile), any);
dataMap.put(objectId, tempFile);
}
private ObjectMapper getMapper() {
return ObjectMapperFactory.create();
}
@Override
@SneakyThrows
public <T> T readJSONObject(String tenantId, String objectId, Class<T> clazz) {
if (dataMap.get(objectId) == null || !dataMap.get(objectId).exists()) {
throw new StorageObjectDoesNotExist("Stored object not found");
}
return getMapper().readValue(new FileInputStream(dataMap.get(objectId)), clazz);
}
public List<String> listPaths() {
return new ArrayList<>(dataMap.keySet());
}
public List<String> listFilePaths() {
return dataMap.values().stream().map(File::getAbsolutePath).collect(Collectors.toList());
}
@Override
@SneakyThrows
public void storeObject(String tenantId, String objectId, InputStream stream) {
File tempFile = createTempFile("test", ".tmp");
try (var fileOutputStream = new FileOutputStream(tempFile)) {
IOUtils.copy(stream, fileOutputStream);
}
dataMap.put(objectId, tempFile);
}
public void clearStorage() {
this.dataMap.forEach((k, v) -> {
v.delete();
});
this.dataMap.clear();
}
}

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